ID:

dse-mir-13b-1

 Coordinate:

scaffold_0:10705205-10705272 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

3pUTR

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-27.1 -26.8 -26.8

Flybase annnotation

pre_miRNA [Dsec\mir-13b-1-RM]; utr3 [utr3_minus_7788]; miRNA [Dsec\miR-13b-1-RA]

No Repeatable elements found

mature

  1. dse-mir-13b-1  scaffold_0:10705247-10705268 +
  2. dse-mir-13b-2  scaffold_34:345663-345684 +
star

Sense Strand Reads

GCGGATCGAAAAACATATTTCATAACCGACTGAACCGCGTCTTTCTTATACCATGTCGTTAAAATGTTTGTGAACTTATGTATTCGCAATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCAACATTAAGCGGATGCATCCTGCAGTTGTCGACGACG

****************************************.((((((.((((...(((((((((((.((((((...((((..........)))))))))).))))))))))).....))))))))))..*************************************** 		Read size # Mismatch Hit Count Total Norm Total V115

head

 V114

embryo

 M054

female body

 V113

male body
............................................................................................TATCACAGCCATTTTGACGAGT...................................................... 22 0 2 133059.00 266118 151691 74068 14933 25426
............................................................................................TATCACAGCCATTTTGACGAGTT..................................................... 23 0 2 79718.00 159436 35029 40362 53359 30686
............................................................................................TATCACAGCCATTTTGACGAG....................................................... 21 0 2 7510.00 15020 11119 1320 1879 702
............................................................................................TATCACAGCCATTTTGACGAGTTT.................................................... 24 0 2 3517.50 7035 2190 511 1174 3160
............................................................................................TATCACAGCCATTTTGACGAGTTA.................................................... 24 1 2 3292.00 6584 495 3866 1802 421
.............................................................................................ATCACAGCCATTTTGACGAGTT..................................................... 22 0 2 2016.00 4032 55 65 3873 39
............................................................................................TATCACAGCCATTTTGACGAGTTAA................................................... 25 2 2 1337.00 2674 142 1869 570 93
................................................................................................ACAGCCATTTTGACGAGT...................................................... 18 0 2 682.50 1365 836 512 2 15
.............................................................................................ATCACAGCCATTTTGACGAGT...................................................... 21 0 2 563.00 1126 120 22 965 19
............................................................................................TATCACAGCCATTTTGACGA........................................................ 20 0 2 557.00 1114 886 56 144 28
............................................................................................TATCACAGCCATTTTGACGATTT..................................................... 23 1 2 508.50 1017 63 58 865 31
............................................................................................TATCACAGCCATTTTGACGAGA...................................................... 22 1 2 345.50 691 525 34 68 64
............................................................................................TATCACAGCCATTTTGACTAGT...................................................... 22 1 2 299.50 599 285 92 71 151
............................................................................................TATCACAGCCATTTTGACAAGT...................................................... 22 1 2 269.00 538 294 54 18 172
............................................................................................TATCACAGCCATTTTGACGAGC...................................................... 22 1 2 234.00 468 256 140 22 50
............................................................................................TATCACCGCCATTTTGACGAGTT..................................................... 23 1 2 224.00 448 12 10 412 14
............................................................................................TATCACAGCCATTTTGACGAGTTAAA.................................................. 26 3 2 223.50 447 54 217 163 13
.......................................................TCGTTAAAATGTTTGTGAACTTATG........................................................................................ 25 0 1 207.00 207 26 172 6 3
................................................................................................ACAGCCATTTTGACGAGTT..................................................... 19 0 2 206.50 413 162 207 29 15
............................................................................................TATCACAGCCATTTTGACGAGTA..................................................... 23 1 2 204.00 408 146 91 96 75
............................................................................................TATCACACCCATTTTGACGAGTT..................................................... 23 1 2 200.00 400 40 93 230 37
............................................................................................TATCACAGCCATTTTGACCAGT...................................................... 22 1 2 196.50 393 144 34 7 208
............................................................................................TATCACAGCCATTTTGACTAGTT..................................................... 23 1 2 195.50 391 33 15 197 146
............................................................................................TATCACAGCCATTTTGACG......................................................... 19 0 2 192.00 384 285 8 90 1
............................................................................................TATCACAGCCAGCTTGAGGAG....................................................... 21 3 4 188.25 753 316 351 22 64
............................................................................................TATCACACCCATTTTGACGAGT...................................................... 22 1 2 185.00 370 171 131 40 28
