ID:

dse-mir-286

 Coordinate:

scaffold_1:13063657-13063755 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

3pUTR

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-28.5 -28.5 -28.5

Flybase annnotation

utr3 [utr3_minus_3618]; pre_miRNA [Dsec\mir-286-RM]; miRNA [Dsec\miR-286-RA]

No Repeatable elements found

Sense Strand Reads

CAAATCAACAATCAAAAAATCAAGAGTAAGTTATATTGGGCACTCCAGTTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCCAATAAAGGTTTCGATCAAGCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCTCAGTGAAGTTGCAAGTGAAACTTCAAATATTCTGTGG

***********************************************((((((((((((....((((.(((((((.(((((.((((..((......))............)))).))))).)))).))).))))....))))))))))))..*********************************************** 		Read size # Mismatch Hit Count Total Norm Total V114

embryo

 V115

head

 M054

female body

 V113

male body
..................................................................................................................TGACTAGACCGAACACTCGTGCT.............................................................. 23 0 1 271567.00 271567 264048 6136 1362 21
..................................................................................................................TGACTAGACCGAACACTCGTGC............................................................... 22 0 1 10716.00 10716 10498 149 66 3
..................................................................................................................TGACTAGACCGAACACTCGTGCTT............................................................. 24 1 1 2288.00 2288 2255 23 7 3
..................................................................................................................TGACTAGACCGAACACTCGTG................................................................ 21 0 1 1158.00 1158 1128 18 10 2
..................................................................................................................TGACTAGACCGAACATTCGTGCT.............................................................. 23 1 1 928.00 928 924 4 0 0
..................................................................................................................TGACTAGACCGAATACTCGTGCT.............................................................. 23 1 1 927.00 927 924 2 1 0
..................................................................................................................TGACTAGACCGAACACTTGTGCT.............................................................. 23 1 1 822.00 822 816 4 2 0
..................................................................................................................TGACTAGATCGAACACTCGTGCT.............................................................. 23 1 1 612.00 612 604 7 1 0
..................................................................................................................TGACTAGACTGAACACTCGTGCT.............................................................. 23 1 1 555.00 555 544 8 3 0
..................................................................................................................TGACTAGACCGAACACTCGCGCT.............................................................. 23 1 1 527.00 527 517 10 0 0
..................................................................................................................TGACTAGACCGAACACCCGTGCT.............................................................. 23 1 1 519.00 519 516 3 0 0
..................................................................................................................TGACTAGACCGAACACTCGTGTT.............................................................. 23 1 1 497.00 497 489 7 1 0
..................................................................................................................TGACTAGACCGAACCCTCGTGCT.............................................................. 23 1 1 494.00 494 486 8 0 0
..................................................................................................................TGACTAGACCGAACACTCGTGCC.............................................................. 23 1 1 482.00 482 466 12 4 0
..................................................................................................................TGATTAGACCGAACACTCGTGCT.............................................................. 23 1 1 451.00 451 448 3 0 0
..................................................................................................................TGACTAGACCGAACACTCGTGT............................................................... 22 1 1 440.00 440 432 6 1 1
..................................................................................................................TGACTAGACCGAGCACTCGTGCT.............................................................. 23 1 1 397.00 397 389 6 2 0
..................................................................................................................TGACTAGGCCGAACACTCGTGCT.............................................................. 23 1 1 386.00 386 374 10 2 0
..................................................................................................................TGACTAGACCGAACACTCGTGCTA............................................................. 24 0 1 333.00 333 318 9 6 0
..................................................................................................................CGACTAGACCGAACACTCGTGCT.............................................................. 23 1 1 330.00 330 317 11 2 0
..................................................................................................................TGACTAGACCGGACACTCGTGCT.............................................................. 23 1 1 303.00 303 297 5 1 0
..................................................................................................................TGACTGGACCGAACACTCGTGCT.............................................................. 23 1 1 298.00 298 291 7 0 0
..................................................................................................................TGGCTAGACCGAACACTCGTGCT.............................................................. 23 1 1 292.00 292 281 5 6 0
..................................................................................................................TGACTAGACCGAACACTCGTCCT.............................................................. 23 1 1 292.00 292 282 7 3 0
..................................................................................................................TGACTAGACCGAACACTCTTGCT.............................................................. 23 1 1 261.00 261 247 7 7 0
..................................................................................................................TGACTAGACCGAACAATCGTGCT.............................................................. 23 1 1 260.00 260 259 1 0 0
..................................................................................................................TGACTAGACCAAACACTCGTGCT.............................................................. 23 1 1 245.00 245 236 6 3 0
..................................................................................................................TGACTAGACCGAACACTCGGGCT.............................................................. 23 1 1 242.00 242 223 13 6 0
..................................................................................................................TGACCAGACCGAACACTCGTGCT.............................................................. 23 1 1 239.00 239 236 3 0 0
..................................................................................................................TGACTAGACCGAACACTCGTTCT.............................................................. 23 1 1 227.00 227 202 10 15 0
..................................................................................................................TGACTAGACCGAACGCTCGTGCT.............................................................. 23 1 1 219.00 219 216 3 0 0
..................................................................................................................TGACTAGACCGAAAACTCGTGCT.............................................................. 23 1 1 205.00 205 204 1 0 0
...................................................................................................................GACTAGACCGAACACTCGTGCT.............................................................. 22 0 1 204.00 204 99 2 103 0
..................................................................................................................TGACTAGACCGAACTCTCGTGCT.............................................................. 23 1 1 203.00 203 202 1 0 0
..................................................................................................................TGACTAGACCGAACACTCGTGCTAT............................................................ 25 0 1 192.00 192 187 3 2 0
..................................................................................................................TGACTAGACCGAACACTCATGCT.............................................................. 23 1 1 188.00 188 179 7 1 1
..................................................................................................................TGACTAGACCGAACACTCCTGCT.............................................................. 23 1 1 171.00 171 167 3 1 0
..................................................................................................................TGACTAGACCGCACACTCGTGCT.............................................................. 23 1 1 163.00 163 161 2 0 0
..................................................................................................................TGACTAGACCGACCACTCGTGCT.............................................................. 23 1 1 157.00 157 153 4 0 0
..................................................................................................................TGACTAGACAGAACACTCGTGCT.............................................................. 23 1 1 155.00 155 149 6 0 0
..................................................................................................................TGACTTGACCGAACACTCGTGCT.............................................................. 23 1 1 154.00 154 153 1 0 0
..................................................................................................................TGACTATACCGAACACTCGTGCT.............................................................. 23 1 1 142.00 142 135 5 2 0
..................................................................................................................TGACTAGACCGAACACTCGT................................................................. 20 0 1 140.00 140 133 3 2 2
..................................................................................................................TGACTAGACCCAACACTCGTGCT.............................................................. 23 1 1 135.00 135 133 1 1 0
..................................................................................................................TGACTAGACCGAACACTCGTACT.............................................................. 23 1 1 134.00 134 119 9 6 0
..................................................................................................................TCACTAGACCGAACACTCGTGCT.............................................................. 23 1 1 131.00 131 123 7 1 0
..................................................................................................................TGACTAGAACGAACACTCGTGCT.............................................................. 23 1 1 130.00 130 118 4 8 0
..................................................................................................................TGACTAGACCGAACACTCGTGAT.............................................................. 23 1 1 128.00 128 116 12 0 0
..................................................................................................................TAACTAGACCGAACACTCGTGCT.............................................................. 23 1 1 128.00 128 118 9 1 0
..................................................................................................................TTACTAGACCGAACACTCGTGCT.............................................................. 23 1 1 124.00 124 115 4 5 0
..................................................................................................................TGACTACACCGAACACTCGTGCT.............................................................. 23 1 1 121.00 121 117 3 1 0
.................................................................................................................CTGACTAGACCGAACACTCGTGCT.............................................................. 24 1 1 115.00 115 113 1 1 0
..................................................................................................................TGACTAGACCGATCACTCGTGCT.............................................................. 23 1 1 112.00 112 111 1 0 0
..................................................................................................................TGACTAGACCGAACACACGTGCT.............................................................. 23 1 1 103.00 103 101 1 1 0
..................................................................................................................TGACTAAACCGAACACTCGTGCT.............................................................. 23 1 1 95.00 95 83 8 4 0
..................................................................................................................TGACTAGACCGAACACTCGTGCA.............................................................. 23 1 1 88.00 88 78 5 4 1
..................................................................................................................TGACTAGACCGTACACTCGTGCT.............................................................. 23 1 1 87.00 87 85 0 2 0
..................................................................................................................TGACTAGTCCGAACACTCGTGCT.............................................................. 23 1 1 81.00 81 79 2 0 0
....................................................................................................................ACTAGACCGAACACTCGTGCT.............................................................. 21 0 1 73.00 73 68 1 4 0
..................................................................................................................TGCCTAGACCGAACACTCGTGCT.............................................................. 23 1 1 72.00 72 69 3 0 0
..................................................................................................................TGACTAGACCGAACACTCGAGCT.............................................................. 23 1 1 65.00 65 60 5 0 0
..................................................................................................................TGACTAGACCGAACACTAGTGCT.............................................................. 23 1 1 65.00 65 59 5 1 0
..................................................................................................................TGACTAGCCCGAACACTCGTGCT.............................................................. 23 1 1 64.00 64 63 1 0 0
..................................................................................................................TGACTAGACCTAACACTCGTGCT.............................................................. 23 1 1 64.00 64 58 6 0 0
..................................................................................................................TGACTCGACCGAACACTCGTGCT.............................................................. 23 1 1 62.00 62 61 1 0 0
..................................................................................................................GGACTAGACCGAACACTCGTGCT.............................................................. 23 1 1 60.00 60 58 1 1 0
..................................................................................................................TGACTAGACCGAACACTCGTGCG.............................................................. 23 1 1 52.00 52 51 0 1 0
..................................................................................................................TGTCTAGACCGAACACTCGTGCT.............................................................. 23 1 1 51.00 51 49 2 0 0
..................................................................................................................TGAATAGACCGAACACTCGTGCT.............................................................. 23 1 1 50.00 50 40 3 7 0
..................................................................................................................AGACTAGACCGAACACTCGTGCT.............................................................. 23 1 1 49.00 49 46 2 1 0
..................................................................................................................TGACTAGACCGAACACTCGTGCTC............................................................. 24 1 1 48.00 48 47 1 0 0
..................................................................................................................TGACTAGATCGAACACTCGTGC............................................................... 22 1 1 47.00 47 47 0 0 0
..................................................................................................................TGACTAGACCGAACACTCGTCT............................................................... 22 2 1 45.00 45 39 2 4 0
..................................................................................................................TGACTAGACCGAACAGTCGTGCT.............................................................. 23 1 1 37.00 37 37 0 0 0
..................................................................................................................TGACTAGAGCGAACACTCGTGCT.............................................................. 23 1 1 36.00 36 36 0 0 0
....................................................................................TTTTCCAATAAAGGTTTCGATCAAGCG........................................................................................ 27 0 1 34.00 34 31 1 2 0
..................................................................................................................TGAGTAGACCGAACACTCGTGCT.............................................................. 23 1 1 33.00 33 33 0 0 0
..............................................................GGCGAATGTCGGTATGGTCTCT................................................................................................................... 22 0 1 32.00 32 27 0 5 0
..................................................................................................................TGACTAGACCGAACACTCGTGGT.............................................................. 23 1 1 32.00 32 31 1 0 0
..................................................................................................................TGACTAGACCGAATACTCGTGC............................................................... 22 1 1 31.00 31 31 0 0 0
..................................................................................................................TGACTAGACCGAACACTGGTGCT.............................................................. 23 1 1 28.00 28 26 2 0 0
..................................................................................................................TGACTAGACCGAACACTTGCT................................................................ 21 3 2 27.00 54 54 0 0 0
..................................................................................................................TGACTAGACCGAACACTCGTGCTTT............................................................ 25 1 1 26.00 26 25 0 1 0
..................................................................................................................TGACTAGACTGAACACTCGTGC............................................................... 22 1 1 25.00 25 25 0 0 0
..................................................................................................................TGACTAGACCGAAGACTCGTGCT.............................................................. 23 1 1 25.00 25 24 1 0 0
..................................................................................................................TGACTAGACCGAACACCCGTGC............................................................... 22 1 1 24.00 24 24 0 0 0
..................................................................................................................TGACTAGACCGAACACTCGTGA............................................................... 22 1 1 22.00 22 18 2 0 2
.......................................................................................................................AGACCGAACACTCGTGCT.............................................................. 18 0 1 21.00 21 21 0 0 0
.....................................................................................................................CTAGACCGAACACTCGTGCT.............................................................. 20 0 1 21.00 21 20 0 1 0
..................................................................................................................TGACTAGACCGAACACTCCT................................................................. 20 1 1 21.00 21 18 2 1 0
..................................................................................................................TGACTAGACCGAACATTCGTGC............................................................... 22 1 1 20.00 20 20 0 0 0
......................................................................................................................TAGACCGAACACTCGTGCT.............................................................. 19 0 1 20.00 20 19 0 1 0
..................................................................................................................TGACAAGACCGAACACTCGTGCT.............................................................. 23 1 1 20.00 20 17 3 0 0
..................................................................................................................TGACTAGGCCGAACACTCGTGC............................................................... 22 1 1 19.00 19 19 0 0 0
..................................................................................................................TGACTAGACGGAACACTCGTGCT.............................................................. 23 1 1 18.00 18 17 1 0 0
....................................................................................TTTTCCAATAAAGGTTTCGATCAAGC......................................................................................... 26 0 1 18.00 18 18 0 0 0
