ID:

dse-mir-285

 Coordinate:

scaffold_0:4127828-4127925 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

3pUTR

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-30.0 -29.9 -29.6

Flybase annnotation

utr3 [utr3_minus_5513]; pre_miRNA [Dsec\mir-285-RM]; miRNA [Dsec\miR-285-RA]

No Repeatable elements found

Sense Strand Reads

TGCAAAGGGTTCAGGATCGGAAACAGGAGCTACCAACTTGCCCATCCACTTCAAATCGAAGAACTGAGATCGATTGGTGCATAGATATCAGGAAAACCCACTCAATTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCGAAGTGTCAAATCGAAGCGAACTTCAAATGTGCTGTTAAATA

***********************************************..(((..(((((((.(((((..((((.((((((.((((......((........))........)))))))))).))))..)))))..)))))))..)))..************************************************* 		Read size # Mismatch Hit Count Total Norm Total V115

head

 V113

male body		 M054

female body

 V114

embryo
.................................................................................................................TAGCACCATTCGAAATCAGTG................................................................ 21 0 1 36390.00 36390 36258 26 58 48
.................................................................................................................TAGCACCATTCGAAATCAGTGCT.............................................................. 23 0 1 30965.00 30965 30800 66 62 37
.................................................................................................................TAGCACCATTCGAAATCAGTGC............................................................... 22 0 1 14280.00 14280 14125 33 93 29
.................................................................................................................TAGCACCATTCGAAATCAGT................................................................. 20 0 1 7051.00 7051 6991 45 7 8
.................................................................................................................TAGCACCATTCGAAATCAGTGT............................................................... 22 1 1 3508.00 3508 3469 25 12 2
.................................................................................................................TAGCACCATTCGAAATCAG.................................................................. 19 0 1 2366.00 2366 2360 2 1 3
.................................................................................................................TAGCACCATTCGAAATCAGTGA............................................................... 22 1 1 2154.00 2154 2152 0 1 1
..............................................................ACTGAGATCGATTGGTGCATAGA................................................................................................................. 23 0 1 1575.00 1575 1511 52 4 8
.................................................................................................................TAGCACCATTCGAAATCAGTGTT.............................................................. 23 1 1 906.00 906 898 4 2 2
.................................................................................................................TAGCACCATTCGAAATCAGTGCA.............................................................. 23 1 1 437.00 437 436 0 1 0
..............................................................ACTGAGATCGATTGGTGCAT.................................................................................................................... 20 0 1 358.00 358 352 5 1 0
..............................................................ACTGAGATCGATTGGTGCATAG.................................................................................................................. 22 0 1 256.00 256 248 5 3 0
.............................................................AACTGAGATCGATTGGTGCAT.................................................................................................................... 21 0 1 191.00 191 186 5 0 0
.................................................................................................................TAGCACCATTCGAAATCA................................................................... 18 0 1 148.00 148 148 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGTT................................................................ 21 1 1 135.00 135 133 2 0 0
....................................................................................................................CACCATTCGAAATCAGTG................................................................ 18 0 1 131.00 131 131 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGTA................................................................ 21 1 1 115.00 115 115 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGA................................................................. 20 1 1 115.00 115 115 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGTGAA.............................................................. 23 2 1 109.00 109 109 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGTGTA.............................................................. 23 2 1 109.00 109 109 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGTGCTT............................................................. 24 0 1 86.00 86 85 0 1 0
.............................................................AACTGAGATCGATTGGTGCATAGA................................................................................................................. 24 0 1 85.00 85 84 1 0 0
.................................................................................................................TATCACCATTCGAAATCAGTG................................................................ 21 1 1 83.00 83 82 1 0 0
.................................................................................................................TAGCACCATTCGAAATCAGTGCC.............................................................. 23 1 1 80.00 80 79 0 1 0
.................................................................................................................TAGCACCATTCGAAATCAGCG................................................................ 21 1 1 77.00 77 77 0 0 0
.................................................................................................................TAGCACAATTCGAAATCAGTG................................................................ 21 1 1 73.00 73 73 0 0 0
.................................................................................................................TAGCACAATTCGAAATCAGTGCT.............................................................. 23 1 1 71.00 71 71 0 0 0
..............................................................ACTGAGATCGATTGGTGCATA................................................................................................................... 21 0 1 71.00 71 69 0 1 1
.................................................................................................................TAGCACCATTCGAAATCAGCGCT.............................................................. 23 1 1 70.00 70 70 0 0 0
................................................................................................................CTAGCACCATTCGAAATCAGTG................................................................ 22 0 1 68.00 68 68 0 0 0
.................................................................................................................TAGCAACATTCGAAATCAGTG................................................................ 21 1 1 62.00 62 61 0 1 0
.................................................................................................................TATCACCATTCGAAATCAGTGC............................................................... 22 1 1 61.00 61 58 1 2 0
.................................................................................................................TAGCACCATTCGAAATCAATG................................................................ 21 1 1 61.00 61 61 0 0 0
.................................................................................................................TATCACCATTCGAAATCAGTGCT.............................................................. 23 1 1 57.00 57 55 0 2 0
.................................................................................................................TAGAACCATTCGAAATCAGTGCT.............................................................. 23 1 1 52.00 52 50 0 2 0
.................................................................................................................TAGCAACATTCGAAATCAGTGCT.............................................................. 23 1 1 51.00 51 51 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGTGG............................................................... 22 1 1 49.00 49 49 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGAGCT.............................................................. 23 1 1 47.00 47 47 0 0 0
.................................................................................................................TACCACCATTCGAAATCAGTG................................................................ 21 1 1 46.00 46 45 0 1 0
.............................................................AACTGAGATCGATTGGTGCATAG.................................................................................................................. 23 0 1 45.00 45 45 0 0 0
................................................................................................................CTAGCACCATTCGAAATCAGTGCT.............................................................. 24 0 1 44.00 44 44 0 0 0
.................................................................................................................TAGAACCATTCGAAATCAGTG................................................................ 21 1 1 43.00 43 43 0 0 0
.................................................................................................................TAGCACCATTCGAAATCATTG................................................................ 21 1 1 42.00 42 41 0 1 0
.................................................................................................................TAGCACCATTCGAAATCAGAG................................................................ 21 1 1 42.00 42 42 0 0 0
.................................................................................................................TAGCACCATACGAAATCAGTG................................................................ 21 1 1 41.00 41 41 0 0 0
..................................................................................................................AGCACCATTCGAAATCAGTG................................................................ 20 0 1 40.00 40 36 0 4 0
.................................................................................................................TAGCACCATTCGAAATCAGCGC............................................................... 22 1 1 40.00 40 40 0 0 0
..............................................................ACTGAGATCGATTGGTGCA..................................................................................................................... 19 0 1 40.00 40 40 0 0 0
.................................................................................................................TAGCACCATTCGAAGTCAGTG................................................................ 21 1 1 39.00 39 39 0 0 0
.................................................................................................................TACCACCATTCGAAATCAGTGC............................................................... 22 1 1 37.00 37 37 0 0 0
.................................................................................................................TAGCACCATTCGAAATCACTG................................................................ 21 1 1 36.00 36 35 1 0 0
.................................................................................................................TAGCACCATTCGAAATCAATGCT.............................................................. 23 1 1 36.00 36 34 2 0 0
..............................................................ACTGAGATCGATTGGTGCATAGAA................................................................................................................ 24 1 1 36.00 36 35 1 0 0
.................................................................................................................TAGCACCATTCGAAATCAGTGAT.............................................................. 23 1 1 36.00 36 36 0 0 0
.................................................................................................................TAGCACCATTCAAAATCAGTG................................................................ 21 1 1 35.00 35 35 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGGGCT.............................................................. 23 1 1 35.00 35 34 0 1 0
.................................................................................................................TAGCACCATTCAAAATCAGTGCT.............................................................. 23 1 1 35.00 35 35 0 0 0
.................................................................................................................TAGCACAATTCGAAATCAGTGC............................................................... 22 1 1 34.00 34 34 0 0 0
.................................................................................................................CAGCACCATTCGAAATCAGTG................................................................ 21 1 1 33.00 33 33 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAA.................................................................. 19 1 1 33.00 33 33 0 0 0
..................................................................................................................AGCACCATTCGAAATCAGTGCT.............................................................. 22 0 1 33.00 33 29 0 4 0
.................................................................................................................TAGCACCATTCGAAATCAGTC................................................................ 21 1 1 33.00 33 33 0 0 0
.................................................................................................................TAGCACCATTCGAAGTCAGTGCT.............................................................. 23 1 1 33.00 33 33 0 0 0
.................................................................................................................TAGCACCATTCGAAATCATTGCT.............................................................. 23 1 1 33.00 33 32 1 0 0
.................................................................................................................TGGCACCATTCGAAATCAGTG................................................................ 21 1 1 32.00 32 32 0 0 0
.................................................................................................................TAGCACCACTCGAAATCAGTG................................................................ 21 1 1 32.00 32 32 0 0 0
.................................................................................................................TAGCACCATACGAAATCAGTGCT.............................................................. 23 1 1 31.00 31 31 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGTTCT.............................................................. 23 1 1 31.00 31 29 1 1 0
.................................................................................................................TAGCACCATTCGGAATCAGTG................................................................ 21 1 1 30.00 30 30 0 0 0
.................................................................................................................AAGCACCATTCGAAATCAGTG................................................................ 21 1 1 30.00 30 30 0 0 0
.................................................................................................................TAGCACCATTCGAAATCATTGC............................................................... 22 1 1 29.00 29 28 0 0 1
.................................................................................................................TAGCACTATTCGAAATCAGTG................................................................ 21 1 1 29.00 29 28 0 0 1
.................................................................................................................TAGCACCATTCGAAATCACTGCT.............................................................. 23 1 1 28.00 28 27 1 0 0
.................................................................................................................TAGCACCATCCGAAATCAGTG................................................................ 21 1 1 28.00 28 28 0 0 0
.................................................................................................................TAGCACCACTCGAAATCAGTGCT.............................................................. 23 1 1 28.00 28 27 0 0 1
.................................................................................................................TAGCACCATCCGAAATCAGTGCT.............................................................. 23 1 1 28.00 28 27 1 0 0
.................................................................................................................TAGCACCATTTGAAATCAGTG................................................................ 21 1 1 28.00 28 28 0 0 0
.................................................................................................................TAGCACCATTCGAGATCAGTGCT.............................................................. 23 1 1 28.00 28 28 0 0 0
.................................................................................................................TACCACCATTCGAAATCAGTGCT.............................................................. 23 1 1 28.00 28 27 1 0 0
.................................................................................................................TAGCACCATTCGAAATTAGTGCT.............................................................. 23 1 1 27.00 27 27 0 0 0
.................................................................................................................TAGCGCCATTCGAAATCAGTGCT.............................................................. 23 1 1 27.00 27 27 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGTTT............................................................... 22 2 1 27.00 27 25 1 1 0
.................................................................................................................TAGCGCCATTCGAAATCAGTG................................................................ 21 1 1 27.00 27 27 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAATGC............................................................... 22 1 1 26.00 26 26 0 0 0
................................................................................................................CTAGCACCATTCGAAATCAGTGC............................................................... 23 0 1 26.00 26 24 0 2 0
.................................................................................................................TAGCACCATTCGAACTCAGTG................................................................ 21 1 1 26.00 26 26 0 0 0
.................................................................................................................GAGCACCATTCGAAATCAGTG................................................................ 21 1 1 26.00 26 26 0 0 0
.................................................................................................................TAGCACCGTTCGAAATCAGTG................................................................ 21 1 1 25.00 25 24 0 1 0
................................................................TGAGATCGATTGGTGCATAGA................................................................................................................. 21 0 1 24.00 24 21 1 2 0
.................................................................................................................TAGCACCATTCTAAATCAGTG................................................................ 21 1 1 24.00 24 24 0 0 0
.................................................................................................................TAGCACCATTCGAAATAAGTGCT.............................................................. 23 1 1 24.00 24 24 0 0 0
.................................................................................................................TAGCACCATTCGAAATCGGTGCT.............................................................. 23 1 1 24.00 24 24 0 0 0
.................................................................................................................TAGCACCATTCGCAATCAGTG................................................................ 21 1 1 24.00 24 24 0 0 0
.................................................................................................................CAGCACCATTCGAAATCAGTGCT.............................................................. 23 1 1 23.00 23 23 0 0 0
.................................................................................................................TAGCACCATTCGAAATCGGTG................................................................ 21 1 1 23.00 23 23 0 0 0
.................................................................................................................TAGCACCGTTCGAAATCAGTGCT.............................................................. 23 1 1 23.00 23 23 0 0 0
.................................................................................................................TAGCACCACTCGAAATCAGTGC............................................................... 22 1 1 22.00 22 22 0 0 0
.................................................................................................................TAGCATCATTCGAAATCAGTG................................................................ 21 1 1 22.00 22 22 0 0 0
.................................................................................................................TAGCCCCATTCGAAATCAGTG................................................................ 21 1 1 22.00 22 22 0 0 0
.................................................................................................................TGGCACCATTCGAAATCAGTGCT.............................................................. 23 1 1 22.00 22 22 0 0 0
.................................................................................................................TAGCACCATTCGAGATCAGTG................................................................ 21 1 1 22.00 22 22 0 0 0
...............................................................CTGAGATCGATTGGTGCATAGA................................................................................................................. 22 0 1 22.00 22 20 1 1 0
.................................................................................................................TAGCACCATTCGAAATCAGTACT.............................................................. 23 1 1 21.00 21 21 0 0 0
.................................................................................................................TAGCCCCATTCGAAATCAGTGCT.............................................................. 23 1 1 21.00 21 21 0 0 0
..............................................................ACTGAGATCGATTGGTGCATAGT................................................................................................................. 23 1 1 21.00 21 21 0 0 0
.................................................................................................................TAACACCATTCGAAATCAGTG................................................................ 21 1 1 21.00 21 21 0 0 0
.................................................................................................................TAGCACCATTCCAAATCAGTG................................................................ 21 1 1 21.00 21 21 0 0 0
.................................................................................................................TAGCACCATTCGAAATAAGTG................................................................ 21 1 1 21.00 21 21 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGAGC............................................................... 22 1 1 21.00 21 21 0 0 0
................................................................TGAGATCGATTGGTGCATAGAT................................................................................................................ 22 0 1 20.00 20 20 0 0 0
.................................................................................................................TAGCACCATTAGAAATCAGTG................................................................ 21 1 1 19.00 19 19 0 0 0
.................................................................................................................TAGCACTATTCGAAATCAGTGCT.............................................................. 23 1 1 19.00 19 19 0 0 0
.................................................................................................................TAGCACCATTCTAAATCAGTGCT.............................................................. 23 1 1 19.00 19 19 0 0 0
.................................................................................................................TAGTACCATTCGAAATCAGTG................................................................ 21 1 1 19.00 19 19 0 0 0
.................................................................................................................TAGCACCATTCGAAACCAGTGCT.............................................................. 23 1 1 19.00 19 19 0 0 0
.................................................................................................................TAGCACCATTCGAAATTAGTG................................................................ 21 1 1 19.00 19 19 0 0 0
.................................................................................................................TAGCATCATTCGAAATCAGTGCT.............................................................. 23 1 1 19.00 19 19 0 0 0
.................................................................................................................TAGCACCATTCGAAGTCAGTGC............................................................... 22 1 1 18.00 18 18 0 0 0
.................................................................................................................TAGCACCATTTGAAATCAGTGCT.............................................................. 23 1 1 18.00 18 18 0 0 0
..................................................................................................................AGCACCATTCGAAATCAGTGC............................................................... 21 0 1 18.00 18 13 0 5 0
.................................................................................................................TAGCACCATTCGAAATCAGC................................................................. 20 1 1 18.00 18 18 0 0 0
.................................................................................................................TAGTACCATTCGAAATCAGTGCT.............................................................. 23 1 1 17.00 17 17 0 0 0
.................................................................................................................TATCACCATTCGAAATCAGT................................................................. 20 1 1 17.00 17 17 0 0 0
.................................................................................................................TAGCACCATACGAAATCAGTGC............................................................... 22 1 1 17.00 17 17 0 0 0
.................................................................................................................TAGCACCATTCAAAATCAGTGC............................................................... 22 1 1 17.00 17 17 0 0 0
.................................................................................................................TAGCACCATTCGCAATCAGTGCT.............................................................. 23 1 1 16.00 16 16 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGTCC............................................................... 22 1 1 16.00 16 16 0 0 0
.................................................................................................................TAGCACCATTCGAACTCAGTGCT.............................................................. 23 1 1 16.00 16 16 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGTAA............................................................... 22 2 1 16.00 16 16 0 0 0
.................................................................................................................TAGCAACATTCGAAATCAGT................................................................. 20 1 1 16.00 16 16 0 0 0
.................................................................................................................TAGCACCCTTCGAAATCAGTGCT.............................................................. 23 1 1 16.00 16 16 0 0 0
.................................................................................................................AAGCACCATTCGAAATCAGTGCT.............................................................. 23 1 1 16.00 16 16 0 0 0
.................................................................................................................TAGCAACATTCGAAATCAGTGC............................................................... 22 1 1 15.00 15 15 0 0 0
.................................................................................................................TAGCACCAATCGAAATCAGTG................................................................ 21 1 1 15.00 15 15 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGTCCT.............................................................. 23 1 1 15.00 15 15 0 0 0
.................................................................................................................TAGCACCATTCGAAATCACTGC............................................................... 22 1 1 15.00 15 14 0 0 1
...............................................................CTGAGATCGATTGGTGCATAG.................................................................................................................. 21 0 1 15.00 15 15 0 0 0
.................................................................................................................TACCACCATTCGAAATCAGT................................................................. 20 1 1 15.00 15 15 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGTAC............................................................... 22 1 1 14.00 14 14 0 0 0
.................................................................................................................TAGTACCATTCGAAATCAGTGC............................................................... 22 1 1 14.00 14 12 0 0 2
.................................................................................................................TAGCACAATTCGAAATCAGT................................................................. 20 1 1 14.00 14 14 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAAT................................................................. 20 1 1 14.00 14 14 0 0 0
.................................................................................................................TAGCACCATTCGAAACCAGTG................................................................ 21 1 1 14.00 14 14 0 0 0
..............................................................ACTGAGATCGATTGGTGCATAGAAA............................................................................................................... 25 1 1 13.00 13 13 0 0 0
.................................................................................................................TAGCACCATTCGAAATCCGTG................................................................ 21 1 1 13.00 13 13 0 0 0
....................................................................................................................CACCATTCGAAATCAGTGC............................................................... 19 0 1 13.00 13 13 0 0 0
................................................................TGAGATCGATTGGTGCATAG.................................................................................................................. 20 0 1 13.00 13 13 0 0 0