............................................................................................TATTACAGCCATTTTGACGAGT...................................................... 22 1 2 179.50 359 56 272 20 11
............................................................................................TATCACATCCATTTTGACGAGT...................................................... 22 1 2 177.50 355 232 62 27 34
............................................................................................TATCACAGCCCTTTTGACGAGT...................................................... 22 1 2 174.50 349 214 52 30 53
............................................................................................TATCACAGCCATTTTGACAAGTT..................................................... 23 1 2 173.50 347 52 29 37 229
............................................................................................TATAACAGCCATTTTGACGAGTT..................................................... 23 1 2 159.50 319 29 11 272 7
............................................................................................TATCACAGCCATTTTGACGATT...................................................... 22 1 2 150.00 300 89 30 176 5
............................................................................................TATCACAACCATTTTGACGAGT...................................................... 22 1 2 147.50 295 229 43 7 16
...........................................................................................CTATCACAGCCATTTTGACGAGT...................................................... 23 1 2 146.00 292 168 82 35 7
............................................................................................TATCACGGCCATTTTGACGAGT...................................................... 22 1 2 145.00 290 149 107 11 23
............................................................................................TATTACAGCCATTTTGACGAGTT..................................................... 23 1 2 142.50 285 19 194 60 12
............................................................................................TATCGCAGCCATTTTGACGAGT...................................................... 22 1 2 142.00 284 160 97 10 17
............................................................................................TATCACAGCCATTTTGACCAGTT..................................................... 23 1 2 141.50 283 27 11 16 229
............................................................................................TACCACAGCCATTTTGACGAGT...................................................... 22 1 2 138.00 276 141 106 4 25
............................................................................................TATCATAGCCATTTTGACGAGT...................................................... 22 1 2 135.50 271 84 161 15 11
............................................................................................TATCACAGCTATTTTGACGAGT...................................................... 22 1 2 131.00 262 72 172 7 11
............................................................................................TATCACAGCAATTTTGACGAGT...................................................... 22 1 2 130.50 261 219 38 1 3
............................................................................................TATAACAGCCATTTTGACGAGT...................................................... 22 1 2 129.00 258 147 13 89 9
............................................................................................TATCACATCCATTTTGACGAGTT..................................................... 23 1 2 124.50 249 56 44 105 44
...........................................................................................CTATCACAGCCATTTTGACGAGTT..................................................... 24 1 2 123.50 247 40 54 135 18
............................................................................................TATCACAGCCATTTTGGCGAGT...................................................... 22 1 2 121.00 242 132 75 12 23
..............................................................................................TCACAGCCATTTTGACGAGTT..................................................... 21 0 2 120.00 240 12 52 172 4
............................................................................................TATCACAGCCATTTCGACGAGT...................................................... 22 1 2 119.50 239 106 94 8 31
............................................................................................TATCACAGACATTTTGACGAGTT..................................................... 23 1 2 119.00 238 23 35 166 14
............................................................................................TATCACAGCCATTTTGACGGGT...................................................... 22 1 2 119.00 238 100 99 16 23
............................................................................................TATCACAGCTATTTTGACGAGTT..................................................... 23 1 2 118.00 236 17 183 27 9
............................................................................................CATCACAGCCATTTTGACGAGT...................................................... 22 1 2 115.50 231 124 61 20 26
............................................................................................TATCACAGACATTTTGACGAGT...................................................... 22 1 2 115.00 230 132 41 45 12
............................................................................................TATCACAGCCCTTTTGACGAGTT..................................................... 23 1 2 112.00 224 41 28 118 37
............................................................................................TATCACAGCCATCTTGACGAGT...................................................... 22 1 2 109.50 219 110 86 3 20
............................................................................................TATCACAGCCACTTTGACGAGT...................................................... 22 1 2 107.00 214 83 90 9 32
............................................................................................TATCACCGCCATTTTGACGAGT...................................................... 22 1 2 99.50 199 45 19 130 5