..................................................................................................................TGACTAGACCGAACACTC................................................................... 18 0 1 16.00 16 13 0 3 0
..................................................................................................................TGATTAGACCGAACACTCGTGC............................................................... 22 1 1 16.00 16 16 0 0 0
..................................................................................................................TGACTAGACCGAACACTCTTGC............................................................... 22 1 1 16.00 16 16 0 0 0
..................................................................................................................TGACTAGACCGAACACTCG.................................................................. 19 0 1 16.00 16 15 0 1 0
..................................................................................................................TGACTAGACCGAACCCTCGTGC............................................................... 22 1 1 15.00 15 15 0 0 0
..................................................................................................................TGACTAGACCGAGCACTCGTGC............................................................... 22 1 1 15.00 15 15 0 0 0
...................................................................................................................TACTAGACCGAACACTCGTGCT.............................................................. 22 1 1 15.00 15 14 0 1 0
..................................................................................................................TGACTAGACCGAACACTTGTGC............................................................... 22 1 1 14.00 14 14 0 0 0
..................................................................................................................TGGCTAGACCGAACACTCGTGC............................................................... 22 1 1 14.00 14 12 2 0 0
..................................................................................................................TGACTAGACCGAACACGCGTGCT.............................................................. 23 1 1 13.00 13 12 0 1 0
..................................................................................................................TGACTAGACCGAACATTCGTGCTT............................................................. 24 2 1 13.00 13 13 0 0 0
..................................................................................................................TGACTAGACCGAACACTCGTTC............................................................... 22 1 1 12.00 12 10 0 2 0
..................................................................................................................TGACTAGACCGAACTCTCGTGC............................................................... 22 1 1 12.00 12 12 0 0 0
..................................................................................................................TGACTAGACCGAACACTCATGC............................................................... 22 1 1 12.00 12 12 0 0 0
....................................................................................TTTTCCAATAAAGGTTTCGATCAAG.......................................................................................... 25 0 1 12.00 12 12 0 0 0
..................................................................................................................TGACTAGACCGAACACTCCTGC............................................................... 22 1 1 12.00 12 12 0 0 0
..................................................................................................................TGACTAGACCGAACCCCCGTGCT.............................................................. 23 2 1 11.00 11 11 0 0 0
..................................................................................................................TGACTAGACCGAACACTCGTCC............................................................... 22 1 1 11.00 11 11 0 0 0
..................................................................................................................TGACTAGACCAAACACTCGTGC............................................................... 22 1 1 11.00 11 11 0 0 0
..................................................................................................................TGACCTGACCGAACACTCGTGCT.............................................................. 23 2 1 11.00 11 10 1 0 0
..................................................................................................................TATCTAGACCGAACACTCGTGCT.............................................................. 23 2 1 10.00 10 10 0 0 0
..................................................................................................................TGACTAGACCGAACAATCGTGC............................................................... 22 1 1 10.00 10 10 0 0 0
..................................................................................................................TGACTAGACCGAACACCCGCGCT.............................................................. 23 2 1 10.00 10 10 0 0 0
..................................................................................................................TGACTAGACCGGACACTCGTGC............................................................... 22 1 1 9.00 9 9 0 0 0
..................................................................................................................TGACTAGACCGAACCCTCGCGCT.............................................................. 23 2 1 9.00 9 9 0 0 0
..................................................................................................................TGACTGGACCGAACACTCGTGC............................................................... 22 1 1 9.00 9 8 0 1 0
..................................................................................................................TGACTAGACCGAACGCTCGTGC............................................................... 22 1 1 9.00 9 9 0 0 0
................................................................................................................AGTGACTAGACCGAACACTCGT................................................................. 22 0 1 9.00 9 9 0 0 0
..................................................................................................................TGACCAGACCGAACACTCGTGC............................................................... 22 1 1 9.00 9 9 0 0 0
............................................................ATGGCGAATGTCGGTATGGTC...................................................................................................................... 21 0 1 9.00 9 8 1 0 0
..................................................................................................................TGACTAGACCGACCCCTCGTGCT.............................................................. 23 2 1 9.00 9 8 1 0 0
..................................................................................................................CGACTAGACCGAACACTCGTGC............................................................... 22 1 1 9.00 9 9 0 0 0
..................................................................................................................TGACTAGACCGAACACTCGTGCTG............................................................. 24 1 1 9.00 9 8 0 1 0
..................................................................................................................TGACTAGACCGAACACTCGGGC............................................................... 22 1 1 8.00 8 8 0 0 0
..................................................................................................................TGACTAGACCGAACACTCGCGC............................................................... 22 1 1 8.00 8 8 0 0 0
..................................................................................................................TGACTTGACCGAACACTCGTGC............................................................... 22 1 1 8.00 8 7 1 0 0
..................................................................................................................TGACTAGAAAGAACACTCGTGCT.............................................................. 23 2 1 7.00 7 7 0 0 0
..................................................................................................................TGACTAGACCCAACACTCGTGC............................................................... 22 1 1 7.00 7 7 0 0 0
..................................................................................................................TGACTAGACAGAACACTCGTGC............................................................... 22 1 1 7.00 7 7 0 0 0
...................................................................................................................GACTAGACCGAACACTCGTGC............................................................... 21 0 1 7.00 7 5 0 2 0
................................................................................................................AATGACTAGACCGAACACTCGTGCT.............................................................. 25 1 1 7.00 7 7 0 0 0
..................................................................................................................TGACTAGATCGAACACTCGTGCTT............................................................. 24 2 1 7.00 7 7 0 0 0
..................................................................................................................TGACTAGACCGAAAAATCGTGCT.............................................................. 23 2 1 7.00 7 7 0 0 0
..................................................................................................................TGACTAGACCGAAAACTCGTGC............................................................... 22 1 1 7.00 7 7 0 0 0
..................................................................................................................TGACTAGACCGAACACTTGTGCTT............................................................. 24 2 1 7.00 7 7 0 0 0
..................................................................................................................TGACTAGACCGCACACTCGTGC............................................................... 22 1 1 6.00 6 6 0 0 0
..................................................................................................................TGACTAGATCGAACATTCGTGCT.............................................................. 23 2 1 6.00 6 5 1 0 0
..................................................................................................................TGACTAGACCGAATACTCGTGCTT............................................................. 24 2 1 6.00 6 6 0 0 0
..................................................................................................................TGACTGGACCGAACACTTGTGCT.............................................................. 23 2 1 6.00 6 6 0 0 0
..................................................................................................................TGACTAGACCGAATATTCGTGCT.............................................................. 23 2 1 6.00 6 6 0 0 0
..................................................................................................................TCACTAGACCGAACACTCGTGC............................................................... 22 1 1 6.00 6 5 1 0 0
..................................................................................................................TGACTAGACAGAACACTAGTGCT.............................................................. 23 2 1 6.00 6 6 0 0 0
..................................................................................................................TGACTAGACCGAACACTCGTGTA.............................................................. 23 2 1 6.00 6 6 0 0 0
..................................................................................................................TGACTAGACCGAACACTCTCT................................................................ 21 3 1 6.00 6 4 1 1 0
..................................................................................................................TGACTAGACCGAACACTCGTGTC.............................................................. 23 2 1 5.00 5 5 0 0 0
..................................................................................................................TGACTAGACTGAACACTCGTGCTT............................................................. 24 2 1 5.00 5 5 0 0 0
..................................................................................................................TGACTAGACCGAACACTCGTGTTT............................................................. 24 2 1 5.00 5 5 0 0 0
..................................................................................................................GGACTAGACCGAACACTCGTGC............................................................... 22 1 1 5.00 5 5 0 0 0
..................................................................................................................TTACTAGACCGAACACTCGTGC............................................................... 22 1 1 5.00 5 5 0 0 0
..................................................................................................................TGACTAGACCGAACACTCGTGCAA............................................................. 24 1 1 5.00 5 5 0 0 0
..................................................................................................................TGCCTAGACCGAACACTCGTGC............................................................... 22 1 1 5.00 5 5 0 0 0
..................................................................................................................TGACTAGACCGAACCCTCGTGCTT............................................................. 24 2 1 5.00 5 5 0 0 0
..................................................................................................................TGACTAGACTGAACACTCGTGCTA............................................................. 24 1 1 5.00 5 5 0 0 0
..................................................................................................................TGACTAGACCGAAACCTCGTGCT.............................................................. 23 2 1 5.00 5 5 0 0 0
..................................................................................................................TGACTAGACCGAACACTCGCTCT.............................................................. 23 2 1 5.00 5 5 0 0 0
..................................................................................................................TGACGAGACCGAACACTCGTGCT.............................................................. 23 1 1 5.00 5 5 0 0 0
..................................................................................................................TGACTAGACCGAACACCCTTGCT.............................................................. 23 2 1 5.00 5 5 0 0 0
..................................................................................................................TGACTAGACTGAACACTCGTG................................................................ 21 1 1 5.00 5 5 0 0 0
..................................................................................................................TGACTAGACCGACCACTCGCGCT.............................................................. 23 2 1 5.00 5 5 0 0 0
..................................................................................................................TGACTATACCGAACACTCGTGC............................................................... 22 1 1 5.00 5 5 0 0 0
..................................................................................................................TGACTAGCCCGAACACTCGTGC............................................................... 22 1 1 5.00 5 5 0 0 0
.................................................................................................................CTGACTAGACCGAACACTCGTGC............................................................... 23 1 1 5.00 5 5 0 0 0
...................................................................................................................TGCTAGACCGAACACTCGTGCT.............................................................. 22 2 1 4.00 4 4 0 0 0
..................................................................................................................TGACTAGACCGGACACTCGTGCTT............................................................. 24 2 1 4.00 4 4 0 0 0
..................................................................................................................TGACTAGACCGAACGCTCGTGCTT............................................................. 24 2 1 4.00 4 4 0 0 0
..................................................................................................................TGACTAGACCGAACCCTCTTGCT.............................................................. 23 2 1 4.00 4 4 0 0 0
..................................................................................................................TGACTAGACCGAACACTCGTGCTCT............................................................ 25 1 1 4.00 4 4 0 0 0
..................................................................................................................TGACTAGACCGAATACTTGTGCT.............................................................. 23 2 1 4.00 4 4 0 0 0
..................................................................................................................TGAATAGACCGAACACTCGTGC............................................................... 22 1 1 4.00 4 4 0 0 0
..................................................................................................................TGCCTAGACCGAACCCTCGTGCT.............................................................. 23 2 1 4.00 4 4 0 0 0
..................................................................................................................TGACTAGACCGAGCACTCGTGCTT............................................................. 24 2 1 4.00 4 4 0 0 0
..................................................................................................................TGACTAGACCGAACTCTCGTGTT.............................................................. 23 2 1 4.00 4 4 0 0 0
..................................................................................................................TCTCTAGACCGAACACTCGTGCT.............................................................. 23 2 1 4.00 4 4 0 0 0
..................................................................................................................TGACTAGACCGAGAACTCGTGCT.............................................................. 23 2 1 4.00 4 4 0 0 0
..................................................................................................................TGAGTAGACCGAACACTCGTGC............................................................... 22 1 1 4.00 4 4 0 0 0
..................................................................................................................TGATTAGACCGAACATTCGTGCT.............................................................. 23 2 1 4.00 4 4 0 0 0
..................................................................................................................TGACTAGACCGAACACTCGGCT............................................................... 22 3 1 4.00 4 4 0 0 0
..................................................................................................................TGACTAGACCAAATACTCGTGCT.............................................................. 23 2 1 4.00 4 4 0 0 0
..................................................................................................................TGACTAGACCGAACACCCCTGCT.............................................................. 23 2 1 4.00 4 4 0 0 0
..................................................................................................................TGACTAGACCGAACACTCGTGCCA............................................................. 24 1 1 4.00 4 4 0 0 0
..................................................................................................................TGACTAGACCGCACCCTCGTGCT.............................................................. 23 2 1 4.00 4 4 0 0 0
..................................................................................................................TGACTAGACCGAACTCTCGTGCTT............................................................. 24 2 1 4.00 4 4 0 0 0
..................................................................................................................TGACTAGACCGAACCCTCGTGCC.............................................................. 23 2 1 4.00 4 4 0 0 0
..................................................................................................................TGACTAGCCCGACCACTCGTGCT.............................................................. 23 2 1 4.00 4 4 0 0 0
..................................................................................................................TGATTAGACCGAACACTCGTGTT.............................................................. 23 2 1 4.00 4 4 0 0 0
..................................................................................................................TGACTAGACCGAACACTCGTAC............................................................... 22 1 1 4.00 4 4 0 0 0
..................................................................................................................TGACTAGAACGAACACTCGTGC............................................................... 22 1 1 4.00 4 4 0 0 0
..................................................................................................................TGAATAGACCGAACACTAGTGCT.............................................................. 23 2 1 4.00 4 3 0 1 0
..................................................................................................................TGACTAGACCGAACACTCGCCCT.............................................................. 23 2 1 4.00 4 4 0 0 0
..................................................................................................................TGACTAGGCCGAACACTCGTGCTT............................................................. 24 2 1 3.00 3 3 0 0 0
..................................................................................................................TGACTAGATCAAACACTCGTGCT.............................................................. 23 2 1 3.00 3 3 0 0 0
..................................................................................................................TGACTAGACCGAACCATCGTGCT.............................................................. 23 2 1 3.00 3 3 0 0 0
..................................................................................................................TGACTAGACCGGACCCTCGTGCT.............................................................. 23 2 1 3.00 3 3 0 0 0