.................................................................................................................TAGCGCCATTCGAAATCAGTGC............................................................... 22 1 1 13.00 13 13 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGGGC............................................................... 22 1 1 13.00 13 12 0 1 0
................................................................................................................CTAGCACCATTCGAAATCAG.................................................................. 20 0 1 13.00 13 13 0 0 0
...................................................................................................................GCACCATTCGAAATCAGTGCT.............................................................. 21 0 1 12.00 12 12 0 0 0
.................................................................................................................TAGCACCATTCGAAATCCGTGCT.............................................................. 23 1 1 12.00 12 12 0 0 0
.................................................................................................................TAGCACCATTCGGAATCAGTGCT.............................................................. 23 1 1 12.00 12 12 0 0 0
.................................................................................................................TAGCACCATTCCAAATCAGTGCT.............................................................. 23 1 1 12.00 12 12 0 0 0
.................................................................................................................TAGCACCAAACGAAATCAGTG................................................................ 21 2 1 12.00 12 12 0 0 0
.................................................................................................................TCGCACCATTCGAAATCAGTG................................................................ 21 1 1 11.00 11 11 0 0 0
.................................................................................................................TAGTACCATTCGAAATCAGT................................................................. 20 1 1 11.00 11 11 0 0 0
.................................................................................................................TCGCACCATTCGAAATCAGTGCT.............................................................. 23 1 1 11.00 11 11 0 0 0
.................................................................................................................TAGCAACATTCGAAATCAGTGAT.............................................................. 23 2 1 11.00 11 11 0 0 0
................................................................................................................CTAGCACCATTCGAAATCAGT................................................................. 21 0 1 11.00 11 11 0 0 0
.................................................................................................................TAGAACCATTCGAAATCAGT................................................................. 20 1 1 11.00 11 11 0 0 0
.................................................................................................................TAACACCATTCGAAATCAGTGC............................................................... 22 1 1 11.00 11 11 0 0 0
.................................................................................................................TAGCACCATTCAAAATCAGT................................................................. 20 1 1 10.00 10 10 0 0 0
.................................................................................................................TAGCACTATTCGAAATCAGTGC............................................................... 22 1 1 10.00 10 10 0 0 0
.................................................................................................................TAGCACCTTTCGAAATCAGTG................................................................ 21 1 1 10.00 10 10 0 0 0
.................................................................................................................CAGCACCATTCGAAATCAGTGC............................................................... 22 1 1 10.00 10 9 1 0 0
.............................................................AACTGAGATCGATTGGTGCATA................................................................................................................... 22 0 1 10.00 10 10 0 0 0
.................................................................................................................TAGAACCATTCGAAATCAGTGC............................................................... 22 1 1 10.00 10 10 0 0 0
...................................................................................................................GCACCATTCGAAATCAGTG................................................................ 19 0 1 10.00 10 10 0 0 0
.................................................................................................................TAGCACCATTAGAAATCAGTGCT.............................................................. 23 1 1 10.00 10 10 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGTTC............................................................... 22 1 1 10.00 10 10 0 0 0
.................................................................................................................AAGCACCATTCGAAATCAGTGC............................................................... 22 1 1 10.00 10 10 0 0 0
.................................................................................................................GAGCACCATTCGAAATCAGTGCT.............................................................. 23 1 1 10.00 10 10 0 0 0
.................................................................................................................TAGCACCATTAGAAATCAGTGC............................................................... 22 1 1 10.00 10 10 0 0 0
.................................................................................................................TAGCACCATCCGAAATCAGTGC............................................................... 22 1 1 10.00 10 9 0 1 0
.................................................................................................................TAGCACCAATCGAAATCAGTGCT.............................................................. 23 1 1 9.00 9 9 0 0 0
.................................................................................................................TAGCAACATTCGAAATCAGTGT............................................................... 22 2 1 9.00 9 9 0 0 0
.................................................................................................................TAGCACAATTCGAAATCAGTGT............................................................... 22 2 1 9.00 9 9 0 0 0
.................................................................................................................TAACACCATTCGAAATCAGTGCT.............................................................. 23 1 1 9.00 9 9 0 0 0
.....................................................................................TATCAGGAAAACCCACTCAATT........................................................................................... 22 0 1 9.00 9 9 0 0 0
.................................................................................................................TAGCACCATTCGAGATCAGTGC............................................................... 22 1 1 9.00 9 9 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGTGGT.............................................................. 23 1 1 9.00 9 9 0 0 0
.................................................................................................................TAGCACCGTTCGAAATCAGTGC............................................................... 22 1 1 9.00 9 8 1 0 0
.................................................................................................................TAGCACCATTCGAACTCAGTGC............................................................... 22 1 1 9.00 9 9 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGCGT............................................................... 22 2 1 8.00 8 8 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAT.................................................................. 19 1 1 8.00 8 8 0 0 0
.................................................................................................................TGGCACCATTCGAAATCAGTGC............................................................... 22 1 1 8.00 8 8 0 0 0
.................................................................................................................TAGCACCATTCGAAATCGGT................................................................. 20 1 1 8.00 8 8 0 0 0
.................................................................................................................TAGCAACATTCGAAATCAGTGA............................................................... 22 2 1 8.00 8 8 0 0 0
.................................................................................................................TAGCACCATTCGAAATAAGTGC............................................................... 22 1 1 8.00 8 8 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGTTA............................................................... 22 2 1 8.00 8 8 0 0 0
.................................................................................................................TAGCACCATTCGAACTCAGT................................................................. 20 1 1 8.00 8 8 0 0 0
.................................................................................................................TAGCACCATTGGAAATCAGTG................................................................ 21 1 1 8.00 8 8 0 0 0
.................................................................................................................TAGCATCATTCGAAATCAGTGC............................................................... 22 1 1 8.00 8 7 0 0 1
..............................................................ACTGAGATCGATTGGTGCATAGAT................................................................................................................ 24 0 1 8.00 8 7 1 0 0
.................................................................................................................TAGCACCATTTGAAATCAGTGC............................................................... 22 1 1 8.00 8 8 0 0 0
.................................................................................................................TAGCACCCTTCGAAATCAGTG................................................................ 21 1 1 8.00 8 8 0 0 0
.................................................................................................................CAGCACCATTCGAAATCAGT................................................................. 20 1 1 8.00 8 8 0 0 0
................................................................................................................CTAGCACCATTCGAAATCAGTGA............................................................... 23 1 1 7.00 7 7 0 0 0
..............................................................ACTGATATCGATTGGTGCATAGA................................................................................................................. 23 1 1 7.00 7 7 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGTGAAA............................................................. 24 3 1 7.00 7 7 0 0 0
..................................................................................................................AGCACCATTCGAAATCAGT................................................................. 19 0 1 7.00 7 6 0 1 0
....................................................................................................................CACCATTCGAAATCAGTGCT.............................................................. 20 0 1 7.00 7 6 0 1 0
.................................................................................................................TATCACCATTCGAAATCAGTGT............................................................... 22 2 1 7.00 7 7 0 0 0
.................................................................................................................TAGCAGCATTCGAAATCAGTGC............................................................... 22 1 1 7.00 7 7 0 0 0
.................................................................................................................TAGAACCATTCGAAATCAGTGT............................................................... 22 2 1 7.00 7 6 0 1 0
.................................................................................................................TAGCACCATTCGGAATCAGTGC............................................................... 22 1 1 7.00 7 7 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGTGCG.............................................................. 23 1 1 7.00 7 6 0 1 0
................................................................................................................CTAGCACCATTCGAAATCAGTGT............................................................... 23 1 1 7.00 7 7 0 0 0
.................................................................................................................TAGCACCATTCCAAATCAGT................................................................. 20 1 1 7.00 7 7 0 0 0
.................................................................................................................TAGCACCATTCGAAATCCGT................................................................. 20 1 1 7.00 7 7 0 0 0
.................................................................................................................TAGCACCATTTGAAATCAGT................................................................. 20 1 1 7.00 7 7 0 0 0
.....................................................................................TATCAGGAAAACCCACTCAAT............................................................................................ 21 0 1 6.00 6 6 0 0 0
.................................................................................................................TGGCACCATTCGAAATCAGT................................................................. 20 1 1 6.00 6 6 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGGG................................................................ 21 1 1 6.00 6 6 0 0 0
.................................................................................................................TAGCACCATTCGACATCAGTGC............................................................... 22 1 1 6.00 6 6 0 0 0
.................................................................................................................TAGCACAATTCGAAATCAG.................................................................. 19 1 1 6.00 6 6 0 0 0
.................................................................................................................TAGCACCATTCGACATCAGTGCT.............................................................. 23 1 1 6.00 6 6 0 0 0
.................................................................................................................TAGCACCATTCGTAATCAGTG................................................................ 21 1 1 6.00 6 6 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGTGCTTT............................................................ 25 0 1 6.00 6 5 0 1 0
..................................................................................................................TCCACCATTCGAAATCAGTGC............................................................... 21 2 1 6.00 6 6 0 0 0
.................................................................................................................TAGCACCATTCGAAATCGGTGC............................................................... 22 1 1 6.00 6 6 0 0 0
.................................................................................................................TAGCACCATACGAAATCAGT................................................................. 20 1 1 6.00 6 6 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGTGCCT............................................................. 24 1 1 6.00 6 6 0 0 0
.................................................................................................................TAGCACCATTCGAAATCACTGT............................................................... 22 2 1 6.00 6 4 2 0 0
.................................................................................................................TAGCACCATTCGAAATCATT................................................................. 20 1 1 5.00 5 5 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGTGGA.............................................................. 23 2 1 5.00 5 5 0 0 0
.................................................................................................................TAGCACGATTCGAAATCAGTGCT.............................................................. 23 1 1 5.00 5 5 0 0 0
..............................................................ACTGAGATCGATTGGTGCATAGAAAA.............................................................................................................. 26 2 1 5.00 5 5 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGAA................................................................ 21 2 1 5.00 5 5 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAATGT............................................................... 22 2 1 5.00 5 5 0 0 0
.................................................................................................................TAGCACCATTCGAAATCCGTGC............................................................... 22 1 1 5.00 5 4 0 1 0
.................................................................................................................TAGCACCATTGGAAATCAGTGCT.............................................................. 23 1 1 5.00 5 5 0 0 0
.................................................................................................................TAGCACCCTTCGAAATCAGTGC............................................................... 22 1 1 5.00 5 5 0 0 0
.............................................................AACTGAGATCGATTGGTGCA..................................................................................................................... 20 0 1 5.00 5 5 0 0 0
.................................................................................................................TTGCACCATTCGAAATCAGTG................................................................ 21 1 1 5.00 5 5 0 0 0
.................................................................................................................TAACACCATTCGAAATCAGT................................................................. 20 1 1 5.00 5 5 0 0 0
.................................................................................................................TAGCACCATAAGAAATCAGTG................................................................ 21 2 1 5.00 5 5 0 0 0
..............................................................ACTGAGATCAATTGGTGCATAGA................................................................................................................. 23 1 1 5.00 5 5 0 0 0
..............................................................ACTGAGATCGATTGGTGCATAGAAAAA............................................................................................................. 27 3 1 5.00 5 5 0 0 0
.................................................................................................................TAGCACCATTCTAAATCAGTGC............................................................... 22 1 1 5.00 5 5 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGTGCTA............................................................. 24 1 1 5.00 5 5 0 0 0
.................................................................................................................TAGCGCCATTCGAAATCAGTGT............................................................... 22 2 1 5.00 5 5 0 0 0
.................................................................................................................TAGCACCATTCGAAATAAGTGT............................................................... 22 2 1 5.00 5 5 0 0 0
.................................................................................................................TAGCACCATTCGAAATAAGT................................................................. 20 1 1 5.00 5 5 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGTGTTT............................................................. 24 1 1 5.00 5 5 0 0 0
.....................................................................................TATCAGGAAAACCCACTCAATTCA......................................................................................... 24 0 1 5.00 5 5 0 0 0
.................................................................................................................TAGCACCAATCGAAATCAGTGC............................................................... 22 1 1 5.00 5 5 0 0 0
.....................................................................................TATCAGGAAAACCCACTCAATTCAACT...................................................................................... 27 0 1 5.00 5 4 0 1 0
.....................................................................................................................ACCATTCGAAATCAGTGCT.............................................................. 19 0 1 5.00 5 5 0 0 0
.................................................................................................................TAGCACCATTCGAAATGAGTG................................................................ 21 1 1 4.00 4 4 0 0 0
.................................................................................................................TAGCACAATTCGAAATCAGTGCA.............................................................. 23 2 1 4.00 4 4 0 0 0
..................................................................................................................AGCACCATTCGAAATCAGTGA............................................................... 21 1 1 4.00 4 4 0 0 0
.................................................................................................................TAGCTCCATTCGAAATCAGTGCT.............................................................. 23 1 1 4.00 4 4 0 0 0
.................................................................................................................TAGCACCACTCGAAATCAGT................................................................. 20 1 1 4.00 4 4 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAC.................................................................. 19 1 1 4.00 4 4 0 0 0
.................................................................................................................TAGCACCGTTCGAAATCAGT................................................................. 20 1 1 4.00 4 4 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGTGTTG............................................................. 24 2 1 4.00 4 4 0 0 0
.................................................................................................................TAGCACCATTCGAAATCTGT................................................................. 20 1 1 4.00 4 4 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGAGT............................................................... 22 2 1 4.00 4 4 0 0 0
.................................................................................................................TAGCACCTTTCGAAATCAGTGCT.............................................................. 23 1 1 4.00 4 4 0 0 0
.................................................................................................................TAGCACCACTCGAAATCAGTGT............................................................... 22 2 1 4.00 4 4 0 0 0
.................................................................................................................TAGTACCATTCGAAATCAG.................................................................. 19 1 1 4.00 4 4 0 0 0
.................................................................................................................TAGCACCACTCGAAATCAGTGA............................................................... 22 2 1 4.00 4 4 0 0 0
.................................................................................................................TAGCACAATTCGAAATCAGTGA............................................................... 22 2 1 4.00 4 4 0 0 0
.................................................................................................................TAGCACCATTCGACATCAGTG................................................................ 21 1 1 4.00 4 4 0 0 0
.....................................................................................................................ACCATTCGAAATCAGTGC............................................................... 18 0 1 4.00 4 4 0 0 0
.................................................................................................................GAGCACCATTCGAAATCAGTGC............................................................... 22 1 1 4.00 4 4 0 0 0
.................................................................................................................TAGCACCGTTCGAAATCAGTGT............................................................... 22 2 1 4.00 4 4 0 0 0
.................................................................................................................TAGCACCATTCCAAATCAGTGC............................................................... 22 1 1 4.00 4 4 0 0 0
.................................................................................................................TATCACCATTCGAAATCAGTGA............................................................... 22 2 1 4.00 4 4 0 0 0
.................................................................................................................TAGCACCATTCGAAATCACT................................................................. 20 1 1 4.00 4 4 0 0 0
.................................................................................................................TACCACCATTCGAAATCAGTGT............................................................... 22 2 1 4.00 4 4 0 0 0
.................................................................................................................TAGCACCATTCGAAATCTGTG................................................................ 21 1 1 4.00 4 4 0 0 0
.................................................................................................................TAGCACCATTCAAAATCAGTGT............................................................... 22 2 1 4.00 4 4 0 0 0
.................................................................................................................TAGCACCATGCGAAATCAGTG................................................................ 21 1 1 4.00 4 4 0 0 0
.................................................................................................................TAGCACCATTCGAAATTAGTGC............................................................... 22 1 1 4.00 4 4 0 0 0
.................................................................................................................TAGCACCATCCGAAATCAGTGT............................................................... 22 2 1 4.00 4 4 0 0 0
..............................................................ACTGAGATAGATTGGTGCATAGA................................................................................................................. 23 1 1 4.00 4 4 0 0 0
.................................................................................................................TAGCACCATTCGAAATTAGT................................................................. 20 1 1 4.00 4 4 0 0 0
.................................................................................................................TAGCACCATTCGAAATCATTGA............................................................... 22 2 1 4.00 4 4 0 0 0
................................................................TGAGATCGATTGGTGCAT.................................................................................................................... 18 0 1 4.00 4 4 0 0 0
.................................................................................................................AAGCACCATTCGAAATCAGTGT............................................................... 22 2 1 4.00 4 4 0 0 0
.................................................................................................................TAGCAAAATTCGAAATCAGTG................................................................ 21 2 1 4.00 4 4 0 0 0
.................................................................................................................TAGCACCAAACGAAATCAGTGCT.............................................................. 23 2 1 4.00 4 4 0 0 0
.................................................................................................................TAGCACTATTCGAAATCAGTGA............................................................... 22 2 1 4.00 4 4 0 0 0
.............................................................AACTGAGATCGATTGGTGCAA.................................................................................................................... 21 1 1 4.00 4 4 0 0 0
..............................................................ACTGAAATCGATTGGTGCATAGA................................................................................................................. 23 1 1 4.00 4 4 0 0 0
.................................................................................................................AAGCACCATTCGAAATCAGT................................................................. 20 1 1 4.00 4 4 0 0 0
...................................................................................................................GCACCATTCGAAATCAGTGC............................................................... 20 0 1 4.00 4 4 0 0 0
.................................................................................................................TAGCACCATTAGAAATCAGT................................................................. 20 1 1 4.00 4 4 0 0 0
.................................................................................................................TAGCACCATTGGAAATCAGTGC............................................................... 22 1 1 4.00 4 4 0 0 0
.................................................................................................................TAGCACCATTCGAAATCAGTGCTC............................................................. 24 1 1 4.00 4 4 0 0 0
.................................................................................................................GAGCACCATTCGAAATCAGT................................................................. 20 1 1 4.00 4 4 0 0 0
.................................................................................................................TAGCACCATTCGAAATTAGTGT............................................................... 22 2 1 4.00 4 4 0 0 0
.................................................................................................................TAGCATCATTCGAAATCAGT................................................................. 20 1 1 4.00 4 4 0 0 0
.................................................................................................................TAGCACCATTCGAAATCACTGA............................................................... 22 2 1 4.00 4 3 1 0 0
..................................................................................................................TACACCATTCGAAATCAGTGC............................................................... 21 2 2 3.50 7 7 0 0 0
.................................................................................................................TAGCACCATTCGAGATCAGT................................................................. 20 1 1 3.00 3 3 0 0 0
.................................................................................................................TAGCACGATTCGAAATCAGTG................................................................ 21 1 1 3.00 3 3 0 0 0
...............................................................CTGAGATCGATTGGTGCATA................................................................................................................... 20 0 1 3.00 3 3 0 0 0

