ID:

dse-mir-2c

 Coordinate:

scaffold_0:10704844-10704945 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

3pUTR

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-24.4 -24.4 -24.3

Flybase annnotation

pre_miRNA [Dsec\mir-2c-RM]; utr3 [utr3_minus_7790]; miRNA [Dsec\miR-2c-RA]

No Repeatable elements found

Sense Strand Reads

CTTTGAAATAATGCCCTCCTGCAGCTGTGTGTGTGTGCGTCGACGTTACCTCGTATCTTACTTTCAATGTCATCAAAAAGGGCTGAAGAAAGATATTTCTGCATTTGAATCGTATCACAGCCAGCTTTGATGGGCATTGCAATGAGCAGCGATAGCAAAGTGTGACCCGTGACCTATGACCCCGCTGGATGCGAATGCAGAA

******************************************************..((((.((.(((((((((((((...(((((......((((((((.......)))..))))).)))))...)))))).))))))).)))))).....*************************************************** 		Read size # Mismatch Hit Count Total Norm Total V114

embryo

 V115

head

 M054

female body

 V113

male body
..................................................................................................................TCACAGCCAGCTTTGATGGGCA.................................................................. 22 0 1 3047.00 3047 2471 490 75 11
................................................................................................................TATCACAGCCAGCTTTGATGAGCA.................................................................. 24 1 4 931.00 3724 1660 1346 94 624
................................................................................................................TATCACAGCCAGCTTTGATG...................................................................... 20 0 4 879.50 3518 87 2288 1060 83
..................................................................................................................TCACAGCCAGCTTTGATGGG.................................................................... 20 0 1 788.00 788 118 608 57 5
..................................................................................................................TCACAGCCAGCTTTGATGGGC................................................................... 21 0 1 520.00 520 172 306 41 1
..................................................................................................................TCACAGCCAGCTTTGATGGGA................................................................... 21 1 1 308.00 308 3 297 2 6
................................................................................................................TATCACAGCCAGCTTTGAT....................................................................... 19 0 4 287.00 1148 24 993 127 4
..................................................................................................................TCACAGCCAGCTTTGATGAGCA.................................................................. 22 1 4 287.00 1148 181 779 13 175
..................................................................................................................TCACAGCCAGCTTTGATGGGCT.................................................................. 22 1 4 254.50 1018 279 421 12 306
................................................................................................................TATCACAGCCAGCTTTGAGGGG.................................................................... 22 1 3 249.67 749 113 266 300 70
.....................................................................TCATCAAAAAGGGCTGAAGAAAGAT............................................................................................................ 25 0 1 225.00 225 181 37 2 5
.....................................................................TCATCAAAAAGGGCTGAAG.................................................................................................................. 19 0 1 225.00 225 61 139 17 8
................................................................................................................TATCACAGCCAGCTTTGATGGGCT.................................................................. 24 1 4 204.75 819 496 198 60 65
..................................................................................................................TCACAGCCAGCTTTGATGGGCAT................................................................. 23 0 1 156.00 156 98 55 2 1
.....................................................................TCATCAAAAAGGGCTGAAGAAAGA............................................................................................................. 24 0 1 143.00 143 121 22 0 0
..................................................................................................................TCACAGCCAGCTTTGATGGGT................................................................... 21 1 1 129.00 129 29 99 0 1
..................................................................................................................TCACAGCCAGCTTTGATG...................................................................... 18 0 4 126.00 504 13 470 21 0
................................................................................................................TATCACAGCCAGCTTTGA........................................................................ 18 0 6 115.33 692 108 565 19 0
................................................................................................................TATCACAGCCAGCTTTGATGGG.................................................................... 22 0 1 93.00 93 16 18 58 1
..................................................................................................................TCACAGCCAGCTTTGATGT..................................................................... 19 1 4 90.50 362 0 355 7 0
................................................................................................................TATCACAGCCAGCTTTGAGGGGC................................................................... 23 1 3 83.33 250 116 39 83 12
................................................................................................................TATCACAGCCAGCTTTGATGAGCAT................................................................. 25 1 2 79.00 158 36 68 3 51
................................................................................................................TATCACAGCCAGCTTTGATGGGC................................................................... 23 0 1 74.00 74 23 14 37 0
..................................................................................................................TCACAGCCAGCTTTGATGGGCAA................................................................. 23 1 1 60.00 60 35 24 0 1
.....................................................................TCATCAAAAAGGGCTGAAGA................................................................................................................. 20 0 1 60.00 60 18 26 9 7
................................................................................................................TATCACAGCCAGCTTTGATGT..................................................................... 21 1 4 53.75 215 1 179 17 18
.....................................................................TCATCAAAAAGGGCTGAAGAAAGATA........................................................................................................... 26 0 1 49.00 49 44 4 0 1
.....................................................................TCATCAAAAAGGGCTGAAGAAAG.............................................................................................................. 23 0 1 47.00 47 42 2 2 1
.....................................................................TCATCAAAAAGGGCTGAAGAAA............................................................................................................... 22 0 1 47.00 47 18 21 3 5
....................................................................................................................ACAGCCAGCTTTGATGGGCA.................................................................. 20 0 1 46.00 46 34 12 0 0
................................................................................................................TATCACAGCCAGCTTTGATGGGCA.................................................................. 24 0 1 40.00 40 33 5 0 2
..................................................................................................................TCACAGCCAGCTTTGATGGGCTT................................................................. 23 1 2 37.50 75 6 31 1 37
................................................................................................................TATCACAGCCAGCTTTGAGAG..................................................................... 21 2 3 34.00 102 16 42 37 7
................................................................................................................TATCACAGCCAGCTTTGAGGG..................................................................... 21 1 3 31.67 95 5 34 52 4
................................................................................................................TATCACAGCCAGCTTTGAGCG..................................................................... 21 2 3 31.67 95 37 40 12 6
..................................................................................................................TCACAGCCAGCTTTGGTGGGC................................................................... 21 1 1 31.00 31 1 30 0 0
..................................................................................................................TCACAGCCAGCTTTGGTGGGCT.................................................................. 22 2 4 30.50 122 0 116 0 6
................................................................................................................TATCACAGCCAGCTTTGATGG..................................................................... 21 0 1 29.00 29 0 4 25 0
.....................................................................TCATCAAAAAGGGCTGAAGAA................................................................................................................ 21 0 1 25.00 25 6 14 4 1
..................................................................................................................TCACAGCCAGCTTTGATGAGCAT................................................................. 23 1 2 24.50 49 3 32 0 14
................................................................................................................TATCACAGCCAGCTTTGATGGGCTT................................................................. 25 1 2 22.00 44 22 13 1 8
..................................................................................................................TCACAGCCAGCTTTGATGGGAA.................................................................. 22 1 1 19.00 19 0 19 0 0
................................................................................................................TATCACAGCCAGCTTTGATT...................................................................... 20 1 4 19.00 76 0 52 19 5
....................................................................................................................ACAGCCAGCTTTGATGGG.................................................................... 18 0 1 18.00 18 5 13 0 0
..................................................................................................................TCACAGCCAGTTTTGATGGGCA.................................................................. 22 1 1 17.00 17 17 0 0 0
................................................................................................................TATCACAGCCAGCTTTGAA....................................................................... 19 1 6 15.83 95 0 84 10 1
..................................................................................................................TCACAGCCAGCTTTGATAGCTA.................................................................. 22 3 2 15.50 31 22 5 0 4
..................................................................................................................TCACAGCTAGCTTTGATGGGCA.................................................................. 22 1 1 15.00 15 15 0 0 0
.................................................................................................................ATCACAGCCAGCTTTGATG...................................................................... 19 0 4 13.50 54 0 10 44 0
..................................................................................................................TCACAGCCAGCTTTGATGGGCTAT................................................................ 24 2 3 13.33 40 12 12 0 16
...................................................................................................................CACAGCCAGCTTTGATGGGCA.................................................................. 21 0 1 13.00 13 7 2 4 0
..................................................................................................................TCACAGCCAGCTTTGATGGA.................................................................... 20 1 1 13.00 13 0 11 2 0
................................................................................................................TATCACAGCCAGCTTTGAGAGC.................................................................... 22 3 4 12.75 51 25 12 12 2
..................................................................................................................TCACAGCCAGCTTTGATGG..................................................................... 19 0 1 11.00 11 0 1 10 0
..................................................................................................................TCACAGCCAGCTTTGATT...................................................................... 18 1 4 10.75 43 0 43 0 0
..................................................................................................................TCACAGCCAGCTTTGATGAGAA.................................................................. 22 2 4 10.00 40 0 40 0 0
..................................................................................................................TCACAGCCAGCTTTGATGGGCAC................................................................. 23 1 1 10.00 10 8 1 1 0
..................................................................................................................TCACAGCCAGCTTTGGTGGG.................................................................... 20 1 1 10.00 10 0 10 0 0
................................................................................................................TATCACAGCCAGCTTTGAGGGT.................................................................... 22 2 3 9.67 29 9 9 1 10
..................................................................................................................TCACAGTCAGCTTTGATGGGCA.................................................................. 22 1 1 9.00 9 9 0 0 0
................................................................................................................TATCACAGCCAGCTTTGAGCGT.................................................................... 22 3 3 8.33 25 11 9 2 3
..................................................................................................................TCACAGCCAGCTTTGATGGGTA.................................................................. 22 1 1 8.00 8 6 2 0 0
....................................................................................................................ACAGCCAGCTTTGATGGGC................................................................... 19 0 1 8.00 8 3 5 0 0
..................................................................................................................TCACAGCCAGCTTTGATGGGCG.................................................................. 22 1 1 7.00 7 3 3 0 1
..................................................................................................................CCACAGCCAGCTTTGATGGGCA.................................................................. 22 1 1 7.00 7 7 0 0 0
..................................................................................................................TCACAGCCAGCTTTGATGGGTT.................................................................. 22 2 4 7.00 28 26 2 0 0
................................................................................................................TATCACAGCCAGCTTTGATAGCT................................................................... 23 3 2 7.00 14 10 2 1 1
................................................................................................................TATCACAGCCAGCTTTGACAGC.................................................................... 22 3 1 7.00 7 2 2 2 1
................................................................................................................TATCACAGCCAGCTTTGATGCG.................................................................... 22 1 4 6.75 27 7 14 0 6
................................................................................................................TATCACAGCCAGCTTTGT........................................................................ 18 1 6 6.33 38 0 38 0 0
................................................................................................................TATCACAGCCAGCTTTGAGGGCG................................................................... 23 3 3 6.33 19 14 3 0 2
..................................................................................................................TCACAGCCAGCTTTGGTGGGCA.................................................................. 22 1 1 6.00 6 6 0 0 0
................................................................................................................TATCACAGCCAGCTTTGATAGC.................................................................... 22 2 1 6.00 6 3 2 1 0
..................................................................................................................TCACAGCCAGATTTGATGGGCA.................................................................. 22 1 1 6.00 6 3 1 2 0
..................................................................................................................TCACAGCCAGCTTTGATGGGCC.................................................................. 22 1 1 6.00 6 6 0 0 0
..................................................................................................................TCACAGCCAGCTTTGATGGGCTTT................................................................ 24 1 1 6.00 6 0 4 0 2
.................................................................................................................ATCACAGCCAGCTTTGATGGG.................................................................... 21 0 1 6.00 6 2 2 2 0
................................................................................................................TATCACAGCCAGCTTTGATGGGT................................................................... 23 1 1 6.00 6 1 4 1 0
.................................................................................................................ATCACAGCCAGCTTTGATGGGT................................................................... 22 1 1 6.00 6 5 1 0 0
..................................................................................................................TCACGGCCAGCTTTGATGGGCA.................................................................. 22 1 1 5.00 5 5 0 0 0
..................................................................................................................TCACAACCAGCTTTGATGAGCA.................................................................. 22 2 4 5.00 20 0 20 0 0
................................................................................................................TATCACAGCCAGCTTTGATGAGAA.................................................................. 24 2 4 5.00 20 3 8 7 2
.................................................................................................................CTCACAGCCAGCTTTGATGGGCA.................................................................. 23 1 1 5.00 5 5 0 0 0
..................................................................................................................TCACAGCCAGCCTTGATGGGCA.................................................................. 22 1 1 5.00 5 4 1 0 0
...................................................................................................................CACAGCCAGCTTTGATGGG.................................................................... 19 0 1 5.00 5 0 2 3 0
.....................................................................TCATCAAAAAGGGCTGAA................................................................................................................... 18 0 1 5.00 5 5 0 0 0
..................................................................................................................TCACAGCCAACTTTGATGGG.................................................................... 20 1 1 5.00 5 0 5 0 0
..................................................................................................................TCACAGCCAGCTTTGATGCG.................................................................... 20 1 4 5.00 20 3 11 0 6
..................................................................................................................TTACAGCCAGCTTTGATGGGCA.................................................................. 22 1 1 5.00 5 5 0 0 0
..................................................................................................................TCACAGCCAGCTTTGGTGAGCA.................................................................. 22 2 4 4.75 19 0 17 0 2
................................................................................................................TATCACAGCCAGCTTTGATA...................................................................... 20 1 4 4.75 19 1 11 5 2
................................................................................................................TATCACAGCCAGCTTAGGAG...................................................................... 20 3 10 4.70 47 7 27 9 4
................................................................................................................TATCACAGCCAGCTTTGAAA...................................................................... 20 2 9 4.56 41 2 33 3 3
................................................................................................................TATCACAGCCAGCTTTGGAGCG.................................................................... 22 3 6 4.50 27 21 6 0 0
.................................................................................................................ATCACAGCCAGCTTTGATGAGCA.................................................................. 23 1 4 4.50 18 3 6 8 1
................................................................................................................TATCACAGCCAGCTTTGAGGGGT................................................................... 23 2 3 4.33 13 1 6 5 1
...................................................................................................................CACAGCCAGCTTTGATGGGC................................................................... 20 0 1 4.00 4 1 1 2 0
..................................................................................................................TCATAGCCAGCTTTGATGGGCA.................................................................. 22 1 1 4.00 4 4 0 0 0
................................................................................................................TATCACAGCCAGCTTTGAGGGGCA.................................................................. 24 1 1 4.00 4 2 2 0 0
..................................................................................................................TCACAGCCAGCTTTGATCGGCA.................................................................. 22 1 1 4.00 4 4 0 0 0
..................................................................................................................TCACAGCCAGCTTTGATAGC.................................................................... 20 2 1 4.00 4 0 3 0 1
..................................................................................................................TCACAGCCAGCTTTGATGGT.................................................................... 20 1 1 4.00 4 1 3 0 0
..................................................................................................................TCACAGCCAGCTTTGGTGGGA................................................................... 21 2 1 4.00 4 0 4 0 0
..................................................................................................................TCACAGCCAGCTTTGATA...................................................................... 18 1 4 3.75 15 0 15 0 0
....................................................................................................................ACAGCCAGCTTTGATGAGCA.................................................................. 20 1 4 3.75 15 10 5 0 0
..................................................................................................................TCACAGCCAGCTTTGATGACTA.................................................................. 22 3 5 3.60 18 12 5 1 0
................................................................................................................TATCACAGCCAGCTTTGAAGAGCA.................................................................. 24 2 6 3.50 21 1 5 0 15
....................................................................................................................ACAGCCAGCTTTGATGGGCT.................................................................. 20 1 4 3.50 14 10 4 0 0
................................................................................................................TATCACAGCCAGCTTTGATGAGCAC................................................................. 25 2 4 3.25 13 7 6 0 0
................................................................................................................TATCACAGCCAGCTTTGATGGGA................................................................... 23 1 1 3.00 3 1 1 1 0
..................................................................................................................TCACAGCCAGCTTTGATGGCA................................................................... 21 2 1 3.00 3 2 1 0 0
..................................................................................................................TCACAGCCAGCTTTGATGCGCTTT................................................................ 24 2 2 3.00 6 0 1 0 5
................................................................................................................TATCACAGCCAGCTTTGATGAGCATT................................................................ 26 1 1 3.00 3 1 0 0 2
..................................................................................................................CCACAGCCAGCTTTGATGGGC................................................................... 21 1 1 3.00 3 2 1 0 0
................................................................................................................TATCACAGCCAGCTTTGATGGGCTTT................................................................ 26 1 1 3.00 3 0 3 0 0
................................................................................................................TATCACAGCCAGCTTTGCTG...................................................................... 20 1 4 3.00 12 0 3 9 0
.....................................................................TCATCAAAAAGGGCTGAAGAAGAT............................................................................................................. 24 3 1 3.00 3 3 0 0 0
..................................................................................................................TCACAGCCAGCTTTGATGGGAAA................................................................. 23 2 1 3.00 3 0 3 0 0
.................................................................................................................ATCACAGCCAGCTTTGATGGGC................................................................... 22 0 1 3.00 3 2 1 0 0
................................................................................................................TATCACAGCCAGCTTTGATAG..................................................................... 21 1 1 3.00 3 0 1 2 0
..................................................................................................................TCACAGCTAGCTTTGATGGG.................................................................... 20 1 1 3.00 3 1 2 0 0
..................................................................................................................TCACAGCCAGCTTTGATGGCT................................................................... 21 2 1 3.00 3 1 1 0 1
..................................................................................................................TCACAGCCAGCTTTGATCGGC................................................................... 21 1 1 3.00 3 2 0 1 0
..................................................................................................................TCACACCCAGCTTTGATGGGCA.................................................................. 22 1 1 3.00 3 3 0 0 0
..................................................................................................................TCACAGCCAGCTTTCATGGGC................................................................... 21 1 1 3.00 3 1 2 0 0
..................................................................................................................TCACAGCCAGCTTTAATGGGCA.................................................................. 22 1 1 3.00 3 3 0 0 0
..................................................................................................................TCACAGCCAGCTTTGATTGGCA.................................................................. 22 1 1 3.00 3 1 2 0 0
..................................................................................................................TCACAGCCGGCTTTGATGGGCA.................................................................. 22 1 1 3.00 3 2 1 0 0
..................................................................................................................TCACAGCCAGCTTTGACGGGCA.................................................................. 22 1 1 3.00 3 2 1 0 0
..................................................................................................................TCACAGCCAGCTTTGATGGGCAAA................................................................ 24 2 1 3.00 3 3 0 0 0
..................................................................................................................TCACATCCAGCTTTGATGGGCA.................................................................. 22 1 1 3.00 3 2 1 0 0
................................................................................................................TATCACAGCCAGCCTTGATGAGCA.................................................................. 24 2 4 3.00 12 8 2 0 2
..................................................................................................................TCACAGCCAGCTTTGATGCGC................................................................... 21 1 4 3.00 12 4 5 0 3
..................................................................................................................TCACAGCCAGCTTTGATGAGCATT................................................................ 24 1 1 3.00 3 0 3 0 0
..................................................................................................................TCACAGCCAGCTTTGATGCGCA.................................................................. 22 1 1 3.00 3 0 1 0 2
...............................................................................................TTTCTGCATTTGAATCGTA........................................................................................ 19 0 1 3.00 3 2 1 0 0
..................................................................................................................TCACAGCCAGCTTTGATGGCTA.................................................................. 22 2 1 3.00 3 3 0 0 0
................................................................................................................TATCACAGCCAGCTTTGGTGGGCT.................................................................. 24 2 4 2.75 11 2 8 0 1
...............................................................................................................GTATCACAGCCAGCTTTGATGAG.................................................................... 23 1 4 2.75 11 0 0 11 0
...............................................................................................................GTATCACAGCCAGCTTTGATGAGC................................................................... 24 1 4 2.75 11 0 0 11 0
................................................................................................................TATCACAGCCAGCTTTGACGAGCA.................................................................. 24 2 6 2.67 16 1 2 0 13
................................................................................................................TATCACAGCCAGCTTTTATG...................................................................... 20 1 4 2.50 10 0 7 3 0
................................................................................................................TATCACAGCCAGCTTTGGGAG..................................................................... 21 3 4 2.50 10 1 7 2 0
................................................................................................................TATCACAGCCAGCTTTGAGGGGA................................................................... 23 2 3 2.33 7 0 1 4 2
..................................................................................................................TCACAGCCAGCTTTGATGTG.................................................................... 20 1 4 2.25 9 1 5 1 2
................................................................................................................TATCACGGCCAGCTTTGATG...................................................................... 20 1 4 2.25 9 0 8 1 0
..................................................................................................................TCACAGCCAGCTTTGATGGTCA.................................................................. 22 1 1 2.00 2 2 0 0 0
..................................................................................................................TCACAGCCAACTTTGATGGGCA.................................................................. 22 1 1 2.00 2 1 1 0 0
.....................................................................TCATCAAAAAGGGCTGAAGAAGA.............................................................................................................. 23 2 1 2.00 2 2 0 0 0