..................................................................................................................TGACTAGACCGAACATTTGTGCT.............................................................. 23 2 1 3.00 3 3 0 0 0
..................................................................................................................TGACTAGACCGAACACTCGTT................................................................ 21 1 1 3.00 3 3 0 0 0
..................................................................................................................TGACTAGACCGAATACTCGTCCT.............................................................. 23 2 1 3.00 3 3 0 0 0
..................................................................................................................TGACTAGACCGGACACTCGTGCC.............................................................. 23 2 1 3.00 3 3 0 0 0
..................................................................................................................TAACTAGACCGAACACTCGTGC............................................................... 22 1 1 3.00 3 3 0 0 0
..................................................................................................................TGACTAGACCTAACACTCGTGC............................................................... 22 1 1 3.00 3 3 0 0 0
..................................................................................................................TGACTAGGCCGAATACTCGTGCT.............................................................. 23 2 1 3.00 3 3 0 0 0
..................................................................................................................TGACTACACCGAACACTCGTGC............................................................... 22 1 1 3.00 3 3 0 0 0
..................................................................................................................TGACTAGATCGAACACTCGTG................................................................ 21 1 1 3.00 3 3 0 0 0
..................................................................................................................TGACTAGACCGAACATTCGTGCTA............................................................. 24 1 1 3.00 3 3 0 0 0
..................................................................................................................TGACTAGACCGAATACTCGTGTT.............................................................. 23 2 1 3.00 3 3 0 0 0
..................................................................................................................TGACTAGACCGAACACTCGCCT............................................................... 22 3 1 3.00 3 3 0 0 0
..................................................................................................................TGACTAGACCGAACACTCATGCTT............................................................. 24 2 1 3.00 3 3 0 0 0
..................................................................................................................TGATTAGACCGAACACTCGTG................................................................ 21 1 1 3.00 3 3 0 0 0
..................................................................................................................TGACTAGACCGAACACTCGTAAT.............................................................. 23 2 1 3.00 3 3 0 0 0
.................................................................................................................ATGACTAGACCGAACACTCGTGCT.............................................................. 24 1 1 3.00 3 2 1 0 0
..................................................................................................................TGACTAGACCGAACACTCGTGCCT............................................................. 24 2 1 3.00 3 3 0 0 0
..................................................................................................................TGACTAGACCGAACACTCCTGCTT............................................................. 24 2 1 3.00 3 2 1 0 0
..................................................................................................................TGACTAGACCGAACACTCGTGCAT............................................................. 24 2 1 3.00 3 2 1 0 0
..................................................................................................................TGACTAGACCGAACACTCCCGCT.............................................................. 23 2 1 3.00 3 3 0 0 0
..................................................................................................................TGACCATACCGAACACTCGTGCT.............................................................. 23 2 1 3.00 3 3 0 0 0
..............................................................GGCGAATGTCGGTATGGTCT..................................................................................................................... 20 0 1 3.00 3 3 0 0 0
..................................................................................................................TGACTAGACCGAACACTAGTGAT.............................................................. 23 2 1 3.00 3 3 0 0 0
..................................................................................................................TGACTAGACTGAACACTTGTGCT.............................................................. 23 2 1 3.00 3 3 0 0 0
..................................................................................................................TGACTAGACCGAACACCCGTG................................................................ 21 1 1 3.00 3 3 0 0 0
..................................................................................................................TGACTAGACCGAACACTTGTGCTA............................................................. 24 1 1 3.00 3 3 0 0 0
..................................................................................................................TGACTAGACCGACCACCCGTGCT.............................................................. 23 2 1 3.00 3 3 0 0 0
..................................................................................................................TGACTGGACCGAACATTCGTGCT.............................................................. 23 2 1 3.00 3 3 0 0 0
..................................................................................................................TGACTGGACCGAATACTCGTGCT.............................................................. 23 2 1 3.00 3 3 0 0 0
..................................................................................................................TGACTAGACCGAAAACTCGTGCTT............................................................. 24 2 1 3.00 3 3 0 0 0
.....................................................................................................................TGATACCGAACACTCGTGCT.............................................................. 20 3 1 3.00 3 3 0 0 0
..................................................................................................................TGACTAGACCGAACACTCGTGCTAA............................................................ 25 1 1 3.00 3 3 0 0 0
..................................................................................................................TGACTAGACCGCCCACTCGTGCT.............................................................. 23 2 1 3.00 3 3 0 0 0
..................................................................................................................TGACTAGACCGAACACACGTGC............................................................... 22 1 1 3.00 3 3 0 0 0
..................................................................................................................TAACTAGATCGAACACTCGTGCT.............................................................. 23 2 1 3.00 3 3 0 0 0
..................................................................................................................TGACTAGACCGAACACTCGTCCTT............................................................. 24 2 1 3.00 3 3 0 0 0
..................................................................................................................TGACAAGACCGAACACTCGTACT.............................................................. 23 2 1 3.00 3 0 3 0 0
................................................................................................................AGTGACTAGACCGAACACTCGTG................................................................ 23 0 1 3.00 3 3 0 0 0
..................................................................................................................TGACTAGACCGAAAACTAGTGCT.............................................................. 23 2 1 3.00 3 3 0 0 0
..................................................................................................................TGACTAGCCCGAACCCTCGTGCT.............................................................. 23 2 1 3.00 3 3 0 0 0
..................................................................................................................TGACTAGACCGAACATTCGTGT............................................................... 22 2 1 3.00 3 3 0 0 0
..................................................................................................................TGACTAGACCGAACATTCGTG................................................................ 21 1 1 3.00 3 3 0 0 0
..................................................................................................................TGTCTAGACCGAACACTCGTGC............................................................... 22 1 1 3.00 3 3 0 0 0
..................................................................................................................TGACCAGACCGAACACTCGTGCTT............................................................. 24 2 1 3.00 3 3 0 0 0
..................................................................................................................TGACTAGACTGAACACTCGCGCT.............................................................. 23 2 1 2.00 2 2 0 0 0
..................................................................................................................TGACTAGACCGAACACTGCT................................................................. 20 2 1 2.00 2 2 0 0 0
..................................................................................................................TGACTAGTCCGAACACTCGTGC............................................................... 22 1 1 2.00 2 2 0 0 0
..................................................................................................................TGACTAGACCGAACACTCCTG................................................................ 21 1 1 2.00 2 2 0 0 0
..................................................................................................................TGAATAGACCGAACACTCGTG................................................................ 21 1 1 2.00 2 2 0 0 0
....................................................................................TTTTCCAATAAAGGTTTCGATCAAGCGA....................................................................................... 28 0 1 2.00 2 2 0 0 0
....................................................................................TTTTCCAATAAAGGTTTCGATCA............................................................................................ 23 0 1 2.00 2 2 0 0 0
..................................................................................................................TGACTAGACCGAACCCTCCTGCT.............................................................. 23 2 1 2.00 2 2 0 0 0
..................................................................................................................TGACTATTCCGAACACTCGTGCT.............................................................. 23 2 1 2.00 2 2 0 0 0
..................................................................................................................AGACTAGACCGAACACTCGTGC............................................................... 22 1 1 2.00 2 2 0 0 0
..................................................................................................................TGACTCGACCGACCACTCGTGCT.............................................................. 23 2 1 2.00 2 2 0 0 0
..................................................................................................................TGATTAGACCGAACACTTGTGCT.............................................................. 23 2 1 2.00 2 2 0 0 0
..................................................................................................................TGACTAGACCGAACACTTGTG................................................................ 21 1 1 2.00 2 2 0 0 0
.....................................................................................................................TGACACCGAACACTCGTGCT.............................................................. 20 3 4 2.00 8 8 0 0 0
....................................................................................................................ACTAGACCGAACACTCGTGCTT............................................................. 22 1 1 2.00 2 2 0 0 0
..................................................................................................................TGACTAGATCGAACAATCGTGCT.............................................................. 23 2 1 2.00 2 2 0 0 0
..................................................................................................................TGACTAGACCGAACACTCGGGCC.............................................................. 23 2 1 2.00 2 2 0 0 0
..................................................................................................................TGGCTAGACCGAACACTCGTGCTT............................................................. 24 2 1 2.00 2 2 0 0 0
....................................................................................................................TCTAGACCGAACACTCGTGCT.............................................................. 21 1 1 2.00 2 2 0 0 0
..................................................................................................................TGACTAGACCGAACACTTGTGCC.............................................................. 23 2 1 2.00 2 2 0 0 0
...................................................................................................................GACTAGACTGAACACTCGTGCT.............................................................. 22 1 1 2.00 2 1 0 1 0
..................................................................................................................TGACTAGATCGAACACTCCTGCT.............................................................. 23 2 1 2.00 2 2 0 0 0
..................................................................................................................TGACTAGATCGAACACTCGTTCT.............................................................. 23 2 1 2.00 2 2 0 0 0
..................................................................................................................TGACTAGACCGCACACTCGCGC............................................................... 22 2 1 2.00 2 2 0 0 0
..................................................................................................................TGCCTAGACCGAACACCCGCGCT.............................................................. 23 3 1 2.00 2 2 0 0 0
..................................................................................................................TGACTAGAACGAACACTCGGGCT.............................................................. 23 2 1 2.00 2 1 0 1 0
..................................................................................................................TGACTAGACCGAACACTCGCGCC.............................................................. 23 2 1 2.00 2 2 0 0 0
...................................................................................................................TCCTAGACCGAACACTCGTGCT.............................................................. 22 2 1 2.00 2 2 0 0 0
..................................................................................................................TGACTAGACCCAACACTCGTGCTT............................................................. 24 2 1 2.00 2 2 0 0 0
..................................................................................................................TGACTAGACCGAACACCCGCGC............................................................... 22 2 1 2.00 2 2 0 0 0
..................................................................................................................TGACTAGACCGAACACTAATGCT.............................................................. 23 2 1 2.00 2 1 1 0 0
..................................................................................................................TTACTAGACCGAACACTCGCGCT.............................................................. 23 2 1 2.00 2 2 0 0 0
..................................................................................................................TGACTCGACCGAACCCTCGTGCT.............................................................. 23 2 1 2.00 2 2 0 0 0
..................................................................................................................TGACTAGACCGCACGCTCGTGCT.............................................................. 23 2 1 2.00 2 2 0 0 0
..................................................................................................................TGACTAGACAGAACACTCGCGCT.............................................................. 23 2 1 2.00 2 2 0 0 0
..................................................................................................................TAACTAGACCCAACACTCGTGCT.............................................................. 23 2 1 2.00 2 2 0 0 0
.................................................................................................................CTGACTAGACCGAACACTCGTGTT.............................................................. 24 2 1 2.00 2 2 0 0 0
..................................................................................................................TGACTAGACCGGACACTCGTG................................................................ 21 1 1 2.00 2 2 0 0 0
..................................................................................................................TGACTAGACCGAACCCTAGTGCT.............................................................. 23 2 1 2.00 2 2 0 0 0
..................................................................................................................TGCCTAGCCCGAACACTCGTGCT.............................................................. 23 2 1 2.00 2 2 0 0 0
..................................................................................................................TGACTAGACCGAACATTCGTGTT.............................................................. 23 2 1 2.00 2 2 0 0 0
..................................................................................................................TGACTGGACCGAGCACTCGTGCT.............................................................. 23 2 1 2.00 2 2 0 0 0
..................................................................................................................TGACTAGACCGAACAATTGTGCT.............................................................. 23 2 1 2.00 2 2 0 0 0
..................................................................................................................TGATTAGACTGAACACTCGTGCT.............................................................. 23 2 1 2.00 2 2 0 0 0
.................................................................................................................CTGACTAGACCGAACACTCGTGCTT............................................................. 25 2 1 2.00 2 2 0 0 0
..................................................................................................................TGACTAGACCGAACCCTCGTGTT.............................................................. 23 2 1 2.00 2 2 0 0 0
..................................................................................................................TGCCTAGACCGACCACTCGTGCT.............................................................. 23 2 1 2.00 2 2 0 0 0
..................................................................................................................TGACTAGACCGGACACTTGTGCT.............................................................. 23 2 1 2.00 2 2 0 0 0
..................................................................................................................TGATTAGACCCAACACTCGTGCT.............................................................. 23 2 1 2.00 2 2 0 0 0
..................................................................................................................TGACTATACCGAACACTCGTGCTT............................................................. 24 2 1 2.00 2 2 0 0 0
...................................................................................................................GACTAGACCGAACACTCGTGCTT............................................................. 23 1 1 2.00 2 2 0 0 0
..................................................................................................................TGGCTAGACCGAACACTCGTCCT.............................................................. 23 2 1 2.00 2 2 0 0 0
..................................................................................................................TGACCAGACCGAACACCCGTGCT.............................................................. 23 2 1 2.00 2 2 0 0 0
..................................................................................................................TGACTAGACCGAGCACTCGTG................................................................ 21 1 1 2.00 2 2 0 0 0
..................................................................................................................TGACTAGACCGATCACTCGTGCTT............................................................. 24 2 1 2.00 2 2 0 0 0
..................................................................................................................TGACTAGACCGAACACTCTTTCT.............................................................. 23 2 1 2.00 2 1 0 1 0
..................................................................................................................TGACTAGGCCGAACGCTCGTGCT.............................................................. 23 2 1 2.00 2 2 0 0 0
..................................................................................................................TGACTAGACCGAACACCCGTGCTT............................................................. 24 2 1 2.00 2 2 0 0 0