............................................................................................TATCACAGCCGTTTTGACGAGT...................................................... 22 1 2 98.50 197 100 72 7 18
..............................................................................................TCACAGCCATTTTGACGAGT...................................................... 20 0 2 97.00 194 53 90 47 4
............................................................................................TATCACAGCCATTTTGACGAGTTG.................................................... 24 1 2 96.50 193 74 54 57 8
............................................................................................TATCACAGCCATTTTGCCGAGT...................................................... 22 1 2 96.00 192 107 63 1 21
............................................................................................TATCATAGCCATTTTGACGAGTT..................................................... 23 1 2 94.00 188 18 95 63 12
............................................................................................TATCACAGTCATTTTGACGAGT...................................................... 22 1 2 93.50 187 76 95 5 11
............................................................................................TATCAAAGCCATTTTGACGAGT...................................................... 22 1 2 92.50 185 176 6 0 3
............................................................................................TATCACAGCCATTTTGACGGGTT..................................................... 23 1 2 86.00 172 34 58 58 22
............................................................................................TATCACAGCCATTTTTACGAGT...................................................... 22 1 2 81.00 162 111 19 20 12
............................................................................................TATCACAGCCATTTTGACGCGT...................................................... 22 1 2 81.00 162 98 36 4 24
............................................................................................CATCACAGCCATTTTGACGAGTT..................................................... 23 1 2 79.50 159 33 35 68 23
............................................................................................TATCACAGCCATTTTGGCGAGTT..................................................... 23 1 2 75.50 151 32 42 51 26
............................................................................................TATCACAGCCATTTTCACGAGT...................................................... 22 1 2 75.00 150 77 50 4 19
............................................................................................AATCACAGCCATTTTGACGAGT...................................................... 22 1 2 71.50 143 109 15 17 2
............................................................................................TATCACAGCCATTTTGACGAGTTC.................................................... 24 1 2 71.50 143 42 26 53 22
............................................................................................TATCACAGCCATTTTGACGAGCT..................................................... 23 1 2 71.00 142 27 54 17 44
............................................................................................TATCACAGCCATTTTGCCGAGTT..................................................... 23 1 2 70.00 140 32 64 5 39
............................................................................................TATCACAGCCACTTTGACGAGTT..................................................... 23 1 2 69.50 139 30 47 43 19
............................................................................................TATCACGGCCATTTTGACGAGTT..................................................... 23 1 2 68.50 137 33 62 23 19
............................................................................................TGTCACAGCCATTTTGACGAGT...................................................... 22 1 2 67.50 135 65 47 15 8
............................................................................................TATCACAGCCATTTCGACGAGTT..................................................... 23 1 2 66.00 132 22 63 23 24
.............................................................................................ATCACAGCCATTTTGACGAG....................................................... 20 0 2 66.00 132 5 0 124 3
............................................................................................GATCACAGCCATTTTGACGAGT...................................................... 22 1 2 65.50 131 75 39 12 5
............................................................................................TACCACAGCCATTTTGACGAGTT..................................................... 23 1 2 64.00 128 29 43 19 37
............................................................................................TATCACAGCCATTTTGACGAGTAA.................................................... 24 2 2 61.50 123 23 62 6 32
............................................................................................TATCACAACCATTTTGACGAGTT..................................................... 23 1 2 60.50 121 58 23 24 16
............................................................................................TATCACAGCCATTTTGACGAGTC..................................................... 23 1 2 59.50 119 33 31 21 34
............................................................................................TATCACAGCCATTTTGACGAGTTTG................................................... 25 0 2 59.00 118 28 46 19 25
............................................................................................TATCGCAGCCATTTTGACGAGTT..................................................... 23 1 2 59.00 118 22 51 23 22
............................................................................................TATCACAGCCATTTTGACGACT...................................................... 22 1 2 57.50 115 67 29 5 14
............................................................................................TATCACAGCCATTTTAACGAGT...................................................... 22 1 2 56.00 112 65 37 6 4
.............................................................................................ATCACAGCCATTTTGACGAGTTA.................................................... 23 1 2 55.50 111 0 3 108 0