..................................................................................................................TCACAGCTAGCTTTGATGGGC................................................................... 21 1 1 2.00 2 1 1 0 0
..................................................................................................................TCACAACCAGCTTTGATGGGCA.................................................................. 22 1 1 2.00 2 1 1 0 0
..................................................................................................................TCACAGCCAGCTTTGATGGACA.................................................................. 22 1 1 2.00 2 1 1 0 0
..................................................................................................................TCACAGCCAGTTTTGATGGG.................................................................... 20 1 1 2.00 2 1 1 0 0
..................................................................................................................TCATAGCCAGCTTTGATGGGC................................................................... 21 1 1 2.00 2 2 0 0 0
..................................................................................................................TCGCAGCCAGCTTTGATGGGCA.................................................................. 22 1 1 2.00 2 2 0 0 0
................................................................................................................TATCACAGCCAGCTTTGATGCGCA.................................................................. 24 1 1 2.00 2 0 1 0 1
..................................................................................................................TCACAGCCAGCTTTGATGTT.................................................................... 20 2 4 2.00 8 0 8 0 0
................................................................................................................TATCACAGCCAGCTTTGATGAGTA.................................................................. 24 2 4 2.00 8 3 3 0 2
................................................................................................................TATCACAGCCAGCTTTGATAGCTA.................................................................. 24 3 1 2.00 2 2 0 0 0
..................................................................................................................TCACAGACAGCTTTGATGGGCAT................................................................. 23 1 1 2.00 2 1 1 0 0
................................................................................................................TATCACAGACAGCTTTGATG...................................................................... 20 1 4 2.00 8 0 3 5 0
.................................................................................................................ATCACAGCCAGCTTTGATGGGA................................................................... 22 1 1 2.00 2 0 1 1 0
...................................................................................................................CACAGCCAGCTTTGATGGGCAA................................................................. 22 1 1 2.00 2 2 0 0 0
..................................................................................................................TCACAGCCAGCTTTGATAGCTAT................................................................. 23 3 1 2.00 2 0 2 0 0
..................................................................................................................TGACAGCCAGCTTTGATGGG.................................................................... 20 1 1 2.00 2 1 1 0 0
................................................................................................................TATCACAGCCAGCTTTGATGAGTAT................................................................. 25 2 2 2.00 4 0 0 0 4
..................................................................................................................ACACAGCCAGCTTTGATGGG.................................................................... 20 1 1 2.00 2 1 1 0 0
..................................................................................................................TCACAGTCAGCTTTGATGGGCAA................................................................. 23 2 1 2.00 2 2 0 0 0
..................................................................................................................TCACAACCAGCTTTGATGAGCAT................................................................. 23 2 2 2.00 4 0 4 0 0
....................................................................................................................TCAGCCAGCTTTGATGGGCA.................................................................. 20 1 1 2.00 2 2 0 0 0
..................................................................................................................TCACAGCCAGCTTTGATTGGC................................................................... 21 1 1 2.00 2 1 1 0 0
..................................................................................................................TTACAGCCAGCTTTGATGGG.................................................................... 20 1 1 2.00 2 1 1 0 0
....................................................................................................................ACAGCCAGCTTTGAGGGG.................................................................... 18 1 3 2.00 6 0 6 0 0
................................................................................................................TATCACAGCCAGCTTTGATGGGCAA................................................................. 25 1 1 2.00 2 1 1 0 0
..................................................................................................................TCACAGCCAGCTTTGATGTA.................................................................... 20 2 4 2.00 8 1 7 0 0
....................................................................................................................ACAGCCAGCTTTGATGAGCAT................................................................. 21 1 2 2.00 4 0 4 0 0
.........................................................................CAAAAAGGGCTGAAGAAAGATA........................................................................................................... 22 0 1 2.00 2 2 0 0 0
..................................................................................................................TCACCGCCAGCTTTGATGGGCA.................................................................. 22 1 1 2.00 2 1 1 0 0
....................................................................................................................ACAGTCAGCTTTGATGGGCA.................................................................. 20 1 1 2.00 2 2 0 0 0
.....................................................................CCATCAAAAAGGGCTGAAG.................................................................................................................. 19 1 1 2.00 2 1 1 0 0
..................................................................................................................TCACAGCCTGCTTTGATGGGCA.................................................................. 22 1 1 2.00 2 2 0 0 0
......................................................................TCTCAAAAAGGGCTGAAGAAAGAT............................................................................................................ 24 2 1 2.00 2 2 0 0 0
..................................................................................................................TCACAGCCAGCTATGATGGGCA.................................................................. 22 1 1 2.00 2 2 0 0 0
..................................................................................................................TTACAGCCAGCTTTGATGGGC................................................................... 21 1 1 2.00 2 1 0 1 0
.....................................................................TCATCAAAAAGGGCCGAAGAAAGA............................................................................................................. 24 1 1 2.00 2 2 0 0 0
..................................................................................................................TCACAGCCAGCTTTGATGAGCCTT................................................................ 24 2 3 2.00 6 0 4 0 2
................................................................................................................TATCACAGCCAGCTTTGACGGG.................................................................... 22 1 1 2.00 2 0 1 1 0
................................................................................................................TATCACAGCCAGCTTTGGTGGGC................................................................... 23 1 1 2.00 2 0 1 0 1
......................................................................TCTCAAAAAGGGCTGAAGAAAGA............................................................................................................. 23 2 1 2.00 2 1 1 0 0
..................................................................................................................TCACAGCCCGCTTTGATGGGC................................................................... 21 1 1 2.00 2 0 0 2 0
................................................................................................................TATCACATCCAGCTTTGATG...................................................................... 20 1 4 2.00 8 0 7 1 0
.....................................................................TCATCAAAAAGGGCTGAAGAAAGATAT.......................................................................................................... 27 0 1 2.00 2 2 0 0 0
..................................................................................................................TCACAGCCAGCTTTGATGGCCA.................................................................. 22 1 1 2.00 2 2 0 0 0
.....................................................................TCATCAAAAAGGGCTGAAGAAAGATT........................................................................................................... 26 1 1 2.00 2 2 0 0 0
..................................................................................................................TCACAGACAGCTTTGATGGGC................................................................... 21 1 1 2.00 2 0 2 0 0
..................................................................................................................TCACAGCCAGCTTTGATGAGTAT................................................................. 23 2 2 2.00 4 0 3 0 1
.....................................................................TCATTAAAAAGGGCTGAAGAAAGATA........................................................................................................... 26 1 1 2.00 2 2 0 0 0
.....................................................................TCATCAAAAAGGGCTGAAGAAAGAA............................................................................................................ 25 1 1 2.00 2 1 1 0 0
..................................................................................................................TCACAACCAGCTTTGATGGG.................................................................... 20 1 1 2.00 2 0 2 0 0
......................................................................CATCAAAAAGGGCTGAAGAAAGAT............................................................................................................ 24 0 1 2.00 2 1 1 0 0
..................................................................................................................TCACAGCCAGCTTTGATAGGCA.................................................................. 22 1 1 2.00 2 0 2 0 0
..................................................................................................................TCACAGCCAGCTTTGGTGGGCTT................................................................. 23 2 2 2.00 4 0 4 0 0
................................................................................................................TATCACCGCCAGCTTTGATG...................................................................... 20 1 4 1.75 7 0 0 7 0
................................................................................................................TATCACAACCAGCTTTGATGAGCA.................................................................. 24 2 4 1.75 7 2 5 0 0
................................................................................................................TATCACAGCCAGCTTTGATGTT.................................................................... 22 2 4 1.75 7 1 5 1 0
................................................................................................................TATCGCAGCCAGCTTTGATGAGCA.................................................................. 24 2 4 1.75 7 1 3 0 3
.................................................................................................................ATCACAGCCAGCTTTGAGGGG.................................................................... 21 1 3 1.67 5 0 1 4 0
................................................................................................................TATCACAGCCAGCTTTTAT....................................................................... 19 1 4 1.50 6 0 6 0 0
................................................................................................................TATCACATCCAGCTTTGATGAGCA.................................................................. 24 2 4 1.50 6 2 2 0 2
................................................................................................................TATCACAGCCAGCTTTGAAG...................................................................... 20 1 6 1.50 9 0 7 2 0
..................................................................................................................TCACAGCCAGCTTTGATGTGCTTT................................................................ 24 2 2 1.50 3 0 0 0 3
................................................................................................................TACCACAGCCAGCTTTGATG...................................................................... 20 1 4 1.50 6 0 2 4 0
.....................................................................TCATCAAAAAGGGCTGAAA.................................................................................................................. 19 1 2 1.50 3 0 2 1 0
................................................................................................................TATAACAGCCAGCTTTGATG...................................................................... 20 1 4 1.50 6 0 3 3 0
................................................................................................................TATCACAGCCAGCTTTGACG...................................................................... 20 1 6 1.50 9 0 6 2 1
................................................................................................................TATCACAGCCAGCTTTGATGACCA.................................................................. 24 2 4 1.50 6 3 2 0 1
..................................................................................................................TCACAGCCAGCTTTGATGTGC................................................................... 21 1 4 1.50 6 0 2 0 4
................................................................................................................TATCACAGCCAGCTTTGTT....................................................................... 19 1 4 1.50 6 0 6 0 0
................................................................................................................TATCACAGCCAGCTTTGATGTA.................................................................... 22 2 4 1.50 6 0 3 3 0
................................................................................................................TATCACAGCCCGCTTTGAT....................................................................... 19 1 4 1.50 6 0 5 1 0
................................................................................................................TATCACAGCTAGCTTTGATGAGCA.................................................................. 24 2 4 1.50 6 6 0 0 0
................................................................................................................TATCACAGCCAGCTTTGATGTG.................................................................... 22 1 4 1.50 6 2 3 1 0
...............................................................................................................CTATCACAGCCAGCTTTGATG...................................................................... 21 1 4 1.50 6 0 3 3 0
................................................................................................................TATCACAGCCAGCTTTGTTT...................................................................... 20 2 5 1.40 7 0 1 1 5
................................................................................................................TATCACAGCCAGCTTTGGAG...................................................................... 20 2 6 1.33 8 4 3 1 0
................................................................................................................TATCACAGCCAGCTTTGAGGGC.................................................................... 22 2 3 1.33 4 3 0 1 0
................................................................................................................TATCACAGCCAGCTTTGAGGGTT................................................................... 23 3 3 1.33 4 1 0 0 3
................................................................................................................TATCACAGCCAGCTTTGATGAGCCTT................................................................ 26 2 3 1.33 4 3 1 0 0
................................................................................................................TATCACAGCCAGCTTTGGAGC..................................................................... 21 3 10 1.30 13 10 2 1 0
................................................................................................................TATTACAGCCAGCTTTGATGAGCA.................................................................. 24 2 4 1.25 5 4 1 0 0
................................................................................................................TATCACAGCCAGCTTTGATGAGGA.................................................................. 24 2 4 1.25 5 0 4 1 0
................................................................................................................TATCACAACCAGCTTTGATG...................................................................... 20 1 4 1.25 5 0 5 0 0
................................................................................................................TATCACAGCCAGCTTTGATGCT.................................................................... 22 2 4 1.25 5 5 0 0 0
.................................................................................................................ATCACAGCCAGCTTTGATGGGCT.................................................................. 23 1 4 1.25 5 1 3 1 0
..................................................................................................................TCACACCCAGCTTTGATGAGCA.................................................................. 22 2 4 1.25 5 0 5 0 0
................................................................................................................TATCACAGCCATCTTTGATGAGCA.................................................................. 24 2 4 1.25 5 2 2 0 1
..................................................................................................................TCACAGCCAGCTTTGATGGGAT.................................................................. 22 2 4 1.25 5 1 4 0 0
................................................................................................................TATCACAGCCAGCTTTGATGCGC................................................................... 23 1 4 1.25 5 3 1 1 0
................................................................................................................TATCACAGCCAGCTTTGACGT..................................................................... 21 2 6 1.17 7 0 3 0 4
................................................................................................................TATCACAGCCCGCTTTGATGGGC................................................................... 23 1 1 1.00 1 0 0 1 0
..................................................................................................................TAACAGCCAGCTTTGATGGGA................................................................... 21 2 1 1.00 1 0 1 0 0
..................................................................................................................TCACAGCCGGCTTTGATGGG.................................................................... 20 1 1 1.00 1 0 1 0 0
.....................................................................TTATCAAAAAGGGCTGAAGAAACATA........................................................................................................... 26 2 1 1.00 1 1 0 0 0
................................................................................................................CATCACAGCCAGCTTTGATGAGCA.................................................................. 24 2 4 1.00 4 4 0 0 0
................................................................................................................TATCACAGCTAGCTTTGATG...................................................................... 20 1 4 1.00 4 0 2 2 0
................................................................................................................TATCACAGCCAGCCTTGATGGG.................................................................... 22 1 1 1.00 1 1 0 0 0
..................................................................................................................TAACAGCCAGCTTTGATGGGCAT................................................................. 23 1 1 1.00 1 1 0 0 0
..................................................................................................................TCTCAACCAGCTTTGATGGG.................................................................... 20 2 1 1.00 1 0 1 0 0
..................................................................................................................TCATAGCCAGCTTTGATGGGT................................................................... 21 2 1 1.00 1 1 0 0 0
..................................................................................................................TCACAGCCAGCTTTGATTGG.................................................................... 20 1 1 1.00 1 0 1 0 0
................................................................................................................TATCACAGCCCGCTTTTATGCGCA.................................................................. 24 3 1 1.00 1 0 1 0 0
..................................................................................................................TCACAGTCAGCTTTGATGGGCAT................................................................. 23 1 1 1.00 1 1 0 0 0
..................................................................................................................TCACAGCCACCTTTGATGGGA................................................................... 21 2 1 1.00 1 0 1 0 0
.....................................................................TCATCAAAAAGGGCTGAAGAATGAT............................................................................................................ 25 1 1 1.00 1 1 0 0 0
................................................................................................................TATCACAGCCAGCTTGGAGCG..................................................................... 21 3 5 1.00 5 5 0 0 0
.....................................................................TCGTCAAAAAGGGCTGAAGAAAGAT............................................................................................................ 25 1 1 1.00 1 1 0 0 0
................................................................................................................TATCACAGCCAGCTTTGGTGGGA................................................................... 23 2 1 1.00 1 0 1 0 0
................................................................................................................TATCACAGCCAGCTTTGGTGGGCTT................................................................. 25 2 2 1.00 2 0 2 0 0
....................................................................................................................ACAGCCAGCTTTGATGGGAA.................................................................. 20 1 1 1.00 1 0 1 0 0
................................................................................................................TATCACAGCCAGCTTTGACGGGC................................................................... 23 1 1 1.00 1 1 0 0 0
................................................................................................................TATCACAGCCAGCTTTGATGGGCTTTT............................................................... 27 2 1 1.00 1 0 1 0 0
..................................................................................................................TCACAGCCAGCTTTGATTT..................................................................... 19 2 6 1.00 6 0 6 0 0
..................................................................................................................TCACAGCCAGCATTGATGGGCA.................................................................. 22 1 1 1.00 1 1 0 0 0
.....................................................................TCATCAAAAGGGGCTGAAGAAA............................................................................................................... 22 1 1 1.00 1 1 0 0 0
.....................................................................TCATCAAAAAGGGTTGAAG.................................................................................................................. 19 1 1 1.00 1 0 1 0 0
..................................................................................................................TCACAGCCAGCCTTGATGGGA................................................................... 21 2 1 1.00 1 0 1 0 0
................................................................................................................TATCACAGCCAGCTTTGAGGGCGA.................................................................. 24 3 1 1.00 1 0 1 0 0
................................................................................................................TGTCACAGCCAGCTTTGAGGGG.................................................................... 22 2 3 1.00 3 0 2 1 0
..................................................................................................................TCACAGCCAGCTCTGATGGGC................................................................... 21 1 1 1.00 1 0 1 0 0
................................................................................................................TATCACAGCCAGCTTTGAGGGGCAT................................................................. 25 1 1 1.00 1 1 0 0 0
..................................................................................................................TCACAGAAAGCTTTGATGGGCA.................................................................. 22 2 1 1.00 1 0 1 0 0
..................................................................................................................TCACAGCCGGCTTTGATGGGA................................................................... 21 2 1 1.00 1 0 1 0 0
................................................................................................................TATCACAGCCAGCCTTGATG...................................................................... 20 1 4 1.00 4 1 2 1 0
..................................................................................................................TCACAGCCGGCTTTGGTGGGCA.................................................................. 22 2 1 1.00 1 0 1 0 0
..................................................................................................................TCACAGCCAGCTTTGACGGGCAA................................................................. 23 2 1 1.00 1 1 0 0 0
.....................................................................TCATCAAAAAGGGCTGAAGACAGAT............................................................................................................ 25 1 1 1.00 1 1 0 0 0
..................................................................................................................TCACGGCCAGCTTTGATGGGC................................................................... 21 1 1 1.00 1 1 0 0 0
.....................................................................TCATCAAAAAGGGCTGAAGAAAA.............................................................................................................. 23 1 1 1.00 1 0 1 0 0
..................................................................................................................TCACAGCCAGCTTTGCTGGGA................................................................... 21 2 1 1.00 1 0 1 0 0
..................................................................................................................TCACAGCCAGCTTTGGTGG..................................................................... 19 1 1 1.00 1 0 1 0 0
..................................................................................................................TCACAGCCAGCTTTAATGGG.................................................................... 20 1 1 1.00 1 0 1 0 0
..................................................................................................................TCACAGCCATCTTTGATGGGA................................................................... 21 2 1 1.00 1 0 1 0 0
..................................................................................................................TCACAGCCAGTTTTGATGGGCAA................................................................. 23 2 1 1.00 1 1 0 0 0
................................................................................................................TATCACAGACAGCTTTGATGGGC................................................................... 23 1 1 1.00 1 0 0 1 0
....................................................................................................................ACAGGCAGCTTTGATGGGCC.................................................................. 20 2 1 1.00 1 0 1 0 0
..................................................................................................................TCACAGCCAGCTTTGATAGCT................................................................... 21 3 4 1.00 4 1 2 0 1
................................................................................................................TATTACAGCCAGCTTTGATGGGCA.................................................................. 24 1 1 1.00 1 1 0 0 0
..................................................................................................................TCACAGCCAGCCTTGATGGGCAT................................................................. 23 1 1 1.00 1 1 0 0 0
................................................................................................................TATCACACCCAGCTTTGAGGGGC................................................................... 23 2 3 1.00 3 3 0 0 0
................................................................................................................TATCACCGCCAGCTTTGATGGG.................................................................... 22 1 1 1.00 1 1 0 0 0
................................................................................................................CATCACAGCCAGCTTTGATGG..................................................................... 21 1 1 1.00 1 0 0 1 0
..................................................................................................................TCACAGCCAGCTTTGATGGC.................................................................... 20 1 1 1.00 1 0 1 0 0
..................................................................................................................TCACAGCTAGCTTTGATGGGT................................................................... 21 2 1 1.00 1 1 0 0 0
....................................................................................................................TCAGCCAGTTTTGATGGGCA.................................................................. 20 2 1 1.00 1 1 0 0 0
..................................................................................................................TCACAGCCAGCTTTGATGGGTTT................................................................. 23 2 2 1.00 2 1 0 1 0
..................................................................................................................TCACAGCCATCTTTGATGGG.................................................................... 20 1 1 1.00 1 0 1 0 0
.....................................................................TCATCAAAAAGGGCTGAGGAAAGAT............................................................................................................ 25 1 1 1.00 1 1 0 0 0
..............................................................................................................CAGATCACAGCCAGCTTTGATGGGAA.................................................................. 26 3 1 1.00 1 0 0 1 0
.....................................................................TCATCAGAAAGGGCTGAAGAAAGATA........................................................................................................... 26 1 1 1.00 1 1 0 0 0
..................................................................................................................TCACAGCCAGCTTTGATGGGG................................................................... 21 1 1 1.00 1 0 1 0 0
................................................................................................................TATCATAGCCAGCTTTGCTGGG.................................................................... 22 2 1 1.00 1 0 0 1 0

Anti-sense strand reads

GAAACTTTATTACGGGAGGACGTCGACACACACACACGCAGCTGCAATGGAGCATAGAATGAAAGTTACAGTAGTTTTTCCCGACTTCTTTCTATAAAGACGTAAACTTAGCATAGTGTCGGTCGAAACTACCCGTAACGTTACTCGTCGCTATCGTTTCACACTGGGCACTGGATACTGGGGCGACCTACGCTTACGTCTT

***************************************************..((((.((.(((((((((((((...(((((......((((((((.......)))..))))).)))))...)))))).))))))).)))))).....****************************************************** 		Read size # Mismatch Hit Count Total Norm Total M054

female body
.............................................................................................................ACCATAGTCTCGGTCCAAA.......................................................................... 19 3 13 0.15 2 2