Anti-sense strand reads

GTTTAGTTGTTAGTTTTTTAGTTCTCATTCAATATAACCCGTGAGGTCAAAATTTTAACTTACCGCTTACAGCCATACCAGAGAAAAAGGTTATTTCCAAAGCTAGTTCGCTTCACTGATCTGGCTTGTGAGCACGATATTAAAATTTTATAAGTTGTACGAGTCACTTCAACGTTCACTTTGAAGTTTATAAGACACC

***********************************************((((((((((((....((((.(((((((.(((((.((((..((......))............)))).))))).)))).))).))))....))))))))))))..*********************************************** 		Read size # Mismatch Hit Count Total Norm Total M054

female body

 V113

male body
.......................................................................................................................TCTGGCTTGTGTGCCCGTTA............................................................ 20 3 7 0.14 1 1 0
......................................CCGTGAGGTGAAAGTTTTG.............................................................................................................................................. 19 3 20 0.05 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droSec2 scaffold_1:13063607-13063805 - dse-mir-286 Known_mirbase CAAA-------TCAA-CA-A------TCAAAAAATCA----------------------AGAGTAAGTT---------------------ATATT-GGGCACTCCAG---------------------------------TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCCA-ATAAA-----------GGTT----TCGATCAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCTCA--------G------TGAA-GTTG-CAAG----TGA-----------------AA-C------------------------------TT--------CAAATA-----------TTCT-----------GTGG
droSim2 2r:16196149-16196348 - dsi-mir-286 Known_mirbase CAAA-------TCAA-CA-A------TCCAAAAAGCA----------------------AGAGTAAGTG---------------------ATATT-GGGCACTCCAG---------------------------------TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCCAAAGAAA-----------GGTT----TCGATCAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCTCA--------G------TGAA-GTTG-CAAG----TGA-----------------AA-C------------------------------TT--------CAAATA-----------TTCT-----------GTGG
dm3 chr2R:15548878-15549078 - dme-mir-286 Known_mirbase CAAA-------TCAA-TT---AAA--TCAAAAAATCA----------------------AGAGTAAGTG---------------------ATATT-GGGCACTCCAG---------------------------------TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCAA-AGAAA-----------GGTT----TCGATTAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCTCA--------G------TAAA-GTTG-CGAG----TGA-----------------AAA-------------------------------TT--------AAAATA-----------TTAT-----------GGAG
droEre2 scaffold_4845:9749129-9749322 - der-mir-286 Known_mirbase CAAA-------TCAA-CA-ACAA----------ATGC----------------------AGAGTAAGTG---------------------TTA-T-AGGCACTGCAG---------------------------------TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCAA-A---GAA---------GGTT----TCGATCGA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCACA-CT-----G------TGAA-GTTG-CGAG----TGA-----------------AAA-------------------------------CA-----A----AAGA-----------TACT-----------GTAG
droYak3 2R:13623711-13623910 + dya-mir-286 Known_mirbase CAAA-------TCAA-CA-GTAA---TGCAAAAGAGA----------------------AGAGTAAGTG---------------------TTA-T-AGGCACTCCAG---------------------------------TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCAA-A---AGA---------GGTT----TCGATCAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCTCA--------G------TGAA-GTTG-CAAG----TGA-----------------AAT-------------------------------T------AATCAG--A-----------TACT-----------GGGG
droEug1 scf7180000409474:2396822-2396991 + TAAA-------C----------------------TGA----------------------AAAGTAAGTG---------------------ATAAT-TGGCAATCCAG---------------------------------TTTTAAAATTGAATGGCGAATGTCGGTATGGTCGCTTTTTCAA-A---C-----------G------------------------ACTAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATAATCAACAAGCTAA--------G------TGAAAGTTA-AAAA----GCA-----------------AAA-------------------------------AT-----A----AAGA-----------T-CT-----------AAAA
droBia1 scf7180000302143:3059780-3059968 - AAAC-------TGAA-AA-ATAC-G-TG-------CC----------------------AAAGTAAGTG---------------------AGAA---GGGCCTCCAG---------------------------------TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCAA-A---C-----------GGTG----ACGATCAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATACTCAACAAGCGAA--------G------TGAA-GTTA-AAGG----TGC-----------------AAG-------------------------------T--------------------------------GGGCCATCAAACT
droTak1 scf7180000415384:84002-84199 + CAAA-------GAAA-TA-A------TC-------TC----------------------AAAGTAAGTG---------------------ATACC-AGGCTCTCCAG---------------------------------TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCAA-A---C-----------GATT----ACCATCAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCTTA--------G------TGAA-GTTA-A-AG----TTA-----------------AAG-------------------------------TT-----AAT----GT-----------GAATGTAGGCAATCTAACT
droEle1 scf7180000491201:2013953-2014143 - CCAT-------ACAA-AG---CCAA-TA-------CA----------------------AAAGTAAGTG---------------------ATAAT-CGGTGCTCCAG--------------------------------TTTTTAAAATTGAATGGCGAATGTCGGTATGGTCGCTTTTTAAA-A---T-----------GGTT----TCGACCAA---------GCGTAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCAACAAGCCAA--------G------TGAT-GTTTTTTAG----TGA-----------------AAG----------------------------------------------------------------AGGCAATCCCCAA
droRho1 scf7180000780066:73611-73803 + CAAC-------CATA-TAAATACAA-TA-------CA----------------------AAAGTAAGTG---------------------ATAAT-TGGCACTCCAG---------------------------------TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTAAT-A---C-----------GGTT----CCGACCAA---------GCTAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAGTTTTCAACTTGCCTA--------G------TGAA-ATTA-TTAG----TGA-----------------AAA-------------------------------G--------------------------------AAGACATCCAAGA
droFic1 scf7180000454039:848011-848182 - CAAA-------CCAA-TA-A------TCCA--------------------------------ACAAGTG---------------------AACTTAAGGCTCATCAG---------------------------------TTTTAAAATTAAATGGCGATTGTCGGTATAGTCGCTTTTACAA-A---C-----------ATTT----CCTTTCAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACAGACAAG--------G------TGAA-GTTA-CCAG----TGA-----------------AAA-------------------------------A---------------------------------------------
droKik1 scf7180000302679:89323-89538 - CAACAGCAGCACCAAGAAAGTAAAGTTCCAAAAGTGA----------------------AAAGAAACAG---------------------CTAAT-T-----ACCAG---------------------------------TTTTAAAATTGAATGGCGATTGTCGGTATGGTCGCTTTTTGAA-A---CCA---------GGTT----CCGATCAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCATCAAGTTAGGGGATAAAG------TGCA-GTTG-TAA-------C-----------------AA-------------------------------GTTAATATATCCA---------------AA-C-----------AAGG
droAna3 scaffold_13266:9731315-9731519 + dan-mir-286 Known_mirbase AGAA-------TCAA-TT---C-----------ATCA---------------------AATTGTAAGTG---------------------ATTTT-TAGCATCAGAA---------------------------------TTTTAAAATTGAATGGCGATTGTCGGTATGGTCGCTTTTTCACAA-AAA----AATT---GGTT----ACCAACAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCATCAAGCTAA-------AG------TGA--CTTG-GAAATGTA--A-----------------AG-T------------------------------TT--------CAAATAATATAC-----CAAT-----------ATAA
droBip1 scf7180000396427:874292-874478 + AAC---------AAA-GA-A------TCCAGTCATCA----------------------AATGTAAGTG---------------------GTTAT-TAGCATCAGAA---------------------------------TTTTAGAATTGAATGGCGATTGTCGGTATGGTCGCTTTTTTCACAAAAG-----------GGTT----TCCATCAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCAACAAGCTAA-------AG------TG----TTT-------------------------------------------------------------------------CAAATAGTGT-------T-TC-----------TTAA
dp5 3:12677502-12677740 - dps-mir-286 Known_mirbase CAAG-------TGTA-CA-AGAA---T------------GGCGA------------TAAAGTGTGTGTG--------------TCGCAGA-------------------------------------AAAAGAAGACAAATTTTAAAATTAAATGGCGATTGTCGGTTTGGTCGCTTTTTACC-A---G-----------GGTT----CCGATCAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAGAATGTTCAACATGGCCA---ACC-AGTGAC----------G-AAAGTGAC---------AAAAGT-GAAA---AAAGTGACAAAGTTTGTGTACACTCCACGAGTTG---------------------ATACCTT-----------ATTG
droPer2 scaffold_2:8905926-8906164 + dpe-mir-286 Known_mirbase CAAG-------TGTA-CA-AGAA---T------------GGCGA------------TAAAGTGTGTGTG--------------TCGCAGA-------------------------------------AAAAGAAGACAAATTTTAAAATTAAATGGCGATTGTCGGTTTGGTCGCTTTTTACC-A---G-----------GGTT----CCGATCAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAGAATGTTCAACATGGCCA---ACC-AGTGAC----------G-GAAGTGAC---------AAAAGT-GAAA---AAAGTGACAAAGTGTGTGTACACTCCACGAGTTG---------------------ATACCTT-----------ATTG
droWil2 scf2_1100000004514:1651692-1651910 - dwi-mir-286 Known_mirbase AAGT-------TAGC-CA-A-------C-------CA-----------------------AACTTAGTGAGTG-----------------ACTAT---GCAATTGAA----------------------------ATTACTTTTAAAATTGAATGGCGATTGTCGGTATAGTCTCTTTTTCCA-A---AAA--TCTTGTTTGTTTTTGCCAATCTA------ATAAGAAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCAACAAGCAAC--A-----A------CCAA-CAAG-CTAGTGAG---------AAGAATT----AA-C------------------------------TT----TAACCA---------------AA-TG----------GCGG
droVir3 scaffold_12875:4112057-4112309 + dvi-mir-286 Known_mirbase CAGA-------TATT-CC-AGTG----------TTTC----------------------AGTGTGACAG------------TG-------TT--C-CAGTATTCCAGTGTTTCAATTCCAATATTCCA---------GTATTTTAAAATTAAATGGCGATTGTCGGTATGGTCGCTTTTTCAA-A---CAA---------TATA----CCATT-AT-----CTATATAAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCAACGTATATA-------AAAAGC----------A-CAAGTTCT---------CGATTT-GATA---ACCGTCGCAATATATATATATA---TATATA---------------------TCTATATCAT-----------ATAG
droMoj3 scaffold_6496:20936711-20936954 - dmo-mir-286 Known_mirbase CAGT-------GTT---------------------TC----------------------ACTATCAGTGTTTCACTTTCAGTGTTTCATT------------TCCAG--------------TGTTCGAAAATTATA-AAATTTTAAAATTAAATGGCGATTGTCGGTATGGTCTCTTTTTCAA-C---ATA---------TA--------CACCAAACATTCTATATAAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCAACAATTTCAATT-----A------TAAA-ATTT-CTAG----TGCATGGTTCAAACT-TAAA---AAGAAAACAAAA----------------------------------------TCTATATCGT-----------ATAG
droGri2 scaffold_15112:2108756-2109002 - dgr-mir-286-1 Known_mirbase TAAA-------GAAA-AG---AA---TATA-----AAATGGTGAATTTTGCAGTGT----TTTGCAGTGTTTT---GTGTGTGTTGCAGT-CAA---ACCCAGCCAG-------------------------------TATTTTAAAATTAAATGGCGATTGTCGGTATGGTCGCTTTTGAA--C---CTAAACTCT---ATAT----ACAATA--------TATATAAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCAACATAGGCA----TC-AGTTTTGGTTAA-ATGA-AAAA----TGA-----------------TA-A------------------------------AT--------CGA--------TCTATATTTT-----------ATAG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSec2
CAAA-------TCAA-CA-A------TCAAAAAATCA----------------------AGAGTAAGTT---------------------ATATT-GGGCACTCCAG---------------------------------TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCCA-ATAAA-----------GGTT----TCGATCAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCTCA--------G------TGAA-GTTG-CAAG----TGA-----------------AA-C------------------------------TT--------CAAATA-----------TTCT-----------GTGGSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCT................................................................................................................................................................231271567.002715671362212640486136
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGC.................................................................................................................................................................22110716.001071666310498149
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTT...............................................................................................................................................................2412288.00228873225523
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTG..................................................................................................................................................................2111158.001158102112818
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCC................................................................................................................................................................231482.004824046612
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGT.................................................................................................................................................................221440.00440114326
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTA...............................................................................................................................................................241333.00333603189
........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCT................................................................................................................................................................221204.002041030992
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTAT..............................................................................................................................................................251192.00192201873
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGT...................................................................................................................................................................201140.00140221333
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCA................................................................................................................................................................23188.008841785
.........................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCT................................................................................................................................................................21173.007340681
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCG................................................................................................................................................................23152.005210510
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTC...............................................................................................................................................................24148.004800471
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTCT.................................................................................................................................................................22145.004540392
................................................................................................................................................................................TTTTCCA-ATAAA-----------GGTT----TCGATCAA---------GCG..........................................................................................................................................................................................27134.003420311
..........................................................................................................................................................GGCGAATGTCGGTATGGTCTCT..............................................................................................................................................................................................................................................22132.003250270
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGA.................................................................................................................................................................22122.002202182
............................................................................................................................................................................................................................................AGACCGAACACTCGTGCT................................................................................................................................................................18121.002100210
..........................................................................................................................................................................................................................................CTAGACCGAACACTCGTGCT................................................................................................................................................................20121.002110200
...........................................................................................................................................................................................................................................TAGACCGAACACTCGTGCT................................................................................................................................................................19120.002010190
................................................................................................................................................................................TTTTCCA-ATAAA-----------GGTT----TCGATCAA---------GC...........................................................................................................................................................................................26118.001800180
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTC.....................................................................................................................................................................18116.001630130
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCG....................................................................................................................................................................19116.001610150
................................................................................................................................................................................TTTTCCA-ATAAA-----------GGTT----TCGATCAA---------G............................................................................................................................................................................................25112.001200120
.....................................................................................................................................................................................................................................AGTGACTAGACCGAACACTCGT...................................................................................................................................................................2219.0090090
........................................................................................................................................................ATGGCGAATGTCGGTATGGTC.................................................................................................................................................................................................................................................2119.0090081
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTG...............................................................................................................................................................2419.0091080
........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGC.................................................................................................................................................................2117.0072050
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTA................................................................................................................................................................2316.0060060
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCTCT..................................................................................................................................................................2116.0061041
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTC................................................................................................................................................................2315.0050050
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGGCT.................................................................................................................................................................2214.0040040
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTT..................................................................................................................................................................2113.0030030
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGCCT.................................................................................................................................................................2213.0030030
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCCT...............................................................................................................................................................2413.0030030
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCAT...............................................................................................................................................................2413.0030021
..........................................................................................................................................................GGCGAATGTCGGTATGGTCT................................................................................................................................................................................................................................................2013.0030030
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTAA..............................................................................................................................................................2513.0030030
.....................................................................................................................................................................................................................................AGTGACTAGACCGAACACTCGTG..................................................................................................................................................................2313.0030030
................................................................................................................................................................................TTTTCCA-ATAAA-----------GGTT----TCGATCAA---------GCGA.........................................................................................................................................................................................2812.0020020
................................................................................................................................................................................TTTTCCA-ATAAA-----------GGTT----TCGATCA.......................................................................................................................................................................................................2312.0020020
.........................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCTT...............................................................................................................................................................2212.0020020
........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCTT...............................................................................................................................................................2312.0020020
droSim2
CAAA-------TCAA-CA-A------TCCAAAAAGCA----------------------AGAGTAAGTG---------------------ATATT-GGGCACTCCAG---------------------------------TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCCAAAGAAA-----------GGTT----TCGATCAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCTCA--------G------TGAA-GTTG-CAAG----TGA-----------------AA-C------------------------------TT--------CAAATA-----------TTCT-----------GTGGSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCT................................................................................................................................................................2311382795.001382795251910879609732122304085121213235111035311169942314100
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCC................................................................................................................................................................231113758.001137583351081128210003113785026800000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGC.................................................................................................................................................................22169704.00697042838646695171922272860658882781634000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCG................................................................................................................................................................23154047.00540478652537391002160016000000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCG....................................................................................................................................................................1914915.0049151994845135008191500000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTT...............................................................................................................................................................2414724.0047241210225250015101138742053901000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTG..................................................................................................................................................................2114456.004456281325101132410844582143900000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGG.................................................................................................................................................................2213354.00335495333800000000200000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTA...............................................................................................................................................................2412731.00273141978000211386276119000000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGAC................................................................................................................................................................2311653.00165341164700000000100000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTAT..............................................................................................................................................................2511566.00156611701006065875207700000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGT.................................................................................................................................................................2211150.0011508278700000119033102000
..........................................................................................................................................................GGCGAATGTCGGTATGGTCTCT..............................................................................................................................................................................................................................................221976.009761147610014324822201000000
........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCT................................................................................................................................................................221722.0072211557150010343407900000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGT...................................................................................................................................................................201603.00603813100315511057817501000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCA................................................................................................................................................................231478.004781132200063635902300000
................................................................................................................................................................................TTTTCCAAAGAAA-----------GGTT----TCGATCA.......................................................................................................................................................................................................241299.002990029010000340100000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTC.....................................................................................................................................................................181266.00266002070325008230000000
................................................................................................................................................................................TTTTCCAAAGAAA-----------GGTT----TCGATCAA---------G............................................................................................................................................................................................261171.001710016000000370100000
.........................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCT................................................................................................................................................................211170.001700010100000251403000000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTC...............................................................................................................................................................241137.00137017700010191502400000
..........................................................................................................................................................................................................................................CTAGACCGAACACTCGTGCT................................................................................................................................................................201124.00124007300000201201900000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGA.................................................................................................................................................................221121.001218285000116501300000
...........................................................................................................................................................................................................................................TAGACCGAACACTCGTGCT................................................................................................................................................................19196.0096002500010191603500000
............................................................................................................................................................................................................................................AGACCGAACACTCGTGCT................................................................................................................................................................18181.008110370000019143700000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTG...............................................................................................................................................................24174.0074006400000350200000
........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCC................................................................................................................................................................22167.0067006700000000000000
..........................................................................................................................................................GGCGAATGTCGGTATGGTCTC...............................................................................................................................................................................................................................................21159.00590029001201590300000
..........................................................................................................................................................GGCGAATGTCGGTATGGTCTCC..............................................................................................................................................................................................................................................22158.0058005800000000000000