............................................................................................TATCACAGCCATTTTGACGAAT...................................................... 22 1 2 55.50 111 86 14 4 7
..............................................................................................TATCAGCCATTTTGACGAGT...................................................... 20 2 4 54.75 219 59 142 5 13
............................................................................................TATCACAGCCATTTTTACGAGTT..................................................... 23 1 2 52.50 105 32 8 56 9
............................................................................................TATCACAGCCATTCTGACGAGT...................................................... 22 1 2 52.50 105 55 32 5 13
............................................................................................TATCACAGCCATTTTGAAGAGTT..................................................... 23 1 3 52.00 156 28 12 112 4
............................................................................................AATCACAGCCATTTTGACGAGTT..................................................... 23 1 2 51.50 103 29 5 65 4
............................................................................................TATCACAGCCATTTTGAAGAGT...................................................... 22 1 3 51.00 153 95 16 34 8
............................................................................................TATCACAGCCATCTTGACGAGTT..................................................... 23 1 2 50.50 101 26 44 16 15
............................................................................................TATCACAGCCATTTTGACGAGG...................................................... 22 1 2 47.50 95 50 23 14 8
.............................................................................................ATCACAGCCATTTTGACGAGTTT.................................................... 23 0 2 47.00 94 2 0 90 2
............................................................................................TGTCACAGCCATTTTGACGAGTT..................................................... 23 1 2 46.00 92 22 19 42 9
............................................................................................TATCACAGTCATTTTGACGAGTT..................................................... 23 1 2 45.50 91 12 53 14 12
............................................................................................TATCACAGCCATTTTGACGCGTT..................................................... 23 1 2 45.00 90 19 30 12 29
............................................................................................TATCACTGCCATTTTGACGAGT...................................................... 22 1 2 43.50 87 33 48 2 4
............................................................................................TATCCCAGCCATTTTGACGAGT...................................................... 22 1 2 43.50 87 43 25 3 16
..............................................................................................TATCAGCCATTTTGACGAGTT..................................................... 21 2 3 43.33 130 9 105 9 7
............................................................................................TATCACAGCCATATTGACGAGT...................................................... 22 1 2 42.00 84 11 67 2 4
............................................................................................TATCACAGCAATTTTGACGAGTT..................................................... 23 1 2 42.00 84 64 15 2 3
............................................................................................TATCACAGCCGTTTTGACGAGTT..................................................... 23 1 2 39.00 78 18 34 9 17
............................................................................................TAGCACAGCCATTTTGACGAGTT..................................................... 23 1 2 37.00 74 5 1 67 1
............................................................................................TCTCACAGCCATTTTGACGAGT...................................................... 22 1 2 36.50 73 33 33 0 7
............................................................................................GATCACAGCCATTTTGACGAGTT..................................................... 23 1 2 36.00 72 15 10 41 6
............................................................................................TATCACAGCCATTTTAACGAGTT..................................................... 23 1 2 35.50 71 10 19 36 6
............................................................................................TATCACAGCCATTTTGACGACTT..................................................... 23 1 2 35.00 70 19 8 26 17
............................................................................................TATCACAGCCATTTAGACGAGT...................................................... 22 1 2 33.50 67 6 58 1 2
............................................................................................TATCACAGCCATTTTGACGAA....................................................... 21 1 2 30.50 61 47 0 6 8
.............................................................................................ATCACAGCCATTTTGACGAGGT..................................................... 22 1 2 30.50 61 0 0 61 0
............................................................................................TATCACAGCCATTTTCACGAGTT..................................................... 23 1 2 30.00 60 14 25 4 17
............................................................................................TATCACTGCCATTTTGACGAGTT..................................................... 23 1 2 29.50 59 7 37 10 5
...............................................................................................CACAGCCATTTTGACGAGTT..................................................... 20 0 2 29.50 59 3 6 41 9
............................................................................................TATCACAGCCATTCTGACGAGTT..................................................... 23 1 2 28.00 56 7 12 21 16
............................................................................................TATCAAAGCCATTTTGACGAGTT..................................................... 23 1 2 27.50 55 28 12 8 7