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droSec2 scaffold_0:10704794-10704995 + dse-mir-2c Known_mirbase CTTTGAAAT--------------AAT---------------------GCCCTCCTGCAGCTGTGTG--------------------------T------------------------------------------------------------------GTGT-----GC------------------GTCGACGTTACCTCGTAT-CTTACTTTCAATGTCATCAAAAAGGGCTGAAGAAAGATATTTCTGCATTTGAATCGTATCACAGCCAGCTTTGATGGGCATTGCAATGAGCAGCGATAG------C-----AA-AGT-GTGACCCGTGAC----------------------------------------CTAT---------------------------------GAC---CC-CGC-TGGAT--GCG--------------------------AA-----------------TGCAGAA
droSim2 3r:9985322-9985546 + dsi-mir-2c Known_mirbase CTTTGAAAT--------------AAT---------------------GCCCTCCTGCAGATGTGTG--------------------------TGTGTGT--GCGAC------TTGTGATG---------------------------------G--TGTGTGT-----GC------------------GTCGACGTTACCTCGTAT-CTTACTTTCAATGTCATCAAAAAGGGCTGAAGAAAGATATTTCTGCATTTGAATCGTATCACAGCCAGCTTTGATGGGCATTGCAATGAGCAGCGATAG------C-----AA-AGT-GTGACCCGTGAC----------------------------------------CTAT---------------------------------GAC---CC-CGC-TGGAT--GCG--------------------------AA-----------------TGCAGAA
dm3 chr3R:11243411-11243632 - dme-mir-2c Known_mirbase CTTTGCAG---------------------------------------------------CTGTGTG--------------------------T-------------------GT--------------GTGTGTGTGTGCGATGTGTGTGATGG--TGTGTGT-----GC------------------GTCGACGTTACCTCGTAT-CTTACTTTCAATGTCATCAAAAAGGGCTGAAGAAAGATATTTCTGCATTTGAATCGTATCACAGCCAGCTTTGATGGGCATTGCAATGAGCAGCGATAG------C-----AA-AAT-GTGACCCGTGGC-----------------------------G---TGAC---CTAT---------------------------------GAC---CC-CGC-TCGAT--GCG--------------------------AA-----------------TGCAGAA
droEre2 scaffold_4770:10769552-10769773 - der-mir-2c Known_mirbase CTTTGAAAT--------------AAT---------------------ACCCTCCTGTGGGTGTGT------------------------------------GCGGT------GTGTGACG---------------------------------G--TGTGTGT-----GT------------------GTCGACGTTACCTCGTAT-CTTACTTTCAATGTCATCAAAAAGGGCTGAAGAAAGATATTTCTGCATTTGAATCGTATCACAGCCAGCTTTGATGGGCATTGCAATGAGCATCGATGG------C-----AA--GT-GTGACCTGTGACCT---------------------------G---TGAC---CTGG---------------------------------GAC---CC-CGC-TCGAT--GCG--------------------------AA-----------------TGTCT-A
droYak3 3R:15188313-15188519 + dya-mir-2c Known_mirbase GTGTG-------------------TT---------------------ATGT-------------------------------------------------------------GA-CGG--G------T---------------G------------TG--TGTGTGT-GCGTG------------TTCGTCGACGTTACCTCGTAT-CTTACTTTCAATGTCATCAAAAAGGGCTGAAGAAAGATATTTCTGCATTTGAATCGTATCACAGCCAGCTTTGATGGGCATTGCAATGAGCATCGATAG------T-----AA--GT-GCGACCTGTGAC----------------------------------------CTGT---------------------GAACGCTC----GAC---CC-CGC-TCGAT--GCG--------------------------AA-----------------CGTAGAA
droEug1 scf7180000409281:109279-109481 + CGGTG------------------------------------------------------------------------------------------------------------CGTAATTGTGTGTGTGTGTGTGTGTG---CGTATAA------GTGTATT----T-GT-------------------------ATTCCTCGTAT-CTTACTTTCAATGTCATCAAAAAGGGCTGAAAAAAGATATTTCTGCTTTTGATTCGTATCACAGCCAGCTTTGATGGGCATTGCAATGAGCATCGATAG------C-----ACT-GT-GTGAC-----------------------------------------------CTCT---------------------------------GAC---CT-CAC-TCGAA--GCG--------------------------AATCTAC------------ATAATAA
droBia1 scf7180000302136:835707-835912 - A-----AGT--------------AAT---------------------ACCCTCGTGTATCTGTGTG--------------------------T-------------------GCGTAATACTGTG---------------------CGT------GTG---------TGT------------------ATCCT-CCCACCTCGTAT-CTTACTTTCAATGTCATCAAAAAGGGCTGAAGAAAGATATTTCTGCATTTGAATCGTATCACAGCCAGCTTTGATGGGCATTGCAATGAGCATCGATAG------C-----ACT--T-GCGAC-----------------------------------------------CTGT---------------------------------GAC---CT-CGC-AGG----GCG--------------------------CATCTA-------------TGTACCT
droTak1 scf7180000415769:1925695-1925914 + CGTTGAGAT-AC-----------AAT---------------------ACCCTCTCGTATCTGTGTG--------------------------TGC------GCGGT------GCGTAATAGTGTGAGA-------------------------G--TGTGTGT-----GT------------------G----------CTCGTAT-CTTACTTTCAATGTCATCAAAAAGGGCTGAAGAAAGATATTTCTGCATTTGAATCGTATCACAGCCAGCTTTGATGGGCATTGCAATGAGCATCGATAG------C-----AA-ATC-GTGAC-----------------------------------------------CTGT---------------------------------GAC---CTCCTC-CCAAA--GCG--------------------------AATATAC------------CATATCA
droEle1 scf7180000491080:1007272-1007486 - CGTTGAAGT--------------AAT---------------------ACCCTCTTGTATCTGTGTG--------------------------T-------------------GT-----------------------------GT--G--------TTT---------GT------------GTGT--GACGACGTTACCTCGTAT-CTTACTTTCAATGTCATCAAAAAGGGCTGAAGAAAGATATTTCTGCATTTGAATCGTATCACAGCCAGCTTTGATGGGCATTGCAATGAGCATCGATAG------C-----ATTTTT-GTGACCGGTGAACT---------------------------G---CGAC---CTGT---------------------------------GAC---CT-CTC-TCCAT--GCC--------------------------AA--------------------ATCA
droRho1 scf7180000779250:92399-92599 + CGTTGAAAT--------------AAT---------------------ACCCTCTTATATCTGTGTG--------------------------C--------GCGGT------GCGTAAAAG-----------------------------------TGTGTG----T-GTGTG-----------------CGACGTTACCTCGTAT-CTTACTTTCAATGTCATCAAAAAGGGCTGAAAAAAGATATTTCTGCATTTGAATCGTATCACAGCCAGCTTTGATGGGCATTGCAATGAGCATCGATAG------C-----ATTTTT-GTGAC-----------------------------------------------CTCT---------------------------------GAC---CT-TTC-CCC----------------------------------------------------------A
droFic1 scf7180000452523:592428-592649 - CGGTGAAAT--------------AAT---------------------TCTCTCCTGTATCTGTGTG--------------------------TGTGC----GCGGT------GCGTAAAAG-----------------------------------TGTGTG----T-GCGTG------------T--GACGACGTTTCCTCGTAT-CTTACTTTCAATGTCATCAAAAAGGGCTGAAGAAAGATATTTCTGCATTTGAATCGTATCACAGCCAGCTTTGATGGGCATTGCAATGAGCATCGATAG------C-----ACTTT----GAC-----------------------------------------------CTGT---------------------------------GAC---CT-CTC-TCCAA--GCC----------------------ACGAAA-----------------TTTATAT
droKik1 scf7180000302639:1442964-1443166 + TGTG----------------------------------------------------TATC--------------------------------------------GC------GCTTAATAGTGTGCGTGTGT-----------GT--AT----G--TG--------T-GTGTG-----------------AGCCGTTACTTTGTAT-CTTACTTTCAATGTCATCAAAAAGGGCTGAAGAAAGATATTTCTGCATTTGAAGCGTATCACAGCCAGCTTTGATGGGCATTGCAATGAGCATCGATTA------C-----CA-ATT-GCGAC-----------------------------------------------CTG-------------------------------------------------------CAGAGCCAGCCCCTTTGCCTCACC-----------------------CACTAAA
droAna3 scaffold_13340:12827792-12827999 - dan-mir-2c Known_mirbase TATTT--------------------------------------------------------GTGTG--------------------------C--------GTA-TATATGTGTGTATAT-----------------------GT--GT----G--TG--------T-GTGTGTGCAGTTGCGTTT--AGCGACGTATCTACGAAT-CTTACTTTCAATGTCATCAAAAAGGGCTGAAG--AGATATTTCTGCATTTGAAGTGTATCACAGCCAGCTTTGATGGGCATTGCAATAAGCCTAGATTCCGATTGAAACTGATTTTT-----------------------------------------------------------------------------------------------------C-TAC----GAT---------------------------------------AAAAAATACGATA
droBip1 scf7180000396691:1710680-1710888 - ATTTG---------------------------------------------------------TGTG--------------------------TGTGT----GT-GT------GT-----------------------------GT--GT----G--TG--------T-GTGTGTGCGGTTGCGTTT---GCGACGTATCTATGAAT-CTTACTTTCAATGTCATCAAAAAGGGCTGAAG--AGATATTTCTGCATTTGAAGTGTATCACAGCCAGCTTTGATGGGCATTGCAACGAGCATAGATTCCGATTGAACTTAATTTTT------------------------------------------------------------------------------------------TAA---AA-TTC-TAAAA--GAT----------------------G---AAAGAAT------------CACCTAC
dp5 2:9824633-9824857 + dps-mir-2c Known_mirbase CGTTGGTGT--------------ATT---------------------GCGTGCGTGTGCGTGTG---------------------------------------------------TG----------------T----G---CGTGCGT------GCT---------TGC------------GT-------ATCGGCACTTGGTATCCTTACTTTCAGTGTCATCAAAAATGGCTGAAGAAAGATATATTTGCATTTGAAGCGTATCACAGCCAGCTTTGATGGGCATTGCAATGAGCATCGATTG------C-----AGTTTC-GCGTCACAAGAAAT---------------------------G-------------T---------------------ACATACTCGTATG--TACCC-CGCCT--ATGTGCA--------------------------GA-----------------CCCAGCC
droPer2 scaffold_0:10660210-10660455 - dpe-mir-2c Known_mirbase TGTTGGTGC--------------ATT---------------------GCGTCCGTGTGCGTGTG-------------------------------------------------CGT---------------------------GTGTG--------TGTGTG----C-GTGC----------------GT-ATCGGCACTTGGTATCCTTACTTTCAGTGTCATCAAAAATGGCTGAAGAAAGATATATTTGCATTTGAAGCGTATCACAGCCAGCTTTGATGGGCATTGCAATGAGCATCGATTG------C-----AGTTTC-GCGTCACAAAAAAT---------------------------G-------------T---------------------ACATACTCGTATG--TACCC-CGCCT--ATGTGCAGCCCCAGCCCCC-AGCCCCATG-----------------------TGCCCAA
droWil2 scf2_1100000004902:2143419-2143723 - dwi-mir-2c Known_mirbase ATTTGGAGTTCGTTTACCAGGATAATTTATAAGCAGTGCAGTGTATCCCCATCCTG------TGTG--------------------------T----------C-TATGTCTGTGTTCAT-----------------------GTGTG--------TG--------T-GTGT----------------G---------AATTGCGT-CTTACTTTCAATGTCATCAAAAAGGGCTGAAGAAAGATATTTTTGCATTTGAAGCGTATCACAGCCAGCTTTGATGGGCATTGCAATGAGCATCGTTTT-----GC-----ATTTTTCCCCTCATTAT----TCGCCACACACTCTGGGAGTACCAGCCAACAG---AGACAGAGAGCGAGCGACCGAGAGAGAGCG----------AA-----C-AAC-TGCAT--ACG--------------------------------CATAATG-------GATGAA
droVir3 scaffold_13047:13335357-13335567 + dvi-mir-2c Known_mirbase TAAG--AGTTC--------------------------------------------------GAGTG--------------------------CGTGCGTGCCT-GTGTGT--GTGTG----------------T----G---TGTGTGTGC--GCGTG---------TGT--------------------------GTGTACATGT-CTTACTTTCAATGTCATCAAAAAGGGCTGA-GAATGATATATCTGCAATTGAATCGTATCACAGCCAGCTTTGATGGGCATTGCAAAGGGCAACG-TAG------C-----AGAAAA-GTAACAAATAAC-----------------------------G----------CCAT---------------------------------AAA---CA-G------------G--------------------------ACTAC--------AACAAACCCAACA
droMoj3 scaffold_6540:10568035-10568251 + dmo-mir-2c Known_mirbase CGTTTACAC------------------------------------------GG--------GTGTG--------------------------C--------CA-GTGTAT--GTGTGA--------------------G---TGTGTAT------GTT---------TGT------------GTGT------A-CATGCTTG--GT-CTTACTTTCAGTGTCATCAAAAAGGGCTGA-GAATGATATTTCTGTAATTGAATTGTATCACAGCCAGCTTTGATGGGCACTGCGAAGGGCGAAG-TAA------C-----AGT---------------------------------------------AACAT---TAACAGTAAGAGAGAAAAAAAAAA----AA----------AAA---AA-CGG-AA-AC--AAA---------------------------A---------TT------TATAGGT
droGri2 scaffold_14906:4357842-4358067 - dgr-mir-2c Known_mirbase CGTTTACAT--------------CA------------------------------------GTGTGCTTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTTTTT-GT------GTGTGTGTG------------TGTGTG---TGTGTGT------GTT---------TGT------------GT--------------GTACATGT-CTTACTTTCAATGTCATCAAAAAGGGCTGA-GAATGATATATCTGCAATTGAATCGTATCACAGCCAGCTTTGATGGGCATTGCAAAGGGCAATG-TAG------C-----AA-AAA-GAG--------------------------------------------------TAT---------------------------------TAC---TT-CGC-CA-AC--AAT--------------------------AT-----------------TACAACA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSec2
CTTTGAAAT--------------AAT---------------------GCCCTCCTGCAGCTGTGTG--------------------------T------------------------------------------------------------------GTGT-----GC------------------GTCGACGTTACCTCGTAT-CTTACTTTCAATGTCATCAAAAAGGGCTGAAGAAAGATATTTCTGCATTTGAATCGTATCACAGCCAGCTTTGATGGGCATTGCAATGAGCAGCGATAG------C-----AA-AGT-GTGACCCGTGAC----------------------------------------CTAT---------------------------------GAC---CC-CGC-TGGAT--GCG--------------------------AA-----------------TGCAGAASizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCA..........................................................................................................................................................................................................2213047.00304775112471490
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATG..............................................................................................................................................................................................................204879.503518106083872288
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGG............................................................................................................................................................................................................201788.00788575118608
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGC...........................................................................................................................................................................................................211520.00520411172306
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGA...........................................................................................................................................................................................................211308.00308263297
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGAT...............................................................................................................................................................................................................194287.001148127424993
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCT..........................................................................................................................................................................................................224254.50101812306279421
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAAGAT....................................................................................................................................................................................................................................................251225.002252518137
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAG..........................................................................................................................................................................................................................................................191225.0022517861139
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGCT..........................................................................................................................................................................................................244204.758196065496198
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCAT.........................................................................................................................................................................................................231156.00156219855
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAAGA.....................................................................................................................................................................................................................................................241143.001430012122
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGT...........................................................................................................................................................................................................211129.00129012999
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATG..............................................................................................................................................................................................................184126.0050421013470
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGA................................................................................................................................................................................................................186115.33692190108565
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGG............................................................................................................................................................................................................22193.00935811618
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGT.............................................................................................................................................................................................................19490.50362700355
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGC...........................................................................................................................................................................................................23174.00743702314
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCAA.........................................................................................................................................................................................................23160.0060013524
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGA.........................................................................................................................................................................................................................................................20160.0060971826
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGT.............................................................................................................................................................................................................21453.7521517181179
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAAGATA...................................................................................................................................................................................................................................................26149.004901444
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAAG......................................................................................................................................................................................................................................................23147.004721422
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAA.......................................................................................................................................................................................................................................................22147.0047351821
...........................................................................................................................................................................................................................................................................ACAGCCAGCTTTGATGGGCA..........................................................................................................................................................................................................20146.0046003412
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGCA..........................................................................................................................................................................................................24140.004002335
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGG.............................................................................................................................................................................................................21129.002925004
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAA........................................................................................................................................................................................................................................................21125.002541614
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATT..............................................................................................................................................................................................................20419.0076195052
...........................................................................................................................................................................................................................................................................ACAGCCAGCTTTGATGGG............................................................................................................................................................................................................18118.001800513
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGAA...............................................................................................................................................................................................................19615.8395101084
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATG..............................................................................................................................................................................................................19413.5054440010
..........................................................................................................................................................................................................................................................................CACAGCCAGCTTTGATGGGCA..........................................................................................................................................................................................................21113.00134072
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGA............................................................................................................................................................................................................20113.001320011
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGG.............................................................................................................................................................................................................19111.001110001
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATT..............................................................................................................................................................................................................18410.754300043
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCAC.........................................................................................................................................................................................................23110.00101081
...........................................................................................................................................................................................................................................................................ACAGCCAGCTTTGATGGGC...........................................................................................................................................................................................................1918.0080035
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCG..........................................................................................................................................................................................................2217.0070133
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGTT..........................................................................................................................................................................................................2247.002800262
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGT................................................................................................................................................................................................................1866.333800038
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCC..........................................................................................................................................................................................................2216.0060060
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATGGG............................................................................................................................................................................................................2116.0062022
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGT...........................................................................................................................................................................................................2316.0061014
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATGGGT...........................................................................................................................................................................................................2216.0060051
..........................................................................................................................................................................................................................................................................CACAGCCAGCTTTGATGGG............................................................................................................................................................................................................1915.0053002
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAA...........................................................................................................................................................................................................................................................1815.0050050
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATA..............................................................................................................................................................................................................2044.751952111
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGAAA..............................................................................................................................................................................................................2094.564133233
..........................................................................................................................................................................................................................................................................CACAGCCAGCTTTGATGGGC...........................................................................................................................................................................................................2014.0042011
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGT............................................................................................................................................................................................................2014.0040013
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATA..............................................................................................................................................................................................................1843.751500015
...........................................................................................................................................................................................................................................................................ACAGCCAGCTTTGATGGGCT..........................................................................................................................................................................................................2043.501400104
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGA...........................................................................................................................................................................................................2313.0031011
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGCA...........................................................................................................................................................................................................2113.0030021
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAGAT.....................................................................................................................................................................................................................................................2413.0030030
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATGGGC...........................................................................................................................................................................................................2213.0030021
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGCT...........................................................................................................................................................................................................2113.0030111
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCAAA........................................................................................................................................................................................................2413.0030030
......................................................................................................................................................................................................................................................TTTCTGCATTTGAATCGTA................................................................................................................................................................................................................................1913.0030021
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAGA......................................................................................................................................................................................................................................................2312.0020020
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGTT............................................................................................................................................................................................................2042.0080008
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATGGGA...........................................................................................................................................................................................................2212.0021001
..........................................................................................................................................................................................................................................................................CACAGCCAGCTTTGATGGGCAA.........................................................................................................................................................................................................2212.0020020
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGCAA.........................................................................................................................................................................................................2512.0020011
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGTA............................................................................................................................................................................................................2042.0080017
................................................................................................................................................................................................................................CAAAAAGGGCTGAAGAAAGATA...................................................................................................................................................................................................................................................2212.0020020
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAAGATAT..................................................................................................................................................................................................................................................2712.0020020
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAAGATT...................................................................................................................................................................................................................................................2612.0020020
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAAGAA....................................................................................................................................................................................................................................................2512.0020011
.............................................................................................................................................................................................................................CATCAAAAAGGGCTGAAGAAAGAT....................................................................................................................................................................................................................................................2412.0020011
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGTT............................................................................................................................................................................................................2241.7571015
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAA..........................................................................................................................................................................................................................................................1921.5031002
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGTA............................................................................................................................................................................................................2241.5063003
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGCT............................................................................................................................................................................................................2241.2550050
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATGGGCT..........................................................................................................................................................................................................2341.2551013
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGAT..........................................................................................................................................................................................................2241.2550014
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATTT.............................................................................................................................................................................................................1961.0060006
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAAA......................................................................................................................................................................................................................................................2311.0010001
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGC............................................................................................................................................................................................................2011.0010001
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGG...........................................................................................................................................................................................................2111.0010001
droSim2
CTTTGAAAT--------------AAT---------------------GCCCTCCTGCAGATGTGTG--------------------------TGTGTGT--GCGAC------TTGTGATG---------------------------------G--TGTGTGT-----GC------------------GTCGACGTTACCTCGTAT-CTTACTTTCAATGTCATCAAAAAGGGCTGAAGAAAGATATTTCTGCATTTGAATCGTATCACAGCCAGCTTTGATGGGCATTGCAATGAGCAGCGATAG------C-----AA-AGT-GTGACCCGTGAC----------------------------------------CTAT---------------------------------GAC---CC-CGC-TGGAT--GCG--------------------------AA-----------------TGCAGAASizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGA................................................................................................................................................................................................................1855639.4028197466387345200607913359164271302000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGA.........................................................................................................................................................................................................................................................2013483.003483300069379109001560211000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATG..............................................................................................................................................................................................................2032444.677334179310550273987357658733217831177162010
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGAT...............................................................................................................................................................................................................1932171.6765157380172034410727312910173312000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCA..........................................................................................................................................................................................................2211618.00161829136230500462151101000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATG..............................................................................................................................................................................................................1831036.33310913313517112401452320018000000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAA........................................................................................................................................................................................................................................................211918.00918703231462020001950000000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAAGA.....................................................................................................................................................................................................................................................241729.00729113852800010372701500000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAA.......................................................................................................................................................................................................................................................221727.00727431162401030014200200000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGG............................................................................................................................................................................................................201482.0048239291916426001101400000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAG..........................................................................................................................................................................................................................................................191384.003843201323204009130000000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGG.............................................................................................................................................................................................................191355.0035514071142716500000100000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAAGAT....................................................................................................................................................................................................................................................251336.0033671318510000302701810000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGG.........................................................................................................................................................................................................................................................201335.0033526586200000000000000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGG.............................................................................................................................................................................................................211231.00231383375012222002101000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGC...........................................................................................................................................................................................................211191.001911030291472700031700000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGCT..........................................................................................................................................................................................................243145.6743770713002745227426000000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAAGATA...................................................................................................................................................................................................................................................261116.0011623271000003701000000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCT..........................................................................................................................................................................................................223110.67332764840021135018300000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGC...........................................................................................................................................................................................................23161.006140114210441071400000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAAG......................................................................................................................................................................................................................................................23161.006181100000121180100001
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGG............................................................................................................................................................................................................22160.00604021231452008901000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTT..................................................................................................................................................................................................................16548.802440000001100242000000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTG.................................................................................................................................................................................................................17541.402070000001301202000000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAA...........................................................................................................................................................................................................................................................18140.0040210700900120000000
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGAT...............................................................................................................................................................................................................18339.331181000338100003000000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAAGG.....................................................................................................................................................................................................................................................24134.0034303100000000000000
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATG..............................................................................................................................................................................................................19333.009916002265400001000000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAA..........................................................................................................................................................................................................................................................19131.0031291100000000000000
...........................................................................................................................................................................................................................................................................ACAGCCAGCTTTGATGGGCA..........................................................................................................................................................................................................20125.0025000000000012400000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGAT...............................................................................................................................................................................................................17323.3370000000213064000000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAAGAA....................................................................................................................................................................................................................................................25123.0023101900000210000000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGT...........................................................................................................................................................................................................21122.0022000000000002200000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTT...................................................................................................................................................................................................................15519.0095000000000095000000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCAA.........................................................................................................................................................................................................23119.0019000000000001900000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGCA..........................................................................................................................................................................................................24118.0018000000000041400000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGA................................................................................................................................................................................................................16516.8084000000102011142000000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCC..........................................................................................................................................................................................................22115.0015100200000000300000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCAT.........................................................................................................................................................................................................23115.0015000002000001300000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCTG.........................................................................................................................................................................................................23314.6744000000000004400000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCG..........................................................................................................................................................................................................22114.001430200000000900000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGA...........................................................................................................................................................................................................21113.001390010000000300000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGT.........................................................................................................................................................................................................................................................20110.001091000000000000000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGA...........................................................................................................................................................................................................2319.00900000024011100000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAT..........................................................................................................................................................................................................................................................1919.00990000000000000000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAC..........................................................................................................................................................................................................................................................1919.00990000000000000000
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATGGGC...........................................................................................................................................................................................................2218.00800510100000100000
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATGG.............................................................................................................................................................................................................2018.00841000300000000000
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATGGGT...........................................................................................................................................................................................................2217.00700000000000700000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGT.............................................................................................................................................................................................................2137.002140040010004008000
..........................................................................................................................................................................................................................................................................CACAGCCAGCTTTGATGGGCA..........................................................................................................................................................................................................2117.00700030000000400000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGAA...............................................................................................................................................................................................................1956.6033400100412453000000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAG........................................................................................................................................................................................................................................................2115.00541000000000000000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGATT..........................................................................................................................................................................................................................................................1924.50990000000000000000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGAAA..............................................................................................................................................................................................................20104.304351010051011100000000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAAGATT...................................................................................................................................................................................................................................................2614.00420100000000001000
..............................................................................................................................................................................................................................................................................GCCAGCTTTGATGGGCT..........................................................................................................................................................................................................1754.0020000000000020000000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGAC..........................................................................................................................................................................................................2214.00440000000000000000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAT........................................................................................................................................................................................................................................................2114.00431000000000000000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGTT..........................................................................................................................................................................................................2234.0012000000000001200000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGCG..........................................................................................................................................................................................................2414.00400000000000400000
.............................................................................................................................................................................................................................CATCAAAAAGGGCTGAAGA.........................................................................................................................................................................................................................................................1914.00430100000000000000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCAC.........................................................................................................................................................................................................2314.00420010000000100000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATA..............................................................................................................................................................................................................2033.671120020000221200000
..........................................................................................................................................................................................................................................................................CACAGCCAGCTTTGATGG.............................................................................................................................................................................................................1813.00300000300000000000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAAA......................................................................................................................................................................................................................................................2313.00320000000010000000
......................................................................................................................................................................................................................................................................GTATCACAGCCAGCTTTGA................................................................................................................................................................................................................1913.00300001200000000000
...........................................................................................................................................................................................................................................................................ACAGCCAGCTTTGATGGGCT..........................................................................................................................................................................................................2033.00900000000004500000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAAGC.....................................................................................................................................................................................................................................................2413.00310200000000000000