.....................................................................................................................................................................................................................................AGTGACTAGACCGAACACTCGTG..................................................................................................................................................................23149.004900130000021150000000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTCT.................................................................................................................................................................22145.00451060000024140000000
......................................................................................................................................................................................................................................GTGACTAGACCGAACACTCGTGCT................................................................................................................................................................24145.0045004100000200200000
................................................................................................................................................................................TTTTCCAAAGAAA-----------GGTT----TCGATCAA---------GCG..........................................................................................................................................................................................28137.0037003000010510000000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTG................................................................................................................................................................23136.00360020000000001600000
................................................................................................................................................................................TTTTCCAAAGAAA-----------GGTT----TCGAT.........................................................................................................................................................................................................22136.0036003300000110100000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGG...................................................................................................................................................................20136.0036003600000000000000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCCT...............................................................................................................................................................24135.0035003000000110300000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACT......................................................................................................................................................................17134.0034000000108250000000
........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGC.................................................................................................................................................................21133.0033002400000410400000
........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCG................................................................................................................................................................22132.0032003200000000000000
........................................................................................................................................................ATGGCGAATGTCGGTATGGTC.................................................................................................................................................................................................................................................21129.00290015000000101300000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTC................................................................................................................................................................23127.0027002400000000300000
..............................................................................................................................................................................................................................................ACCGAACACTCGTGCT................................................................................................................................................................16127.0027000000001980000000
.......................................................................................................................................................................................................................................TGACTAGACCGAACAC.......................................................................................................................................................................16125.00250000000010150000000
..........................................................................................................................................................GGCGAATGTCGGTATGGTCT................................................................................................................................................................................................................................................20115.001500900010220100000
.....................................................................................................................................................................................................................................AGTGACTAGACCGAACACTCGT...................................................................................................................................................................22115.0015001000000000500000
dm3
CAAA-------TCAA-TT---AAA--TCAAAAAATCA----------------------AGAGTAAGTG---------------------ATATT-GGGCACTCCAG---------------------------------TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCAA-AGAAA-----------GGTT----TCGATTAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCTCA--------G------TAAA-GTTG-CGAG----TGA-----------------AAA-------------------------------TT--------AAAATA-----------TTAT-----------GGAGSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCT................................................................................................................................................................231525385.0052538500001844492491179644580310000000150094021181100107123122121319641123116271130002830000000000000000005431528573130591871321553705829104251310212210513823417245933700554163110617284194130431747304473416410201311974721110000025110098522175144797567043979747361422316330970102650415035101026004113118241811147801225711590005072102102163170000003013724244844828281448487482623146306000009401128001087726728710417412145254925398772141225101851011117538195281574923038250128161353514111720659313929815573919202151438155920102739133268554211331714564181459243861062591524831801441731980
..........................................................................................................................................................GGCGAATGTCGGTATGGTCTCT..............................................................................................................................................................................................................................................22145803.00458030000402895253516000000000000000000000000300000000000000000100000000000000000000000101001034815757615729812144401600421422010331029142114211860260073055191024000000000000100000000000821058116736470100010000000000000100020200000100000000000000000000000805000200000000000010011170110010000073640000000000000000010001000000210000000402000000110132524201400000000000120011000100000001120200000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGC.................................................................................................................................................................22124186.00241860000011391136811100000000001001000000005101021032032000072100080000000000000000000000004322323887804500116400111249610618631623104540229093013000212000000000000100167215993818229020524100041644630005000901600003202001200051012120300010000801113000000100651166972611652730641412190000101512350132129120205601381851042161310029210313420221015011525132512316541150020200006031210912053023942225444886747254531310
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTG..................................................................................................................................................................2118414.0084140000001314120000000000000000000000003493000000010111000110000010000000000000000000000003935381311100001202100311820001040006751016001000000010000000000000270331549243927000140000000000000101000001001000100001021000000000000000500000000000101116100421220002000024833800100001002000031601000110200130202701211028010413111162952010300113202001110100702014013112911102143130
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTT...............................................................................................................................................................2415866.0058660000003201770000000000000000000000000000000000400100000000000000000000000000000000034318415528240000210001013302600301411000149342340100001010001000000000001263267255063040001000000000000000000010010010100000010120010000000000000100000000000011112056020300200001052070010001010400000110000000101021021221116132100030102035247004000010010031004042112300001259150112270
..........................................................................................................................................................GGCGAATGTCGGTATGGTCT................................................................................................................................................................................................................................................2015774.0057740000000410000000000000000000000000540200000000000000000000000000000000000000000000006012270000000010000000000001000400000000000000000000000000017191464000000040000000000000000000000000000000000000000000000000000000000000000000000000000000003400000000000000000000000000000000000000000000000002303200000000100000000000000000000000000000000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGT...................................................................................................................................................................2014804.004804000000000000000000000000000000000025930000001003000000000000000000000000000000000000517200000100000010000000000000120000000000000000000000000010157119889250000000000000040610000000000000000000020100000000000000002100200000000030500070300000000809200100100000001021000000000000600026010103010010021937465501011000010000018219130124034160721141421150
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCC................................................................................................................................................................2313154.00315400000015513810000000000000000000000000000000000000000000000000000000000000000000000002491499814136003002000001001700009170008112043000000001000000000000000961593422562200000000000000000000000000000000000000000200000000000000000000000000000000001036110000000003568000000000020000250000000000000000201150300000000110517700000000000101000100000010000001040001020
..........................................................................................................................................................GGCGAATGTCGGTATGGTCTC...............................................................................................................................................................................................................................................2112028.00202800000069220000000000000000000000001000000010000000000000000000000000000000000000016027216720200000200000000000200273300028103000000000100000000000000013789732410000000000000000000000000000000000000000000000000000020000000000000010000000010200000000138000000000000000000000010000000000000100000000000111192400600001000000000000000000010000000000000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTA...............................................................................................................................................................2411874.0018740000006192100000000000000010000000000200000000000000000004000000000000000000000000152111487625000002002000000000008700059502700000000000000000000000057151359108181000020030000000000000000000000000000000000000000000000000000000000000000131317321620001100305200000000000000021000000000000101110415040000000103812000000000000000000010000010000000150001000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTAT..............................................................................................................................................................2511018.0010180000002102000000000000000000000000000000000000000000000000000000000000000000000000926825491600000000100000000000010003100400000000000000000000000014356519200000100000000000000000000000000000000000200000000000000002000000000000000403070023100010002419000000000000000000000000000000000000010000000000038433000020000000000000000000000000000120000000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCA................................................................................................................................................................231501.005010000101478517000000000000000000000000001000000000000000000000000000000000000000000003877108001000000000100100001400082032001000000000000000000000317423740000000000000010000000100000000000100000000000000000000000000000000000000000008011001000069000000000000000000000000000000002200001600000100073900000000000000000000000001000000000001000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCG....................................................................................................................................................................191419.0041900000000000000000000000000000000001650100000000000000000002000000000000000000000000500000000000010000100000020000410700000000000000000000000011715120300000000000000000000000000000000000000000000000000000000000000000030000001000300000000008220000000000000000100000000000000000020000000000000845410000000000000000100000000000100100000000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCG................................................................................................................................................................231390.00390000010299100000000000000000000000000000000000000000000000000000000000000000000000101212170000000000000000000054000261031000000000000000000000000926397840000000000000000000000000000000000100000020000000000000000000000000000000000000010000000036000000000010000010001000000000000000000000000000065200000000000000000000000000000000010000100
........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCT................................................................................................................................................................221359.003590000001420000000000000000000000000000000000000000000000000000000000000000000000003125162010000000000000000000000000170090010000000000000000000003818160000000000000000000000230000000100000000006000000000000000000000000000000000000210800000000470000000000000000200000000000000000000300000000000121900000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGT.................................................................................................................................................................221268.0026800000002340000000000000000000000000000000000000000000000000000000000000000000000074131300000010000011000000000000720000000000000000000000000011317304100000000000000000000010000000000010000000000000000000000000000000000000000000303000100001390000000000100001700001000000000000010000000000000741400000000000000000000000020000100800011100
................................................................................................................................................................................TTTTCAA-AGAAA-----------GGTT----TCGATTAA---------GCG..........................................................................................................................................................................................271195.0019500000000000000000000000000000000000000000000000000000000000000000000000000000000080500000000000000000000000000000000000000000000000000000000436010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000110000000000000000000000000000000000000000000000000163200000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTC...............................................................................................................................................................241188.00188000000020000000000000000000000000000000000000000000000000000000000000000000000000121183020000000000000000000001000100000000000000000000000000006824900000000000000000000000000000000000000000002000000000000000000000000000000010001010000000026000000000000000000000000000000000001000000010000043600000000000000000001000000000000000000000
.........................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCT................................................................................................................................................................211160.0016000000000100000000000000000000000000000000000000000000000000000000000000000000000090372000000000000200000000000021030000000000000000000000005491000000000000000000000000000000000000000000100000000000000000000000000000001000000300000000670000000000000000300000000000000002000000000000000701600000000000000000000000000000000020000000
...........................................................................................................................................................................................................................................TAGACCGAACACTCGTGCT................................................................................................................................................................191141.00141000000000000000000000000000000000000000000000000000000000000000000000000000000000130161000000000010012010000000000400000000000000000000000000031620800000000000000000000000000000100000000000000000000000000100000000000000000000000000000000055000000000000000000000000000000000000000000000000033100000000000000000000000000000000000000000
........................................................................................................................................................ATGGCGAATGTCGGTATGGTC.................................................................................................................................................................................................................................................211125.001250000000000000000000000000000000000000000000000000000000000000000000000000000000006032000000000000000000000000000000000000000000000000000000152840000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012000000000000000000000000000000000000000000000000080900000000000000000000000000000000020000000
..........................................................................................................................................................GGCGAATGTCGGTATGGTCTCC..............................................................................................................................................................................................................................................221123.00123000000461100000000000000000000000000000000000000000000000000000000000000000000000309032000000100000000000000140000002000000000000000000000000014600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000029000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................CTAGACCGAACACTCGTGCT................................................................................................................................................................201121.001210000000110000000000000000000000000200000000000000000000000000000000000000000000001128410000000000000010000000000400300000000000000000000000011591170000000000000000000000000000000000000000000000000000000000000000000000000000001000000000036000000000000000000000000000000000000000000000000026400000000000000000000000000000000000000000
..........................................................................................................................................................GGCGAATGTCGGTATGGTC.................................................................................................................................................................................................................................................191113.001130000000000000000000000000000000000240000000000000000000000000000000000000000000000300020000000000000000000000000000000000000000000000000000040157000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000019200000000000000000000000000000000000000000
............................................................................................................................................................................................................................................AGACCGAACACTCGTGCT................................................................................................................................................................18197.00970000000000000000000000000000000000000000000001000000000000000000000000000000000001034110000000000014110000000000010000000000000000000000000081025010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000032000000000000000000000000000000000200000000000000016200000000000000000000000000000000000000000
..........................................................................................................................................................GGCGAATGTCGGTATGGT..................................................................................................................................................................................................................................................18193.009300000000000000000000000000000000000000000000000000000000000000000000000000000000050001000000000000000000000000010000000000000000000000000001752000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000059100000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTATC.............................................................................................................................................................26190.009000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004346000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGA.................................................................................................................................................................22180.0080000000111117000000000000000000000000000000000000000000000000000000000000000000000000022000000000000000000000000001000000000000000000000000000213500000000000000000000000000000000000000000000000000000000000000000000000000000001010000000053000000000000000000000000000000000000000000000000021200000000000000000000010000000000000000000
..........................................................................................................................................................GGCGAATGTCGGTATGGTCTCTT.............................................................................................................................................................................................................................................23176.0076000000000000000000000000000000000000000000000000000000000000000000000000000000000118161160000000000000001000002000100100000000000000000000000005400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000009000000000000000000000000000000000000000000
.........................................................................................................................................................TGGCGAATGTCGGTATGGTCTCT..............................................................................................................................................................................................................................................23165.006500000001000000000000000000000000000000000000000000000000000000000000000000000000016001600000000000000000000800000006000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000023100000000000000000000000000000000000000000
..........................................................................................................................................................GGCGAATGTCGGTATGGTCTCA..............................................................................................................................................................................................................................................22157.005700000061011000000000000000000000000000000000000000000000000000000000000000000000001910020000000000000004000005000000000000000000000000000000002010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000
..........................................................................................................................................................GGCGAATGTCGGTATGGTCTCTA.............................................................................................................................................................................................................................................23156.005600000001000000000000000000000000000000000000000000000000000000000000000000000000075001100000000000000000000400000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000027000000000000000000000000000000000000000000
................................................................................................................................................................................TTTTCAA-AGAAA-----------GGTT----TCGATTAA---------G............................................................................................................................................................................................25155.00550000000000000000000000000000000000100000000000000000000000000000000000000000000002001000000000000000000000000000000000000000000000000000000223001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000035600000000000000000000000000000000000000000
...........................................................................................................................................................GCGAATGTCGGTATGGTCTCT..............................................................................................................................................................................................................................................21154.005400000002000000000000000000000000000000000000000000000000000000000000000000000000080101100000000000010000000040001006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTC.....................................................................................................................................................................18146.00460000000000000000000000000000000000000000000010000000000000000000000000000000000007010000000000000000000000000001004000000000000000020000000111001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000022000000000000000000000000000000000000000000000000091300000000000000000000000000000000000000000
............................................................................................................................................................CGAATGTCGGTATGGTCTCT..............................................................................................................................................................................................................................................20141.0041000000100000000000000000000000000020000000000000000000000000000000000000000000000620170000000000000000000014000100300000000000000000000000001300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009000000000000000000000000000000000000000000
................................................................................................................................................................................TTTTCAA-AGAAA-----------GGTT----TCGATTAA---------GCGA.........................................................................................................................................................................................28135.00350000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000075500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000017000000000000000000000000000000000000000000
.........................................................................................................................................................TGGCGAATGTCGGTATGGTCTC...............................................................................................................................................................................................................................................22135.00350000000000000000000000000000000000000000000000000000000000000000000000000000000001081000000000000010000000000000004000000000000000000000000001800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTC................................................................................................................................................................23134.00340000002000000000000000000000000000000000000000000000000000000000000000000000000002113000000100000000000000000000001000000000000000000000000102300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000014100000000000000000000000000000000100000000
..........................................................................................................................................................GGCGAATGTCGGTATGGTCTCG..............................................................................................................................................................................................................................................22134.003400000003000000000000000000000000000000000000000000000000000000000000000000000000010011200000000000000010000000000000100000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTG...............................................................................................................................................................24134.0034000000010000000000000000000000000020000000000000000000000000000000000000000000000901000000000000000000000000000000000000000000000000000000002400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005100000000000000000000000000000000000000000001000006200000000000000000000000000000000000000000
................................................................................................................................................................................TTTTCAA-AGAAA-----------GGTT----TCGATTAA---------GC...........................................................................................................................................................................................26132.00320000000000000000000000000000000000000000000000000010000000000000000000000000000000051000000000000000000000000000000000000000000000000000000039000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000012000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTAA..............................................................................................................................................................25129.0029000000000000000000000000000000000000000000000000000000000000000000000000000000000203100000000000000000000002000100000000000000000000000000001200100000000000000000000000000000000000000000000000000000000000000000000000001000904000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................................................................................................GAATGTCGGTATGGTCTCT..............................................................................................................................................................................................................................................19127.00270000000000000000000000000000000000100000000000000000000000000000000000000000000001000200000000000000000000000000000000000000000000000000000155000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................AGTGACTAGACCGAACACTCGTG..................................................................................................................................................................23127.0027000000030200000000000000000000000000000000000000000000000000000000000000000000000221700000000000000000000000000320000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000