Anti-sense strand reads

ACGTTTCCCAAGTCCTAGCCTTTGTCCTCGATGGTTGAACGGGTAGGTGAAGTTTAGCTTCTTGACTCTAGCTAACCACGTATCTATAGTCCTTTTGGGTGAGTTAAGTTGAGATCGTGGTAAGCTTTAGTCACGAAAACTATTCTTTGTTAGTCGCTTCACAGTTTAGCTTCGCTTGAAGTTTACACGACAATTTAT

*************************************************..(((..(((((((.(((((..((((.((((((.((((......((........))........)))))))))).))))..)))))..)))))))..)))..*********************************************** 		Read size # Mismatch Hit Count Total Norm Total M054

female body

 V115

head

 V113

male body		 V114

embryo
.......................................................AGCTTCTTGACTCTAGCTAACCA........................................................................................................................ 23 0 1 1.00 1 1 0 0 0
...........................................................................................................GTTGCGATCGTGGGAAGCAT....................................................................... 20 3 3 0.67 2 1 1 0 0
.............CCTAGCTTGTGTCCTGGATG..................................................................................................................................................................... 20 3 3 0.33 1 0 0 1 0
....................................................................................................GAGTTAAGTTGACATGTTGG.............................................................................. 20 3 6 0.17 1 0 1 0 0
.............CCTAGCTTGTGTCCTGGAT...................................................................................................................................................................... 19 3 10 0.10 1 0 1 0 0
...........................................................................................................GTTGCGATCGCGGGAAGC......................................................................... 18 3 20 0.10 2 2 0 0 0
.......................................AGGGTAGGTGAAGTTTTG............................................................................................................................................. 18 2 12 0.08 1 0 0 0 1
.............CCTAGCTTTTGTCCTGGAGG..................................................................................................................................................................... 20 3 12 0.08 1 1 0 0 0
.....................................AAGAGGTAGGTGAAGTTT............................................................................................................................................... 18 2 17 0.06 1 0 1 0 0
........................................................................................................................TAAGCATTAGTCGCGTAAAC.......................................................... 20 3 20 0.05 1 1 0 0 0
..............................................................................CTCATCTATACTCCTTTTG..................................................................................................... 19 3 20 0.05 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droSec2 scaffold_0:4127778-4127975 - dse-mir-285 Known_mirbase TGCAAAGGGTTCAGGATCGGA---------------------A--ACAGGAGCT----------------ACC------------AAC-TTG----------------------CCCATCCACTTCAAATCGAAGAACTGAGATCGATTGGTGCATAGATAT----CAGGAA-A-ACCCACTC---------AATTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCGAAGTGTC------------A-AATCGAAGCGAACTT-----------CAAATGTG-------CTGTTAAATA
droSim2 3l:11642944-11643141 - dsi-mir-285 Known_mirbase TCCAAAGGGTTCAGGATCGGA---------------------A--ACAGGAGCT----------------ACC------------AGC-TTG----------------------CCCAGCCACTTCGAATCGAAGAACTGAGATCGATTGGTGCATAGATAT----CAGGAA-A-ACCCACTC---------AATTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCGAAGTGTC------------A-AATCAAAGCGAACTT-----------CAAATGTG-------CTGTTAAATA
dm3 chr3L:11939144-11939341 - dme-mir-285 Known_mirbase TCCAAAGGGTTCAGGATCGGA---------------------A--ACAGGAGCT----------------ACC------------TAC-TTG----------------------CCCTGCCACTTCGAATCGAAGAACTGAGATCGATTGGTGCATAGATAT----CAGGAG-A-ACCCACTC---------AATTTAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCGAAGTGTC------------A-AATCGAAGCGAACTT-----------CAAATGTG-------CTGTTAAATA
droEre2 scaffold_4784:11929844-11930046 - der-mir-285 Known_mirbase TCCAAGGGGTGCAGGATCGGT---------------------A--GCAGGAGCT----------------ACC-TTCAGGAG-------CTG----------------------CACTCCCACTTCGAGTCGAAGAACTGAGATCGATTGGTGCATAGATAT----CAAGAA-G-CCCCACTC---------AATTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCGGAGTGTC------------A-AATCGGAGCGAACTT-----------CAAATGTG-------CTGTTGAATA
droYak3 3L:11984740-11984937 - dya-mir-285 Known_mirbase TCCAAAGGGTGCAGGATCGGA---------------------A--TCAGGAGCT----------------ACC------------TTC-TTG----------------------CCCTACCACTTCGAATCGAAGAACTGAGATCGATTGGTGCATAGATAT----CAAGAC-A-ACCCACTC---------AATTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCGAAGTGTC------------A-AATCGAAGCGAACTT-----------CACATGTG-------CTGTTAAATA
droEug1 scf7180000409466:4030499-4030674 - TCCAAAGGGTGCAGGATCGGA---------------------C----------------------------------------------------------------------------TCACTTCGAATCGAAGAACTGAGATCGATTGGTGCATAGATAT----CAAGGA-A-ACATACTC---------ATTTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCAGAGTGCC------------TTAATCGAAGTGATTTT-----------TAAGTGAA-------ACTTTAAATA
droBia1 scf7180000302428:4183349-4183545 - TCCAAAGGGTGCAGGATCGCA---------------------G--TGGGGAGCA-----------------C-------------------------------------------TCTTCCCCTTCGAATCGAAGAACTGAGATCGACTGGTGCATAGATAT----CAGGGA-A-AGCCACCC---------ATTTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAGCAATCAGCAGAGTGTC------------TCGCTCGGAGTGAATTT-----------CAACGCTGCCCCGCCTCTCCAACGA
droTak1 scf7180000415741:177968-178158 + TCCAAAGGGTGCAGGATCGAA---------------------A--TCTGGAGCA-----------------C-------------TGC-TCG----------------------C-------CTTCGAATCGAAGAACTGAGATCGATTGGTGCATAGATAT----CAAGGAAA-ACCCACTC---------ATTTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCAGAGTGTC------------TCAATCGAAGTGAACTC-----------CAGAAGTG-------TCTTCGGCGA
droEle1 scf7180000491193:3850517-3850703 - TTCAAAAGTGGCAGGATCGGA---------------------AAAAAAGGAGCT-----------------------------------------------------------------CTTCTTCGAATCGAAGAACTGAGCTCGATTGGTGCATAGATAT----CAAGGG-A-ACCCGCTC---------ATTTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAATCAATCAGCAGAGTGTC------------TTAATCGAAGTGAATTT-----------TTACTGTG-------CCTCTAAAGA
droRho1 scf7180000780179:29897-30094 + TCCAAAAGTGGCAGGATCGAA---------------------A--TCAGGAGCT-----------------CC------------ATC-CAC----------------------CCAGCACACTTCGAATCGAAGAACTGAGATCGATTGGTGCATAGATAT----CAAGGG-A-ACCCGCTC---------ATTTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAATCAATCAGCAGAGTGCC------------TTAATCGAAGTGAATTT-----------TAAATGAG-------CCTTCGAATA
droFic1 scf7180000454113:2711039-2711247 + CCCGAAATCGGCAGGATGGGT---------------------A--TCAAGAATC----------------AGG--------A--AT-C-CACACA--------------------G--AAGCCTTCGAATCGAAGAACTGAGATCGATTGGTGCATAGATATAC--CAAGGA-A-ACCCGCTC---------ATTTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCAGAGTGTC------------GCAAGCAAAGCCAACTTCAACTTCAAC-TGTGT----------CCCCAGAATA
droKik1 scf7180000302391:881224-881420 + CGG--------CAGGATCGCA-------GG------------A--T----------------------------TTGAGGGA--GTGCATAC----------------------CGAGGACAGTTCGAATCGAAGAACTGAGATCGATTGGTGCATAGATAT----CAAGGAGACACCCGCTT---------AT-TTAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAACCAATCAGCAGAGTGTC------------G-AAAAAATACAAACAT------TAAC-TGTGTGAA------CGTTTCAAGAA
droAna3 scaffold_13337:6191313-6191492 - dan-mir-285 Known_mirbase GGCAACAGGATCATCATTGAC---------------------A--GGA-----------------------TT------------AGC-TAG----------------------CCAGGATAATTCGAATCAAAGAACTGAGATCGATTGGTGCATAGATAT----CAAGGA-G-ATCCGATC---------ATTTCAATTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAACCACTCAACAGA----------------------TAAAGTG--TTT-----------TGTGTGTG-------TTTTTCAACA
droBip1 scf7180000396419:132602-132788 - G--------------ATTGGAACTACCAGGACCTACACTGACA--GGA-----------------------TT------------AGC-TAG----------------------CCAGGATAATTCGAATCAAAGAACTGAGATCGATTGGTGCATAGATAT----CAAGGA-G-ATCCGATC---------ATTTCAATTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAACCACTCAACCAA----------------------TAAAGTG--TTC-----------TGTGTGTG-------TTTTTCTACA
dp5 XR_group6:1929740-1929947 - dps-mir-285 Known_mirbase TCAG-CGCCGGCAGGA----G---------------------A--CCAGGAGCA----------------GCC-------------------GAGCAGCAGGACACTTCTTA--CAATTACAGTTCGAATCGAAGAACTGAGATCGATTGGTGCATAGATAT----CAAGAG-G-ACTCGCTAA--------TTTTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATGAGAACCATTCAACAGAAAGTG----------TTT-CTCCAAAGTGATTTT----------TTTTCAGTG-------C---ATGACA
droWil2 scf2_1100000004762:5768832-5769040 + dwi-mir-285 Known_mirbase TACACCTCAATGGGGATCCCT---------------------A--TG-----------------------ACA-TTAAGGAC--ATAC----GGACCACAT--------------ACAAATTGTTCGAATTAAAGAACTGAGATCGATTGGTGCATAGATAA----TATGCG-A-ATTCTATCATTTGATTTCATTCAATTCTAGCACCATTCGAAATCAGTGCTTTTGATTAGAACCAATCAACAAGAG------------------ATGGCATTAAATTA-----------CAATTGCT-------ACAGTAAATA
droVir3 scaffold_13049:21101378-21101563 + dvi-mir-285 Known_mirbase A---AGTGCTTCAATATATAT---------------------A--TATAT----ATATAGACTAATACGA--CACCC-----AACTA---TG-CA--------------------CCAGCCAGTTCAAATTGAAGAACTGAGATCGATTGGTGCATAGATATCGC--CCAAA-A-AGTAATTC---------ATTTCAATTCTAGCACCATTCGAAATCAGTGCTTTTTATTCGAACCGATCAGCGGCGCATC------------A-AAACAA---------------------------------------------
droMoj3 scaffold_6680:15475356-15475557 + dmo-mir-285 Known_mirbase TATTATG----------------------------------------------------------------CC------------ACA-CACCCA--GC---AGACATCAAACACCACACCAGTTCAAATTGAAGAACTGAGATCGATTGGTGCATAGATAACGC-CCAAAA-A-GTCATTTT---------ATTTCAATTCTAGCACCATTCGAAATCAGTGCTTTTTATTGGAACCGATCAACGGTGTATGGGAACAAGTGTCT-AA---CAGTGATCTA-----------TGAATATG-------TTGCGAAAGA
droGri2 scaffold_15110:22570067-22570259 - dgr-mir-285 Known_mirbase TACAATG----AAGGAGCAG-------------------------TCAATCACT----------------AAT--------AACCTAT----GTA--------------------GCAGCCAGTTCAAATTGAAGAACTGAGATCGATTGGTGCATAGATATCGTCCAAGA----ATAATTTA---------ATTTCAATTCTAGCACCATTCGAAATCAGTGCTTTGTATTGGAACCGATCAGCGGCGCATT------------A-GCACAAAGTG--TTT-----------CAAGTGAT-------TTATCA--AA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSec2
TGCAAAGGGTTCAGGATCGGA---------------------A--ACAGGAGCT----------------ACC------------AAC-TTG----------------------CCCATCCACTTCAAATCGAAGAACTGAGATCGATTGGTGCATAGATAT----CAGGAA-A-ACCCACTC---------AATTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCGAAGTGTC------------A-AATCGAAGCGAACTT-----------CAAATGTG-------CTGTTAAATASizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTG...............................................................................................21136390.003639058264836258
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCT.............................................................................................23130965.003096562663730800
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGC..............................................................................................22114280.001428093332914125
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGT................................................................................................2017051.00705174586991
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGT..............................................................................................2213508.003508122523469
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAG.................................................................................................1912366.0023661232360
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGA..............................................................................................2212154.0021541012152
........................................................................................................................................ACTGAGATCGATTGGTGCATAGA...............................................................................................................................................................2311575.00157545281511
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCA.............................................................................................231437.00437100436
........................................................................................................................................ACTGAGATCGATTGGTGCAT..................................................................................................................................................................201358.00358150352
........................................................................................................................................ACTGAGATCGATTGGTGCATAG................................................................................................................................................................221256.00256350248
.......................................................................................................................................AACTGAGATCGATTGGTGCAT..................................................................................................................................................................211191.00191050186
..........................................................................................................................................................................................................TAGCACCATTCGAAATCA..................................................................................................181148.00148000148
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTT...............................................................................................211135.00135020133
.............................................................................................................................................................................................................CACCATTCGAAATCAGTG...............................................................................................181131.00131000131
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTA...............................................................................................211115.00115000115
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGA................................................................................................201115.00115000115
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGAA.............................................................................................231109.00109000109
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGTA.............................................................................................231109.00109000109
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCTT............................................................................................24186.008610085
.......................................................................................................................................AACTGAGATCGATTGGTGCATAGA...............................................................................................................................................................24185.008501084
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCC.............................................................................................23180.008010079
........................................................................................................................................ACTGAGATCGATTGGTGCATA.................................................................................................................................................................21171.007110169
.........................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTG...............................................................................................22168.006800068
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGG..............................................................................................22149.004900049
.......................................................................................................................................AACTGAGATCGATTGGTGCATAG................................................................................................................................................................23145.004500045
.........................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTGCT.............................................................................................24144.004400044
...........................................................................................................................................................................................................AGCACCATTCGAAATCAGTG...............................................................................................20140.004040036
........................................................................................................................................ACTGAGATCGATTGGTGCA...................................................................................................................................................................19140.004000040
........................................................................................................................................ACTGAGATCGATTGGTGCATAGAA..............................................................................................................................................................24136.003601035
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAA.................................................................................................19133.003300033
...........................................................................................................................................................................................................AGCACCATTCGAAATCAGTGCT.............................................................................................22133.003340029
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTC...............................................................................................21133.003300033
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTTT..............................................................................................22127.002711025
.........................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTGC..............................................................................................23126.002620024
..........................................................................................................................................TGAGATCGATTGGTGCATAGA...............................................................................................................................................................21124.002421021
.........................................................................................................................................CTGAGATCGATTGGTGCATAGA...............................................................................................................................................................22122.002211020
........................................................................................................................................ACTGAGATCGATTGGTGCATAGT...............................................................................................................................................................23121.002100021
..........................................................................................................................................TGAGATCGATTGGTGCATAGAT..............................................................................................................................................................22120.002000020
...........................................................................................................................................................................................................AGCACCATTCGAAATCAGTGC..............................................................................................21118.001850013
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGC................................................................................................20118.001800018
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTAA..............................................................................................22116.001600016
.........................................................................................................................................CTGAGATCGATTGGTGCATAG................................................................................................................................................................21115.001500015
.............................................................................................................................................................................................................CACCATTCGAAATCAGTGC..............................................................................................19113.001300013
..........................................................................................................................................TGAGATCGATTGGTGCATAG................................................................................................................................................................20113.001300013
.........................................................................................................................................................................................................CTAGCACCATTCGAAATCAG.................................................................................................20113.001300013
............................................................................................................................................................................................................GCACCATTCGAAATCAGTGCT.............................................................................................21112.001200012
.........................................................................................................................................................................................................CTAGCACCATTCGAAATCAGT................................................................................................21111.001100011
.......................................................................................................................................AACTGAGATCGATTGGTGCATA.................................................................................................................................................................22110.001000010
............................................................................................................................................................................................................GCACCATTCGAAATCAGTG...............................................................................................19110.001000010
...............................................................................................................................................................TAT----CAGGAA-A-ACCCACTC---------AATT..........................................................................................................................2219.0090009
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAT.................................................................................................1918.0080008
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTTA..............................................................................................2218.0080008
........................................................................................................................................ACTGAGATCGATTGGTGCATAGAT..............................................................................................................................................................2418.0080107
.........................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTGA..............................................................................................2317.0070007
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGAAA............................................................................................2417.0070007
...........................................................................................................................................................................................................AGCACCATTCGAAATCAGT................................................................................................1917.0071006
.............................................................................................................................................................................................................CACCATTCGAAATCAGTGCT.............................................................................................2017.0071006
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCG.............................................................................................2317.0071006
.........................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTGT..............................................................................................2317.0070007
...............................................................................................................................................................TAT----CAGGAA-A-ACCCACTC---------AAT...........................................................................................................................2116.0060006
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCTTT...........................................................................................2516.0061005
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGGA.............................................................................................2315.0050005
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGAA...............................................................................................2115.0050005
.......................................................................................................................................AACTGAGATCGATTGGTGCA...................................................................................................................................................................2015.0050005
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCTA............................................................................................2415.0050005
...............................................................................................................................................................TAT----CAGGAA-A-ACCCACTC---------AATTCA........................................................................................................................2415.0050005
...............................................................................................................................................................TAT----CAGGAA-A-ACCCACTC---------AATTCAACT.....................................................................................................................2715.0051004
..............................................................................................................................................................................................................ACCATTCGAAATCAGTGCT.............................................................................................1915.0050005
...........................................................................................................................................................................................................AGCACCATTCGAAATCAGTGA..............................................................................................2114.0040004
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAC.................................................................................................1914.0040004
..............................................................................................................................................................................................................ACCATTCGAAATCAGTGC..............................................................................................1814.0040004
..........................................................................................................................................TGAGATCGATTGGTGCAT..................................................................................................................................................................1814.0040004
.......................................................................................................................................AACTGAGATCGATTGGTGCAA..................................................................................................................................................................2114.0040004
............................................................................................................................................................................................................GCACCATTCGAAATCAGTGC..............................................................................................2014.0040004
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCTC............................................................................................2414.0040004
.........................................................................................................................................CTGAGATCGATTGGTGCATA.................................................................................................................................................................2013.0030003
droSim2
TCCAAAGGGTTCAGGATCGGA---------------------A--ACAGGAGCT----------------ACC------------AGC-TTG----------------------CCCAGCCACTTCGAATCGAAGAACTGAGATCGATTGGTGCATAGATAT----CAGGAA-A-ACCCACTC---------AATTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCGAAGTGTC------------A-AATCAAAGCGAACTT-----------CAAATGTG-------CTGTTAAATASizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
........................................................................................................................................ACTGAGATCGATTGGTGCATAGA...............................................................................................................................................................23150607.0050607500721691630618833000201000
........................................................................................................................................ACTGAGATCGATTGGTGCAT..................................................................................................................................................................20110325.0010325101981819038600000000010
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGC..............................................................................................2219544.00954419282714164742210002400000
.......................................................................................................................................AACTGAGATCGATTGGTGCAT..................................................................................................................................................................2117092.00709270082216014500000000000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTG...............................................................................................2116995.0069951147141288574000000300000
........................................................................................................................................ACTGAGATCGATTGGTGCATAG................................................................................................................................................................2215884.005884554318200529500000000003
..........................................................................................................................................................................................................TAGCACCATTCGAAATCA..................................................................................................1815734.0057347000118560900000000000
........................................................................................................................................ACTGAGATCGATTGGTGCATAGG...............................................................................................................................................................2315087.0050875044142900000000000000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAG.................................................................................................1915072.00507274001107489000000000000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGT................................................................................................2013730.0037307500166358700000100000
.......................................................................................................................................AACTGAGATCGATTGGTGCATAGA...............................................................................................................................................................2412100.002100206865012000000000000
........................................................................................................................................ACTGAGATCGATTGGTGCATA.................................................................................................................................................................2111971.0019711861410039000000000102
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCT.............................................................................................2311239.001239207011218980000018201000
........................................................................................................................................ACTGAGATCGATTGGTGCA...................................................................................................................................................................1911066.001066866320319100001000000
.......................................................................................................................................AACTGAGATCGATTGGTGCATAG................................................................................................................................................................2311034.00103496027026201000000000
........................................................................................................................................ACTGAGATCGATTGGTGCATAGT...............................................................................................................................................................231817.008178133100000000000000
........................................................................................................................................ACTGAGATCGATTGGTGCATAGAA..............................................................................................................................................................241746.007467450100000000000000
........................................................................................................................................ACTGAGATCGATTGGTGCAC..................................................................................................................................................................201554.005545513000000000000000
........................................................................................................................................ACTGAGATCGATTGGTGCATAGC...............................................................................................................................................................231498.004984971000000000000000
.........................................................................................................................................CTGAGATCGATTGGTGCATAGA...............................................................................................................................................................221467.004674581100700000000000
.......................................................................................................................................AACTGAGATCGATTGGTGCAC..................................................................................................................................................................211370.003703700000000000000000
.......................................................................................................................................AACTGAGATCGATTGGTGCATA.................................................................................................................................................................221361.0036133624001900000000000
........................................................................................................................................ACTGAGATCGATTGGTGCATT.................................................................................................................................................................211352.003523520000000000000000
.........................................................................................................................................CTGAGATCGATTGGTGCATAG................................................................................................................................................................211345.0034528651015200000000000
.......................................................................................................................................AACTGAGATCGATTGGTGCATT.................................................................................................................................................................221322.003223210100000000000000
.......................................................................................................................................AACTGAGATCGATTGGTGCATAGG...............................................................................................................................................................241203.002032021000000000000000