......................................................................................................................................................................................................................................................TTTCTGCATTTGAATCGTA................................................................................................................................................................................................................................1913.00300300000000000000
.............................................................................................................................................................................................................................................................................AGCCAGCTTTGATGGGCA..........................................................................................................................................................................................................1813.00300000000000300000
..............................................................................................................................................................................................................................ATCAAAAAGGGCTGAAGA.........................................................................................................................................................................................................................................................1813.00330000000000000000
..........................................................................................................................................................................................................................................................................CACAGCCAGCTTTGATGGG............................................................................................................................................................................................................1913.00300020100000000000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGA............................................................................................................................................................................................................2013.00330000000000000000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGAT..........................................................................................................................................................................................................2233.00910000000000800000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGT...........................................................................................................................................................................................................2313.00300000000000300000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAAGAC....................................................................................................................................................................................................................................................2513.00320100000000000000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGC.............................................................................................................................................................................................................2132.33710010000200300000
...........................................................................................................................................................................................................................................................................ACAGCCAGCTTTGAT...............................................................................................................................................................................................................1542.25900000000009000000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGATG.........................................................................................................................................................................................................2332.00600000000000600000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGG...........................................................................................................................................................................................................2112.00210000000100000000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGT.............................................................................................................................................................................................................1932.00620020000000002000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAAGT.....................................................................................................................................................................................................................................................2412.00200100000010000000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAT...........................................................................................................................................................................................................................................................1812.00220000000000000000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAATT.........................................................................................................................................................................................................................................................2012.00220000000000000000
..........................................................................................................................................................................................................................................................................CACAGCCAGCTTTGATGGGC...........................................................................................................................................................................................................2012.00200010100000000000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAAGATAA..................................................................................................................................................................................................................................................2712.00200100000100000000
..............................................................................................................................................................................................................................................................TTTGAATCGTATCACAGC.........................................................................................................................................................................................................................1812.00220000000000000000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGCC..........................................................................................................................................................................................................2412.00210000000000100000
......................................................................................................................................................................................................................................................TTTCTGCATTTGAATCGT.................................................................................................................................................................................................................................1812.00200000100100000000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTG.................................................................................................................................................................................................................1552.0010000000000010000000
............................................................................................................................................................................................................................................................................CAGCCAGCTTTGATGGGCA..........................................................................................................................................................................................................1912.00200000000000200000
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATGGGA...........................................................................................................................................................................................................2212.00200000000000200000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGC.........................................................................................................................................................................................................................................................2012.00220000000000000000
..........................................................................................................................................................................................................................................................................CACAGCCAGCTTTGATGGGCAT.........................................................................................................................................................................................................2212.00200000000000200000
...........................................................................................................................................................................................................................................................................ACAGCCAGCTTTGATGGGCAA.........................................................................................................................................................................................................2112.00200000000000200000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATA..............................................................................................................................................................................................................1831.67510010011010000000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCTC.........................................................................................................................................................................................................2331.67500000000000500000
...........................................................................................................................................................................................................................................................................ACAGCCAGCTTTGATG..............................................................................................................................................................................................................1631.67500000000005000000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCGA.........................................................................................................................................................................................................2331.67500000000000500000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGAC...............................................................................................................................................................................................................1951.60850000000003000000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGG................................................................................................................................................................................................................1851.40750100000001000000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGACT..........................................................................................................................................................................................................................................................1931.33440000000000000000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGTT..........................................................................................................................................................................................................2431.33400000000000400000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGC.............................................................................................................................................................................................................1931.33410000000001200000
dm3
CTTTGCAG---------------------------------------------------CTGTGTG--------------------------T-------------------GT--------------GTGTGTGTGTGCGATGTGTGTGATGG--TGTGTGT-----GC------------------GTCGACGTTACCTCGTAT-CTTACTTTCAATGTCATCAAAAAGGGCTGAAGAAAGATATTTCTGCATTTGAATCGTATCACAGCCAGCTTTGATGGGCATTGCAATGAGCAGCGATAG------C-----AA-AAT-GTGACCCGTGGC-----------------------------G---TGAC---CTAT---------------------------------GAC---CC-CGC-TCGAT--GCG--------------------------AA-----------------TGCAGAASizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATG..............................................................................................................................................................................................................20323430.00702900000106161778911626135053330056592690511541629728610391666374387436027471015185451126468584381587022161040000000000000000073370162040536684997107972971063632618339128979202396312014135173326614060862516143203633111467427538243336324661337171245802292918823425184188001013755293250215148552366353182440130650110419316344153142450698035964435737338001952695687108219656631479114481042900059156119000006210010001249413311553274953196432203103025441755891233137100002923551545591707334273306773183211395172943552512542181444031862592206247637417210241324217133612699516039255175149450621971111721381511102251722685464015342111542841322365109605558455875893811215035819573262391111623626214711251135408758702301085126869110160
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGCT..........................................................................................................................................................................................................24313328.67399860000000010000000010064600021000000001843231919225781121259301782916421801511100000000000000000024132911628028001013515117780121826601330118183014505033321122950001010110152520231314201921232227242860000011824119156395503000241202102702751924681965043711000210613000003043001000546132518319264110263125210027000013410873263650427108420335223124409522193323355611910725926262979327213188159326698977308120742715663211278264964116822252727262987110232079510472247202696141633172823447321232006375215400130869721339979881710861099916201682762334399430260211102577674823392410
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCA..........................................................................................................................................................................................................2219312.0093120000220230965911840310110000010001142101682200100010000000001000209330000000000000000051005023110882911981203179348612949433450681031365263002143451164391582521301301502843006572653000000000035819121500000000000000000000096950691111818542281680685000003951100000000000000000000001005100000000110000100012319802511951011982650553300015630001000000000015110000000007713512217317828510421000013213110111071120223000194521642117230
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCT..........................................................................................................................................................................................................2239062.00271860000300111010010040037220129000000001010101569516504772310710134743000000000000000000003010850712231830170090821324201424214823262265652171601001314530241111600000000203017172016858121081249700000139221001913939906000524705303105300315671203191684000160725000001422000000302018106469200021111233008000060466471503931817424811922915862283561222933621914049114123426040151369779243435256276806524148528571012340795951188147961241071214211333221569134302851856784707232481133141257236149296472559327572789389110837762959111934021815948460563913284190
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGAT...............................................................................................................................................................................................................1936902.002070600000000000000100033203338184502905991021052310611202312720183391461616191896000000000000000000000002262041801204824121512114814012519512201393212466193246221591473114858614413576336301571221201147010448171107645675360000914818265225333063092362322001007712642648171853130109278512510113113041535032702757206229716314761170001110272500000215006000718044331064537401167976335324113381068000025232035151285263932582081453975744467542022071154120313261501156448518848321315251471605415860205371057316666177011521242043083724135417263841476242947433272915269717150469647612930644818141874546642117985
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGG............................................................................................................................................................................................................2013916.0039160000190000213004960490000000000572351494334000000010100000000000362000000000000000000101190046001000200651041531125410241112035034331160771453973444628330000000010000000000010000000000200001151060530191177825256531047001002403000000000100000000000000002502031212051000000041506371734354145318023315200200220200200061044391011201796115710921033001200807610001130000201010419913117105249830
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGA................................................................................................................................................................................................................1853042.6015213000000000000000001200264511003562832347120106277172312310263211250259000000000000000000000003843422643242272320730113411212413014204144202204105703240050110732811546320101580209000003498544676939755730368780510202007157490622820241354034834641613111312260162310098205659174360003401273341000041860400086657968215534573522684231149655110033384361115217910165956111226040554722121297423201181145025777116204116109573382193927601574143286291641221201352281612814011121291223442472663413221811051712436021571207813516131120
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGC...........................................................................................................................................................................................................2112721.002721000020002200004720180000130000251468722000100100020000100000068500000000000000000001211211901110171123130143470364421020201621950510181649022318150002000000200212401000000000000001020054520341063987155330049700100171000000000100000001000000012310022051401110010000244309482847144369511859135146001242424000002234724051300146547263113030003017010800311353200041040212610018148215151290
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGG............................................................................................................................................................................................................2212675.002675000010000000002002000009000000000021117260147103018422301201588000000000000000002321242754230011001320014240133027413134114326071509041150500200010000601330611146324110000013211124130210096180609100530131221000000100000210000000006214215214433300160000100472481045361342639132338113644523612235121952941541121472513018773311612658111533181112254101283625516143321185583534217364601124062510382544220
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATG..............................................................................................................................................................................................................1832018.006054000000000000003500512023070000116169102340052000002301010100000582000000000000000001812138103511553143010040155195922410910142022674132330896324348575175621263018042113054132637011261510000036100225206230010015000000102212205510861098172114933364031190303124200010370000000000000501589822980000102114000035117128922426551168911212794410712101931951916131142732031341518037141139154269177313514121012636522802100010601383322721820342
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAG..........................................................................................................................................................................................................................................................1911688.001688000000000000004003200000000010000000000000000000000000000000000000000000000000007606800011060314230111461000003039000026901045401911717000000000014200000000000000000000000283903510264433219331293400000580000000000000000000000000000000000000000000000016130419000045040000017000000000000000000000000000114810611812034361660000106003613000001000000100058413710139000000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGC...........................................................................................................................................................................................................2311593.001593000000000000002011001214001000000000201110410032161221000442000000000000000000000020271210000021000110703914121214001012001401303010000150010002050111130110003301000000105115204000105020100010011120000000000000001000000113582152754528900700003315789442434108176232229423112971012616124337127142465540577461443410225231032915162303021310231052614711010751012114193413343761190
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAAGAT....................................................................................................................................................................................................................................................2511492.0014920000100432040000000000000000000000900000000000000000000000000000000000000000101123751712930004951191002231328700102000224352105023010474040430000000000247202000001000100000000000156010007609051170000001800000000000000000000000000000000100020100000000341400200001200000001900010000000000002000000000001415157394118850000009020900000000021000003651131263000010
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGT.............................................................................................................................................................................................................2131158.0034740000800000000110005000001800120000000002022003011004020000000000000000000000000563220133199193321631217212521115222539385744512143908075128118520000010512719020351901911318003200000011002200001310000000031125137380260041209180121060370171531200007070000000000000064638102523111120040100003421651136246427119153862295155011512504173188488392917315712672915100044141343110982212952408223606861135678417023400
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGA.........................................................................................................................................................................................................................................................201848.0084800001000010000100000000000002000002800000000000000000000000000000000000000000000051061410000121201192711561511000000111200113103031311321312000000000000100000000000000000000000231502000163322224217411000002200000000000000000000000000000100000000000000100870130000400100000900100000000000000010000000001918141215151210010000190111000000001000000000931502100000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAAGA.....................................................................................................................................................................................................................................................241720.007200000100120021000000000000000000000700000000000000000000000000000000000000000000014032120001052032220259280000020011850502202001404011000000000001550000000000000000000000010200104040611120000010000000000000000000000000000000000010100000011002550050000100100000150000000000000000000000000000101196135121106000000201250000001000001000261271946000000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAAGATA...................................................................................................................................................................................................................................................261714.00714000010121100000000000000000000420000000000000000000000000000000000000000000000002697714900023402500004131300001110316204010010004001000000000000017230000000000000000000000711090022040206000000200000000000000000000000000000000000010000000000215000000001000000030000000000000000100000000000553227522410000002052000000000200000101612120000000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGA...........................................................................................................................................................................................................211624.006240000000000000010020000000000000000000000000000000000000000000000000000000000000010000000001100200000010000002000000281301808173517025000000000000000000000000000000000000162406005201601501500000018000000000000000000000000100000000000000000001001101292010207921200000480000000000010000000000000000117232300300000004014000000000000000048942312000000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAA.......................................................................................................................................................................................................................................................221602.0060200001000010200000020000000000020140000000000000000000000000000000000000000000000007501330000571105713236111730030001412011050000113012234000000000000000000000000000000000000191803300151602201702910000080000000000000000000000000000000000000000000000026024000000000000050000000000000000000000000000975410161110110000405500001000000000000951621000000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAA........................................................................................................................................................................................................................................................211571.005710000300000000000011000000000100000200000000000000000000000000000000000000000000014001100001221054120112121330001101002105010200033401216100000000000001000000000000000000000002419021008221131170394000001410000000000000000000000000000000000010000000000120020000000000000100000000000000000000000000003621611101000000909500000000000000000310301100000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCAT.........................................................................................................................................................................................................231504.00504000030002200000000000000000000000000000000000000000000001412300000000000000000100061325171000004067021320440000100027505030000203061330000000000102000000000000000000000001140300111501705060000003000000001000000000000000000000000000000000003000121303160001717020000060000000000000000000000000000222911355500000101001200000000000000101310000000000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGG.............................................................................................................................................................................................................211486.0048600001000200101000000001100000000000000010011010010000000341000000000000000002202100001410011003010010140498144401000215500011100204200541000000000000000000000000000100229160180034050130170000001900010000000000000000000000042011013011200040000011023278338521411222212112192460001801126092130602030100100100000091001100010010100300000012120
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGCG..........................................................................................................................................................................................................241473.004730000000000000000000001000000000000000010001000304100000000000000000000000000000000000000001000100000000000000000000000000000000000000100000000000100000000000001001002104000200010200012000000000000100000000000000010100000000000000000000001371351101515135522153111111141104316196559952217214053198365217413271261100829201444802622330154710
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAAG......................................................................................................................................................................................................................................................231396.0039600001000040000000000000000003000008000000000000000000000000000000000000000000000071232002005806111441413360003800067400052000621002063000000000010200000000000000000000000810012102921343260000001000000000000000000000000000000010000000000000001140000000000000000000000000000000000000000000004212272543000000305400000000000000010810510000000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGT.............................................................................................................................................................................................................193379.671139000000000000000000000006000000000000000100001000000000000000000000000000000010011628200010029001104110019320301000300903600000007036002400000000000000004000000000000100890101053190603200020191010000102000000000000000001300000201132000000010043512126401646140401421106103214131010131663321410728244342001011030031320311071000112040922782586245207110
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGC.............................................................................................................................................................................................................213366.00109800000000000000000000000300100000000010010130000041201000000000000000000000003001230030000110251500100050811130100000425154166311011741055328420043010010000100010000103000000001222223016100100030300024060000000100000000010000000111010101102101000000000016514381560023991854103335041034132902812701722517000113111051532210125100400010000000000000185010
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCAA.........................................................................................................................................................................................................231358.0035800002000140000000000000000000000000000100000000000000000000000000000000000000000410201100000591518120294420000000015301010000000030310000000000101000000000000000000000005909006140130300000000320000000001000000000000000000000000000000000000036037000046150000050000000010000004004110100100913942310001000000100000300000010000110100001000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGTT............................................................................................................................................................................................................223350.6710520000000000000000000000000000000000001121000100000001100000000000000000000000000005821374203148161617861516172330291200334045555820000004800100000002001000000100001001002010021100000000000030100000000000000101000000000000000002000000200000000000000000000001000131011400100100201101100010110010103020000000001011000001000100000000000000000100000000000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGT...........................................................................................................................................................................................................211344.0034400000000100000000200001000000000000000000000000000000000000000000000000000000000100100000000002000000500000000011000010401160303100000000000000000000000000000000000089041018264305000000400000000000000000000000000000000000000000000000240215011020800700001160001000021000000104060110000126121001000002000000000000000000000004000111002000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGG.............................................................................................................................................................................................................191297.0029700000000000000300800000000001000000000000000000000000000000000000000000000000000600130010000011003101240100000100021004603001201022003200000000000000000000000000000000111001000315122170119000001100000000000000000000000000000001000000200000000210281000102701000025000000100010100020000000110030010000000000001000000000000000000000000000000
...........................................................................................................................................................................................................................................................................ACAGCCAGCTTTGATGGGCT..........................................................................................................................................................................................................203290.008700000000000000000000001000020000000000000101010204012200000000000000000000000010000000000000000000000000000000000000001000001000000000000000044101050122101000000001102202000102020200003021101000100000000010000000002010010000000000000042004733420907248133213612203211112110535681766771113701001212262013132311204302413845181922141413644118023927719100
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGCC..........................................................................................................................................................................................................241281.00281000000000000000000000000000000000000000001100020500000000000000000000000000000010000000100000000000000000020000000000000000000000000000000000000000000000000000000000010000000000000000001000000000000000000000000000000000000000000000000102012010020110320000110003002000179124029220001030101531420111110010010000212000002200100010019200
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATA..............................................................................................................................................................................................................203263.3379000009120001101000500000300000000000001110011310100100000000000000000000000001351331100621011000122001217000042123102910800322160100000000107200639600000031000002000007000000103000670200650600030002502120220000016000000050000000003101463260113004000000014601001440130130111300533225211210098130500109231310001015002100132253010001003011130010235160
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGCA..........................................................................................................................................................................................................241261.0026100000000000000000000000000000000000010000010000001000010119600000000000000000000000004000000000000000000001000000000001010002020100000000000010010000000000000000000001100000000000000001020100000000200000010000000010000000000000001000001011430122411420210201110000020013133112140110310104454100010222201000221213131012111320201220252620
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGTT..........................................................................................................................................................................................................243260.33781000000000000000000000000000000000000102020400030152011000000000000000000000000000000000000000000000000000000000000000000100010000000000000000150002401021100000000100012010000000000000000000000000000000000000000000100000000000000000000200013211450080141507135470100148711211208828106912789343436000021302022313240150000001001220100000010024800
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATT..............................................................................................................................................................................................................203255.6776700000000000000000000002100300000000000000110000002000000000000000000000000003745010000341040006110000000373030000000820100000380144120011000000001001010140000000004211575901004203060140031120183200000000000000000000000000001061211013005000000031222331329904521416022214216241103756154062120338009222120000220100201123000800013102000141000027125100
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGCAA.........................................................................................................................................................................................................251182.001820000000000000000000000000000000000010200000100001000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000051210000000010000000000000000000000000000000000001000000000000010000000010000000000000000000000000000000000000000000000000000001031721527040010000006000031446000000756000010000000002606000000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCATC........................................................................................................................................................................................................241174.00174000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011361000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCC..........................................................................................................................................................................................................221169.0016900000000000000000000000000000000000000000100000010000000000000000000000000000000001013000000000000000000000000001000061010002080340000000000000010010000000000000001004202000100000000000030000000000000000000000002000000000000000000000032004312044110002110000000000010001801403120732224120220200012210000000310000101100100200002220
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGAT..........................................................................................................................................................................................................223159.00477000000000100000000000000000000000000000000000000201000200000000000000000000000000000100000000000000004010010101000000101000000000000000000011001000000000000000000100000000030106020000101000100000000000000000000300000000000000000001001001051132132704244100100102201011324381512048310516012317011020326111117310105000000011025102001101020
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCTG.........................................................................................................................................................................................................233150.00450000000000000000000000000000000000000000020000000100000000000000000000000000000000000100000000000000000000000100000000000000000000000000000000000001000010000000000100020000000000000000000000000000000000000000000000100000000000000000001004159279199143161840425100301001101101012172339324272110111302200002803000000001010300032100100000013100
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGA............................................................................................................................................................................................................201149.00149000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000010010000002000000000000018120417360311200000000000000000000000000000000000059050021040605000000500000000000000000000000000000000000000000000000000020000318020000050000000000000000000000000000116500000000000000000000000000000001000000000000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGTT..........................................................................................................................................................................................................223148.33445000000003000000000000000000000000000000000000000200010000000000000000000000000001002040000002000001001100000100121000200101130100200000000002001100000000000000000000007305000102000100000000000000000000000000000001000000000000000000000003197152082174476000410160124121051370009161217920360460223613801002315434211000401000000000001000002200
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCG..........................................................................................................................................................................................................221145.00145000000001000000001000000000000000000000000000000000000000000000000000000000000003101800000020010000014000000000100000000000100001000000000000010001000000000000000000320100000102020000002000000000000000000000000000000000000000000000001100362034821000324100000000104010434031120440462410200200000021100000010000011000200000001000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGT...........................................................................................................................................................................................................231125.001250000000000000000000000000000000000001010001000014000100000000000000000000000000010000000100000001000000010100000000000010000000010010000000000000000000010000000000001000000000010000000000000000000000000000000000000000000000000000000000002148133300100100000100100221000213012122090000000000000000000000000000000000000000000000002010
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATG..............................................................................................................................................................................................................193125.003750000000000000000013000000000000000000000000000000000110000010000000000000000046561000000910071075700133610451631110000105110000100100000100000000000000014000010100000000151204000130180201100033011001000000200000000000000000000101000010100000000002511305702120220000102201123300001323000000320080000000001010122003101000000701700101201000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAATC......................................................................................................................................................................................................................................................231125.0012500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007649000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGATC.......................................................................................................................................................................................................................................................221120.0012000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007644000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGAA...............................................................................................................................................................................................................195119.80599000000000000000000000100001000000020000000101000003000000000000000000000000013321205011200000000000000101631300000008000010004062004500000000000100000010000000200000712001025030110700104071200000100500000000000001001171111100917600400000102263112117076003062144841120542047226126231027605621118000010130040111141001203011000403423101201438230
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGCT............................................................................................................................................................................................................223113.003390000010000000000000000011020000000001101021201200000100000000000000000000000000100212000000000001000020030100000000000000001063170000100000124040030101322000001000212201000100000000000000000000000000000000000001000000000000000000000000011284353721432222801431471050618635029012060110020700011210102301200010000101000100000000000000020
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGC.............................................................................................................................................................................................................193100.00300000000000000000000000000000000000000000000000000001000000000000000000000000000011000000010000090100011000000000000013365011211730191162600440000000000000000000000000000000012180900021000010000005000000000000000000000000000000000000003000000000000801002502000140001000000000000040000000000000400010000000000000000100000000000410000000000
...........................................................................................................................................................................................................................................................................ACAGCCAGCTTTGATGGG............................................................................................................................................................................................................18199.00990000000000000000000000000000000000000000200100021000000000000000000000000000000100000000000000000000000000000000000000000001000000000000000000000000000010000000000000001002204010000000050000000000000000000000000000010000001000000000000000520021200102200000110000111001404311032010121250000200200000000000200000000000400100000000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCTC.........................................................................................................................................................................................................23396.6729000000000000000000000000000000000000110000000000040001000000000000000000000000000000000000000000000000000000000000000210000000000000000000000000000000011100000001000001000000000000000000100000000000000000000000000000000000000000000000000033430315840130017231000000200003100223318022150130220013302106413000011000202100010101000000002620
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGGT..........................................................................................................................................................................................................22394.6728400000000000000000000000000000000000000000000001031000000000000000000000000000000100000010004000000000000000000000000200000010000000000000000000000100000000000000000021010000000101000100000000001000000000000000010000000000000000000000000011273214403013412001010021050101831164010525133010001000010011500010000000100000000000000000000100
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGTG..........................................................................................................................................................................................................24189.00890000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000010020000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000001911200204040101010000002110105241226230105300102000100000010020000000000000000000000000000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGTC..........................................................................................................................................................................................................24176.0076000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000002000000000000135211014080000000000000000010000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................ACAGCCAGCTTTGATGGGCA..........................................................................................................................................................................................................20176.00760000000001000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000001000000000000000000000000010000000000000000000000000100001203000200000040000000000000000000000000000000000000000000000031002000014010000010010000000000000301000100000211581800000000000000000000000010200200000000000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGT............................................................................................................................................................................................................20175.00750000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000300010000000000000000110000001071500000000000000000000000000000000000002000001001000100000010000000000000000000000000000000000000000000000000001011151101001003000000000000000000003000000112420000000000000000000000000000000810000000000
......................................................................................................................................................................................................................................................TTTCTGCATTTGAATCGTA................................................................................................................................................................................................................................19173.007300000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100101000000000000000002000000000000000000000000021031005104000160000000000000000000000000000000000000000000000000000011000000000000000010000000000000000000000000000112161500000000000100000000000000000100000000000
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATGGGCT..........................................................................................................................................................................................................23367.00201000000000000000000000000000000000000000000000000110000100000000000000000000000000000010000000010000001000100000000001000000100001000000000000000000000010000000010000100200100001010001002100000000000000000000000111000000000000000000002100060220021011401010200010010010571414024010112351200301302002001003184830221334013113002011540
..........................................................................................................................................................................................................................................................................CACAGCCAGCTTTGATGGGCA..........................................................................................................................................................................................................21167.00670000000100000000000000000000000000000000000000000000000000000000000000000000000000306100000000001000100000000003000000010100000000000000000000000000000000000000000002202005204010000000015000000000000000000000000000000000000000000000001200100002201000000000000000000000000000000000031010100000000000000000000000000000100000000000
droEre2
CTTTGAAAT--------------AAT---------------------ACCCTCCTGTGGGTGTGT------------------------------------GCGGT------GTGTGACG---------------------------------G--TGTGTGT-----GT------------------GTCGACGTTACCTCGTAT-CTTACTTTCAATGTCATCAAAAAGGGCTGAAGAAAGATATTTCTGCATTTGAATCGTATCACAGCCAGCTTTGATGGGCATTGCAATGAGCATCGATGG------C-----AA--GT-GTGACCTGTGACCT---------------------------G---TGAC---CTGG---------------------------------GAC---CC-CGC-TCGAT--GCG--------------------------AA-----------------TGTCT-ASizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATG..............................................................................................................................................................................................................2032654.33796332783036076155402737
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGG............................................................................................................................................................................................................2012195.00219522467124818800
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCA..........................................................................................................................................................................................................2212099.00209917424783681149000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGC...........................................................................................................................................................................................................2111496.0014961524999748250
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGAT...............................................................................................................................................................................................................193646.671940233310424515530
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGA...........................................................................................................................................................................................................211465.0046510112174340
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATG..............................................................................................................................................................................................................183389.33116867311010960
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGG............................................................................................................................................................................................................221304.003042262692590
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAG..........................................................................................................................................................................................................................................................191251.00251252150401690
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGCT..........................................................................................................................................................................................................243241.677251568430120742610
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCT..........................................................................................................................................................................................................223229.3368816177994594230
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGA................................................................................................................................................................................................................185219.80109930337610437
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGC...........................................................................................................................................................................................................231187.00187122293100230
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGT...........................................................................................................................................................................................................211127.001272581101010
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAAGA.....................................................................................................................................................................................................................................................241110.00110487411760
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAAGAT....................................................................................................................................................................................................................................................251109.001096175910620
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCAT.........................................................................................................................................................................................................23190.009021751740
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGA.........................................................................................................................................................................................................................................................20188.00881159014490
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGT.............................................................................................................................................................................................................21386.33259490214191660
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATG..............................................................................................................................................................................................................19380.672421920103460
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCAA.........................................................................................................................................................................................................23178.0078304111590
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGG.............................................................................................................................................................................................................21166.006661000050
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGT.............................................................................................................................................................................................................19460.252411308112180
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAA.......................................................................................................................................................................................................................................................22159.0059506113340