..........................................................................................................................................................GGCGAATGTCGGTATGGTCTCTC.............................................................................................................................................................................................................................................23125.00250000000000000000000000000000000000000000000000000000000000000000000000000000000005080000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
droEre2
CAAA-------TCAA-CA-ACAA----------ATGC----------------------AGAGTAAGTG---------------------TTA-T-AGGCACTGCAG---------------------------------TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCAA-A---GAA---------GGTT----TCGATCGA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCACA-CT-----G------TGAA-GTTG-CGAG----TGA-----------------AAA-------------------------------CA-----A----AAGA-----------TACT-----------GTAGSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCT................................................................................................................................................................231107629.001076293537544691495304817
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCC................................................................................................................................................................23110737.001073719105590158010
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGC.................................................................................................................................................................2219280.0092801836142029420130
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTT...............................................................................................................................................................2411090.001090457390302130
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTG..................................................................................................................................................................211930.00930534500427000
........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCT................................................................................................................................................................221335.0033528225028000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGT.................................................................................................................................................................221287.002872750210000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGAC................................................................................................................................................................231157.00157015700000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCG................................................................................................................................................................231150.00150067083000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGT...................................................................................................................................................................201142.001421230116020
..........................................................................................................................................................GGCGAATGTCGGTATGGTCTCT..............................................................................................................................................................................................................................................22193.0093206409000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTA...............................................................................................................................................................24185.00851351021000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTC...............................................................................................................................................................24183.0083161021000
.........................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCT................................................................................................................................................................21154.0054926019000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGA.................................................................................................................................................................22137.0037126010000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCA................................................................................................................................................................23131.0031216011020
..........................................................................................................................................................GGCGAATGTCGGTATGGTCTCC..............................................................................................................................................................................................................................................22125.002502500000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCG....................................................................................................................................................................19124.002401806000
..........................................................................................................................................................................................................................................CTAGACCGAACACTCGTGCT................................................................................................................................................................20120.00207508000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTC................................................................................................................................................................23117.001701403000
...........................................................................................................................................................................................................................................TAGACCGAACACTCGTGCT................................................................................................................................................................19116.001621013000
........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGC.................................................................................................................................................................21114.00149401000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTAT..............................................................................................................................................................25112.00121209000
.........................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGC.................................................................................................................................................................20111.00113305000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTCT.................................................................................................................................................................2219.0093600000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTG...............................................................................................................................................................2419.0095202000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCCT...............................................................................................................................................................2417.0070304000
droYak3
CAAA-------TCAA-CA-GTAA---TGCAAAAGAGA----------------------AGAGTAAGTG---------------------TTA-T-AGGCACTCCAG---------------------------------TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCAA-A---AGA---------GGTT----TCGATCAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCTCA--------G------TGAA-GTTG-CAAG----TGA-----------------AAT-------------------------------T------AATCAG--A-----------TACT-----------GGGGSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCT................................................................................................................................................................2311113308.00111330841019110027701097537210740010
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCC................................................................................................................................................................231264917.002649177702646062340000000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGC.................................................................................................................................................................22156464.005646457125223441544300000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTT...............................................................................................................................................................24112894.001289441122915941300000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGAC................................................................................................................................................................2314780.00478010477630000000
..........................................................................................................................................................GGCGAATGTCGGTATGGTCTCT..............................................................................................................................................................................................................................................2212118.002118212088270000000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCG................................................................................................................................................................2311773.0017731501702541100000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTC...............................................................................................................................................................2411451.001451001425250100000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGT.................................................................................................................................................................2211083.001083107882940000000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTG..................................................................................................................................................................211892.00892336732111100000
..........................................................................................................................................................GGCGAATGTCGGTATGGTCTCC..............................................................................................................................................................................................................................................221709.007090070900000000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTA...............................................................................................................................................................241530.0053010464650000000
........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCT................................................................................................................................................................221468.0046809416420100000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTC................................................................................................................................................................231213.002130021210000000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGA.................................................................................................................................................................221203.002030019580000000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCG....................................................................................................................................................................191195.001954018920000000
..........................................................................................................................................................GGCGAATGTCGGTATGGTCTC...............................................................................................................................................................................................................................................211169.001690016540000000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCA................................................................................................................................................................231168.0016802146191000000
......................................................................................................................................................................................................................................GTGACTAGACCGAACACTCGTGCT................................................................................................................................................................241136.001360013420000000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGT...................................................................................................................................................................201118.001181087300000000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTCT.................................................................................................................................................................221115.001150011500000000
........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCC................................................................................................................................................................22195.0095009500000000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCCT...............................................................................................................................................................24177.0077007160000000
...........................................................................................................................................................................................................................................TAGACCGAACACTCGTGCT................................................................................................................................................................19175.00750059150100000
.........................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCT................................................................................................................................................................21168.00680047201000000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTAT..............................................................................................................................................................25157.00570128270100000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGGC................................................................................................................................................................23155.0055005500000000
..........................................................................................................................................................................................................................................CTAGACCGAACACTCGTGCT................................................................................................................................................................20154.0054004860000000
droEug1
TAAA-------C----------------------TGA----------------------AAAGTAAGTG---------------------ATAAT-TGGCAATCCAG---------------------------------TTTTAAAATTGAATGGCGAATGTCGGTATGGTCGCTTTTTCAA-A---C-----------G------------------------ACTAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATAATCAACAAGCTAA--------G------TGAAAGTTA-AAAA----GCA-----------------AAA-------------------------------AT-----A----AAGA-----------T-CT-----------AAAASizeHit CountTotal NormTotal
No Reads
droBia1
AAAC-------TGAA-AA-ATAC-G-TG-------CC----------------------AAAGTAAGTG---------------------AGAA---GGGCCTCCAG---------------------------------TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCAA-A---C-----------GGTG----ACGATCAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATACTCAACAAGCGAA--------G------TGAA-GTTA-AAGG----TGC-----------------AAG-------------------------------T--------------------------------GGGCCATCAAACTSizeHit CountTotal NormTotal
No Reads
droTak1
CAAA-------GAAA-TA-A------TC-------TC----------------------AAAGTAAGTG---------------------ATACC-AGGCTCTCCAG---------------------------------TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTCAA-A---C-----------GATT----ACCATCAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACATGCTTA--------G------TGAA-GTTA-A-AG----TTA-----------------AAG-------------------------------TT-----AAT----GT-----------GAATGTAGGCAATCTAACTSizeHit CountTotal NormTotal
No Reads
droEle1
CCAT-------ACAA-AG---CCAA-TA-------CA----------------------AAAGTAAGTG---------------------ATAAT-CGGTGCTCCAG--------------------------------TTTTTAAAATTGAATGGCGAATGTCGGTATGGTCGCTTTTTAAA-A---T-----------GGTT----TCGACCAA---------GCGTAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCAACAAGCCAA--------G------TGAT-GTTTTTTAG----TGA-----------------AAG----------------------------------------------------------------AGGCAATCCCCAASizeHit CountTotal NormTotal
No Reads
droRho1
CAAC-------CATA-TAAATACAA-TA-------CA----------------------AAAGTAAGTG---------------------ATAAT-TGGCACTCCAG---------------------------------TTTTAAAATTGAATGGCGAATGTCGGTATGGTCTCTTTTTAAT-A---C-----------GGTT----CCGACCAA---------GCTAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAGTTTTCAACTTGCCTA--------G------TGAA-ATTA-TTAG----TGA-----------------AAA-------------------------------G--------------------------------AAGACATCCAAGASizeHit CountTotal NormTotal
No Reads
droFic1
CAAA-------CCAA-TA-A------TCCA--------------------------------ACAAGTG---------------------AACTTAAGGCTCATCAG---------------------------------TTTTAAAATTAAATGGCGATTGTCGGTATAGTCGCTTTTACAA-A---C-----------ATTT----CCTTTCAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATATTCAACAGACAAG--------G------TGAA-GTTA-CCAG----TGA-----------------AAA-------------------------------A---------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
CAACAGCAGCACCAAGAAAGTAAAGTTCCAAAAGTGA----------------------AAAGAAACAG---------------------CTAAT-T-----ACCAG---------------------------------TTTTAAAATTGAATGGCGATTGTCGGTATGGTCGCTTTTTGAA-A---CCA---------GGTT----CCGATCAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCATCAAGTTAGGGGATAAAG------TGCA-GTTG-TAA-------C-----------------AA-------------------------------GTTAATATATCCA---------------AA-C-----------AAGGSizeHit CountTotal NormTotal
No Reads
droAna3
AGAA-------TCAA-TT---C-----------ATCA---------------------AATTGTAAGTG---------------------ATTTT-TAGCATCAGAA---------------------------------TTTTAAAATTGAATGGCGATTGTCGGTATGGTCGCTTTTTCACAA-AAA----AATT---GGTT----ACCAACAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCATCAAGCTAA-------AG------TGA--CTTG-GAAATGTA--A-----------------AG-T------------------------------TT--------CAAATAATATAC-----CAAT-----------ATAASizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCT................................................................................................................................................................23141249.004124961228095121135643330
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCC................................................................................................................................................................2317839.0078391780729002
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGC.................................................................................................................................................................2214133.0041336732298071326
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTT...............................................................................................................................................................241568.0056819431111214
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTG..................................................................................................................................................................211376.003762225189509
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGAC................................................................................................................................................................231134.0013401340000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGT.................................................................................................................................................................22170.007003633001
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGT...................................................................................................................................................................20170.007012336055
........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCT................................................................................................................................................................22170.007049147000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCG................................................................................................................................................................23167.006704621000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTC...............................................................................................................................................................24160.00601509000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTA...............................................................................................................................................................24145.00452358000
..........................................................................................................................................................GGCGATTGTCGGTATGGTCGCT..............................................................................................................................................................................................................................................22138.00381343000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCG....................................................................................................................................................................19133.00331311000
.........................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCT................................................................................................................................................................21132.00324197002
..........................................................................................................................................................GGCGATTGTCGGTATGGTCGC...............................................................................................................................................................................................................................................21128.00281260001
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGA.................................................................................................................................................................22122.00220201001
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCA................................................................................................................................................................23122.00220165100
..........................................................................................................................................................GGCGATTGTCGGTATGGTCGCC..............................................................................................................................................................................................................................................22117.00170170000
........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGC.................................................................................................................................................................21115.00151131000
..........................................................................................................................................................................................................................................CTAGACCGAACACTCGTGCT................................................................................................................................................................20111.0011065000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTC................................................................................................................................................................2318.008062000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTCT.................................................................................................................................................................2217.007070000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTC.....................................................................................................................................................................1816.006051000
.........................................................................................................................................................TGGCGATTGTCGGTATGGTCGC...............................................................................................................................................................................................................................................2215.005041000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTAT..............................................................................................................................................................2515.005014000
...........................................................................................................................................................................................................................................TAGACCGAACACTCGTGCT................................................................................................................................................................1915.005050000
...........................................................................................................................................................................................................................................TAGACCGAACACTCGTGC.................................................................................................................................................................1815.005041000
........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTG..................................................................................................................................................................2014.004310000
................................................................................................................................................................................TTTTCACAA-AAA----AATT---GGTT----ACCAAC........................................................................................................................................................................................................2614.004040000
........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCC................................................................................................................................................................2214.004040000
................................................................................................................................................................................TTTTCACAA-AAA----AATT---GGTT----ACCA..........................................................................................................................................................................................................2414.004040000
................................................................................................................................................................................TTTTCACAA-AAA----AATT---GGTT----ACC...........................................................................................................................................................................................................2314.004040000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGGC................................................................................................................................................................2314.004040000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTT..................................................................................................................................................................2114.004002011
.........................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCC................................................................................................................................................................2114.004040000
droBip1
AAC---------AAA-GA-A------TCCAGTCATCA----------------------AATGTAAGTG---------------------GTTAT-TAGCATCAGAA---------------------------------TTTTAGAATTGAATGGCGATTGTCGGTATGGTCGCTTTTTTCACAAAAG-----------GGTT----TCCATCAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCAACAAGCTAA-------AG------TG----TTT-------------------------------------------------------------------------CAAATAGTGT-------T-TC-----------TTAASizeHit CountTotal NormTotal
No Reads
dp5
CAAG-------TGTA-CA-AGAA---T------------GGCGA------------TAAAGTGTGTGTG--------------TCGCAGA-------------------------------------AAAAGAAGACAAATTTTAAAATTAAATGGCGATTGTCGGTTTGGTCGCTTTTTACC-A---G-----------GGTT----CCGATCAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAGAATGTTCAACATGGCCA---ACC-AGTGAC----------G-AAAGTGAC---------AAAAGT-GAAA---AAAGTGACAAAGTTTGTGTACACTCCACGAGTTG---------------------ATACCTT-----------ATTGSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCT................................................................................................................................................................231197384.00197384133833115522589773971221015
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGC.................................................................................................................................................................22199256.009925622251671405629785011218
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCC................................................................................................................................................................23129723.00297230172935012922700000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTG..................................................................................................................................................................21113749.00137490106060060667701050