.......................................................................................................................................AACTGAGATCGATTGGTGCA...................................................................................................................................................................201188.0018816500012200000000000
........................................................................................................................................ACTGAGATCGATTGGTGCATAGAT..............................................................................................................................................................241156.001561530000300000000000
........................................................................................................................................ACTGAGATCGATTGGTGCATAA................................................................................................................................................................221142.001421420000000000000000
........................................................................................................................................ACTGAGATCGATTGGTGC....................................................................................................................................................................181136.001367100026300000000000
.......................................................................................................................................AACTGAGATCGATTGGTGCATTT................................................................................................................................................................231109.001091090000000000000000
........................................................................................................................................ACTGAGATCGATTGGTGCAG..................................................................................................................................................................20195.0095950000000000000000
.......................................................................................................................................AACTGAGATCGATTGGTGCATAGT...............................................................................................................................................................24186.0086860000000000000000
........................................................................................................................................ACTGAGATCGATTGGTGCATAT................................................................................................................................................................22184.0084840000000000000000
.......................................................................................................................................AACTGAGATCGATTGGTGCAG..................................................................................................................................................................21169.0069690000000000000000
.........................................................................................................................................CTGAGATCGATTGGTGCATAGG...............................................................................................................................................................22155.0055550000000000000000
.......................................................................................................................................AACTGAGATCGATTGGTGCATAT................................................................................................................................................................23155.0055550000000000000000
.......................................................................................................................................AACTGAGATCGATTGGTGC....................................................................................................................................................................19152.0052443001400000000000
.............................................................................................................................................................................................................CACCATTCGAAATCAGTGCT.............................................................................................20152.0052491000200000000000
........................................................................................................................................ACTGAGATCGATTGGTGCATTT................................................................................................................................................................22149.0049490000000000000000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGA..............................................................................................22143.0043410020000000000000
.........................................................................................................................................CTGAGATCGATTGGTGCAT..................................................................................................................................................................19142.0042370000500000000000
.........................................................................................................................................CTGAGATCGATTGGTGCATAGT...............................................................................................................................................................22141.0041410000000000000000
.........................................................................................................................................CTGAGATCGATTGGTGCA...................................................................................................................................................................18140.00402800001200000000000
...........................................................................................................................................................................................................AGCACCATTCGAAATCAGTGC..............................................................................................21139.0039200223300000000000
........................................................................................................................................ACTGAGATCGATTGGTGCAA..................................................................................................................................................................20139.0039380100000000000000
.......................................................................................................................................AACTGAGATCGATTGGTGCATAGAA..............................................................................................................................................................25137.0037370000000000000000
.......................................................................................................................................AACTGAGATCGATTGGTGCATAA................................................................................................................................................................23136.0036351000000000000000
........................................................................................................................................ACTGAGATCGATTGGTGCG...................................................................................................................................................................19135.0035340100000000000000
...........................................................................................................................................................................................................AGCACCATTCGAAATCAG.................................................................................................18134.0034000003400000000000
.......................................................................................................................................AACTGAGATCGATTGGTGCAA..................................................................................................................................................................21132.0032320000000000000000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGT..............................................................................................22131.0031290020000000000000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCTT............................................................................................24130.0030000032700000000000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGG..............................................................................................22129.0029290000000000000000
........................................................................................................................................ACTGAGATCGATTGGTGT....................................................................................................................................................................18128.0028280000000000000000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCC.............................................................................................23127.0027270000000000000000
.......................................................................................................................................AACTGAGATCGATTGGTGCATAGC...............................................................................................................................................................24125.0025250000000000000000
.......................................................................................................................................AACTGAGATCGATTGGTG.....................................................................................................................................................................18124.0024200002200000000000
...........................................................................................................................................................................................................AGCACCATTCGAAATCAGTG...............................................................................................20122.0022100002100000000000
........................................................................................................................................ACTGAGATCGATTGGTGCATAC................................................................................................................................................................22122.0022220000000000000000
.......................................................................................................................................AACTGAGATCGATTGGTGCATTTT...............................................................................................................................................................24121.0021210000000000000000
.............................................................................................................................................................................................................CACCATTCGAAATCAGTG...............................................................................................18121.0021210000000000000000
........................................................................................................................................ACTGAGATCGATTGGTGCATAGATA.............................................................................................................................................................25120.0020180000200000000000
..........................................................................................................................................TGAGATCGATTGGTGCATAGA...............................................................................................................................................................21120.0020170000300000000000
...............................................................................................................................................................TAT----CAGGAA-A-ACCCACTC---------AATTCAACTC....................................................................................................................28120.0020180100100000000000
.......................................................................................................................................AACTGAGATCGATTGGTGCATAGAT..............................................................................................................................................................25120.0020190100000000000000
..........................................................................................................................................TGAGATCGATTGGTGCAT..................................................................................................................................................................18119.0019170000200000000000
..........................................................................................................................................TGAGATCGATTGGTGCATAGAT..............................................................................................................................................................22119.0019130000600000000000
.........................................................................................................................................CTGAGATCGATTGGTGCATAGAT..............................................................................................................................................................23118.0018170000100000000000
.........................................................................................................................................CTGAGATCGATTGGTGCATA.................................................................................................................................................................20118.0018100000800000000000
........................................................................................................................................ACTGAGATCGATTGGTGCATAGAC..............................................................................................................................................................24117.0017170000000000000000
..............................................................................................................................................................................................................ACCATTCGAAATCAGTGC..............................................................................................18116.0016150000000001000000
...............................................................................................................................................................................................................CCATTCGAAATCAGTGCT.............................................................................................18116.0016150100000000000000
...........................................................................................................................................................................................................AGCACCATTCGAAATCAGT................................................................................................19115.0015000021300000000000
.............................................................................................................................................................................................................CACCATTCGAAATCAGTGC..............................................................................................19113.0013120000100000000000
........................................................................................................................................ACTGAGATCGATTGGTGCATAGAAT.............................................................................................................................................................25113.0013130000000000000000
..........................................................................................................................................TGAGATCGATTGGTGCATAG................................................................................................................................................................20112.001270300200000000000
.........................................................................................................................................CTGAGATCGATTGGTGCATT.................................................................................................................................................................20112.0012120000000000000000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGAC.............................................................................................23111.0011110000000000000000
.......................................................................................................................................AACTGAGATCGATTGGTGCATC.................................................................................................................................................................22110.0010100000000000000000
..............................................................................................................................................................................................................ACCATTCGAAATCAGTGCT.............................................................................................1919.00960000300000000000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGG................................................................................................2019.00990000000000000000
...............................................................................................................................................................TAT----CAGGAA-A-ACCCACTC---------AATTCAACT.....................................................................................................................2719.00990000000000000000
........................................................................................................................................ACTGAGATCGATTGGTGCATAGATAT----........................................................................................................................................................2618.00880000000000000000
........................................................................................................................................ACTGAGATCGATTGGTGCATC.................................................................................................................................................................2118.00880000000000000000
........................................................................................................................................ACTGAGATCGATTGGTGCATAGATAT----C.......................................................................................................................................................2717.00770000000000000000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGC................................................................................................2017.00770000000000000000
.............................................................................................................................................................................................................CACCATTCGAAATCAGTGCC.............................................................................................2017.00770000000000000000
...........................................................................................................................................................................................................AGCACCATTCGAAATCAGTGCT.............................................................................................2217.00700001600000000000
........................................................................................................................................ACTGAGATCGATTGGTGCATG.................................................................................................................................................................2116.00660000000000000000
.......................................................................................................................................AACTGAGATCGATTGGTGT....................................................................................................................................................................1916.00660000000000000000
...............................................................................................................................................................TAT----CAGGAA-A-ACCCACTC---------AA............................................................................................................................2016.00600000600000000000
.......................................................................................................................................AACTGAGATCGATTGGTGCATAC................................................................................................................................................................2316.00660000000000000000
.........................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTGC..............................................................................................2316.00660000000000000000
........................................................................................................................................ACTGAGATCGATTGGTGCATATT...............................................................................................................................................................2316.00660000000000000000
........................................................................................................................................ACTGAGATCGATTGGTGCATAGAG..............................................................................................................................................................2416.00660000000000000000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCG.............................................................................................2316.00660000000000000000
........................................................................................................................................ACTGAGATCGATTGGTGCATAGAAC.............................................................................................................................................................2515.00550000000000000000
...............................................................................................................................................................TAT----CAGGAA-A-ACCCACTC---------..............................................................................................................................1815.00530000200000000000
........................................................................................................................................ACTGAGATCGATTGGTGCATAGAAG.............................................................................................................................................................2515.00550000000000000000
.......................................................................................................................................AACTGAGATCGATTGGTGG....................................................................................................................................................................1915.00550000000000000000
.......................................................................................................................................AACTGAGATCGATTGGTGA....................................................................................................................................................................1915.00550000000000000000
.........................................................................................................................................CTGAGATCGATTGGTGCATAGC...............................................................................................................................................................2215.00550000000000000000
........................................................................................................................................ACTGAGATCGATTGGTGCATAGATT.............................................................................................................................................................2514.00440000000000000000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTA...............................................................................................2114.00440000000000000000
........................................................................................................................................ACTGAGATCGATTGGTGCATAGTA..............................................................................................................................................................2414.00440000000000000000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAA.................................................................................................1914.00440000000000000000
...............................................................................................................................................................TAT----CAGGAA-A-ACCCACTC---------AAT...........................................................................................................................2114.00400000400000000000
........................................................................................................................................ACTGAGATCGATTGGTGCATTTT...............................................................................................................................................................2323.50770000000000000000
...............................................................................................................................................................TAT----CAGGAA-A-ACCCACTC---------AATTCA........................................................................................................................2413.00310000200000000000
.......................................................................................................................................AACTGAGATCGATTGGTGCATAGTA..............................................................................................................................................................2513.00330000000000000000
............................................................................................................................................................................................................GCACCATTCGAAATCAGT................................................................................................1813.00310000200000000000
...............................................................................................................................................................................................................CCATTCGAAATCAGTGCC.............................................................................................1813.00330000000000000000
...............................................................................................................................................................TAT----CAGGAA-A-ACCCACTC---------AATTC.........................................................................................................................2313.00310000200000000000
.......................................................................................................................................AACTGAGATCGATTGGTGCT...................................................................................................................................................................2013.00330000000000000000
..........................................................................................................................................TGAGATCGATTGGTGCATA.................................................................................................................................................................1913.00310000200000000000
............................................................................................................................................................................................................GCACCATTCGAAATCAGTGCT.............................................................................................2113.00310000200000000000
........................................................................................................................................ACTGAGATCGATTGGTGCAAT.................................................................................................................................................................2113.00330000000000000000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGAA.............................................................................................2313.00330000000000000000
dm3
TCCAAAGGGTTCAGGATCGGA---------------------A--ACAGGAGCT----------------ACC------------TAC-TTG----------------------CCCTGCCACTTCGAATCGAAGAACTGAGATCGATTGGTGCATAGATAT----CAGGAG-A-ACCCACTC---------AATTTAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCGAAGTGTC------------A-AATCGAAGCGAACTT-----------CAAATGTG-------CTGTTAAATASizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCT.............................................................................................231176657.001766570000199311002230602626013915600000081929863162315710400000000001000000000002041631800000000000000000353726233964540462002190171223621525166412402309116826266096511222498099547991889142024611115021730071839945521000000000000000010001000000000000001317901684010161299853456953339349361110415500000262101000003020000002100000000012213000000000000010021023342861140068952014349000001181000001000110000000000001000112650290666590970030360116011301818062262200002100000000003194403116101000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGC..............................................................................................22190304.0090304000079330000118012381452715216000000407588308334425611621000000001000000000000068750453000000000000000002018251112270031000135620574472485415820568814311610122121400002497626103279346507309128223660651093625000000000000000000001000000000000030240435410206312481144229683483657101240211033849441005004117110000000100000000000000000015001310011000010000101013307860097412169240300000101700000000000000000000000000073287385331993937132431100202002070112790000000000000010287631111200010
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTG...............................................................................................21187090.0087090000014620000000039189251685000000110212211856231119564242100000000000000000000018514270000000000000000000202412010000000483311349510004422853001710340100712191311355019114948613395456083540000000000000000000000000000000000201334144407224982388842212945246923811558359141380000025970000000000000000000000000000001001000000000000010017839351040120187712789131229000114322000000000000000000000000000164988542258327419201527920000014901216000000000000000003769741110000020
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGT..............................................................................................22139050.00390500000590000000009240113000000700000000000000000000000000000000000000000000000000000010820000000203493029039101510811007000301008115721706742169732957588391156610000000000000000010000000000000100000159319000142325192461256110122731139534719199400100784200000000100000000000000000001000000000000011001003580027000994360490000033000000000000000000000000001010227827542374329524833582010001782055352300000010000001009505751201200010
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGT................................................................................................20129839.0029839000026000000000220552000000703720811342338337390000000000000000000000115000000000000000000000088000000001112430172760001862100201020010663275051707929634196121447236000000000000000000000000000000000000533902032877462104511424632386442495878150000647000000000000000000000000000000000000000000000000003870228000667910500000119700000000000000000000000000011234620802355347910162128000010734058738300002000000000004589954100000000
........................................................................................................................................ACTGAGATCGATTGGTGCATAGA...............................................................................................................................................................23112128.0012128000017000002000000060000000053139010801000000000000000000000031200000000000000000000003430000000143731102692610192246110040000000000881611102712822130715000000000010000000000000000000000000249261017475221191310061724621925010006200000000000000000000000000001400100010000001100130239440006810814600000658000000000000000000000000000310299606781048726203262503001820237261000011010100000032262859464136100000
........................................................................................................................................ACTGAGATCGATTGGTGCAT..................................................................................................................................................................2015796.00579600005000000000000010000001010415433810000000000000000000000035000000000000000000000013000000000015009313000013500000000000001203010537091814000000000001000000000000000000000000134166059121123451648580696790000095000000000000000000000000000000000000000000000000007852000319107000003060000000000000000000000000001400343358558002724100000107019014300000010010000000180402123300000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGA..............................................................................................2215751.005751000049100000000110000000000000000000000000000000000000000000000000000000000000000200000000002700300000001000001000000000183330190331946579101867100000000000000000000000000000000000023532301855475218162038275492561900000199000000000000000000000000000001000000000000082000006141101011299015000004300000000000000000000000000023823225127530011710000045017170000100000000000028301200000000
........................................................................................................................................ACTGAGATCGATTGGTGCATAG................................................................................................................................................................2215588.00558800001300000100011045000000016102135450100000000000000000000001711100000000000000000000032000000004160509620109134101001000000000040811081806012000000000000000000000000000000000000130164010114816492341109625017198000003600000000000000000000000000000000100010000000000000736000014450130000064000000000000000000000000000535346728149900250150130000670898700000000000000003104827021100000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAG.................................................................................................1914446.0044460000000000000050000000000004112686731200000000000000000000002910000000000000000000004000000000016002700000036000000000100016341108340571115387000000000000000000000000000000000000147327069106499126941120059111300000014500000000000000000000000000000000000000000000000000613120005185070000014000000000000000000000000000234422837970000570000005401390000000000000000028101010000000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCA.............................................................................................2313888.0038880000900000000007001600000000000000000000000000000000000000000000000000000000000006500000000202242026813001510662005505300009274903161507512956300000000000000000000000000000000000020924901210056811711139114310000015100000000000000000000000000000000000000000003100000533000083502000001100000000000000000000000000006912810112600210000003023000000000000000001500000000000
........................................................................................................................................ACTGAGATCGATTGGTGCATA.................................................................................................................................................................2112249.0022490000500000000000001000000001617598143100000000000000000000001000000000000000000002008000000001017305810001396100100000000031224080352213023000000000010000000000000000000000000532603741193156782136116473900000800000000000000000000000000000000000000000000000000560000716030000068000000000000000000000000000018118715321410443611000010024330000000000010000030297000000000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCTT............................................................................................2412041.00204100004100000000080041000000200201620100000000000000000000000403180000000000000000000005720000000001690060335000666402011031100004081000100012111900000000000000000000000000000000000016180120022211162241275000004000000000000000000000000000000000000000000000000000080000011010000020000000000000000000000000000111117170010000000201000000000000000000600000000000
.......................................................................................................................................AACTGAGATCGATTGGTGCAT..................................................................................................................................................................2111779.001779000020000000000000000000030000000000000000000000000000000220000000000000000000001000000000051022000000760000000000000062000116030120000000000000000000000000000000000004443021009120150190320000002200000000000000000000000000000000000000000000000000240100010230300000130000000000000000000000000000012613910512900234000000540103700000000000000000046220000000000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCC.............................................................................................2311279.00127900004700000001080012000000000000000000000000000000000000000000000000000000000221026001000000012120112310020420000000011001101720000220242218000000000000000000000000000000000000242601300102952112363800000031000000000000000000000000000000000000000000000000002170000110030000020000000000010000000000000000294531570032000000802000000000000000000500000000000