............................................................................................TATCACAGCCATTTTGACGTGT...................................................... 22 1 2 27.50 55 18 25 1 11
............................................................................................TATCACAGCCAATTTGACGAGT...................................................... 22 1 2 26.00 52 23 21 6 2
............................................................................................TATCACAGCCATTTTGTCGAGT...................................................... 22 1 2 26.00 52 14 35 0 3
.......................................................TCGTTAAAATGTTTGTGAACT............................................................................................ 21 0 1 26.00 26 21 4 1 0
............................................................................................TATCACAGCCATTTTGACGAGTTAT................................................... 25 2 2 25.00 50 1 43 1 5
...........................................................................................TTATCACAGCCATTTTGACGAGTT..................................................... 24 1 2 24.50 49 0 0 49 0
............................................................................................TAACACAGCCATTTTGACGAGT...................................................... 22 1 2 24.50 49 29 17 2 1
............................................................................................TATCACAGCCATATTGACGAGTT..................................................... 23 1 2 24.00 48 1 32 12 3
............................................................................................TATCACAGCCATTATGACGAGT...................................................... 22 1 2 23.50 47 10 31 5 1
............................................................................................TATCTCAGCCATTTTGACGAGT...................................................... 22 1 2 23.50 47 25 19 1 2
............................................................................................TATCACAGCCATTTTGACGAATT..................................................... 23 1 2 23.50 47 18 5 19 5
...............................................................................................CACAGCCATTTTGACGAGT...................................................... 19 0 2 23.00 46 16 13 14 3
...........................................................................................GTATCACAGCCATTTTGACGAGTT..................................................... 24 1 2 22.50 45 0 0 45 0
.............................................................................................ATCACAGCCATTTTGACGAGTTAA................................................... 24 2 2 22.50 45 1 0 44 0
............................................................................................TATCACAGCCATTTTGACGAGTTTT................................................... 25 1 2 22.00 44 12 5 9 18
............................................................................................TCTCACAGCCATTTTGACGAGTT..................................................... 23 1 2 21.50 43 10 13 0 20
............................................................................................TTTCACAGCCATTTTGACGAGTT..................................................... 23 1 2 21.50 43 5 3 32 3
.................................................................................................CAGCCATTTTGACGAGTT..................................................... 18 0 2 21.00 42 1 9 30 2
............................................................................................TATCACAGCCAATTTGACGAGTT..................................................... 23 1 2 21.00 42 5 12 20 5
............................................................................................TTTCACAGCCATTTTGACGAGT...................................................... 22 1 2 20.50 41 15 17 9 0
............................................................................................TATCCCAGCCATTTTGACGAGTT..................................................... 23 1 2 20.50 41 4 11 14 12
............................................................................................TATCACAGCCATTTAGACGAGTT..................................................... 23 1 2 19.00 38 0 31 6 1
............................................................................................TATCACAGCCATTTTGACGAGTG..................................................... 23 1 2 18.50 37 8 5 20 4
............................................................................................TATGACAGCCATTTTGACGAGT...................................................... 22 1 2 18.50 37 15 13 8 1
...........................................................................................ATATCACAGCCATTTTGACGAGTT..................................................... 24 0 2 18.00 36 1 0 35 0
............................................................................................TATCACAGCCCTTTTGACGATTT..................................................... 23 2 2 17.00 34 0 0 34 0
............................................................................................TAGCACAGCCATTTTGACGAGT...................................................... 22 1 2 17.00 34 12 2 20 0
............................................................................................TATCACAGCCATTTTGACGAT....................................................... 21 1 2 16.50 33 13 2 15 3
............................................................................................TAACACAGCCATTTTGACGAGTT..................................................... 23 1 2 16.50 33 14 10 6 3
............................................................................................TATCACAGCCATTTTGACGAGAT..................................................... 23 1 2 16.50 33 21 4 8 0
............................................................................................TATCACAGCCAGTTTGACGAGTT..................................................... 23 1 2 16.00 32 0 2 28 2
................................................................................................ACAGCCATTTTGACGAGTTA.................................................... 20 1 2 16.00 32 3 28 1 0