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGG.............................................................................................................................................................................................................19141.004124803060
...........................................................................................................................................................................................................................................................................ACAGCCAGCTTTGATGGG............................................................................................................................................................................................................18140.004010000390
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAAG......................................................................................................................................................................................................................................................23137.003763223210
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAA........................................................................................................................................................................................................................................................21136.003692304180
...........................................................................................................................................................................................................................................................................ACAGCCAGCTTTGATGGGCA..........................................................................................................................................................................................................20132.0032001140170
..........................................................................................................................................................................................................................................................................CACAGCCAGCTTTGATGGGCA..........................................................................................................................................................................................................21128.002813205080
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGCA..........................................................................................................................................................................................................24127.002741070150
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAAGATA...................................................................................................................................................................................................................................................26124.002407020150
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCC..........................................................................................................................................................................................................22123.002307310030
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATGGGC...........................................................................................................................................................................................................22123.002301721030
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATT..............................................................................................................................................................................................................20322.0066190520400
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGAA...............................................................................................................................................................................................................19518.4092150200750
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGA............................................................................................................................................................................................................20118.001830100140
..........................................................................................................................................................................................................................................................................CACAGCCAGCTTTGATGGGC...........................................................................................................................................................................................................20118.001811200050
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATGGGT...........................................................................................................................................................................................................22117.00170606050
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCG..........................................................................................................................................................................................................22117.00170062090
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATGGG............................................................................................................................................................................................................21116.001641000110
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGT............................................................................................................................................................................................................20116.001610200130
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATT..............................................................................................................................................................................................................18513.606800010670
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGA...........................................................................................................................................................................................................23113.00135100070
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATA..............................................................................................................................................................................................................20313.0039210201150
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCAC.........................................................................................................................................................................................................23112.001211000010
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGCC..........................................................................................................................................................................................................24112.001201001100
..........................................................................................................................................................................................................................................................................CACAGCCAGCTTTGATGGG............................................................................................................................................................................................................19111.00116000050
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCAG.........................................................................................................................................................................................................23111.001100000110
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGTT..........................................................................................................................................................................................................2239.672901258040
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATA..............................................................................................................................................................................................................1838.672600000260
...........................................................................................................................................................................................................................................................................ACAGCCAGCTTTGATGGGC...........................................................................................................................................................................................................1918.0080000080
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATGGGA...........................................................................................................................................................................................................2218.0080100070
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGAT...............................................................................................................................................................................................................1837.6723120000110
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGCG..........................................................................................................................................................................................................2417.0070005020
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGC............................................................................................................................................................................................................2017.0071100050
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGAT..........................................................................................................................................................................................................2236.001800220140
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCTG.........................................................................................................................................................................................................2336.001800016020
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAA..........................................................................................................................................................................................................................................................1915.0050100040
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGAA...........................................................................................................................................................................................................2115.0052000030
..........................................................................................................................................................................................................................................................................CACAGCCAGCTTTGATGGGCAT.........................................................................................................................................................................................................2215.0051010120
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGT............................................................................................................................................................................................................2215.0051101020
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATGGGCT..........................................................................................................................................................................................................2334.33135100070
...........................................................................................................................................................................................................................................................................ACAGCCAGCTTTGATGGGA...........................................................................................................................................................................................................1914.0040000040
.............................................................................................................................................................................................................................CATCAAAAAGGGCTGAAG..........................................................................................................................................................................................................................................................1814.0042010010
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGT...........................................................................................................................................................................................................2314.0043000010
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAA...........................................................................................................................................................................................................................................................1814.0040000040
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAAA......................................................................................................................................................................................................................................................2314.0040000130
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGT................................................................................................................................................................................................................1853.801900000190
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGAAA..............................................................................................................................................................................................................2073.712620004200
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCTC.........................................................................................................................................................................................................2333.33100013060
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGC.............................................................................................................................................................................................................2133.33102051020
......................................................................................................................................................................................................................................................................GTATCACAGCCAGCTTTGATGA.............................................................................................................................................................................................................2233.331010000000
...........................................................................................................................................................................................................................................................................ACAGCCAGCTTTGATGGGCT..........................................................................................................................................................................................................2033.33101021060
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGG...........................................................................................................................................................................................................2113.0030102000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAAGAA....................................................................................................................................................................................................................................................2513.0030000030
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCAAA........................................................................................................................................................................................................2413.0030000030
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGA............................................................................................................................................................................................................2213.0031000020
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGCA...........................................................................................................................................................................................................2122.5050100040
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATGT.............................................................................................................................................................................................................2032.3375000020
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGAT..........................................................................................................................................................................................................2432.3370000070
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAAGATAT..................................................................................................................................................................................................................................................2712.0020000020
droYak3
GTGTG-------------------TT---------------------ATGT-------------------------------------------------------------GA-CGG--G------T---------------G------------TG--TGTGTGT-GCGTG------------TTCGTCGACGTTACCTCGTAT-CTTACTTTCAATGTCATCAAAAAGGGCTGAAGAAAGATATTTCTGCATTTGAATCGTATCACAGCCAGCTTTGATGGGCATTGCAATGAGCATCGATAG------T-----AA--GT-GCGACCTGTGAC----------------------------------------CTGT---------------------GAACGCTC----GAC---CC-CGC-TCGAT--GCG--------------------------AA-----------------CGTAGAASizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCA..........................................................................................................................................................................................................2213507.0035076117113720296914270000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGA.........................................................................................................................................................................................................................................................2013074.00307429428600114570010
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGC...........................................................................................................................................................................................................2112526.0025265014422409384230000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATG..............................................................................................................................................................................................................2031016.333049256204689652023097100110
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAA........................................................................................................................................................................................................................................................211850.00850801713062030000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAA.......................................................................................................................................................................................................................................................221798.00798727229223150000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGG............................................................................................................................................................................................................201583.005831231731441459070000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAAGA.....................................................................................................................................................................................................................................................241412.004122162158811890000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAG..........................................................................................................................................................................................................................................................191368.003681531217021145200000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAAGAT....................................................................................................................................................................................................................................................251293.0029348220011216140000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGG.........................................................................................................................................................................................................................................................201289.002892890000000000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCT..........................................................................................................................................................................................................223269.33808131421014988283510000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGAT...............................................................................................................................................................................................................193216.6765091792415929070000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGCT..........................................................................................................................................................................................................243160.004803201391943075190000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATG..............................................................................................................................................................................................................183145.3343632816102285200000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGG.............................................................................................................................................................................................................191109.0010945501200200000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCAT.........................................................................................................................................................................................................231106.00106022813224100000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCC..........................................................................................................................................................................................................22195.0095307590800000
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATGGGC...........................................................................................................................................................................................................22194.0094029110000000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGC...........................................................................................................................................................................................................23189.008911655143000000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAAGATA...................................................................................................................................................................................................................................................26189.0089807270200000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGT...........................................................................................................................................................................................................21183.008304273531400000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAAG......................................................................................................................................................................................................................................................23176.007613444101040000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGTT..........................................................................................................................................................................................................22371.67215031403073500000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGA...........................................................................................................................................................................................................21159.00596840152420000
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATG..............................................................................................................................................................................................................19358.331752169101200000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCAA.........................................................................................................................................................................................................23144.00440101582000000
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATGGGT...........................................................................................................................................................................................................22144.00441025171000000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAA..........................................................................................................................................................................................................................................................19142.0042340001610000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGCA..........................................................................................................................................................................................................24139.0039007300200000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGCC..........................................................................................................................................................................................................24138.0038003610100000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCAC.........................................................................................................................................................................................................23136.0036032651100000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGG............................................................................................................................................................................................................22134.0034171114910000
...........................................................................................................................................................................................................................................................................ACAGCCAGCTTTGATGGGCA..........................................................................................................................................................................................................20132.0032001280300000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGTC..........................................................................................................................................................................................................22131.0031002801200000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGT.............................................................................................................................................................................................................21324.677401900163090000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGA................................................................................................................................................................................................................18522.40112720187213711000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCG..........................................................................................................................................................................................................22122.0022102110800000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGT.............................................................................................................................................................................................................19321.006301100173410000
..........................................................................................................................................................................................................................................................................CACAGCCAGCTTTGATGGGCA..........................................................................................................................................................................................................21120.002009560000000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGG.............................................................................................................................................................................................................21117.001783211200000
..........................................................................................................................................................................................................................................................................CACAGCCAGCTTTGATGGGC...........................................................................................................................................................................................................20116.001608800000000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGC.........................................................................................................................................................................................................................................................20113.0013120000100000
..........................................................................................................................................................................................................................................................................CACAGCCAGCTTTGATGGG............................................................................................................................................................................................................19110.001019000000000
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATGGG............................................................................................................................................................................................................2118.00804300010000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAAGAA....................................................................................................................................................................................................................................................2518.00850200010000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAA...........................................................................................................................................................................................................................................................1818.00850111000000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAAGG.....................................................................................................................................................................................................................................................2417.00770000000000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGTG..........................................................................................................................................................................................................2217.00700010600000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAAGAC....................................................................................................................................................................................................................................................2517.00710600000000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATT..............................................................................................................................................................................................................2036.331904107700000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATA..............................................................................................................................................................................................................2036.0018110204100000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCTG.........................................................................................................................................................................................................2336.0018100130400000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGCG..........................................................................................................................................................................................................2415.00500130100000
.............................................................................................................................................................................................................................CATCAAAAAGGGCTGAAG..........................................................................................................................................................................................................................................................1815.00504100000000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGAA...............................................................................................................................................................................................................1954.4022113004400000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCAAA........................................................................................................................................................................................................2414.00400000400000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAAGATT...................................................................................................................................................................................................................................................2614.00420200000000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCATT........................................................................................................................................................................................................2414.00400400000000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGA............................................................................................................................................................................................................2014.00400001300000
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATGGGCA..........................................................................................................................................................................................................2314.00400130000000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAT.......................................................................................................................................................................................................................................................2214.00430000100000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAAA......................................................................................................................................................................................................................................................2314.00401200010000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATT..............................................................................................................................................................................................................1833.331000003700000
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGAT...............................................................................................................................................................................................................1833.331008001100000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGG...........................................................................................................................................................................................................2113.00300200100000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAC..........................................................................................................................................................................................................................................................1913.00330000000000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAAGC.....................................................................................................................................................................................................................................................2413.00320100000000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGT.........................................................................................................................................................................................................................................................2013.00320000100000
..........................................................................................................................................................................................................................................................................CACAGCCAGCTTTGATGGGCAA.........................................................................................................................................................................................................2213.00300010110000
.............................................................................................................................................................................................................................CATCAAAAAGGGCTGAAGAA........................................................................................................................................................................................................................................................2013.00311000100000
..........................................................................................................................................................................................................................................................................CACAGCCAGCTTTGATGGGCAT.........................................................................................................................................................................................................2213.00300003000000
..........................................................................................................................................................................................................................................................................CACAGCCAGCTTTGATGG.............................................................................................................................................................................................................1813.00303000000000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAAGATAT..................................................................................................................................................................................................................................................2713.00300200100000
............................................................................................................................................................................................................................................................................CAGCCAGCTTTGATGGGCA..........................................................................................................................................................................................................1913.00300210000000
......................................................................................................................................................................................................................................................TTTCTGCATTTGAATCGTA................................................................................................................................................................................................................................1913.00300200100000
............................................................................................................................................................................................................................................................................CAGCCAGCTTTGATGGGC...........................................................................................................................................................................................................1813.00300300000000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGT...........................................................................................................................................................................................................2313.00300210000000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGC.............................................................................................................................................................................................................2132.33700000700000
droEug1
CGGTG------------------------------------------------------------------------------------------------------------CGTAATTGTGTGTGTGTGTGTGTGTG---CGTATAA------GTGTATT----T-GT-------------------------ATTCCTCGTAT-CTTACTTTCAATGTCATCAAAAAGGGCTGAAAAAAGATATTTCTGCTTTTGATTCGTATCACAGCCAGCTTTGATGGGCATTGCAATGAGCATCGATAG------C-----ACT-GT-GTGAC-----------------------------------------------CTCT---------------------------------GAC---CT-CAC-TCGAA--GCG--------------------------AATCTAC------------ATAATAASizeHit CountTotal NormTotal
No Reads
droBia1
A-----AGT--------------AAT---------------------ACCCTCGTGTATCTGTGTG--------------------------T-------------------GCGTAATACTGTG---------------------CGT------GTG---------TGT------------------ATCCT-CCCACCTCGTAT-CTTACTTTCAATGTCATCAAAAAGGGCTGAAGAAAGATATTTCTGCATTTGAATCGTATCACAGCCAGCTTTGATGGGCATTGCAATGAGCATCGATAG------C-----ACT--T-GCGAC-----------------------------------------------CTGT---------------------------------GAC---CT-CGC-AGG----GCG--------------------------CATCTA-------------TGTACCTSizeHit CountTotal NormTotal
No Reads
droTak1
CGTTGAGAT-AC-----------AAT---------------------ACCCTCTCGTATCTGTGTG--------------------------TGC------GCGGT------GCGTAATAGTGTGAGA-------------------------G--TGTGTGT-----GT------------------G----------CTCGTAT-CTTACTTTCAATGTCATCAAAAAGGGCTGAAGAAAGATATTTCTGCATTTGAATCGTATCACAGCCAGCTTTGATGGGCATTGCAATGAGCATCGATAG------C-----AA-ATC-GTGAC-----------------------------------------------CTGT---------------------------------GAC---CTCCTC-CCAAA--GCG--------------------------AATATAC------------CATATCASizeHit CountTotal NormTotal
No Reads
droEle1
CGTTGAAGT--------------AAT---------------------ACCCTCTTGTATCTGTGTG--------------------------T-------------------GT-----------------------------GT--G--------TTT---------GT------------GTGT--GACGACGTTACCTCGTAT-CTTACTTTCAATGTCATCAAAAAGGGCTGAAGAAAGATATTTCTGCATTTGAATCGTATCACAGCCAGCTTTGATGGGCATTGCAATGAGCATCGATAG------C-----ATTTTT-GTGACCGGTGAACT---------------------------G---CGAC---CTGT---------------------------------GAC---CT-CTC-TCCAT--GCC--------------------------AA--------------------ATCASizeHit CountTotal NormTotal
No Reads
droRho1
CGTTGAAAT--------------AAT---------------------ACCCTCTTATATCTGTGTG--------------------------C--------GCGGT------GCGTAAAAG-----------------------------------TGTGTG----T-GTGTG-----------------CGACGTTACCTCGTAT-CTTACTTTCAATGTCATCAAAAAGGGCTGAAAAAAGATATTTCTGCATTTGAATCGTATCACAGCCAGCTTTGATGGGCATTGCAATGAGCATCGATAG------C-----ATTTTT-GTGAC-----------------------------------------------CTCT---------------------------------GAC---CT-TTC-CCC----------------------------------------------------------ASizeHit CountTotal NormTotal
No Reads
droFic1
CGGTGAAAT--------------AAT---------------------TCTCTCCTGTATCTGTGTG--------------------------TGTGC----GCGGT------GCGTAAAAG-----------------------------------TGTGTG----T-GCGTG------------T--GACGACGTTTCCTCGTAT-CTTACTTTCAATGTCATCAAAAAGGGCTGAAGAAAGATATTTCTGCATTTGAATCGTATCACAGCCAGCTTTGATGGGCATTGCAATGAGCATCGATAG------C-----ACTTT----GAC-----------------------------------------------CTGT---------------------------------GAC---CT-CTC-TCCAA--GCC----------------------ACGAAA-----------------TTTATATSizeHit CountTotal NormTotal
No Reads
droKik1
TGTG----------------------------------------------------TATC--------------------------------------------GC------GCTTAATAGTGTGCGTGTGT-----------GT--AT----G--TG--------T-GTGTG-----------------AGCCGTTACTTTGTAT-CTTACTTTCAATGTCATCAAAAAGGGCTGAAGAAAGATATTTCTGCATTTGAAGCGTATCACAGCCAGCTTTGATGGGCATTGCAATGAGCATCGATTA------C-----CA-ATT-GCGAC-----------------------------------------------CTG-------------------------------------------------------CAGAGCCAGCCCCTTTGCCTCACC-----------------------CACTAAASizeHit CountTotal NormTotal
No Reads
droAna3
TATTT--------------------------------------------------------GTGTG--------------------------C--------GTA-TATATGTGTGTATAT-----------------------GT--GT----G--TG--------T-GTGTGTGCAGTTGCGTTT--AGCGACGTATCTACGAAT-CTTACTTTCAATGTCATCAAAAAGGGCTGAAG--AGATATTTCTGCATTTGAAGTGTATCACAGCCAGCTTTGATGGGCATTGCAATAAGCCTAGATTCCGATTGAAACTGATTTTT-----------------------------------------------------------------------------------------------------C-TAC----GAT---------------------------------------AAAAAATACGATASizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGG............................................................................................................................................................................................................2013634.00363426871333213238
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATG..............................................................................................................................................................................................................2032452.00735628583711554671223383
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCA..........................................................................................................................................................................................................2212060.00206015511386170391497
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGC...........................................................................................................................................................................................................2111452.0014521114464377847
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGA...........................................................................................................................................................................................................211755.007551831205708
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGAT...............................................................................................................................................................................................................193606.331819347141745421966
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGT...........................................................................................................................................................................................................211493.0049310142241442
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGT.............................................................................................................................................................................................................193315.009451000567872
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGC...........................................................................................................................................................................................................231307.00307142261741036
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCT..........................................................................................................................................................................................................223305.009158638312971561
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGCT..........................................................................................................................................................................................................243243.677318793882180344
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGA................................................................................................................................................................................................................184160.75643587813742418
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATG..............................................................................................................................................................................................................183154.3346342112422364
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGT.............................................................................................................................................................................................................213129.3338842237324244
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGG............................................................................................................................................................................................................221118.001187122718351
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAG--AGAT....................................................................................................................................................................................................................................................231116.001166241261148
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAG--AGA.....................................................................................................................................................................................................................................................221116.0011611160241154
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAG--AGATA...................................................................................................................................................................................................................................................241112.0011226213782
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCAT.........................................................................................................................................................................................................23198.009830014081
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAG--........................................................................................................................................................................................................................................................19196.0096740241447
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAG--AG......................................................................................................................................................................................................................................................21179.0079122014249
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATG..............................................................................................................................................................................................................19370.67212186304019
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGG.............................................................................................................................................................................................................19164.006444901010
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATT..............................................................................................................................................................................................................20354.00162511036965
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGT............................................................................................................................................................................................................20154.00544014045
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCAA.........................................................................................................................................................................................................23146.00461016236
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATGGGC...........................................................................................................................................................................................................22141.00413331004
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGCC..........................................................................................................................................................................................................24134.00340310111
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGG.............................................................................................................................................................................................................21131.00318151016
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGA............................................................................................................................................................................................................20131.00315001025
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGTT..........................................................................................................................................................................................................22330.0090531321030
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATGGG............................................................................................................................................................................................................21125.00253700114
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATGGGT...........................................................................................................................................................................................................22125.00251601017
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAG--A.......................................................................................................................................................................................................................................................20124.0024460824
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCC..........................................................................................................................................................................................................22122.00220200002
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGAA...............................................................................................................................................................................................................19420.2581190113147