........................................................................................................................................ACTGAGATCGATTGGTGCATAGAATC----........................................................................................................................................................2611100.0011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000764336000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................GCACCATTCGAAATCAGTGCT.............................................................................................211898.008980000000000000000003300000000000000000000000000000000000000000000000000000000000002000000000208400122020040592000000000000000000000001001000000000000000000000000000000000000210400160201000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000042370000000000000000000000000000000100000000000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGTA.............................................................................................231772.0077200007000000000100000000000000000000000000000000000000000000000000000000000000000600000000001300800000020000000000000008503053190502114000000000000000000000000000000000000283603201627319027111810000012000000000000000000000000000000000000000000000000000230000313000000016000000000000000000000000000146335271001030000001508130000000000000000010600000000000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCTA............................................................................................241632.0063200008000000000000000000000000000000000000000000000000000000000000000000000000000190000000001500114000001023500020000010130000000000304400000000000000000000000000000000000013110200438037190300000027000000000000000000000000000000000000000000022000000100000200000001000000000000000000000000000011130000000000000000000000000000000000000000000
...........................................................................................................................................................................................................AGCACCATTCGAAATCAGTGC..............................................................................................211603.00603000010000000000300000000000210000000000000000000000000000100000000000000000000004000000000030010000012100000000000000580608713021110000000000000000000000000000000000004655033421857541151249560000042000000000000000000000000000000000000000000000000000400000202000001000000000000000000000000000058450001000000000000000000000000000100000000000
...........................................................................................................................................................................................................AGCACCATTCGAAATCAGTGCT.............................................................................................221568.005680000200000000000000000000000005046100000000000000000000000000000000000000000000000300000000102001500001070000000100000005000000003013000000000000000000000000000000000000422702000145005302503300000039000000000000000000000000000000000000000000000000000600002101000002000000000000000000000000000061210150010000000002000000000000000000300000000000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCA..................................................................................................181534.005340000000000000000000000000004202915620000000000000000000000010000000000000000000000200000000002007000000600000000000000710000000133117170000000000000000000000000000000000003690944817292041324100000130000000000000000000000000000000000000000000000000015000002000000000000000000000000000000000000111347370001010000300100000000000000000500000000000
.......................................................................................................................................AACTGAGATCGATTGGTGCATAG................................................................................................................................................................231517.005170000300000000000000000000000000000000000000000000000000071000000000000000000000000000000010100130000001800000000000000300001010000100000000000000000000000000000000000097019002301050153000002000000000000000000000000000000000000000000000000000500002202000007000000000000000000000000000033833159003422000000401012000000000000000009500000000000
.......................................................................................................................................AACTGAGATCGATTGGTGCATAGA...............................................................................................................................................................241505.0050500001000000000000000000000000000000000000000000000000000100000000000000000000000000000000001102000000110000000000000041010102000010000000000000000000000000000000000004120110032050901320000030000000000000000000000000000000000000000000000000007000015020000090000000000000000000000000000404633680037110000002010110000000000000000212900100000000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTT...............................................................................................211475.004750000100000000010000000000000000000000000000000000000000000000000000000000000000000000000000100400000000000000000000061000211018019140000000000000000000000000000000000001319061029112311370000007000000000000000000000000000000000000000000000000002500009790500000700000000000000000000000000004423193900000000001010000000000000000007800000000000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGG..............................................................................................221450.004500000000000000001000000000000000000000000000000000000000000000000000000000000000024000000000044000000000150000000000000151040006020750000000000000000000000000000000000001218061121407047956200000800000000000000000000000000000000000000000000000000140000213000000010000000000000000000000000000292824800350000007013000000000000000002300000000000
........................................................................................................................................ACTGAGATCGATTGGTGCATAGATC.............................................................................................................................................................251418.004180000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000282136000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................AGCACCATTCGAAATCAGTG...............................................................................................201392.00392000020000000000000200000000321219292000000000000000000000000000000000000000000000001000000000010030000008000000000000011103011400000000000000000000000000000000000000000122208737341322316163310000025000000000000000000000000000000000000000000000000000300005901000008000000000000000000000000000041112110010000000000000000000000000000900000000000
........................................................................................................................................ACTGAGATCGATTGGTGCA...................................................................................................................................................................191323.00323000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000030000002000000000000000000030002000000000000000000000000000000000000000115503000223039530000000000000000000000000000000000000000000000000000000012100041201000003500000000000000000000000000001111122100311000003073000000000000000008610000000000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTA...............................................................................................211313.0031300008000000000500000000000000000000000000000000000000000000000000000000000000000100000000003004000000110000001000000020010112040320000000000000000000000000000000000008300514310351112300000019000000000000000000000000000000000000000000000000000700004170200000100000000000000000000000000001719203600010000003021000000000000000002900000000000
.............................................................................................................................................................................................................CACCATTCGAAATCAGTG...............................................................................................181282.002820000000000000000001000000002100000000000000000000000000000000000000000000000000000000000000000300000017000000000000001100010100011000000000000000000000000000000000000715054223119301308000000130000000000000000000000000000000000000000000000000017000024010000080000000000000000000000000000191518310000000000000000000000000000000600000000000
........................................................................................................................................ACTGAGATCGATTGGTGCATAGAA..............................................................................................................................................................241259.0025900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003002000001260000000000000032000001000000000000000000000000000000000000000009700000205131200000000000000000000000000000000000000000000000000000000001100024000000019000000000000000000000000000015171815001180000003032000000000001000016712000000000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCG.............................................................................................231257.00257000070000000000000000000000000000000000000000000000000000000000000000000000000000000000000030014000000450000000001101100000000040210000000000000000000000000000000000001350700313010161201000009000000000000000000000000000000000000000000000000000000001300000001000000000000000000000000000022223320000000000000200000000000000000200000000000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGG................................................................................................201254.0025400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000200000100018200000000000000000000000000000000000061102007702345142670000021000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000019222900010000000604200000000000000000200000000000
.........................................................................................................................................CTGAGATCGATTGGTGCATAG................................................................................................................................................................211246.002460000100000000000001000000001000000000000000000000000000040000000000000000000000060000000010500140000004000000000000000000000000001000000000000000000000000000000000000012103510170174000000000000000000000000000000000000000000000000000000000000100000101000000000000000000000000000000000015910700300000000020000000000000000003600000000000
............................................................................................................................................................................................................GCACCATTCGAAATCAGTGC..............................................................................................201245.002450000000000000000003000000000000000000000000000000000000010000000000000000000000070000000010150031200010158000000000000000000000001010000000000000000000000000000000000000230100160203030000001000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000010000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................AGCACCATTCGAAATCAGTGT..............................................................................................211237.002370000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201000020000000000000040010312010020000000000000000000000000000000000002126015003180150216520000009000000000000000000000000000000000000000000000000000000001100000004000000000000000000000000000051350010000000002000000000000000000800000000000
.........................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTG...............................................................................................221234.00234000000000000000000000000000219171101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004202022131018111000000030000000000000000000000000000000000000000000000000004100093305000001900000000000000000000000000001379240000000000000000000000000000001900000000000
.........................................................................................................................................CTGAGATCGATTGGTGCATAGA...............................................................................................................................................................221226.002260000100000000000000000000002017121000000000000000000000000000000000000000000000001000000000050050100001200000000000000100003000101100000000000000000000000000000000000011507331217104723000002000000000000000000000000000000000000000000010000000000002000000001100000000000000000000000000004810700820000004063000000000000000003311101000000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGAA.............................................................................................231212.002120000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000013000000000000004101000001083000000000000000000000000000000000000151804000731009080000004000000000000000000000000000000000000000000001000000300001110000000100000000000000000000000000001113102300000000001011000000000000000002300000000000
.........................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTGC..............................................................................................231200.00200000000000000000000000000000100000000000000000000000000000100000000000000000000000000000000000000000001000000000000001000001301010000000000000000000000000000000000000101206111028019061140000001600000000000000000000000000000000000000000000000000060000390400000100000000000000000000000000007128130000000000100000000000000000000200000000000
........................................................................................................................................ACTGAGATCGATTGGTGCATAGT...............................................................................................................................................................231199.0019900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006006000000400000000000000000000000000000000000000000000000000000000000000041010001120020400000050000000000000000000000000000000000000000000000000003100012010000060000000000000000000000000000111351700530000002044000000000000000007401000000000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTTT..............................................................................................222167.50335000010000000000000000000000000000000000000000000000000000000000000000000000000001000000000000030000007000000000000006101024701113117000000000000000000000000000000000000232001502210713161213000000500000000000000000000000000000000000000000000000000160000050000000200000000000000000000000000001920122200330000003030000000000000000001400000000000
...........................................................................................................................................................................................................AGCACCATTCGAAATCAGT................................................................................................191149.001490000000000000000000000000001234710000000000000000000000000000000000000000000000000000000000000000000030000000000000010000400001000000000000000000000000000000000000001212061147362115130000009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000055550000000000001100000000000000000800000000000
.......................................................................................................................................AACTGAGATCGATTGGTGCATA.................................................................................................................................................................221145.0014500000000000000000000000000000110100000000000000000000000100000000000000000000000000000000000000000000800000000000000120000260100100000000000000000000000000000000000012011000110202400000000000000000000000000000000000000000000000000000000020000010100000800000000000000000000000000007188700620000001058000000000000000003100000000000
........................................................................................................................................ACTGAGATCGATTGGTGCATAGAT..............................................................................................................................................................241139.0013900000000000000000000000000008000000000000000000000000000210000000000000000000000000000000000000000000000000000000000300000020000000000000000000000000000000000000000002000011218232500000300000000000000000000000000000000000000000001300000010000000000000300000000000000000000000000006761100100000001012000000000000000005000000000000
.........................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTGCT.............................................................................................241135.001350000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000006400004211160003000000700000000000000000000000000000000000000000000000000150000210200000200000000000000000000000000008191690000000000203000000000000000000000000000000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTC...............................................................................................211122.00122000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000021102001000000000000000000000000000000000000260300221100011000002100000000000000000000000000000000000000000000000000071000319030000030000000000000000000000000001854110000000000000000000000000000000600000000000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCAA............................................................................................241119.00119000010000000000000000000000000000000000000000000000000000000000000000000000000002000000000012003100000037000000000000200000000002022000000000000000000000000000000000000340500010004020000001000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000001120000000000000000000000000000000100000000000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGC................................................................................................201117.001170000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000010000000011000000000000000000000000000000000000008100200011002250000001400000000000000000000000000000000000000000000000000020000010000000000000000000000000000000000007911190010000000802000000000000000000700000000000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGA................................................................................................20199.009900001000000000000000000000000000000000000000000000000000000000000000000000000000300000000008000000000200000000000000100000000000000000000000000000000000000000000000046020013001126100000400000000000000000000000000000000000000000000000000010000050000000000000000000000000000000000005214500000000000001000000000000000002000000000000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGTC.............................................................................................23196.00960000200000000061010000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000022030001021400000000000000000000000000000000000004002000102030110000010000000000000000000000000000000000000000000000000002000021000000030000000000000000000000000000656100023000000103000000000000000000700000000000
..........................................................................................................................................TGAGATCGATTGGTGCATAGA...............................................................................................................................................................21195.0095000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000010000003000000000000001000000200004000000000000000000000000000000000000020000000101040000000000000000000000000000000000000000000000000000000000200001000000001400000000000000000000000000005135300100000002063000000000000000001602100000000
.......................................................................................................................................AACTGAGATCGATTGGTGCA...................................................................................................................................................................20186.008600001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000054000010000000000000300000000000000000000000000000000000000000000000000010000030000000800000000000000000000000000004458000000000030104000000000000000002100000000000
droEre2
TCCAAGGGGTGCAGGATCGGT---------------------A--GCAGGAGCT----------------ACC-TTCAGGAG-------CTG----------------------CACTCCCACTTCGAGTCGAAGAACTGAGATCGATTGGTGCATAGATAT----CAAGAA-G-CCCCACTC---------AATTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCGGAGTGTC------------A-AATCGGAGCGAACTT-----------CAAATGTG-------CTGTTGAATASizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTG...............................................................................................211128238.00128238142139040911241000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGC..............................................................................................22195673.00956733006126462127825920
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCT.............................................................................................23161190.0061190951109317198499580
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGT..............................................................................................22110972.00109721512702013381210
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGT................................................................................................2019179.00917980108319479930
........................................................................................................................................ACTGAGATCGATTGGTGCATAGA...............................................................................................................................................................2314750.004750220339013542540
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGA..............................................................................................2212323.002323503580819520
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCA.............................................................................................2312272.002272303230019460
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCC.............................................................................................2311803.001803812550115380
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAG.................................................................................................1911617.001617301860614220
........................................................................................................................................ACTGAGATCGATTGGTGCATAG................................................................................................................................................................221909.0090960540498000
.............................................................................................................................................................................................................CACCATTCGAAATCAGTG...............................................................................................181552.00552005025450
........................................................................................................................................ACTGAGATCGATTGGTGCAT..................................................................................................................................................................201360.003600080163360
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCG.............................................................................................231291.00291004002870
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTT...............................................................................................212247.504950016004790
.........................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTG...............................................................................................221240.00240006002340
........................................................................................................................................ACTGAGATCGATTGGTGCATA.................................................................................................................................................................211240.002401050112230
.........................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTGC..............................................................................................231236.002362037001970
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGTA.............................................................................................231209.002090030031760
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTA...............................................................................................211196.001961014001810
...........................................................................................................................................................................................................AGCACCATTCGAAATCAGTG...............................................................................................201153.001531005001380
...........................................................................................................................................................................................................AGCACCATTCGAAATCAGTGC..............................................................................................211134.0013420013001010
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTC...............................................................................................211114.00114003001110
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCTT............................................................................................24196.0096002100750
.........................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTGCT.............................................................................................24191.0091001100800
.............................................................................................................................................................................................................CACCATTCGAAATCAGTGC..............................................................................................19187.008700200850
........................................................................................................................................ACTGAGATCGATTGGTGCATAGAA..............................................................................................................................................................24181.008100004770
........................................................................................................................................ACTGAGATCGATTGGTGCATAGT...............................................................................................................................................................23174.007400400700
...........................................................................................................................................................................................................AGCACCATTCGAAATCAGTGCT.............................................................................................22169.0069301500510
.........................................................................................................................................CTGAGATCGATTGGTGCATAGA...............................................................................................................................................................22160.006040301520
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGAA.............................................................................................23157.0057001100460
............................................................................................................................................................................................................GCACCATTCGAAATCAGTG...............................................................................................19151.005100000510
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGG..............................................................................................22150.005000311450
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGTC.............................................................................................23147.004700500420
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCCA............................................................................................24147.004700900380
........................................................................................................................................ACTGAGATCGATTGGTGCATAGC...............................................................................................................................................................23147.004700300440
..............................................................................................................................................................................................................ACCATTCGAAATCAGTGC..............................................................................................18147.004700100460
..........................................................................................................................................TGAGATCGATTGGTGCATAGA...............................................................................................................................................................21136.003600303300
..........................................................................................................................................................................................................TAGCACCATTCGAAATCA..................................................................................................18233.006600100650
........................................................................................................................................ACTGAGATCGATTGGTGCATAGG...............................................................................................................................................................23132.003200000320
..........................................................................................................................................TGAGATCGATTGGTGCATAGAT..............................................................................................................................................................22132.003200103280
........................................................................................................................................ACTGAGATCGATTGGTGCA...................................................................................................................................................................19128.002800101260
............................................................................................................................................................................................................GCACCATTCGAAATCAGTGC..............................................................................................20124.002410200210
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGA................................................................................................20121.002100500160
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCAA............................................................................................24120.002000100190
.......................................................................................................................................AACTGAGATCGATTGGTGCATAGA...............................................................................................................................................................24119.001900301150
..........................................................................................................................................TGAGATCGATTGGTGCATAG................................................................................................................................................................20118.001800100170
..............................................................................................................................................................................................................ACCATTCGAAATCAGTGCT.............................................................................................19117.001700000170
.........................................................................................................................................................................................................CTAGCACCATTCGAAATCAGT................................................................................................21117.001700000170
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGC................................................................................................20116.001600100150
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGTG.............................................................................................23116.001600100150
.......................................................................................................................................AACTGAGATCGATTGGTGCAT..................................................................................................................................................................21116.001600300130
.............................................................................................................................................................................................................CACCATTCGAAATCAGTGCT.............................................................................................20114.001400300110
.........................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTGT..............................................................................................23113.001300100120
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCTA............................................................................................24112.001200100110
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGAC.............................................................................................23112.001200200100
............................................................................................................................................................................................................GCACCATTCGAAATCAGTGCT.............................................................................................21112.00120050070
droYak3
TCCAAAGGGTGCAGGATCGGA---------------------A--TCAGGAGCT----------------ACC------------TTC-TTG----------------------CCCTACCACTTCGAATCGAAGAACTGAGATCGATTGGTGCATAGATAT----CAAGAC-A-ACCCACTC---------AATTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCGAAGTGTC------------A-AATCGAAGCGAACTT-----------CACATGTG-------CTGTTAAATASizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCT.............................................................................................23153153.00531533738101500937994740000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGC..............................................................................................22120144.0020144115758161700211870400000
........................................................................................................................................ACTGAGATCGATTGGTGCATAGA...............................................................................................................................................................23115960.001596015248521204464360000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGT..............................................................................................2216190.006190821017454376580000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTG...............................................................................................2113383.00338318525001027213790000
........................................................................................................................................ACTGAGATCGATTGGTGCAT..................................................................................................................................................................2013134.00313429890004585150000
........................................................................................................................................ACTGAGATCGATTGGTGCATAG................................................................................................................................................................2212968.002968274450067136150010
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGT................................................................................................2012824.002824120017831986420000
........................................................................................................................................ACTGAGATCGATTGGTGCATAGG...............................................................................................................................................................2311757.00175717560000100000
........................................................................................................................................ACTGAGATCGATTGGTGCATA.................................................................................................................................................................211661.0066162200092620020