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGT.................................................................................................................................................................2214474.00447408615280285900001
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTT...............................................................................................................................................................2412419.0024190801631670100010
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGT...................................................................................................................................................................201946.00946028163075401000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGAC................................................................................................................................................................231781.00781007801000000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGA.................................................................................................................................................................221425.0042501032109400000
........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCT................................................................................................................................................................221385.0038503113703700000
..........................................................................................................................................................GGCGATTGTCGGTTTGGTCGCT..............................................................................................................................................................................................................................................221347.0034701626306800000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCA................................................................................................................................................................231324.0032402122118100000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCG................................................................................................................................................................231287.002870119868200000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTC...............................................................................................................................................................241287.002870325412801000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTA...............................................................................................................................................................241273.00273013152010800000
........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGC.................................................................................................................................................................211239.0023902042001500000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCG....................................................................................................................................................................191206.002060615414500000
..........................................................................................................................................................GGCGATTGTCGGTTTGGTCGC...............................................................................................................................................................................................................................................211163.001637211902504060
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTC................................................................................................................................................................231124.001240110901400000
..........................................................................................................................................................GGCGATTGTCGGTTTGGTCGCC..............................................................................................................................................................................................................................................221106.00106001050100000
........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTG..................................................................................................................................................................20193.009308820300000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGG.................................................................................................................................................................22145.004502803500000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTC..................................................................................................................................................................21142.004200360600000
.........................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCT................................................................................................................................................................21138.0038091701200000
................................................................................................................................................................................TTTTACC-A---G-----------GGTT----CCGATCAA---------GCGAAG.......................................................................................................................................................................................27134.003400300400000
..........................................................................................................................................................GGCGATTGTCGGTTTGGTCG................................................................................................................................................................................................................................................20131.003113901215000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGC...................................................................................................................................................................20129.002900260300000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTA..................................................................................................................................................................21129.002900200900000
.........................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGC.................................................................................................................................................................20121.002109201000000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTA................................................................................................................................................................23120.0020001001000000
...........................................................................................................................................................................................................................................TAGACCGAACACTCGTGC.................................................................................................................................................................18120.002002101700000
droPer2
CAAG-------TGTA-CA-AGAA---T------------GGCGA------------TAAAGTGTGTGTG--------------TCGCAGA-------------------------------------AAAAGAAGACAAATTTTAAAATTAAATGGCGATTGTCGGTTTGGTCGCTTTTTACC-A---G-----------GGTT----CCGATCAA---------GCGAAGTGACTAGACCGAACACTCGTGCTATAATTTTAGAATGTTCAACATGGCCA---ACC-AGTGAC----------G-GAAGTGAC---------AAAAGT-GAAA---AAAGTGACAAAGTGTGTGTACACTCCACGAGTTG---------------------ATACCTT-----------ATTGSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCT................................................................................................................................................................231112653.0011265392737218192824220192
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGC.................................................................................................................................................................22137199.0037199307858362931316
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCC................................................................................................................................................................2317731.0077317692038010
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTG..................................................................................................................................................................2116311.00631149963412270486
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCG................................................................................................................................................................2313635.0036353609024020
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGG.................................................................................................................................................................2212076.002076206907000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGT.................................................................................................................................................................2211969.00196913842583000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTT...............................................................................................................................................................241665.006655104143080
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCG....................................................................................................................................................................191653.0065364417010
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGT...................................................................................................................................................................201533.005333821146031
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGA.................................................................................................................................................................221378.00378363213000
..........................................................................................................................................................GGCGATTGTCGGTTTGGTCGC...............................................................................................................................................................................................................................................211160.00160134040022
..........................................................................................................................................................GGCGATTGTCGGTTTGGTCGCT..............................................................................................................................................................................................................................................221109.0010998011000
........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCT................................................................................................................................................................22194.009461248010
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGAC................................................................................................................................................................23187.00878601000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTA...............................................................................................................................................................24186.008669017000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCA................................................................................................................................................................23182.008254025030
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTC.....................................................................................................................................................................18165.00656500000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCCT...............................................................................................................................................................24146.00464204000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGG...................................................................................................................................................................20141.00414100000
..........................................................................................................................................................GGCGATTGTCGGTTTGGTCG................................................................................................................................................................................................................................................20135.00353003002
.........................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCT................................................................................................................................................................21133.00332229000
..........................................................................................................................................................................................................................................CTAGACCGAACACTCGTGCT................................................................................................................................................................20124.00242301000
........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGC.................................................................................................................................................................21123.00231364000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTC...............................................................................................................................................................24119.00191306000
...........................................................................................................................................................................................................................................TAGACCGAACACTCGTGCT................................................................................................................................................................19113.0013508000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGAA................................................................................................................................................................23112.00121200000
..........................................................................................................................................................GGCGATTGTCGGTTTGGTCGCC..............................................................................................................................................................................................................................................22110.00101000000
...........................................................................................................................................................................................................................................TAGACCGAACACTCGTGC.................................................................................................................................................................1819.009009000
.........................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGC.................................................................................................................................................................2018.008602000
........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTG..................................................................................................................................................................2018.008431000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTA..................................................................................................................................................................2118.008602000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTA................................................................................................................................................................2317.007403000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCCG...............................................................................................................................................................2416.006600000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGC...................................................................................................................................................................2016.006600000
........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCC................................................................................................................................................................2215.005500000
..........................................................................................................................................................................................................................................CTAGACCGAACACTCGTGC.................................................................................................................................................................1915.005302000
............................................................................................................................................................................................................................................AGACCGAACACTCGTGCT................................................................................................................................................................1814.004301000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCT....................................................................................................................................................................1914.004400000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTC..................................................................................................................................................................2114.004103000
.....................................................................................................................................................................................................................................AGTGACTAGACCGAACACTCGTG..................................................................................................................................................................2313.003012000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGGG................................................................................................................................................................2313.003300000
..........................................................................................................................................................GGCGATTGTCGGTTTGGTC.................................................................................................................................................................................................................................................1913.003200001
........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCG................................................................................................................................................................2213.003300000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCCC...............................................................................................................................................................2413.003300000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTG...............................................................................................................................................................2413.003300000
droWil2
AAGT-------TAGC-CA-A-------C-------CA-----------------------AACTTAGTGAGTG-----------------ACTAT---GCAATTGAA----------------------------ATTACTTTTAAAATTGAATGGCGATTGTCGGTATAGTCTCTTTTTCCA-A---AAA--TCTTGTTTGTTTTTGCCAATCTA------ATAAGAAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCAACAAGCAAC--A-----A------CCAA-CAAG-CTAGTGAG---------AAGAATT----AA-C------------------------------TT----TAACCA---------------AA-TG----------GCGGSizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCT................................................................................................................................................................231463839.00463839674107864596932388
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGC.................................................................................................................................................................22146657.0046657142175046072268
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGT.................................................................................................................................................................2215681.0056818100564617
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTT...............................................................................................................................................................2415244.0052444211520414
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTG..................................................................................................................................................................2115172.00517221320510118
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTA...............................................................................................................................................................2411257.001257016012392
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCC................................................................................................................................................................231683.0068376106006
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGT...................................................................................................................................................................201590.005901015799
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCA................................................................................................................................................................231568.005680705592
........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCT................................................................................................................................................................221367.0036719202731
..........................................................................................................................................................GGCGATTGTCGGTATAGTCTCT..............................................................................................................................................................................................................................................221292.002920002911
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTA................................................................................................................................................................231143.001430001430
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCG................................................................................................................................................................231114.001142200920
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTC...............................................................................................................................................................241100.00100110980
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGA.................................................................................................................................................................22196.0096110940
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTCT.................................................................................................................................................................22192.0092000920
.....................................................................................................................................................................................................................................AGTGACTAGACCGAACACTCGT...................................................................................................................................................................22187.0087000870
.........................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCT................................................................................................................................................................21172.0072030690
..........................................................................................................................................................GGCGATTGTCGGTATAGTCTC...............................................................................................................................................................................................................................................21172.0072000720
.....................................................................................................................................................................................................................................AGTGACTAGACCGAACACTCGTG..................................................................................................................................................................23153.0053010520
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTAT..............................................................................................................................................................25152.0052000520
........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGC.................................................................................................................................................................21137.00370140230
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTG...............................................................................................................................................................24137.0037010360
............................................................................................................................................................................................................................................AGACCGAACACTCGTGCT................................................................................................................................................................18128.0028000271
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCAT...............................................................................................................................................................24126.0026010250
.......................................................................................................................................................AATGGCGATTGTCGGTATAGTC.................................................................................................................................................................................................................................................22124.0024000240
...........................................................................................................................................................................................................................................TAGACCGAACACTCGTGCT................................................................................................................................................................19123.0023000221
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCG....................................................................................................................................................................19122.0022410170
............................................................................................................................................................CGATTGTCGGTATAGTCTCTTT............................................................................................................................................................................................................................................22120.0020000200
..........................................................................................................................................................................................................................................CTAGACCGAACACTCGTGCT................................................................................................................................................................20119.0019000190
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTC................................................................................................................................................................23118.0018000180
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGG.................................................................................................................................................................22117.0017100070
........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCTA...............................................................................................................................................................23117.0017030140
........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCTT...............................................................................................................................................................23115.0015030120
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTC..................................................................................................................................................................21114.0014000140
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCTGC..................................................................................................................................................................21113.0013000130
.......................................................................................................................................................AATGGCGATTGTCGGTATAGT..................................................................................................................................................................................................................................................21111.0011000110
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCCT...............................................................................................................................................................24111.0011000110
.........................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGC.................................................................................................................................................................20110.001001090