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAG--AGATAT..................................................................................................................................................................................................................................................25120.00200000119
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATA..............................................................................................................................................................................................................20318.6756131313026
..........................................................................................................................................................................................................................................................................CACAGCCAGCTTTGATGGGCA..........................................................................................................................................................................................................21118.00181100106
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGCA..........................................................................................................................................................................................................24117.0017014048
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATT..............................................................................................................................................................................................................18311.333400017017
..........................................................................................................................................................................................................................................................................CACAGCCAGCTTTGATGGG............................................................................................................................................................................................................19111.00111000001
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGA...........................................................................................................................................................................................................23111.0011051104
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGAAA..............................................................................................................................................................................................................20610.50636629337
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGC.............................................................................................................................................................................................................21310.00303246312
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGT...........................................................................................................................................................................................................2319.009110106
...........................................................................................................................................................................................................................................................................ACAGCCAGCTTTGATGGGCA..........................................................................................................................................................................................................2019.009001503
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGAT...............................................................................................................................................................................................................1838.67262500010
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGAT..........................................................................................................................................................................................................2238.33250023119
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGAA...........................................................................................................................................................................................................2118.008000206
..........................................................................................................................................................................................................................................................................CACAGCCAGCTTTGATGGGC...........................................................................................................................................................................................................2018.008410003
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGCT............................................................................................................................................................................................................2237.0021007806
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGCG..........................................................................................................................................................................................................2417.007012013
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCAC.........................................................................................................................................................................................................2317.007210103
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGTT...........................................................................................................................................................................................................2117.007000205
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCAG.........................................................................................................................................................................................................2317.007000007
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGTT............................................................................................................................................................................................................2036.33190012214
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGT................................................................................................................................................................................................................1846.00240009015
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATGGGA...........................................................................................................................................................................................................2216.006000006
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATTT.............................................................................................................................................................................................................1985.75462007037
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCG..........................................................................................................................................................................................................2215.005000104
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGCAA.........................................................................................................................................................................................................2515.005023000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGC............................................................................................................................................................................................................2015.005030002
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGTC..........................................................................................................................................................................................................2215.005030200
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGTA...........................................................................................................................................................................................................2115.005000104
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGG...........................................................................................................................................................................................................2115.005000203
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCTG.........................................................................................................................................................................................................2334.67140012200
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAG--AGATAA..................................................................................................................................................................................................................................................2514.004000004
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGTG..........................................................................................................................................................................................................2214.004001300
...........................................................................................................................................................................................................................................................................ACAGCCAGCTTTGATGGGC...........................................................................................................................................................................................................1914.004020002
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGAC...............................................................................................................................................................................................................1944.0016090502
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGCT...........................................................................................................................................................................................................2114.004000103
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGTT..........................................................................................................................................................................................................2433.3310003601
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGTA............................................................................................................................................................................................................2043.00121001010
droBip1
ATTTG---------------------------------------------------------TGTG--------------------------TGTGT----GT-GT------GT-----------------------------GT--GT----G--TG--------T-GTGTGTGCGGTTGCGTTT---GCGACGTATCTATGAAT-CTTACTTTCAATGTCATCAAAAAGGGCTGAAG--AGATATTTCTGCATTTGAAGTGTATCACAGCCAGCTTTGATGGGCATTGCAACGAGCATAGATTCCGATTGAACTTAATTTTT------------------------------------------------------------------------------------------TAA---AA-TTC-TAAAA--GAT----------------------G---AAAGAAT------------CACCTACSizeHit CountTotal NormTotal
No Reads
dp5
CGTTGGTGT--------------ATT---------------------GCGTGCGTGTGCGTGTG---------------------------------------------------TG----------------T----G---CGTGCGT------GCT---------TGC------------GT-------ATCGGCACTTGGTATCCTTACTTTCAGTGTCATCAAAAATGGCTGAAGAAAGATATATTTGCATTTGAAGCGTATCACAGCCAGCTTTGATGGGCATTGCAATGAGCATCGATTG------C-----AGTTTC-GCGTCACAAGAAAT---------------------------G-------------T---------------------ACATACTCGTATG--TACCC-CGCCT--ATGTGCA--------------------------GA-----------------CCCAGCCSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATG..............................................................................................................................................................................................................2032977.3389321167221189382297429914536
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGC...........................................................................................................................................................................................................2111761.001761024450097228122003
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCA..........................................................................................................................................................................................................2211756.00175602003129210351066005
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGG............................................................................................................................................................................................................2011051.00105114736247516106008
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGAT...............................................................................................................................................................................................................193246.007380471026112185043
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGC...........................................................................................................................................................................................................231224.0022403589603361000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGCT..........................................................................................................................................................................................................243215.33646028175193374740000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGG.............................................................................................................................................................................................................191191.00191097880310002
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATG..............................................................................................................................................................................................................193143.334300412013140000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCT..........................................................................................................................................................................................................223121.6736502521242036824000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGT.............................................................................................................................................................................................................213121.33364020404768026010
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGG............................................................................................................................................................................................................22180.00800243334142000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATG..............................................................................................................................................................................................................18372.3321718061141130011
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATGGGC...........................................................................................................................................................................................................22170.0070073029220000
............................................................................................................................................................................................................................TCATCAAAAATGGCTGAAGAAAGATA...................................................................................................................................................................................................................................................26169.0069011803000047
............................................................................................................................................................................................................................TCATCAAAAATGGCTGAAGAAAGA.....................................................................................................................................................................................................................................................24169.0069093823000017
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGT...........................................................................................................................................................................................................21162.00620171256121000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGT.............................................................................................................................................................................................................19361.331840540472765000
............................................................................................................................................................................................................................TCATCAAAAATGGCTGAAGAAAGAT....................................................................................................................................................................................................................................................25160.0060062942010018
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGA...........................................................................................................................................................................................................21159.00590191222141000
............................................................................................................................................................................................................................TCATCAAAAATGGCTGAAGA.........................................................................................................................................................................................................................................................20154.0054021516030009
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGCC..........................................................................................................................................................................................................24153.005300448100000
............................................................................................................................................................................................................................TCATCAAAAATGGCTGAAG..........................................................................................................................................................................................................................................................19151.005104014050001
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATT..............................................................................................................................................................................................................20336.331090840101111020
............................................................................................................................................................................................................................TCATCAAAAATGGCTGAAGAAA.......................................................................................................................................................................................................................................................22132.003201158020006
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGA................................................................................................................................................................................................................18531.40157053193923160250
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCC..........................................................................................................................................................................................................22131.0031001091200000
..........................................................................................................................................................................................................................................................................CACAGCCAGCTTTGATGGG............................................................................................................................................................................................................19129.002902801000000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGG.............................................................................................................................................................................................................21129.002901349300000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGCA..........................................................................................................................................................................................................24125.002502101840000
..........................................................................................................................................................................................................................................................................CACAGCCAGCTTTGATGGGC...........................................................................................................................................................................................................20123.002301418000000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCAA.........................................................................................................................................................................................................23120.00200211880000
............................................................................................................................................................................................................................TCATCAAAAATGGCTGAAGAA........................................................................................................................................................................................................................................................21119.00190927010000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGA............................................................................................................................................................................................................20119.001905011030000
...........................................................................................................................................................................................................................................................................ACAGCCAGCTTTGATGGGCA..........................................................................................................................................................................................................20118.001802001510000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCAC.........................................................................................................................................................................................................23118.001800106200000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCAT.........................................................................................................................................................................................................23117.00170331630001
..........................................................................................................................................................................................................................................................................CACAGCCAGCTTTGATGGGCA..........................................................................................................................................................................................................21117.001701102300001
............................................................................................................................................................................................................................TCATCAAAAATGGCTGAAGAAAG......................................................................................................................................................................................................................................................23116.00160321030007
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATA..............................................................................................................................................................................................................20315.674704123010000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGA...........................................................................................................................................................................................................23115.001501020210000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCTG.........................................................................................................................................................................................................23315.004500004500000
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATGGG............................................................................................................................................................................................................21112.00120416010000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGC.............................................................................................................................................................................................................21312.003606219180000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGC............................................................................................................................................................................................................20110.00100019000000
......................................................................................................................................................................................................................................................................GTATCACAGCCAGCTTTGATG..............................................................................................................................................................................................................21110.001001000000000
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGAT...............................................................................................................................................................................................................1838.002402400000000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGT............................................................................................................................................................................................................2018.0080202040000
..........................................................................................................................................................................................................................................................................CACAGCCAGCTTTGATGG.............................................................................................................................................................................................................1818.0080800000000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGAA...............................................................................................................................................................................................................1956.803402310270010
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGTT............................................................................................................................................................................................................2036.33190806140000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGC.............................................................................................................................................................................................................1936.33190158050000
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATGG.............................................................................................................................................................................................................2016.0060402000000
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATGGGT...........................................................................................................................................................................................................2215.0050011300000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGCG..........................................................................................................................................................................................................2415.0050101210000
.............................................................................................................................................................................................................................CATCAAAAATGGCTGAAGA.........................................................................................................................................................................................................................................................1915.0050500000000
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATGT.............................................................................................................................................................................................................2035.001501500000000
...........................................................................................................................................................................................................................................................................ACAGCCAGCTTTGATGGG............................................................................................................................................................................................................1815.0050202100000
............................................................................................................................................................................................................................................................................CAGCCAGCTTTGATGGGC...........................................................................................................................................................................................................1814.0040202000000
............................................................................................................................................................................................................................TCATCAAAAATGGCTGAAGAAAGAC....................................................................................................................................................................................................................................................2514.0040040000000
......................................................................................................................................................................................................................................................................GTATCACAGCCAGCTTTGATGA.............................................................................................................................................................................................................2234.001201200000000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGTT..........................................................................................................................................................................................................2233.67110212150000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGATG.........................................................................................................................................................................................................2333.331000001000000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGAAA..............................................................................................................................................................................................................2063.171901401121000
...........................................................................................................................................................................................................................................................................ACAGCCAGCTTTGATGGGC...........................................................................................................................................................................................................1913.0030002100000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGT...........................................................................................................................................................................................................2313.0030100200000
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATGGGCA..........................................................................................................................................................................................................2313.0030001200000
............................................................................................................................................................................................................................TCATCAAAAATGGCTGAAGAAAGATT...................................................................................................................................................................................................................................................2613.0030020000001
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGTT............................................................................................................................................................................................................2233.0090600300000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGG...........................................................................................................................................................................................................2113.0030001200000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGTA...........................................................................................................................................................................................................2113.0030201000000
..........................................................................................................................................................................................................................................................................CACAGCCAGCTTTGATGGGCAT.........................................................................................................................................................................................................2213.0030100200000
............................................................................................................................................................................................................................TCATCAAAAATGGCTGAAGAAAGATAA..................................................................................................................................................................................................................................................2713.0030010000002
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCG..........................................................................................................................................................................................................2213.0030000120000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGAC...............................................................................................................................................................................................................1952.60130067000000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGCT............................................................................................................................................................................................................2232.3370000511000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATC..............................................................................................................................................................................................................2032.3370312010000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGAT..........................................................................................................................................................................................................2232.3370000700000
.............................................................................................................................................................................................................................CATCAAAAATGGCTGAAGAAAGAT....................................................................................................................................................................................................................................................2412.0020100000001
droPer2
TGTTGGTGC--------------ATT---------------------GCGTCCGTGTGCGTGTG-------------------------------------------------CGT---------------------------GTGTG--------TGTGTG----C-GTGC----------------GT-ATCGGCACTTGGTATCCTTACTTTCAGTGTCATCAAAAATGGCTGAAGAAAGATATATTTGCATTTGAAGCGTATCACAGCCAGCTTTGATGGGCATTGCAATGAGCATCGATTG------C-----AGTTTC-GCGTCACAAAAAAT---------------------------G-------------T---------------------ACATACTCGTATG--TACCC-CGCCT--ATGTGCAGCCCCAGCCCCC-AGCCCCATG-----------------------TGCCCAASizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATG..............................................................................................................................................................................................................203871.3326142613017959458331
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCA..........................................................................................................................................................................................................221482.004825381811291227
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGAT...............................................................................................................................................................................................................193227.67683310681803860
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGG............................................................................................................................................................................................................201180.0018047648817
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCT..........................................................................................................................................................................................................223100.0030001374219723
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGC...........................................................................................................................................................................................................21197.0097636910351
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGCT..........................................................................................................................................................................................................24363.3319008422610410
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGA...........................................................................................................................................................................................................21154.005401117314
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGT.............................................................................................................................................................................................................21350.00150037140675
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATG..............................................................................................................................................................................................................18343.671311225017770
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGT.............................................................................................................................................................................................................19343.00129081367311
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGT...........................................................................................................................................................................................................21134.003404011190
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATG..............................................................................................................................................................................................................19331.33940851350
............................................................................................................................................................................................................................TCATCAAAAATGGCTGAAGA.........................................................................................................................................................................................................................................................20131.00311404220
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGG............................................................................................................................................................................................................22131.00311510870
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGC...........................................................................................................................................................................................................23129.00290715250
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCAT.........................................................................................................................................................................................................23127.00270008181
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGA................................................................................................................................................................................................................18525.201266171316740
............................................................................................................................................................................................................................TCATCAAAAATGGCTGAAG..........................................................................................................................................................................................................................................................19125.00250605140
............................................................................................................................................................................................................................TCATCAAAAATGGCTGAAGAAAGAT....................................................................................................................................................................................................................................................25123.0023910184
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGG.............................................................................................................................................................................................................19116.00161121110
............................................................................................................................................................................................................................TCATCAAAAATGGCTGAAGAAAGA.....................................................................................................................................................................................................................................................24113.0013520033
............................................................................................................................................................................................................................TCATCAAAAATGGCTGAAGAAA.......................................................................................................................................................................................................................................................22111.0011011540
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGTT..........................................................................................................................................................................................................2239.67290010280
...........................................................................................................................................................................................................................................................................ACAGCCAGCTTTGATGGGCA..........................................................................................................................................................................................................2019.009001350
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATT..............................................................................................................................................................................................................1848.753501011230
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGT............................................................................................................................................................................................................2018.008010241
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATGGGC...........................................................................................................................................................................................................2218.008040400
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGG.............................................................................................................................................................................................................2117.007240100
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGCA..........................................................................................................................................................................................................2417.007002320
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCG..........................................................................................................................................................................................................2217.007100060
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATT..............................................................................................................................................................................................................2037.00210406110
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCAA.........................................................................................................................................................................................................2316.006000510
............................................................................................................................................................................................................................TCATCAAAAATGGCTGAAGAA........................................................................................................................................................................................................................................................2116.006020130
............................................................................................................................................................................................................................TCATCAAAAATGGCTGAAGAAAGATA...................................................................................................................................................................................................................................................2615.005000122
......................................................................................................................................................................................................................................................TATTTGCATTTGAAGCGTA................................................................................................................................................................................................................................1915.005000050
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGA............................................................................................................................................................................................................2015.005000230
......................................................................................................................................................................................................................................................................GTATCACAGCCAGCTTTGATG..............................................................................................................................................................................................................2114.004040000
..........................................................................................................................................................................................................................................................................CACAGCCAGCTTTGATGGG............................................................................................................................................................................................................1914.004040000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATA..............................................................................................................................................................................................................2043.7515061170
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGAA...............................................................................................................................................................................................................1953.6018050391
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGC.............................................................................................................................................................................................................2133.3310000640
...........................................................................................................................................................................................................................................................................ACAGCCAGCTTTGATGGGC...........................................................................................................................................................................................................1913.003000120
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCC..........................................................................................................................................................................................................2213.003002100
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGTT...........................................................................................................................................................................................................2113.003000210
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATGGGT...........................................................................................................................................................................................................2213.003011010
............................................................................................................................................................................................................................TCATCAAAAATGGCTGAAGAAAG......................................................................................................................................................................................................................................................2313.003000120
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGTT............................................................................................................................................................................................................2232.678030230
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGT................................................................................................................................................................................................................1852.40120001110
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGAT...............................................................................................................................................................................................................1832.337060010
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCTG.........................................................................................................................................................................................................2332.337005020
..........................................................................................................................................................................................................................................................................CACAGCCAGCTTTGATGGGCA..........................................................................................................................................................................................................2112.002010100
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGCG..........................................................................................................................................................................................................2412.002002000
............................................................................................................................................................................................................................TCATCAAAAATGGCTGAAGAAAGATAT..................................................................................................................................................................................................................................................2712.002000020
......................................................................................................................................................................................................................................................................GTATCACAGCCAGCTTTGATGA.............................................................................................................................................................................................................2232.006060000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGC.............................................................................................................................................................................................................1932.006000150