........................................................................................................................................ACTGAGATCGATTGGTGCATAGT...............................................................................................................................................................231503.0050348500051210000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCA.............................................................................................231503.00503030016133900000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGA..............................................................................................221445.00445300012131920000
........................................................................................................................................ACTGAGATCGATTGGTGCATAGAA..............................................................................................................................................................241295.002952840101720000
.......................................................................................................................................AACTGAGATCGATTGGTGCAT..................................................................................................................................................................211290.002902840001410000
........................................................................................................................................ACTGAGATCGATTGGTGCA...................................................................................................................................................................191264.002642540004600000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAG.................................................................................................191264.0026473007517900000
........................................................................................................................................ACTGAGATCGATTGGTGCAC..................................................................................................................................................................201182.001821810000100000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCC.............................................................................................231176.0017690105211400000
.......................................................................................................................................AACTGAGATCGATTGGTGCATAGA...............................................................................................................................................................241124.001241140014500000
........................................................................................................................................ACTGAGATCGATTGGTGCATT.................................................................................................................................................................211120.001201190000100000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCTT............................................................................................241106.001060100228210000
.........................................................................................................................................CTGAGATCGATTGGTGCATAGA...............................................................................................................................................................22184.0084770002500000
........................................................................................................................................ACTGAGATCGATTGGTGCATAGAT..............................................................................................................................................................24177.0077750000200000
.........................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTGCT.............................................................................................24169.00690000234600000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCG.............................................................................................23163.00631000214100000
.......................................................................................................................................AACTGAGATCGATTGGTGCATAG................................................................................................................................................................23156.0056480001700000
...........................................................................................................................................................................................................AGCACCATTCGAAATCAGTGC..............................................................................................21150.0050760092800000
...........................................................................................................................................................................................................AGCACCATTCGAAATCAGTGCT.............................................................................................22149.00490000123700000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGTA.............................................................................................23149.00490000133600000
........................................................................................................................................ACTGAGATCGATTGGTGCATAGC...............................................................................................................................................................23149.00493900001000000
........................................................................................................................................ACTGAGATCGATTGGTGCAG..................................................................................................................................................................20144.0044430000100000
.........................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTGC..............................................................................................23143.0043200063500000
........................................................................................................................................ACTGAGATCGATTGGTGCATTT................................................................................................................................................................22141.0041380000300000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGG..............................................................................................22139.00391700071500000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTT...............................................................................................21137.0037100092700000
........................................................................................................................................ACTGAGATCGATTGGTGCATAT................................................................................................................................................................22135.0035350000000000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTTT..............................................................................................22134.0034200072500000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTA...............................................................................................21124.0024000071700000
.......................................................................................................................................AACTGAGATCGATTGGTGCATT.................................................................................................................................................................22124.0024220000200000
........................................................................................................................................ACTGAGATCGATTGGTGC....................................................................................................................................................................18122.0022211000000000
........................................................................................................................................ACTGAGATCGATTGGTGCATAA................................................................................................................................................................22121.0021200001000000
............................................................................................................................................................................................................GCACCATTCGAAATCAGTGCT.............................................................................................21121.0021000061500000
.............................................................................................................................................................................................................CACCATTCGAAATCAGTG...............................................................................................18121.0021300061200000
........................................................................................................................................ACTGAGATCGATTGGTGCATAC................................................................................................................................................................22120.0020180000200000
.........................................................................................................................................CTGAGATCGATTGGTGCATAGAT..............................................................................................................................................................23119.0019190000000000
.......................................................................................................................................AACTGAGATCGATTGGTGCAC..................................................................................................................................................................21115.0015150000000000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGC................................................................................................20115.0015100011300000
.......................................................................................................................................AACTGAGATCGATTGGTGCATA.................................................................................................................................................................22115.0015130001100000
.........................................................................................................................................CTGAGATCGATTGGTGCATAGT...............................................................................................................................................................22114.0014140000000000
.......................................................................................................................................AACTGAGATCGATTGGTGCATAGG...............................................................................................................................................................24114.0014140000000000
..........................................................................................................................................TGAGATCGATTGGTGCATAGAT..............................................................................................................................................................22113.001380002300000
.........................................................................................................................................CTGAGATCGATTGGTGCATAG................................................................................................................................................................21113.0013120000010000
...........................................................................................................................................................................................................AGCACCATTCGAAATCAGTGT..............................................................................................21113.0013000031000000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCTC............................................................................................24112.001200003900000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGTC.............................................................................................23111.001100002900000
........................................................................................................................................ACTGAGATCGATTGGTGCG...................................................................................................................................................................19111.0011110000000000
.......................................................................................................................................AACTGAGATCGATTGGTGCATAGT...............................................................................................................................................................24110.0010100000000000
.......................................................................................................................................AACTGAGATCGATTGGTGCATTT................................................................................................................................................................23110.0010100000000000
.............................................................................................................................................................................................................CACCATTCGAAATCAGTGC..............................................................................................1919.00980000100000
droEug1
TCCAAAGGGTGCAGGATCGGA---------------------C----------------------------------------------------------------------------TCACTTCGAATCGAAGAACTGAGATCGATTGGTGCATAGATAT----CAAGGA-A-ACATACTC---------ATTTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCAGAGTGCC------------TTAATCGAAGTGATTTT-----------TAAGTGAA-------ACTTTAAATASizeHit CountTotal NormTotal
No Reads
droBia1
TCCAAAGGGTGCAGGATCGCA---------------------G--TGGGGAGCA-----------------C-------------------------------------------TCTTCCCCTTCGAATCGAAGAACTGAGATCGACTGGTGCATAGATAT----CAGGGA-A-AGCCACCC---------ATTTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAGCAATCAGCAGAGTGTC------------TCGCTCGGAGTGAATTT-----------CAACGCTGCCCCGCCTCTCCAACGASizeHit CountTotal NormTotal
No Reads
droTak1
TCCAAAGGGTGCAGGATCGAA---------------------A--TCTGGAGCA-----------------C-------------TGC-TCG----------------------C-------CTTCGAATCGAAGAACTGAGATCGATTGGTGCATAGATAT----CAAGGAAA-ACCCACTC---------ATTTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCAGAGTGTC------------TCAATCGAAGTGAACTC-----------CAGAAGTG-------TCTTCGGCGASizeHit CountTotal NormTotal
No Reads
droEle1
TTCAAAAGTGGCAGGATCGGA---------------------AAAAAAGGAGCT-----------------------------------------------------------------CTTCTTCGAATCGAAGAACTGAGCTCGATTGGTGCATAGATAT----CAAGGG-A-ACCCGCTC---------ATTTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAATCAATCAGCAGAGTGTC------------TTAATCGAAGTGAATTT-----------TTACTGTG-------CCTCTAAAGASizeHit CountTotal NormTotal
No Reads
droRho1
TCCAAAAGTGGCAGGATCGAA---------------------A--TCAGGAGCT-----------------CC------------ATC-CAC----------------------CCAGCACACTTCGAATCGAAGAACTGAGATCGATTGGTGCATAGATAT----CAAGGG-A-ACCCGCTC---------ATTTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAATCAATCAGCAGAGTGCC------------TTAATCGAAGTGAATTT-----------TAAATGAG-------CCTTCGAATASizeHit CountTotal NormTotal
No Reads
droFic1
CCCGAAATCGGCAGGATGGGT---------------------A--TCAAGAATC----------------AGG--------A--AT-C-CACACA--------------------G--AAGCCTTCGAATCGAAGAACTGAGATCGATTGGTGCATAGATATAC--CAAGGA-A-ACCCGCTC---------ATTTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAAACAATCAGCAGAGTGTC------------GCAAGCAAAGCCAACTTCAACTTCAAC-TGTGT----------CCCCAGAATASizeHit CountTotal NormTotal
No Reads
droKik1
CGG--------CAGGATCGCA-------GG------------A--T----------------------------TTGAGGGA--GTGCATAC----------------------CGAGGACAGTTCGAATCGAAGAACTGAGATCGATTGGTGCATAGATAT----CAAGGAGACACCCGCTT---------AT-TTAACTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAACCAATCAGCAGAGTGTC------------G-AAAAAATACAAACAT------TAAC-TGTGTGAA------CGTTTCAAGAASizeHit CountTotal NormTotal
No Reads
droAna3
GGCAACAGGATCATCATTGAC---------------------A--GGA-----------------------TT------------AGC-TAG----------------------CCAGGATAATTCGAATCAAAGAACTGAGATCGATTGGTGCATAGATAT----CAAGGA-G-ATCCGATC---------ATTTCAATTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAACCACTCAACAGA----------------------TAAAGTG--TTT-----------TGTGTGTG-------TTTTTCAACASizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCT.............................................................................................23154874.005487453111847731336029
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTG...............................................................................................21140769.004076912241161710738918
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGC..............................................................................................22131985.0031985103121674014224987
........................................................................................................................................ACTGAGATCGATTGGTGCATAGA...............................................................................................................................................................2317942.00794224004671587293
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGT..............................................................................................2217399.007399130039573603069
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGT................................................................................................2014767.004767111022193562180
........................................................................................................................................ACTGAGATCGATTGGTGCAT..................................................................................................................................................................2011834.001834300100491682
........................................................................................................................................ACTGAGATCGATTGGTGCATAG................................................................................................................................................................2211745.0017452100241671416
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCA.............................................................................................231859.008595002575592
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGA..............................................................................................221742.007422002924444
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAG.................................................................................................191620.006203003060311
........................................................................................................................................ACTGAGATCGATTGGTGCATA.................................................................................................................................................................211562.005622003814508
.......................................................................................................................................AACTGAGATCGATTGGTGCAT..................................................................................................................................................................211524.005241003214477
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTT...............................................................................................211458.00458100491407
.......................................................................................................................................AACTGAGATCGATTGGTGCATAGA...............................................................................................................................................................241301.003010001813270
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTA...............................................................................................211269.00269000192248
........................................................................................................................................ACTGAGATCGATTGGTGCATAGT...............................................................................................................................................................231224.00224000177200
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCTT............................................................................................241195.00195000601134
........................................................................................................................................ACTGAGATCGATTGGTGCATAGAA..............................................................................................................................................................241186.0018600080178
........................................................................................................................................ACTGAGATCGATTGGTGCA...................................................................................................................................................................191175.0017500076162
.............................................................................................................................................................................................................CACCATTCGAAATCAGTG...............................................................................................181168.00168000100158
.......................................................................................................................................AACTGAGATCGATTGGTGCATAG................................................................................................................................................................231158.00158000232133
...............................................................................................................................................................TAT----CAAGGA-G-ATCCGATC---------ATTTC.........................................................................................................................231149.00149000203126
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTC...............................................................................................211115.0011500021112
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGTA.............................................................................................231115.0011500038374
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCC.............................................................................................23197.009720047147
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCG.............................................................................................23162.006200026036
.........................................................................................................................................CTGAGATCGATTGGTGCATAGA...............................................................................................................................................................22153.00531002347
...........................................................................................................................................................................................................AGCACCATTCGAAATCAGTGC..............................................................................................21152.00528006038
...........................................................................................................................................................................................................AGCACCATTCGAAATCAGTGCT.............................................................................................22151.005130017031
...........................................................................................................................................................................................................AGCACCATTCGAAATCAGTG...............................................................................................20151.005118003030
........................................................................................................................................ACTGAGATCGATTGGTGCATAGAT..............................................................................................................................................................24146.00460002044
.........................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTGC..............................................................................................23143.004300016027
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTTT..............................................................................................22141.004100012326
...............................................................................................................................................................TAT----CAAGGA-G-ATCCGATC---------ATTT..........................................................................................................................22139.003910023114
.......................................................................................................................................AACTGAGATCGATTGGTGCATA.................................................................................................................................................................22139.00390003036
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGG..............................................................................................22139.003910019118
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGC................................................................................................20138.00380003134
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTCT..............................................................................................22132.00320009419
.........................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTG...............................................................................................22132.00320003029
.........................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTGCT.............................................................................................24132.003200019013
........................................................................................................................................ACTGAGATCGATTGGTGCATAT................................................................................................................................................................22131.00310002029
...............................................................................................................................................................TAT----CAAGGA-G-ATCCGATC---------ATTTCA........................................................................................................................24129.002900014015
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGAA.............................................................................................23126.00260007118
........................................................................................................................................ACTGAGATCGATTGGTGCATAA................................................................................................................................................................22123.00230002021
.......................................................................................................................................AACTGAGATCGATTGGTGCA...................................................................................................................................................................20123.00230002120
............................................................................................................................................................................................................GCACCATTCGAAATCAGTGCT.............................................................................................21122.00221008112
..........................................................................................................................................TGAGATCGATTGGTGCATAGAT..............................................................................................................................................................22121.00210003117
.............................................................................................................................................................................................................CACCATTCGAAATCAGTGC..............................................................................................19121.00210000021
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTAT..............................................................................................22121.00210002415
..........................................................................................................................................TGAGATCGATTGGTGCATAGA...............................................................................................................................................................21120.00200004016
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCTTT...........................................................................................25120.00200002018
.........................................................................................................................................CTGAGATCGATTGGTGCATAG................................................................................................................................................................21120.00201003511
..........................................................................................................................................................................................................TAGCACCATTCGAAATCA..................................................................................................18119.00190001801
.......................................................................................................................................AACTGAGATCGATTGGTGCATAGT...............................................................................................................................................................24119.00190002215
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGA................................................................................................20118.00180001206
...............................................................................................................................................................TAT----CAAGGA-G-ATCCGATC---------ATTTCAAT......................................................................................................................26117.00170003014
..............................................................................................................................................................................................................ACCATTCGAAATCAGTGC..............................................................................................18114.00141002011
............................................................................................................................................................................................................GCACCATTCGAAATCAGTGC..............................................................................................20113.00130003010
...............................................................................................................................................................TAT----CAAGGA-G-ATCCGATC---------ATT...........................................................................................................................21113.00130003010
........................................................................................................................................ACTGAGATCGATTGGTGCATAGC...............................................................................................................................................................23112.0012000606
.......................................................................................................................................AACTGAGATCGATTGGTGCATAGAA..............................................................................................................................................................25111.00110000011
droBip1
G--------------ATTGGAACTACCAGGACCTACACTGACA--GGA-----------------------TT------------AGC-TAG----------------------CCAGGATAATTCGAATCAAAGAACTGAGATCGATTGGTGCATAGATAT----CAAGGA-G-ATCCGATC---------ATTTCAATTCTAGCACCATTCGAAATCAGTGCTTTTGATAAGAACCACTCAACCAA----------------------TAAAGTG--TTC-----------TGTGTGTG-------TTTTTCTACASizeHit CountTotal NormTotal
No Reads
dp5
TCAG-CGCCGGCAGGA----G---------------------A--CCAGGAGCA----------------GCC-------------------GAGCAGCAGGACACTTCTTA--CAATTACAGTTCGAATCGAAGAACTGAGATCGATTGGTGCATAGATAT----CAAGAG-G-ACTCGCTAA--------TTTTCAACTCTAGCACCATTCGAAATCAGTGCTTTTGATGAGAACCATTCAACAGAAAGTG----------TTT-CTCCAAAGTGATTTT----------TTTTCAGTG-------C---ATGACASizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGC..............................................................................................22144452.0044452227493180511233523201
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCT.............................................................................................23128104.002810402481290832487565301
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTG...............................................................................................2118562.0085620146165440185417000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGT..............................................................................................2213759.003759019010280268032000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGT................................................................................................2011579.00157901404760106425000
........................................................................................................................................ACTGAGATCGATTGGTGCATAGA...............................................................................................................................................................2311004.00100418551237242442151209
.........................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTGC..............................................................................................231994.009940009660280000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCC.............................................................................................231812.008120007700420000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGA..............................................................................................221628.0062808024003800000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCA.............................................................................................231286.002860203802451000
.........................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTG...............................................................................................221266.00266000261050000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAG.................................................................................................191164.00164070620941000
.........................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTGCT.............................................................................................241127.00127010920340000
........................................................................................................................................ACTGAGATCGATTGGTGCATAG................................................................................................................................................................221122.001221110230739005
.......................................................................................................................................AACTGAGATCGATTGGTGCATAGA...............................................................................................................................................................241115.001152903305540111
...........................................................................................................................................................................................................AGCACCATTCGAAATCAGTGC..............................................................................................211100.001000240590170000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGC................................................................................................201100.0010000193060000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCTT............................................................................................24181.0081030340440000
.......................................................................................................................................AACTGAGATCGATTGGTGCAT..................................................................................................................................................................21179.00793202903312000