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTT..................................................................................................................................................................21110.0010000100
..........................................................................................................................................................................................................................................CTAGACCGAACACTCGTGC.................................................................................................................................................................1919.00901080
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTAT.................................................................................................................................................................2218.00800080
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTG................................................................................................................................................................2318.00800080
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTTT.................................................................................................................................................................2218.00800080
.....................................................................................................................................................................................................................................AGTGACTAGACCGAACACTCG....................................................................................................................................................................2117.00700070
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCGT...............................................................................................................................................................2416.00600060
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGCCT.................................................................................................................................................................2216.00600060
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTC.....................................................................................................................................................................1815.00503020
...........................................................................................................................................................................................................................................TAGACCGAACACTCGTGC.................................................................................................................................................................1815.00501040
........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGT.................................................................................................................................................................2115.00502030
......................................................................................................................................................................................................................................GTGACTAGACCGAACACTCGTGCT................................................................................................................................................................2415.00502030
........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTG..................................................................................................................................................................2014.00402020
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTAT...............................................................................................................................................................2414.00400040
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCCC...............................................................................................................................................................2414.00420020
......................................................................................................................................................................................................................................GTGACTAGACCGAACACTCGTG..................................................................................................................................................................2214.00401030
.....................................................................................................................................................................................................................................AGTGACTAGACCGAACACTCGTGA.................................................................................................................................................................2414.00400040
.....................................................................................................................................................................................................................................AGTGACTAGACCGAACACTCGTT..................................................................................................................................................................2314.00400040
..........................................................................................................................................................GGCGATTGTCGGTATAGTCTCTT.............................................................................................................................................................................................................................................2314.00400040
....................................................................................................................................................................................................................................AAGTGACTAGACCGAACACTCGT...................................................................................................................................................................2314.00400040
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGGCT.................................................................................................................................................................2214.00400040
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTA..................................................................................................................................................................2113.00300030
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGAA................................................................................................................................................................2313.00300030
droVir3
CAGA-------TATT-CC-AGTG----------TTTC----------------------AGTGTGACAG------------TG-------TT--C-CAGTATTCCAGTGTTTCAATTCCAATATTCCA---------GTATTTTAAAATTAAATGGCGATTGTCGGTATGGTCGCTTTTTCAA-A---CAA---------TATA----CCATT-AT-----CTATATAAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCAACGTATATA-------AAAAGC----------A-CAAGTTCT---------CGATTT-GATA---ACCGTCGCAATATATATATATA---TATATA---------------------TCTATATCAT-----------ATAGSizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCT................................................................................................................................................................2312436012.00243601271716461968720113010036335842141414210542562106931859116038191995114939761017122119616719622587918222315371629890114230826462312211078624908047251036028924173063299209540014372398629064112856946104861788420453227931018411169
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGC.................................................................................................................................................................22144003.0044003821106656200000000291001000300010000031601927674200524154305922253161255121084079211638541863125013859859203038146600000156176742101366911669614593334379
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCC................................................................................................................................................................23116543.001654370226013539000000000000000000000000000000104200001526115424918216127315224310749767200014966000002010296300000921933712
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCG....................................................................................................................................................................19115114.00151148802100000000000000000000000000000000310037741456115514601137993208996718768185196005514501218100000710350011012118201610
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCG................................................................................................................................................................23110567.0010567546501370000000001000000000000000000000010003545904655102284053810405631125703416623503420119647100001435000001971322
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGT.................................................................................................................................................................2217294.0072943307400000000001000000000000000001007812120145833623253742336563540677831123223017820059149800000252313014100310114512076106
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTT...............................................................................................................................................................2416460.00646041116800000000012000100010000000000190297813254100092322133002432384542434072401631751591004154871200020281203022009467693336
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTC...............................................................................................................................................................2415195.005195020107500000000000000000010000012001003150003262732244013071643192684752621611791441005631830200013142740002116273357
..........................................................................................................................................................GGCGATTGTCGGTATGGTCGCT..............................................................................................................................................................................................................................................2212134.00213400085000000001700000000000000000060641232585990000201601021142712011100014400000404516200203011853587578
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTA...............................................................................................................................................................2411732.00173201118900000000000001010000000010002502267118100000071038910990721285510048302821000316200000148600422103535391419
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTG..................................................................................................................................................................2111460.00146010140294000000000100010020000000442122410148010063942475747575079403038280008618910000612462130433840432824
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCA................................................................................................................................................................2311130.001130000830000000000000000000000000000405422600002442864502355275231283715010723000000362818700000110224332313
..........................................................................................................................................................GGCGATTGTCGGTATGGTCGC...............................................................................................................................................................................................................................................211676.00676100240000000000000000000000000000001003000017127105493325512846161911120001630000035112001001016141215
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGA.................................................................................................................................................................221635.0063510060000000000000000000000000000000001000000403544442271287018181616000229000004820000000152526913
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGG.................................................................................................................................................................221558.0055847050000000000000000000000000000000000000023425595023513563312246240006330000000101000013230
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTC................................................................................................................................................................231533.0053300013900000000000000000000000000000000000000127233340163022423721291700026260000000200000000200
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGAC................................................................................................................................................................231409.0040906025700000000000000000000000000000000100000071942931671211000110000010400000030000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCCT...............................................................................................................................................................241393.0039300050000000000000000000000000000000010000011516303219532158281729180004400000000200000010021
......................................................................................................................................................................................................................................GTGACTAGACCGAACACTCGTGCT................................................................................................................................................................241315.0031500070000000000000000000000000000000002000004962182183683064360009000000118000000128763
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGAG................................................................................................................................................................231151.001510006000000000000000000000000000000000000614899152257217678000250000000200000000100
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGT...................................................................................................................................................................201145.00145000120100000001000000010000000000020200000006243394620110009440000003800002075313
.........................................................................................................................................................TGGCGATTGTCGGTATGGTCGC...............................................................................................................................................................................................................................................221141.00141000400000000000000000000000000000000010000018766101661842640001050000011500000021431
........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCT................................................................................................................................................................221126.001261013100000000000000000000000000000000100000076624163123200031200000102000001171534
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTC.....................................................................................................................................................................181110.00110000300000000000000000000000000000000000001116811931241341640001200000000200000000000
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTG...............................................................................................................................................................241105.001050001300000000000000000000000000001000000000078443123133752000740000010100000020311
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGAA................................................................................................................................................................23187.008700040000000000000000000000000000000110000019373413331164000100000000600000134710
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTA................................................................................................................................................................23170.007000017000000000000000000000000000010013000000332333231020000290000010300000024110
.......................................................................................................................................................................................................................................TGACTAGACCGAACACT......................................................................................................................................................................17167.0067000000000000000000000000000000000000000000131100212002001000000001121000000201153
.........................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCT................................................................................................................................................................21154.005400022000000000100000000000000000000001000000011015132111000660000001000000000000
..........................................................................................................................................................GGCGATTGTCGGTATGGTCG................................................................................................................................................................................................................................................20153.005300010000000001000000000000000000000000000000000000000000000600000318000000306123
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTG................................................................................................................................................................23145.00450001000000000000000000000000000000001000010111445352223000010000000300000011300
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTTT.................................................................................................................................................................22142.00420003000000000000000000000000000000000000001116046252020000330000000100000001010
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTAT..............................................................................................................................................................25136.00360006000000000000000000000000000000058400000110202011000000032000000000000000000
..........................................................................................................................................................GGCGATTGTCGGTATGGTCGCC..............................................................................................................................................................................................................................................22135.003500033000000000000000000000000000000000000000100000000000000000000000100000000000
.........................................................................................................................................................TGGCGATTGTCGGTATGGTCGCT..............................................................................................................................................................................................................................................23131.00310001000000000000000000000000000000101500001111011000000000000000040400000012132
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTGT...............................................................................................................................................................24128.00280002000000000000000000000000000000000000000120141040421000220000000000000000101
......................................................................................................................................................................................................................................GTGACTAGACCGAACACTCGTGC.................................................................................................................................................................23128.00280007000000000000000000000000000000000000000040001000000000000000003500000031112
..........................................................................................................................................................................................................................................CTAGACCGAACACTCGTGCT................................................................................................................................................................20126.00260002000000000000000000000000000000000000000220036041002100120000000000000000000
droMoj3
CAGT-------GTT---------------------TC----------------------ACTATCAGTGTTTCACTTTCAGTGTTTCATT------------TCCAG--------------TGTTCGAAAATTATA-AAATTTTAAAATTAAATGGCGATTGTCGGTATGGTCTCTTTTTCAA-C---ATA---------TA--------CACCAAACATTCTATATAAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCAACAATTTCAATT-----A------TAAA-ATTT-CTAG----TGCATGGTTCAAACT-TAAA---AAGAAAACAAAA----------------------------------------TCTATATCGT-----------ATAGSizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCT................................................................................................................................................................2311201864.00120186419135541225106626611
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCC................................................................................................................................................................231229220.002292200225002289950
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGC.................................................................................................................................................................221172966.00172966913735201592200
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTT...............................................................................................................................................................24124007.00240070144610225591
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGT.................................................................................................................................................................22110104.0010104026050074990
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTC...............................................................................................................................................................2416588.00658812340063521
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTG..................................................................................................................................................................2114274.00427427120035600
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGAC................................................................................................................................................................2313832.003832020038300
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTA...............................................................................................................................................................2413555.00355513610031930
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCG................................................................................................................................................................2311832.0018320840017480
..........................................................................................................................................................GGCGATTGTCGGTATGGTCTCT..............................................................................................................................................................................................................................................2211086.0010860100010760
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCA................................................................................................................................................................2311020.001020075009450
........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCT................................................................................................................................................................221930.00930358008690
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGA.................................................................................................................................................................221776.00776027017480
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGTC................................................................................................................................................................231494.0049409004850
..........................................................................................................................................................GGCGATTGTCGGTATGGTCTCC..............................................................................................................................................................................................................................................221382.0038200003820
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCG....................................................................................................................................................................191325.0032507003180
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTTC..............................................................................................................................................................251277.00277010002670
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTAT..............................................................................................................................................................251241.00241072001690
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGT...................................................................................................................................................................201237.00237296001390
........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGCC................................................................................................................................................................221217.0021700002170
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTCT.................................................................................................................................................................221170.0017001001690
...........................................................................................................................................................................................................................................TAGACCGAACACTCGTGCT................................................................................................................................................................191159.00159047001120
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTG...............................................................................................................................................................241136.00136014001220
.........................................................................................................................................................................................................................................ACTAGACCGAACACTCGTGCT................................................................................................................................................................211136.00136013001230
..........................................................................................................................................................GGCGATTGTCGGTATGGTCTC...............................................................................................................................................................................................................................................211118.0011804001140
........................................................................................................................................................................................................................................GACTAGACCGAACACTCGTGC.................................................................................................................................................................211116.0011608001080
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTCC..............................................................................................................................................................251103.001030500980
..........................................................................................................................................................................................................................................CTAGACCGAACACTCGTGCT................................................................................................................................................................20198.009801100870
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCCT...............................................................................................................................................................24180.00800700730
droGri2
TAAA-------GAAA-AG---AA---TATA-----AAATGGTGAATTTTGCAGTGT----TTTGCAGTGTTTT---GTGTGTGTTGCAGT-CAA---ACCCAGCCAG-------------------------------TATTTTAAAATTAAATGGCGATTGTCGGTATGGTCGCTTTTGAA--C---CTAAACTCT---ATAT----ACAATA--------TATATAAAGTGACTAGACCGAACACTCGTGCTATAATTTTAAAATGTTCAACATAGGCA----TC-AGTTTTGGTTAA-ATGA-AAAA----TGA-----------------TA-A------------------------------AT--------CGA--------TCTATATTTT-----------ATAGSizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCT................................................................................................................................................................23219.0038533
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGC.................................................................................................................................................................2221.50321
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTG..................................................................................................................................................................2121.00220
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCA................................................................................................................................................................2320.50101
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGT.................................................................................................................................................................2220.50110
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGTGCTT...............................................................................................................................................................2420.50101
.......................................................................................................................................................................................................................................TGACTAGACCGAACACTCGT...................................................................................................................................................................2020.50101

Generated: 10/20/2015 at 06:49 PM