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGAT..........................................................................................................................................................................................................2232.006002220
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCAC.........................................................................................................................................................................................................2312.002002000
..........................................................................................................................................................................................................................................................................CACAGCCAGCTTTGATGGGC...........................................................................................................................................................................................................2012.002020000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGTG..........................................................................................................................................................................................................2212.002000020
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGTA............................................................................................................................................................................................................2031.675000212
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGCT............................................................................................................................................................................................................2231.675000140
droWil2
ATTTGGAGTTCGTTTACCAGGATAATTTATAAGCAGTGCAGTGTATCCCCATCCTG------TGTG--------------------------T----------C-TATGTCTGTGTTCAT-----------------------GTGTG--------TG--------T-GTGT----------------G---------AATTGCGT-CTTACTTTCAATGTCATCAAAAAGGGCTGAAGAAAGATATTTTTGCATTTGAAGCGTATCACAGCCAGCTTTGATGGGCATTGCAATGAGCATCGTTTT-----GC-----ATTTTTCCCCTCATTAT----TCGCCACACACTCTGGGAGTACCAGCCAACAG---AGACAGAGAGCGAGCGACCGAGAGAGAGCG----------AA-----C-AAC-TGCAT--ACG--------------------------------CATAATG-------GATGAASizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGA.........................................................................................................................................................................................................................................................2016935.00693568731381427
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGG............................................................................................................................................................................................................2016392.006392399136122425603
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCA..........................................................................................................................................................................................................2213878.00387830147821091584
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATG..............................................................................................................................................................................................................2033453.331036010983008658135376
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGC...........................................................................................................................................................................................................2113087.00308715311453362479
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAA........................................................................................................................................................................................................................................................2112147.0021472098781420
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAA.......................................................................................................................................................................................................................................................2211937.0019371842822362
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAAGA.....................................................................................................................................................................................................................................................2411629.0016291117610249247
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAAGAT....................................................................................................................................................................................................................................................2511043.0010433631212387269
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGA...........................................................................................................................................................................................................211845.0084556013821
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGCT..........................................................................................................................................................................................................243594.001782332639912772
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAG..........................................................................................................................................................................................................................................................191493.00493308271925114
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATG..............................................................................................................................................................................................................183472.00141676842030576
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGG.........................................................................................................................................................................................................................................................201472.004724720000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGAT...............................................................................................................................................................................................................193464.00139257315872940
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCT..........................................................................................................................................................................................................223349.00104716829513481
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAAGATA...................................................................................................................................................................................................................................................261219.00219121005840
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGG............................................................................................................................................................................................................221210.00210515135154
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGC...........................................................................................................................................................................................................231157.0015782523290
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGA................................................................................................................................................................................................................184133.7553522160156341
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGT.............................................................................................................................................................................................................193120.673622511353
...........................................................................................................................................................................................................................................................................ACAGCCAGCTTTGATGGG............................................................................................................................................................................................................181115.001150004111
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAAG......................................................................................................................................................................................................................................................231106.00106381252130
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGT...........................................................................................................................................................................................................212100.5020100133167
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCAA.........................................................................................................................................................................................................23199.00991306629
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATGGG............................................................................................................................................................................................................21197.0097370582
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATG..............................................................................................................................................................................................................19396.33289172001368
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGG.............................................................................................................................................................................................................19194.00947314007
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCAT.........................................................................................................................................................................................................23181.00810103941
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGCA..........................................................................................................................................................................................................24164.00640004024
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGT.............................................................................................................................................................................................................21363.6719113765142
...........................................................................................................................................................................................................................................................................ACAGCCAGCTTTGATGGGCA..........................................................................................................................................................................................................20162.00620102833
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGG.............................................................................................................................................................................................................21160.0060497022
...........................................................................................................................................................................................................................................................................ACAGCCAGCTTTGATGGGC...........................................................................................................................................................................................................19154.0054000549
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATGGGC...........................................................................................................................................................................................................22136.00361302012
..........................................................................................................................................................................................................................................................................CACAGCCAGCTTTGATGGGCA..........................................................................................................................................................................................................21131.0031080149
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAAGAA....................................................................................................................................................................................................................................................25129.0029250022
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGA............................................................................................................................................................................................................20127.0027320022
..........................................................................................................................................................................................................................................................................CACAGCCAGCTTTGATGGGC...........................................................................................................................................................................................................20126.00260110114
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAA..........................................................................................................................................................................................................................................................19126.0026241010
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAA...........................................................................................................................................................................................................................................................18126.0026190061
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAAGG.....................................................................................................................................................................................................................................................24126.0026260000
..........................................................................................................................................................................................................................................................................CACAGCCAGCTTTGATGGG............................................................................................................................................................................................................19123.00230100013
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAAGATAT..................................................................................................................................................................................................................................................27120.002013088
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATA..............................................................................................................................................................................................................20319.675922201025
..........................................................................................................................................................................................................................................................................CACAGCCAGCTTTGATGGGCAA.........................................................................................................................................................................................................22117.0017000116
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAAGC.....................................................................................................................................................................................................................................................24117.0017160001
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATGGGT...........................................................................................................................................................................................................22216.00320002111
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGT............................................................................................................................................................................................................20114.0014020111
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATT..............................................................................................................................................................................................................20313.33401140223
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAAA......................................................................................................................................................................................................................................................23113.0013100003
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGC............................................................................................................................................................................................................20113.001310039
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGA...........................................................................................................................................................................................................23113.001302038
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGAA...............................................................................................................................................................................................................19412.50501161131
..........................................................................................................................................................................................................................................................................CACAGCCAGCTTTGATGGGCAT.........................................................................................................................................................................................................22112.001210065
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCG..........................................................................................................................................................................................................22112.001220028
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGT.........................................................................................................................................................................................................................................................20111.001190002
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCAG.........................................................................................................................................................................................................23111.001130008
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGAT...............................................................................................................................................................................................................18310.0030026013
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATC..............................................................................................................................................................................................................20310.0030120108
.............................................................................................................................................................................................................................CATCAAAAAGGGCTGAAGA.........................................................................................................................................................................................................................................................19110.001082000
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATGGGCT..........................................................................................................................................................................................................2339.67290411212
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCAAA........................................................................................................................................................................................................2419.00903051
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAAGATT...................................................................................................................................................................................................................................................2619.00950013
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGAAA..............................................................................................................................................................................................................2049.00363401118
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGCT...........................................................................................................................................................................................................2318.00800062
...........................................................................................................................................................................................................................................................................ACAGCCAGCTTTGATGGGA...........................................................................................................................................................................................................1918.00800008
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGCC..........................................................................................................................................................................................................2418.00860011
..............................................................................................................................................................................................................................ATCAAAAAGGGCTGAAGAAAGAT....................................................................................................................................................................................................................................................2318.00800080
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGC.........................................................................................................................................................................................................................................................2017.00761000
..............................................................................................................................................................................................................................ATCAAAAAGGGCTGAAGA.........................................................................................................................................................................................................................................................1817.00751001
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCC..........................................................................................................................................................................................................2217.00720005
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATGGGA...........................................................................................................................................................................................................2217.00700016
..............................................................................................................................................................................................................................ATCAAAAAGGGCTGAAGAAAGA.....................................................................................................................................................................................................................................................2216.00610032
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGCG..........................................................................................................................................................................................................2416.00600024
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAAGATAA..................................................................................................................................................................................................................................................2716.00610050
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGCAA.........................................................................................................................................................................................................2515.00500050
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAAGAC....................................................................................................................................................................................................................................................2515.00540001
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCAC.........................................................................................................................................................................................................2314.00400022
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGCA...........................................................................................................................................................................................................2114.00400013
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGAAGAAT.......................................................................................................................................................................................................................................................2214.00440000
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATGGA............................................................................................................................................................................................................2114.00401012
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATT..............................................................................................................................................................................................................1834.0012200010
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATGGGCA..........................................................................................................................................................................................................2314.00400031
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGC.............................................................................................................................................................................................................2133.671115014
...........................................................................................................................................................................................................................................................................ACAGCCAGCTTTGATGGGCT..........................................................................................................................................................................................................2033.331000055
.............................................................................................................................................................................................................................CATCAAAAAGGGCTGAAG..........................................................................................................................................................................................................................................................1813.00303000
.............................................................................................................................................................................................................................CATCAAAAAGGGCTGAAGAAAGA.....................................................................................................................................................................................................................................................2313.00302001
.............................................................................................................................................................................................................................CATCAAAAAGGGCTGAAGAAA.......................................................................................................................................................................................................................................................2113.00321000
..........................................................................................................................................................................................................................................................................CACAGCCAGCTTTGATGGGA...........................................................................................................................................................................................................2013.00300003
droVir3
TAAG--AGTTC--------------------------------------------------GAGTG--------------------------CGTGCGTGCCT-GTGTGT--GTGTG----------------T----G---TGTGTGTGC--GCGTG---------TGT--------------------------GTGTACATGT-CTTACTTTCAATGTCATCAAAAAGGGCTGA-GAATGATATATCTGCAATTGAATCGTATCACAGCCAGCTTTGATGGGCATTGCAAAGGGCAACG-TAG------C-----AGAAAA-GTAACAAATAAC-----------------------------G----------CCAT---------------------------------AAA---CA-G------------G--------------------------ACTAC--------AACAAACCCAACASizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATG..............................................................................................................................................................................................................2035132.331539736180345343245710392180092736380215474419265147626420581881892231311587130177418276411290768452531300010002000000000182748673054242134464631575120200
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGA-GAAT.......................................................................................................................................................................................................................................................2114265.00426517431134420010104000013561316381424815900000853901000003131000110232112131001516715000101091100102104
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGAT...............................................................................................................................................................................................................1931373.33412021131223893785140000176116531281311241622141601295127512925930614943915175141319121031250000000000000000000136110011000011214200000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCA..........................................................................................................................................................................................................2211231.00123113121970000000000137573779644541271260100067412000300010000000000001000002134154600002000000000000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGA-GAATGAT....................................................................................................................................................................................................................................................2411090.0010902259713420000000000602710332130025370000002000100010010000040447653223112014393000104027102012111
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGC...........................................................................................................................................................................................................2111045.0010453251222280101000001855621636840210880001009744110000000000000000021000024389300013101000010120
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGG............................................................................................................................................................................................................201722.007226761444000000100007431224933211547401000109514010000010000000000000100001248200000000000001000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGA-GAATGA.....................................................................................................................................................................................................................................................231571.005711324276400000000004621102410719110000002010000010100000100202232320212441600001406000014030
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGA-GA.........................................................................................................................................................................................................................................................191540.00540143511410000000000109449601460000010010000000000000000001000000500724000000013100000000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGA-GAATG......................................................................................................................................................................................................................................................221537.0053717191261010000000005027102024201318000100100000000000010001010120221010725216000002018001011401
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATC..............................................................................................................................................................................................................203236.337094010201212000000087221171828106363711198371400700001323000000000000000000005300026301002220321
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGA................................................................................................................................................................................................................184193.00772343552410251801151042310814711341027373010189384416497418498482700000000000012000016180311597312223110020
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGA-GAA........................................................................................................................................................................................................................................................201175.0017579112000000000064347405500000100200000000000301001021011007304200000104000000101
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGCT..........................................................................................................................................................................................................243162.3348700522221851635002067003017124432454107413311331200100000000000000001119221003801001211100000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGT.............................................................................................................................................................................................................213148.334450038028230200101711315951525133222037583474061100370000000000000000000035900010001000000000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCT..........................................................................................................................................................................................................223144.334330571481313421020311043375231811191122741531102011514000001000010000000075672900212000000100000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGA-GAATGATA...................................................................................................................................................................................................................................................251130.0013005918010000000032212315200100001000000000000100201140013000734000000404000001011
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCAT.........................................................................................................................................................................................................231127.001270032000000000019946111201919000001002000000000000000000000000000317000000000000000000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATG..............................................................................................................................................................................................................183123.6737112122343001112000016656464131721221132372313100012000000000000010101105001011155106510000
..........................................................................................................................................................................................................................................................................CACAGCCAGCTTTGATGGGCAT.........................................................................................................................................................................................................221121.00121001000000000001978611701916000001000001000000000000000000000000322000000000000000000
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATG..............................................................................................................................................................................................................193107.33322122810010000000022121203301021420400000000000000000000000000007000000000000000000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGG............................................................................................................................................................................................................22196.0096111503011000010401110402435413231013200235000000000000000000022200100000100100000
..........................................................................................................................................................................................................................................................................CACAGCCAGCTTTGATGGGCA..........................................................................................................................................................................................................21182.00820060000000000014729652126000000100000000000000000000000000000210000000000000000000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGC...........................................................................................................................................................................................................23175.007501722000000100021000004010001212100101000000000000100100000251001046210001010001
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATA..............................................................................................................................................................................................................20367.332020136002000100012223110832761141220112371497430000000000000000000016000010000000000000
..........................................................................................................................................................................................................................................................................CACAGCCAGCTTTGATGGGCAA.........................................................................................................................................................................................................22150.00500001000000000082324126600000001001000000000000000000000000049000000000000000000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGA...........................................................................................................................................................................................................21149.004901300000000000331312025000000000000000000000000000000000000023200000000000000000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGA-GAATGG.....................................................................................................................................................................................................................................................23149.004924700000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATT..............................................................................................................................................................................................................20341.33124001600000000000605372294300006141117010000110000000000000000000013200000000010000000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCAA.........................................................................................................................................................................................................23141.00410010000000000042241208600000000000000000000000000000000000029000000000000000000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGG.............................................................................................................................................................................................................21139.003912103000100000012000010010021100300000000000000000000000000002000221000101100000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGA-GAATT......................................................................................................................................................................................................................................................22139.003913500000000000000001000000000000000000000000000000000000000100000000001000000000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGT...........................................................................................................................................................................................................21138.00380132000000000022072002300000110000000001000000000000000000029000000000000000000
..........................................................................................................................................................................................................................................................................CACAGCCAGCTTTGATGGGC...........................................................................................................................................................................................................20133.003300100000000000040210205800000000000000000000000000000000001000000000000000000000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATCC.............................................................................................................................................................................................................21331.339441380000001000000011140100000766902000027000000000000000000000000000100001000001
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGG.............................................................................................................................................................................................................19130.003019180000000000000000000100000000000000000000000000000000000000100000000000000000
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATGGG............................................................................................................................................................................................................21129.00290073000000000000131002200000000300000000000000000000000000033100000000000000000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGA-GG.........................................................................................................................................................................................................................................................19228.005615500000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGAA...............................................................................................................................................................................................................19428.00112112201020000000424301012301106848130002220000000000000000000018000031000000002102
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGA-GAAC.......................................................................................................................................................................................................................................................21126.002602501000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGAAA..............................................................................................................................................................................................................20524.4012201500011000100001111031200216104403010321000000000000000000007100014155000000313611
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATGGGC...........................................................................................................................................................................................................22124.002400314000000000001011001100000000000000000000000000010000000100000000000000000000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGA-GAAA.......................................................................................................................................................................................................................................................21122.002231000010000000010000201000000000100000000000000000000000000002000000001000000000
...........................................................................................................................................................................................................................................................................ACAGCCAGCTTTGATGGGCA..........................................................................................................................................................................................................20121.00210010000000000030122201100000000000000000000000000000000000035000000000000000000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGC.............................................................................................................................................................................................................21318.67560000110000000075230053281010000112000014000000000000000000016000001000000000000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGA-G..........................................................................................................................................................................................................................................................18218.00360740000100000000117201200000000100000002000000000000000000006100000000000000000
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATGGGT...........................................................................................................................................................................................................22116.00160002000000000020010002200000000000000000000000000000000000034000000000000000000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGA-GAATGAC....................................................................................................................................................................................................................................................24116.001601204000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGCA..........................................................................................................................................................................................................24115.00150010000000000021032001000001000010000000000000000000000000030000000000000000000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGA-GAATGATAT..................................................................................................................................................................................................................................................26115.00150300000000000000000010000000102600000000000000000000000000110000000000000000000
..........................................................................................................................................................................................................................................................................CACAGCCAGCTTTGATGGG............................................................................................................................................................................................................19114.001401100000000000010001000100000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGA-GAATGATT...................................................................................................................................................................................................................................................25114.001401200000000000000000001000000000000000000000000000100000000000000000000000000000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGA-GAATGATAA..................................................................................................................................................................................................................................................26114.00140710000000000000000000000000000000000000010000000010100001200000000000000000000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGA-GAATGATATATCTGCAATTGAATCGTA................................................................................................................................................................................................................................44113.00130000000000000000000000000000000000000000000100101111100001500000000000000000000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGT.............................................................................................................................................................................................................19312.673800300000000000101120033200001234000000000000000000000000000012000000000000000000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGACC..............................................................................................................................................................................................................20411.25452070200000000001000050100000552800000021000000000000000000000000000100000001011
...........................................................................................................................................................................................................................................................................ACAGCCAGCTTTGATGGGC...........................................................................................................................................................................................................19111.00110030000000000010000003200000000000000000000000000001001000000000000000000000000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCC..........................................................................................................................................................................................................22111.00110005000000000000001000000000000000000000000000000000000000014000000000000000000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGA-GAATGATC...................................................................................................................................................................................................................................................25111.00110005000000000000000000000000000000000000000001100001100000200000000000000000000
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGAT...............................................................................................................................................................................................................18310.333100230000000000002001110000000011100000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGA-GAATGATATAT................................................................................................................................................................................................................................................28110.00100000000000000000000000000000000000000000000001000113100000200100000000000000000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGTT..........................................................................................................................................................................................................2239.332800050000000000300130041000000000000000000000000000000000000011000000000000000000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGCTC.........................................................................................................................................................................................................2539.00272001050000000000000040010000000203000018000000000000000000000000000000000000000
.............................................................................................................................................................................................................................CATCAAAAAGGGCTGA-GAAT.......................................................................................................................................................................................................................................................2019.0090520000000000000001001000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGCA............................................................................................................................................................................................................2238.332500000000000000000100110200000001002106010000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................GTATCACAGCCAGCTTTGATG..............................................................................................................................................................................................................2118.0080080000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATCC.............................................................................................................................................................................................................1947.25290000010002000000000132100001332401000102000000000000000000000000000001000100000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCG..........................................................................................................................................................................................................2217.0070110000000000000000000100000000000000000000000000000000000004000000000000000000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGT...........................................................................................................................................................................................................2317.0070001001000000001000000000000000000000000000000000000000000040000000000000000000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGTT............................................................................................................................................................................................................2236.00180420001000000000010030000000021200000000000000000000000001001000000000000000000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGCAA.........................................................................................................................................................................................................2516.0060000000000000000000000010000000000100030000000000000000000000001000000000000000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGA-GT.........................................................................................................................................................................................................................................................1925.501101000000000000000000000000000000000000000000000000000000001000000000000000000000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGTC............................................................................................................................................................................................................2235.33160020000000000001030021000000101100000011000000000000000000001100000000000000000