.......................................................................................................................................AACTGAGATCGATTGGTGCATAG................................................................................................................................................................23165.0065240100444001
...........................................................................................................................................................................................................AGCACCATTCGAAATCAGTG...............................................................................................20159.0059014043020000
.........................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTGT..............................................................................................23159.0059000490100000
...........................................................................................................................................................................................................AGCACCATTCGAAATCAGTGCT.............................................................................................22153.0053012070331000
........................................................................................................................................................................................................TCTAGCACCATTCGAAATCAGTGC..............................................................................................24150.005000049000100
........................................................................................................................................ACTGAGATCGATTGGTGCAT..................................................................................................................................................................20148.0048430120225002
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTT...............................................................................................21139.0039000280110000
........................................................................................................................................ACTGAGATCGATTGGTGCATA.................................................................................................................................................................21139.0039220120174002
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTA...............................................................................................21130.0030000160131000
.........................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTGCC.............................................................................................24130.003000030000000
.........................................................................................................................................................................................................CTAGCACCATTCGAAATCAGT................................................................................................21130.003001027020000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGAA.............................................................................................23129.0029000190100000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGTA.............................................................................................23127.0027000110160000
.........................................................................................................................................CTGAGATCGATTGGTGCATAGA...............................................................................................................................................................22125.00250802065004
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTC...............................................................................................21119.001900017020000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCG.............................................................................................23119.001900020170000
.......................................................................................................................................AACTGAGATCGATTGGTGCATA.................................................................................................................................................................22117.00171007090000
........................................................................................................................................ACTGAGATCGATTGGTGCATAGT...............................................................................................................................................................23116.00161208041000
.........................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTGA..............................................................................................23115.001500014010000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGAC.............................................................................................23114.001400012020000
........................................................................................................................................ACTGAGATCGATTGGTGCATAGAA..............................................................................................................................................................24114.00140109021001
............................................................................................................................................................................................................GCACCATTCGAAATCAGTGCT.............................................................................................21113.001300000130000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGTC.............................................................................................23113.001300010030000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGG..............................................................................................22112.001200010020000
........................................................................................................................................................................................................TCTAGCACCATTCGAAATCAGTG...............................................................................................23112.001200012000000
...........................................................................................................................................................................................................AGCACCATTCGAAATCAGTGT..............................................................................................21112.00120104070000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTAA..............................................................................................22111.00110007040000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTTT..............................................................................................22110.00100009010000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCTC............................................................................................24110.00100004060000
.........................................................................................................................................................................................................CTAGCACCATTCGAAATCAGC................................................................................................2119.0090009000000
...............................................................................................................................................................TAT----CAAGAG-G-ACTCGCTAA--------TTTTCAACT.....................................................................................................................2818.0080005021000
.......................................................................................................................................AACTGAGATCGATTGGTGCA...................................................................................................................................................................2018.0080200060000
..........................................................................................................................................TGAGATCGATTGGTGCATAGA...............................................................................................................................................................2118.0080301040000
............................................................................................................................................................................................................GCACCATTCGAAATCAGTGC..............................................................................................2017.0070001060000
...............................................................................................................................................................TAT----CAAGAG-G-ACTCGCTAA--------TTTTCAACTC....................................................................................................................2916.0060006000000
...............................................................................................................................................................TAT----CAAGAG-G-ACTCGCTAA--------TTTTC.........................................................................................................................2415.0050002030000
.......................................................................................................................................AACTGAGATCGATTGGTGCATAGAA..............................................................................................................................................................2515.0050103010000
.......................................................................................................................................AACTGAGATCGATTGGTGCAC..................................................................................................................................................................2115.0050005000000
droWil2
TACACCTCAATGGGGATCCCT---------------------A--TG-----------------------ACA-TTAAGGAC--ATAC----GGACCACAT--------------ACAAATTGTTCGAATTAAAGAACTGAGATCGATTGGTGCATAGATAA----TATGCG-A-ATTCTATCATTTGATTTCATTCAATTCTAGCACCATTCGAAATCAGTGCTTTTGATTAGAACCAATCAACAAGAG------------------ATGGCATTAAATTA-----------CAATTGCT-------ACAGTAAATASizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTG...............................................................................................211148218.00148218109531971147030
........................................................................................................................................ACTGAGATCGATTGGTGCATAGA...............................................................................................................................................................23193383.0093383779341824215324
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGC..............................................................................................22148615.004861542435138944265
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCT.............................................................................................23144221.00442212324509543840
........................................................................................................................................ACTGAGATCGATTGGTGCATAG................................................................................................................................................................22110840.001084096341941192
........................................................................................................................................ACTGAGATCGATTGGTGCAT..................................................................................................................................................................2019442.009442765001701775
........................................................................................................................................ACTGAGATCGATTGGTGCATAGG...............................................................................................................................................................2317101.007101708500016
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGT................................................................................................2014435.00443562049114313
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGT..............................................................................................2213470.0034702503673402
........................................................................................................................................ACTGAGATCGATTGGTGCATA.................................................................................................................................................................2112633.0026332347022282
........................................................................................................................................ACTGAGATCGATTGGTGCATAGC...............................................................................................................................................................2312238.002238219600042
........................................................................................................................................ACTGAGATCGATTGGTGCATAGT...............................................................................................................................................................2311238.0012381086010151
........................................................................................................................................ACTGAGATCGATTGGTGCA...................................................................................................................................................................1911221.001221114800073
........................................................................................................................................ACTGAGATCGATTGGTGCATAGAA..............................................................................................................................................................2411161.001161881002278
.......................................................................................................................................AACTGAGATCGATTGGTGCATAGA...............................................................................................................................................................241901.00901775000126
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAG.................................................................................................191655.0065544007604
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGA..............................................................................................221627.0062710012614
.........................................................................................................................................CTGAGATCGATTGGTGCATAGA...............................................................................................................................................................221580.00580313021264
.............................................................................................................................................................................................................CACCATTCGAAATCAGTG...............................................................................................181464.0046413000451
........................................................................................................................................ACTGAGATCGATTGGTGCATAGAT..............................................................................................................................................................241409.0040935000158
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCA.............................................................................................231352.003520012349
..........................................................................................................................................TGAGATCGATTGGTGCATAGAT..............................................................................................................................................................221287.0028722000265
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTA...............................................................................................211279.002790000279
........................................................................................................................................ACTGAGATCGATTGGTGCAC..................................................................................................................................................................201277.002772730004
.........................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTG...............................................................................................221273.002730000273
.......................................................................................................................................AACTGAGATCGATTGGTGCAT..................................................................................................................................................................211272.0027221500156
..........................................................................................................................................TGAGATCGATTGGTGCATAGA...............................................................................................................................................................211203.0020317000186
...........................................................................................................................................................................................................AGCACCATTCGAAATCAGTG...............................................................................................201171.001710000171
.......................................................................................................................................AACTGAGATCGATTGGTGCATAG................................................................................................................................................................231165.0016515200013
........................................................................................................................................ACTGAGATCGATTGGTGCATAA................................................................................................................................................................221136.0013612000016
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTT...............................................................................................211132.001320000132
.........................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTGC..............................................................................................231128.0012819003106
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTC...............................................................................................211113.001130000113
.........................................................................................................................................CTGAGATCGATTGGTGCATAGAT..............................................................................................................................................................231111.001118500026
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGG..............................................................................................221107.001074800059
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCC.............................................................................................231102.001022100081
........................................................................................................................................ACTGAGATCGATTGGTGCATT.................................................................................................................................................................21185.0085800005
........................................................................................................................................ACTGAGATCGATTGGTGCATAT................................................................................................................................................................22183.0083780005
.......................................................................................................................................AACTGAGATCGATTGGTGCATAGG...............................................................................................................................................................24178.0078780000
...........................................................................................................................................................................................................AGCACCATTCGAAATCAGTGCT.............................................................................................22177.0077000077
.............................................................................................................................................................................................................CACCATTCGAAATCAGTGC..............................................................................................19177.0077400073
.........................................................................................................................................CTGAGATCGATTGGTGCATAG................................................................................................................................................................21173.00736300010
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGTA.............................................................................................23166.0066300063
...........................................................................................................................................................................................................AGCACCATTCGAAATCAGTGC..............................................................................................21165.0065410060
............................................................................................................................................................................................................GCACCATTCGAAATCAGTG...............................................................................................19161.0061000061
.........................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTGCT.............................................................................................24158.0058000058
........................................................................................................................................ACTGAGATCGATTGGTGCAG..................................................................................................................................................................20150.0050500000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCTT............................................................................................24143.0043000043
..........................................................................................................................................TGAGATCGATTGGTGCATAG................................................................................................................................................................20143.00431300030
..............................................................................................................................................................................................................ACCATTCGAAATCAGTGC..............................................................................................18140.00401600024
........................................................................................................................................ACTGAGATCGATTGGTGCG...................................................................................................................................................................19137.0037370000
..........................................................................................................................................TGAGATCGATTGGTGCATAGATA.............................................................................................................................................................23136.0036000036
.......................................................................................................................................AACTGAGATCGATTGGTGCATA.................................................................................................................................................................22133.0033310002
........................................................................................................................................ACTGAGATCGATTGGTGCATAGATT.............................................................................................................................................................25133.0033290004
.......................................................................................................................................AACTGAGATCGATTGGTGCATAGT...............................................................................................................................................................24129.0029270002
........................................................................................................................................ACTGAGATCGATTGGTGCATAC................................................................................................................................................................22126.0026240002
.........................................................................................................................................CTGAGATCGATTGGTGCATAGG...............................................................................................................................................................22123.0023230000
........................................................................................................................................ACTGAGATCGATTGGTGCATAGAC..............................................................................................................................................................24123.0023190004
............................................................................................................................................................................................................GCACCATTCGAAATCAGTGC..............................................................................................20120.0020000020
........................................................................................................................................ACTGAGATCGATTGGTGCATAGATAA----T.......................................................................................................................................................27120.0020140006
.........................................................................................................................................CTGAGATCGATTGGTGCAT..................................................................................................................................................................19117.0017120005
............................................................................................................................................................................................................GCACCATTCGAAATCAGTGCT.............................................................................................21117.0017000017
.......................................................................................................................................AACTGAGATCGATTGGTGCATAGC...............................................................................................................................................................24117.0017150002
........................................................................................................................................ACTGAGATCGATTGGTGC....................................................................................................................................................................18116.0016160000
.......................................................................................................................................AACTGAGATCGATTGGTGCA...................................................................................................................................................................20116.0016150001
........................................................................................................................................ACTGAGATCGATTGGTGCATAGCA..............................................................................................................................................................24116.0016160000
........................................................................................................................................ACTGAGATCGATTGGTGCATAGAAT.............................................................................................................................................................25116.0016160000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGA................................................................................................20115.0015000015
droVir3
A---AGTGCTTCAATATATAT---------------------A--TATAT----ATATAGACTAATACGA--CACCC-----AACTA---TG-CA--------------------CCAGCCAGTTCAAATTGAAGAACTGAGATCGATTGGTGCATAGATATCGC--CCAAA-A-AGTAATTC---------ATTTCAATTCTAGCACCATTCGAAATCAGTGCTTTTTATTCGAACCGATCAGCGGCGCATC------------A-AAACAA---------------------------------------------SizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCT.............................................................................................23152244.005224403013711401000000703337331196310931082570371217784514131687413532103361600000000000000000002162622503100000000100000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGC..............................................................................................22132465.003246511433192232301010000487923805731392301516064398143901114120242515640223330912151000000000000000000502925824012730010113200000
........................................................................................................................................ACTGAGATCGATTGGTGCATAGA...............................................................................................................................................................23111133.00111332309367130001616001112238341178499267191000116001010000000001100010003021041514392900102134401628444703030
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTG...............................................................................................21110390.0010390112573100100000111560846285671123359321393948011018281710131001000000000000000005022586900031100100000030
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGT..............................................................................................2219468.00946803920010000000128768521358811664821969110400111211011030512000000000000000000002929900000000000000000
.......................................................................................................................................AACTGAGATCGATTGGTGCAT..................................................................................................................................................................2116987.00698795616510000005000057301432763017688000001200000000000000000000000000015002722000010000101001120
.......................................................................................................................................AACTGAGATCGATTGGTGCATAGA...............................................................................................................................................................2415964.0059649850943000040820107240172536550409200000420200000000001000020000000012820213260012412212102014700003
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGT................................................................................................2014924.004924214600000000000342185821524341970424278010100203000000220000000000000000010127672800000000000000000
.......................................................................................................................................AACTGAGATCGATTGGTGCATAG................................................................................................................................................................2312983.00298352219610012003000097361839536035110300000130000001100000000000000000006002151600012334010311033
........................................................................................................................................ACTGAGATCGATTGGTGCATAG................................................................................................................................................................2212590.0025902920634000000000005628121630250333900000000000010000000000000000000003012261000012011220110102
........................................................................................................................................ACTGAGATCGATTGGTGCAT..................................................................................................................................................................2011765.001765321555100000030000513251080717000000000000000000000000000000000040095600000000001010000
........................................................................................................................................ACTGAGATCGATTGGTGCATAGG...............................................................................................................................................................2311298.00129830126800000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCA.............................................................................................2311137.001137002000000000001449713451007601731690113000010004120000000000000000000000303002000000000000000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGA..............................................................................................221898.0089804510000000000452516294825077780000000000200001000000000000000000100537102000000000000001
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCTT............................................................................................241851.008510070000000000014897276652760125172000000000000001000000000000000000000078000200000000000000
.......................................................................................................................................AACTGAGATCGATTGGTGCATAGG...............................................................................................................................................................241717.007171869900000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAG.................................................................................................191687.006870810000000000032298173321033280000010000000000000000000000000000200471100000000000000002
.......................................................................................................................................AACTGAGATCGATTGGTGCATA.................................................................................................................................................................221471.0047153810000000000001160594059001000000000000000000000000000000000026500000002020000000
........................................................................................................................................ACTGAGATCGATTGGTGCATAGT...............................................................................................................................................................231415.004153388000000000000010000012000000000000000000000000000000000060013000000001000000000
........................................................................................................................................ACTGAGATCGATTGGTGCATA.................................................................................................................................................................211411.004115314000000000000434691018000000000000000000000000000000000000049500000011000000000
.......................................................................................................................................AACTGAGATCGATTGGTGCATAGT...............................................................................................................................................................241401.004014362000000000000610122011000000000000000000000000000000000060014000000000000000100
........................................................................................................................................ACTGAGATCGATTGGTGCA...................................................................................................................................................................191321.003214281100000000000110110013000000000000000000000000000000000000025000000001000100000
.......................................................................................................................................AACTGAGATCGATTGGTGCAC..................................................................................................................................................................211302.00302529500000000000000000000000000000000000000000000000000000000002000000000000000000
........................................................................................................................................ACTGAGATCGATTGGTGCATAGAA..............................................................................................................................................................241249.00249219900000002000056116004900001000000011000000000000000000004000100000002110200000
.......................................................................................................................................AACTGAGATCGATTGGTGCA...................................................................................................................................................................201240.002402204100000000000010021053000000000020000000000000000000000030013000010002000000000
.......................................................................................................................................AACTGAGATCGATTGGTGCATT.................................................................................................................................................................221183.001830162000000000000410001020000000000000000000000000000000000010012000000000000000000
.......................................................................................................................................AACTGAGATCGATTGGTGCATAGAA..............................................................................................................................................................251176.00176013300000000000033003304500000000010000000000000000000000001015000040101202200002
.........................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTGC..............................................................................................231164.0016402100000000000202139131402733000000000000010000000000000000000000020000000000000000000
........................................................................................................................................ACTGAGATCGATTGGTGC....................................................................................................................................................................181149.00149114510000000000001000001000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................AACTGAGATCGATTGGTGCATAT................................................................................................................................................................231142.00142113200000000000000000301100000000000000000000000000000000000004000000000000000000
........................................................................................................................................ACTGAGATCGATTGGTGCATT.................................................................................................................................................................211136.00136013200000000000000010001000000000000000000000000000000000001001000000000000000000
.......................................................................................................................................AACTGAGATCGATTGGTGCATAGAT..............................................................................................................................................................251121.00121110900000000000001101001000000000000000000000000000000000002003000000000010000001
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTT...............................................................................................211121.0012101000000000000821470022000000000000000000000000000000000000093100000000000000000
.........................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTGCT.............................................................................................241114.0011400100000000000218143702818000010000000000000000000000000000000022000000000000000000
........................................................................................................................................ACTGAGATCGATTGGTGCATAGAT..............................................................................................................................................................241110.00110310300000000000010000100000000000000000000000000000000000001001000000000000000000
.......................................................................................................................................AACTGAGATCGATTGGTGCAG..................................................................................................................................................................211109.00109210700000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCC.............................................................................................231108.001080300000000000067157611214000001000000000000000000000000000000045000000000000000000
........................................................................................................................................ACTGAGATCGATTGGTGCAC..................................................................................................................................................................20195.009539100000000000000000000000000000000000000000000000000000000001000000000000000000
.......................................................................................................................................AACTGAGATCGATTGGTGCATAA................................................................................................................................................................23194.009408000000000000040011200100000000010000000000000000000000000004000000000000000000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTA...............................................................................................21175.007500000000000000260263043000000000000000000000000000000000000049000000000000000000
.......................................................................................................................................AACTGAGATCGATTGGTGCATTT................................................................................................................................................................23172.007206600000000000010000000100000000000000000000000000000000000004000000000000000000
........................................................................................................................................ACTGAGATCGATTGGTGCATAT................................................................................................................................................................22171.007107100000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................AACTGAGATCGATTGGTGCATAGC...............................................................................................................................................................24168.006826400000000000001000000100000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................AGCACCATTCGAAATCAGTGCT.............................................................................................22165.0065001100000000000820421076000000000000000000000000000000000000024000000000000000000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGTA.............................................................................................23161.006100000000000100530213053000000000000000000000000000000000000038000000000000000000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCTTT...........................................................................................25157.005700100000000000136372608900000000000000000000000000000000000002000000000000000000
...........................................................................................................................................................................................................AGCACCATTCGAAATCAGTGC..............................................................................................21143.0043001500000000000201122034000000000000000000000000000000000000013000000000000000000
.........................................................................................................................................CTGAGATCGATTGGTGCATAGA...............................................................................................................................................................22143.004313710000000000000010000000000000000000000000000000000000000002000000000100000000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCA..................................................................................................18142.00420110000000000062144505300000000010000000000000000000000000009000000000000000000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGAA.............................................................................................23140.004001100000000000500151053000000000000000000000000000000000000016100000000000001000
........................................................................................................................................ACTGAGATCGATTGGTGCATAA................................................................................................................................................................22140.004013800000000000000000000000000000000000000000000000000000000001000000000000000000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGC................................................................................................20139.003900000000000000000100001000000000000000000000000000000000000037000000000000000000
........................................................................................................................................ACTGAGATCGATTGGTGT....................................................................................................................................................................18138.003803500000000000000000000000000000000000000000000000000000000003000000000000000000
.......................................................................................................................................AACTGAGATCGATTGGTGC....................................................................................................................................................................19135.003503200000000000000001100100000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................ACCATTCGAAATCAGTGCT.............................................................................................19130.00300010000000000073144201400000000000000000000000000000000000003000000000000000000
..........................................................................................................................................TGAGATCGATTGGTGCATAGAT..............................................................................................................................................................22130.00300800000001000051000104100000000000000000000000000000000001114000000000001000001
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCG.............................................................................................23130.003001000000000000230131001000000000000000000000000000000000000018000000000000000000
.........................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTG...............................................................................................22130.00300010000000000052204404200000000000000000000000000000000000006000000000000000000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCTC............................................................................................24129.00290050000000000050002100800100200200000001000000000000000000002000000000000000000
.............................................................................................................................................................................................................CACCATTCGAAATCAGTG...............................................................................................18127.002700000000000000100132002000000000000000000000000000000000000018000000000000000000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGG..............................................................................................22126.002609000000000000000000002000000000000000000000000000000000000015000000000000000000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCTA............................................................................................24126.00260020000000000042001301600110000000000000000000000000000000000005000000000000000
........................................................................................................................................ACTGAGATCGATTGGTGCAG..................................................................................................................................................................20126.002602600000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................TATCGC--CCAAA-A-AGTAATTC---------ATT...........................................................................................................................23125.00250000000000000044020203400000000000000000000000000000000000006000000000000000000
..........................................................................................................................................TGAGATCGATTGGTGCATAG................................................................................................................................................................20123.002306000000000000120010020000000000000000000000000000000000000011000000000000000000
...............................................................................................................................................................TATCGC--CCAAA-A-AGTAATTC---------AT............................................................................................................................22122.00220000000000000095022001100000000000000000000000000000000000002000000000000000000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCAA............................................................................................24122.00220000000000000012004103500000000000011000000000000000000000001002100000000000000
........................................................................................................................................ACTGAGATCGATTGGTGCATTT................................................................................................................................................................22121.002102000000000000000000000100000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTTT..............................................................................................22221.004200000000000000351161035000000000000000000000000000000000000017000000000000000000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTAA..............................................................................................22120.002000000000000000010010020000000000000000000000000000000000000016000000000000000000
...............................................................................................................................................................TATCGC--CCAAA-A-AGTAATTC---------A.............................................................................................................................21120.00200040000000000042002001500000000000000000000000000000000000002000000000000000000
...............................................................................................................................................................TATCGC--CCAAA-A-AGTAATTC---------ATTT..........................................................................................................................24119.00190000000000000062210101500000000000000000000000000000000000010000000000000000000
........................................................................................................................................ACTGAGATCGATTGGTGCG...................................................................................................................................................................19119.001921700000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................TGAGATCGATTGGTGCATAGA...............................................................................................................................................................21118.00180410000001000021013100100000000000000000000000000000000001002000000000000000000
.........................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTGT..............................................................................................23117.00170000000000000011003106200000000000000000000000000000000000003000000000000000000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTC...............................................................................................21117.001700000000000000010000012000000001000000000000000000000000000012000000000000000000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGA................................................................................................20117.001700100000000000000000000000000000000000000000000000000000000016000000000000000000
........................................................................................................................................ACTGAGATCGATTGGTGCATAC................................................................................................................................................................22116.001601400000000000000000000000000000000000000000000000000000000002000000000000000000
.......................................................................................................................................AACTGAGATCGATTGGTGCATAC................................................................................................................................................................23116.001611400000000000000000000000000000000000000000000000000000000001000000000000000000
.......................................................................................................................................AACTGAGATCGATTGGTGCAA..................................................................................................................................................................21116.001611200000000000010000000000000000000000000000000000000000000002000000000000000000
........................................................................................................................................ACTGAGATCGATTGGTGCATAGC...............................................................................................................................................................23116.00160800000000000000000200100000000000000000000000000000000000005000000000000000000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGG................................................................................................20115.001501000000000000000100000000000000000000000000000000000000000013000000000000000000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTCT..............................................................................................22114.001400000000000000020000011000000000000000000000000000000000000010000000000000000000
............................................................................................................................................................................................................GCACCATTCGAAATCAGTGC..............................................................................................20114.00140010000000000022001001100000000000000000000000000000000000006000000000000000000
............................................................................................................................................................................................................GCACCATTCGAAATCAGTGCT.............................................................................................21114.001400000000000000010001010000000000000000000000000000000000000011000000000000000000
...............................................................................................................................................................................................................CCATTCGAAATCAGTGCT.............................................................................................18114.00140200010000000021010101000000000000000000000000000000000000005000000000000000000
..............................................................................................................................................................................................................ACCATTCGAAATCAGTGC..............................................................................................18113.00130400000000000031011000100000000000000000000000000000000000002000000000000000000
........................................................................................................................................................................................................TCTAGCACCATTCGAAATCAGTGC..............................................................................................24113.00130000000000000011001304100000000000000001000000000000000000001000000000000000000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGTAA............................................................................................24112.00120000000000000020011200000000000000000000000000000000000000006000000000000000000
........................................................................................................................................ACTGAGATCGATTGGTGG....................................................................................................................................................................18112.001201200000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................AACTGAGATCGATTGGTGCATTTT...............................................................................................................................................................24112.001201200000000000000000000000000000000000000000000000000000000000000000000000000000
droMoj3
TATTATG----------------------------------------------------------------CC------------ACA-CACCCA--GC---AGACATCAAACACCACACCAGTTCAAATTGAAGAACTGAGATCGATTGGTGCATAGATAACGC-CCAAAA-A-GTCATTTT---------ATTTCAATTCTAGCACCATTCGAAATCAGTGCTTTTTATTGGAACCGATCAACGGTGTATGGGAACAAGTGTCT-AA---CAGTGATCTA-----------TGAATATG-------TTGCGAAAGASizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCT.............................................................................................23153724.0053724161819758335809208
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGC..............................................................................................22113595.001359513166178712510352
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGT................................................................................................2013586.0035863012022329052
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGT..............................................................................................2213513.0035137012132226265
........................................................................................................................................ACTGAGATCGATTGGTGCATAGA...............................................................................................................................................................2312457.002457108861133810230
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTG...............................................................................................2112000.0020003217991151512
.......................................................................................................................................AACTGAGATCGATTGGTGCATAGA...............................................................................................................................................................2411845.0018459463210514145
.......................................................................................................................................AACTGAGATCGATTGGTGCAT..................................................................................................................................................................2111458.00145830508877070
.......................................................................................................................................AACTGAGATCGATTGGTGCATAG................................................................................................................................................................2311244.00124460450732155
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGA..............................................................................................221374.003740013224200
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAG.................................................................................................191368.003680015421301
........................................................................................................................................ACTGAGATCGATTGGTGCATAG................................................................................................................................................................221273.0027300101158014
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCA.............................................................................................231252.00252009315900
.......................................................................................................................................AACTGAGATCGATTGGTGCATA.................................................................................................................................................................221152.00152006181010
.........................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTGCT.............................................................................................24184.008420235900
.......................................................................................................................................AACTGAGATCGATTGGTGCATAGAA..............................................................................................................................................................25181.008100284607
........................................................................................................................................ACTGAGATCGATTGGTGCATA.................................................................................................................................................................21180.008000383813
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCC.............................................................................................23177.007700294620
........................................................................................................................................ACTGAGATCGATTGGTGCAT..................................................................................................................................................................20176.007610314004
...........................................................................................................................................................................................................AGCACCATTCGAAATCAGTGCT.............................................................................................22162.0062100203200
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCTT............................................................................................24161.006110213900
.......................................................................................................................................AACTGAGATCGATTGGTGCA...................................................................................................................................................................20160.006000233601
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGTA.............................................................................................23147.004700153101
.......................................................................................................................................AACTGAGATCGATTGGTGCATAGT...............................................................................................................................................................24139.003900102603
........................................................................................................................................ACTGAGATCGATTGGTGCATAGAA..............................................................................................................................................................24137.003700142102
........................................................................................................................................ACTGAGATCGATTGGTGCATAGT...............................................................................................................................................................23137.00370092503
.......................................................................................................................................AACTGAGATCGATTGGTGCATAT................................................................................................................................................................23133.003300141900
.........................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTGC..............................................................................................23130.003000161040
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTT...............................................................................................21125.002500111400
.......................................................................................................................................AACTGAGATCGATTGGTGCATAA................................................................................................................................................................23124.00240041901
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTA...............................................................................................21124.00240042000
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTTT..............................................................................................22124.00240081600
...........................................................................................................................................................................................................AGCACCATTCGAAATCAGTGC..............................................................................................21124.0024918600
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCG.............................................................................................23123.00230091400
........................................................................................................................................ACTGAGATCGATTGGTGCA...................................................................................................................................................................19119.00190081100
.......................................................................................................................................AACTGAGATCGATTGGTGCATAGAT..............................................................................................................................................................25118.00180041103
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGAA.............................................................................................23117.00170021401
............................................................................................................................................................................................................GCACCATTCGAAATCAGTGCT.............................................................................................21116.00160061000
........................................................................................................................................ACTGAGATCGATTGGTGCATAGC...............................................................................................................................................................23114.0014006800
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCTC............................................................................................24113.00130031000
..........................................................................................................................................TGAGATCGATTGGTGCATAGAT..............................................................................................................................................................22112.0012105600
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGA................................................................................................20112.0012005700
.......................................................................................................................................AACTGAGATCGATTGGTGCATT.................................................................................................................................................................22112.0012004800
.........................................................................................................................................CTGAGATCGATTGGTGCATAGA...............................................................................................................................................................22111.0011103601
.......................................................................................................................................AACTGAGATCGATTGGTGCATAGC...............................................................................................................................................................24111.0011003800
.........................................................................................................................................................................................................CTAGCACCATTCGAAATCAGT................................................................................................21110.0010102700
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGG..............................................................................................22110.0010005500
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCTA............................................................................................24110.0010007300
.............................................................................................................................................................................................................CACCATTCGAAATCAGTG...............................................................................................18110.00100001000
..............................................................................................................................................................................................................ACCATTCGAAATCAGTGCT.............................................................................................1918.008004400
..........................................................................................................................................................................................................TAGCACCATTCGAAATCA..................................................................................................1818.008004400
.........................................................................................................................................................................................................CTAGCACCATTCGAAATCAGTG...............................................................................................2217.007002500
........................................................................................................................................................................................................TCTAGCACCATTCGAAATCAGT................................................................................................2217.007003400
...........................................................................................................................................................................................................AGCACCATTCGAAATCAGTGT..............................................................................................2117.007102400
........................................................................................................................................ACTGAGATCGATTGGTGT....................................................................................................................................................................1817.007003400
.......................................................................................................................................AACTGAGATCGATTGGTGCAA..................................................................................................................................................................2116.006000600
..........................................................................................................................................TGAGATCGATTGGTGCATAGA...............................................................................................................................................................2116.006000600
droGri2
TACAATG----AAGGAGCAG-------------------------TCAATCACT----------------AAT--------AACCTAT----GTA--------------------GCAGCCAGTTCAAATTGAAGAACTGAGATCGATTGGTGCATAGATATCGTCCAAGA----ATAATTTA---------ATTTCAATTCTAGCACCATTCGAAATCAGTGCTTTGTATTGGAACCGATCAGCGGCGCATT------------A-GCACAAAGTG--TTT-----------CAAGTGAT-------TTATCA--AASizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGC..............................................................................................2213.00312
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTG...............................................................................................2111.00101
..........................................................................................................................................................................................................TAGCACCATTCGAAATCAGTGCT.............................................................................................2311.00110

Generated: 10/20/2015 at 11:17 PM