..............................................................................................................................................................................................................................ATCAAAAAGGGCTGA-GAATGAT....................................................................................................................................................................................................................................................2215.0050200000000000010000000100000000000000000000000000000000000001000000000000000000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGA-GAATGAA....................................................................................................................................................................................................................................................2415.0051200000000000000000001100000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGA-GAAG.......................................................................................................................................................................................................................................................2115.0050500000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATCCC............................................................................................................................................................................................................2235.001511030000000000000000000000000000000000000000000000000000000000000000000010000000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCTC.........................................................................................................................................................................................................2335.00150000000000000000000050000001110002000011000000000000000000011100000000000000000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGCC..........................................................................................................................................................................................................2415.0050003000000000000000000000000000100000000000000000000000000000100000000000000000
..............................................................................................................................................................................................................................ATCAAAAAGGGCTGA-GAAT.......................................................................................................................................................................................................................................................1915.0050000000000000001000101200000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTG.................................................................................................................................................................................................................1744.75190000000000000000000000000000000000000000000000001021010001300000322000000020001
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGC............................................................................................................................................................................................................2014.0040010000000000000000000000000000000000000000000000000000000003000000000000000000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCAC.........................................................................................................................................................................................................2314.0040002000000000010000000000000000000000000000000000000000000001000000000000000000
..............................................................................................................................................................................................................................ATCAAAAAGGGCTGA-GAATGA.....................................................................................................................................................................................................................................................2114.0040200000000000000000000200000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................ACAGCCAGCTTTGATGGG............................................................................................................................................................................................................1814.0040100000000000000011000100000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGA............................................................................................................................................................................................................2214.0040010000000000000000000000000000000012000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATGG.............................................................................................................................................................................................................2014.0040030000000000000000000100000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGA...........................................................................................................................................................................................................2314.0040020000000000000000000100000000000000000000000000000000000000000100000000000000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGTA............................................................................................................................................................................................................2233.67110010010000000000000030000000102100101000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................ACAGCCAGCTTTGATGGGCT..........................................................................................................................................................................................................2033.67110000001000000001000100020000000000000010000000000000000000041000000000000000000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATCCA............................................................................................................................................................................................................2233.33100080000000000000000000000110000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATCT.............................................................................................................................................................................................................2133.0090021000000000000000000010000120100000001000000000000000000000000000000000000000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGA-GAATGATATATCTGCAATTGAATCGT.................................................................................................................................................................................................................................4313.0030000000000000000000000000000000000000000000000000010001000100000000000000000000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATC..............................................................................................................................................................................................................1833.0091000000000000000000000100000231100000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATGGGCA..........................................................................................................................................................................................................2313.0030002000000000000000000000000000000000000000000000000000000001000000000000000000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGA-GAATGATATA.................................................................................................................................................................................................................................................2713.0030000000000000000000000000000001000000000000000000000100001000000000000000000000
......................................................................................................................................................................................................................................................................GTATCACAGCCAGCTTTGATGA.............................................................................................................................................................................................................2233.0090080000000000010000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................CAGCCAGCTTTGATGGGCA..........................................................................................................................................................................................................1913.0030010000000000010010000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................TGCAATTGAATCGTATCACAGCCAGC.....................................................................................................................................................................................................................2613.0030000000000000000000000000000110100000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCATT........................................................................................................................................................................................................2413.0030001000000000000000000100000000000000000000000000000000000001000000000000000000
....................................................................................................................................................................................................................................................TATATCTGCAATTGAATCGTATCACAGCCAGCTTTGATGGGC...........................................................................................................................................................................................................4213.0030000000000000000000000000000000000000000000000000001001000100000000000000000000
.............................................................................................................................................................................................................................CATCAAAAAGGGCTGA-GA.........................................................................................................................................................................................................................................................1813.0030021000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................CACAGCCAGCTTTGATGGGCAC.........................................................................................................................................................................................................2213.0030011000000000000010000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGA-GAATGT.....................................................................................................................................................................................................................................................2313.0030100000000000020000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATT..............................................................................................................................................................................................................1832.6780100010000000000000000100000030000000001000000000000000000001000000000000000000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATA..............................................................................................................................................................................................................1832.6780000000000000000000000000010220000100000000000000000000000001000000000000000010
...........................................................................................................................................................................................................................................................................ACAGCCAGCTTTGATG..............................................................................................................................................................................................................1632.6780000000000000000000000000000000000000000000000000000000000008000000000000000000
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATC..............................................................................................................................................................................................................1932.6780080000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGAT...............................................................................................................................................................................................................1732.6780000000000000000000000000000000000000000000000000000000000002001020000000010101
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGA-GAATA......................................................................................................................................................................................................................................................2222.5050000000000000010000000100000000000000000000000000000000000000000000003000000000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGAC...............................................................................................................................................................................................................1942.50100130010000000000000000000000200100000010000000000000000000001000000000000000000
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGCT............................................................................................................................................................................................................2232.3370000000000000000000040010100000000000001000000000000000000000000000000000000000
droMoj3
CGTTTACAC------------------------------------------GG--------GTGTG--------------------------C--------CA-GTGTAT--GTGTGA--------------------G---TGTGTAT------GTT---------TGT------------GTGT------A-CATGCTTG--GT-CTTACTTTCAGTGTCATCAAAAAGGGCTGA-GAATGATATTTCTGTAATTGAATTGTATCACAGCCAGCTTTGATGGGCACTGCGAAGGGCGAAG-TAA------C-----AGT---------------------------------------------AACAT---TAACAGTAAGAGAGAAAAAAAAAA----AA----------AAA---AA-CGG-AA-AC--AAA---------------------------A---------TT------TATAGGTSizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATG..............................................................................................................................................................................................................2031867.335602412413541650033691
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCA..........................................................................................................................................................................................................2211506.00150612231275998944
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGC...........................................................................................................................................................................................................2111497.0014971734464412246
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGCT..........................................................................................................................................................................................................243758.332275173244670177939
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGC...........................................................................................................................................................................................................231539.005391911205061
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATGGGC...........................................................................................................................................................................................................221486.0048684034701
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGAT...............................................................................................................................................................................................................193448.00134441164024821825
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCT..........................................................................................................................................................................................................223420.6712621619912016171947
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGG............................................................................................................................................................................................................201341.0034122853827358
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGCC..........................................................................................................................................................................................................241235.0023500002350
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGA-GAATGAT....................................................................................................................................................................................................................................................241203.0020321717509612
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGA-GA.........................................................................................................................................................................................................................................................191196.0019615045871831
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCC..........................................................................................................................................................................................................221194.0019401011920
..........................................................................................................................................................................................................................................................................CACAGCCAGCTTTGATGGGCAT.........................................................................................................................................................................................................221191.001915114983403
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGA-GAAT.......................................................................................................................................................................................................................................................211171.0017150020631820
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGA-GAATGA.....................................................................................................................................................................................................................................................231164.0016410314547310
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATGGGT...........................................................................................................................................................................................................221138.00138122011140
..........................................................................................................................................................................................................................................................................CACAGCCAGCTTTGATGGGCA..........................................................................................................................................................................................................211123.0012324162430272
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGTT..........................................................................................................................................................................................................22395.002850146192460
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATG..............................................................................................................................................................................................................19392.3327726303740
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGT...........................................................................................................................................................................................................21175.00756131013303
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGA-GAATG......................................................................................................................................................................................................................................................22174.00742121022811
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGG............................................................................................................................................................................................................22172.0072241797132
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGA................................................................................................................................................................................................................18470.75283451663481074
..........................................................................................................................................................................................................................................................................CACAGCCAGCTTTGATGGGCAA.........................................................................................................................................................................................................22162.0062316625120
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGA...........................................................................................................................................................................................................21158.005850232604
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCAT.........................................................................................................................................................................................................23155.0055251617150
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGA-GAATGATA...................................................................................................................................................................................................................................................25153.005315710291
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGT.............................................................................................................................................................................................................21347.67143381385934
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATG..............................................................................................................................................................................................................18343.001294204135110
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGA-GAA........................................................................................................................................................................................................................................................20141.00417078163
..........................................................................................................................................................................................................................................................................CACAGCCAGCTTTGATGGGC...........................................................................................................................................................................................................20139.003911060220
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATGGG............................................................................................................................................................................................................21139.003914134161
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATC..............................................................................................................................................................................................................20332.00968523321
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGG.............................................................................................................................................................................................................21126.002610010150
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGCA..........................................................................................................................................................................................................24125.00250720160
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCTG.........................................................................................................................................................................................................23324.67740692210
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGTC..........................................................................................................................................................................................................22124.00240010230
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGA-G..........................................................................................................................................................................................................................................................18122.0022314860
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGG.............................................................................................................................................................................................................19121.00211800210
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGT.............................................................................................................................................................................................................19418.757550333412
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCAA.........................................................................................................................................................................................................23116.0016146320
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATT..............................................................................................................................................................................................................20315.334690161911
...........................................................................................................................................................................................................................................................................ACAGCCAGCTTTGATGGGCA..........................................................................................................................................................................................................20115.0015154320
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATA..............................................................................................................................................................................................................20314.67443224240
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCAC.........................................................................................................................................................................................................23114.00140010130
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGA-GT.........................................................................................................................................................................................................................................................19113.0013206500
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATGGGCT..........................................................................................................................................................................................................23312.33373110320
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGAT...............................................................................................................................................................................................................18312.00363202200
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGA-GAAA.......................................................................................................................................................................................................................................................21110.0010001540
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATGGGA...........................................................................................................................................................................................................2219.009130041
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGC.............................................................................................................................................................................................................2138.67261523501
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGAA...............................................................................................................................................................................................................1948.253316151001
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCG..........................................................................................................................................................................................................2218.008122111
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGCG..........................................................................................................................................................................................................2418.008011060
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGA-GAATGATAT..................................................................................................................................................................................................................................................2618.008000251
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGA-GAATGAC....................................................................................................................................................................................................................................................2418.008000080
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATGGGCC..........................................................................................................................................................................................................2318.008000080
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGT...........................................................................................................................................................................................................2318.008000080
..........................................................................................................................................................................................................................................................................CACAGCCAGCTTTGATGGGCT..........................................................................................................................................................................................................2137.0021613290
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATGGGCA..........................................................................................................................................................................................................2317.007000070
..........................................................................................................................................................................................................................................................................CACAGCCAGCTTTGATGGG............................................................................................................................................................................................................1916.006501000
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATGGTT...........................................................................................................................................................................................................2216.006000060
......................................................................................................................................................................................................................................................................GTATCACAGCCAGCTTTGATGA.............................................................................................................................................................................................................2235.33161600000
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGATG.........................................................................................................................................................................................................2345.25210210000
...........................................................................................................................................................................................................................................................................ACAGCCAGCTTTGATGGGC...........................................................................................................................................................................................................1915.005111110
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATGG.............................................................................................................................................................................................................2015.005200030
..........................................................................................................................................................................................................................................................................CACAGCCAGCTTTGATGGGCAC.........................................................................................................................................................................................................2215.005100040
...........................................................................................................................................................................................................................................................................ACAGCCAGCTTTGATGGGCAT.........................................................................................................................................................................................................2115.005101300
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGAC..........................................................................................................................................................................................................2414.004010030
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGTG..........................................................................................................................................................................................................2214.004001300
............................................................................................................................................................................................................................................................................CAGCCAGCTTTGATGGGC...........................................................................................................................................................................................................1814.004000040
..........................................................................................................................................................................................................................................................................CACAGCCAGCTTTGATGGGCC..........................................................................................................................................................................................................2114.004000040
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGT............................................................................................................................................................................................................2014.004001300
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGA-GAATTT.....................................................................................................................................................................................................................................................2314.004101200
..........................................................................................................................................................................................................................................................................CACAGCCAGCTTTGATGG.............................................................................................................................................................................................................1814.004300010
...........................................................................................................................................................................................................................................................................ACAGCCAGCTTTGATGGGCAA.........................................................................................................................................................................................................2114.004101110
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGAC...............................................................................................................................................................................................................1943.75150000150
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGTT..........................................................................................................................................................................................................2433.6711060050
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGAAA..............................................................................................................................................................................................................2063.6722707350
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGAT..........................................................................................................................................................................................................2233.3310170200
......................................................................................................................................................................................................................................................................GTATCACAGCCAGCTTTGATG..............................................................................................................................................................................................................2113.003300000
...........................................................................................................................................................................................................................................................................ACAGCCAGCTTTGATGGG............................................................................................................................................................................................................1813.003001110
.............................................................................................................................................................................................................................CATCAAAAAGGGCTGA-GA.........................................................................................................................................................................................................................................................1813.003200010
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGA-GAAC.......................................................................................................................................................................................................................................................2113.003000030
droGri2
CGTTTACAT--------------CA------------------------------------GTGTGCTTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTTTTT-GT------GTGTGTGTG------------TGTGTG---TGTGTGT------GTT---------TGT------------GT--------------GTACATGT-CTTACTTTCAATGTCATCAAAAAGGGCTGA-GAATGATATATCTGCAATTGAATCGTATCACAGCCAGCTTTGATGGGCATTGCAAAGGGCAATG-TAG------C-----AA-AAA-GAG--------------------------------------------------TAT---------------------------------TAC---TT-CGC-CA-AC--AAT--------------------------AT-----------------TACAACASizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATG..............................................................................................................................................................................................................203571.671715168134
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGAT...............................................................................................................................................................................................................19371.002132094
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATG..............................................................................................................................................................................................................19339.001171170
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGC...........................................................................................................................................................................................................21134.0034340
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGG............................................................................................................................................................................................................20128.0028280
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCA..........................................................................................................................................................................................................22118.0018171
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGA-GAATGAT....................................................................................................................................................................................................................................................24116.001697
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATG..............................................................................................................................................................................................................18314.0042420
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGC...........................................................................................................................................................................................................23110.0010100
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGCT..........................................................................................................................................................................................................2439.6729524
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGA................................................................................................................................................................................................................1849.5038380
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGCT..........................................................................................................................................................................................................2239.3328721
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGA-GAAT.......................................................................................................................................................................................................................................................2118.00853
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGA-GAATG......................................................................................................................................................................................................................................................2216.00615
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGG.............................................................................................................................................................................................................2116.00660
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGA-GAATGA.....................................................................................................................................................................................................................................................2316.00642
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGAT...............................................................................................................................................................................................................1835.0015150
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATT..............................................................................................................................................................................................................2035.0015141
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGA-GAATGATA...................................................................................................................................................................................................................................................2515.00541
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGG.............................................................................................................................................................................................................1915.00550
......................................................................................................................................................................................................................................................................GTATCACAGCCAGCTTTGATGA.............................................................................................................................................................................................................2234.0012120
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGT.............................................................................................................................................................................................................2133.6711101
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGG............................................................................................................................................................................................................2213.00330
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGA...........................................................................................................................................................................................................2112.00211
..........................................................................................................................................................................................................................................................................CACAGCCAGCTTTGATGGGC...........................................................................................................................................................................................................2012.00220
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATA..............................................................................................................................................................................................................2031.00330
.........................................................................................................................................................................................................................................................................TCACAGCCAGCTTTGATGGGTG..........................................................................................................................................................................................................2211.00110
................................................................................................................................................................................................................................CAAAAAGGGCTGA-GAATGAT....................................................................................................................................................................................................................................................2011.00110
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGGGCA..........................................................................................................................................................................................................2411.00110
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATGGG............................................................................................................................................................................................................2111.00110
.............................................................................................................................................................................................................................CATCAAAAAGGGCTGA-GAAT.......................................................................................................................................................................................................................................................2011.00110
.............................................................................................................................................................................................................................CATCAAAAAGGGCTGA-GAATGAT....................................................................................................................................................................................................................................................2311.00110
..........................................................................................................................................................................................................................................................................CACAGCCAGCTTTGATGG.............................................................................................................................................................................................................1811.00110
......................................................................................................................................................................................................................................................................GTATCACAGCCAGCTTTGATG..............................................................................................................................................................................................................2111.00110
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGA-GAA........................................................................................................................................................................................................................................................2011.00110
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGAA...............................................................................................................................................................................................................1941.00440
...........................................................................................................................................................................................................................................................................ACAGCCAGCTTTGATGGGC...........................................................................................................................................................................................................1911.00110
............................................................................................................................................................................................................................TCATCAAAAAGGGCTGA-GA.........................................................................................................................................................................................................................................................1911.00101
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATGG.............................................................................................................................................................................................................2011.00110
........................................................................................................................................................................................................................................................................ATCACAGCCAGCTTTGATGGGCT..........................................................................................................................................................................................................2330.33110
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATGC.............................................................................................................................................................................................................2130.33110
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGATC..............................................................................................................................................................................................................2030.33110
.......................................................................................................................................................................................................................................................................TATCACAGCCAGCTTTGCC...............................................................................................................................................................................................................1960.17110

Generated: 10/20/2015 at 07:28 PM