............................................................................................TATCACAGCCATTTTGACTAG....................................................... 21 1 2 15.50 31 16 0 13 2
............................................................................................TATCACAGCCATTTTGACGAGTTCA................................................... 25 2 2 14.50 29 2 20 3 4
.............................................................................................ATCACAGCCATTTTGACGATTT..................................................... 22 1 2 14.50 29 0 0 29 0
............................................................................................TATCACAGCCATTTTGAGGAGT...................................................... 22 1 3 14.33 43 28 11 3 1
............................................................................................TATCTCAGCCATTTTGACGAGTT..................................................... 23 1 2 14.00 28 6 18 2 2
............................................................................................TATCACAGCCATTTTGTCGAGTT..................................................... 23 1 2 14.00 28 3 13 5 7
............................................................................................TATCACAGCCTTTTTGACGAGT...................................................... 22 1 2 13.50 27 8 14 2 3
............................................................................................TATCACAGCCATTTTGACGTGTT..................................................... 23 1 2 13.50 27 4 10 6 7
............................................................................................TATCACAGCCATTATGACGAGTT..................................................... 23 1 2 13.50 27 0 8 17 2
............................................................................................TATCACAGCCATTTTGACGAGGT..................................................... 23 1 2 13.00 26 5 4 12 5
............................................................................................TATCACAGCCATTTTGACGAGTTAG................................................... 25 1 2 13.00 26 3 16 6 1
............................................................................................TATCACAGAAATTTTGACGAGT...................................................... 22 2 2 13.00 26 26 0 0 0
............................................................................................TATCACAGCCATTTTGACGAGTTTA................................................... 25 1 2 12.50 25 6 6 7 6
............................................................................................TATCACAGCCATTTTGACCAGTTT.................................................... 24 1 2 12.50 25 1 0 1 23
............................................................................................TATTACAGCCATTTTGACGAGTTA.................................................... 24 2 2 12.50 25 0 22 3 0
............................................................................................TATCACAGCCATTTTGACGATTTA.................................................... 24 2 2 12.50 25 0 2 23 0
............................................................................................TATCACACCCATTTTGACGAG....................................................... 21 1 2 12.00 24 13 5 6 0
............................................................................................TATGACAGCCATTTTGACGAGTT..................................................... 23 1 2 12.00 24 2 9 12 1
.............................................................................................ATCCCAGCCATTTTGACGAGTT..................................................... 22 1 2 12.00 24 0 0 24 0
............................................................................................TATAACAGCCATTTTGAAGAGTT..................................................... 23 2 3 11.67 35 0 0 35 0
............................................................................................TATCACATCCATTTTGACGAG....................................................... 21 1 2 11.50 23 16 1 4 2
............................................................................................TATCACAGCCATTTTGACTAGTTT.................................................... 24 1 2 11.50 23 5 0 2 16
............................................................................................TATCACAGCCATGTTGACGAGTT..................................................... 23 1 2 11.50 23 0 4 19 0
............................................................................................TATAACAGCCATTTTGACGAG....................................................... 21 1 2 11.50 23 13 0 10 0
............................................................................................TATCACAGCCATTGTGACGAGTT..................................................... 23 1 2 11.50 23 1 5 16 1
...........................................................................................ATATCACAGCCATTTTGACGAGT...................................................... 23 0 2 11.00 22 9 4 9 0
............................................................................................TATCACAGCCATTGTGACGAGT...................................................... 22 1 2 11.00 22 5 4 11 2
.......................................................TCGTTAAAATGTTTGTGAACTT........................................................................................... 22 0 1 11.00 11 7 1 3 0
............................................................................................TATCACAGCAATTTTGACGAG....................................................... 21 1 2 11.00 22 21 1 0 0
............................................................................................TATCACCGCCATTTTGACGAG....................................................... 21 1 2 11.00 22 5 0 16 1
............................................................................................TATCACAGCCATTTTGAC.......................................................... 18 0 2 11.00 22 2 1 19 0
............................................................................................CATCACAGCCATTTTGACGAG....................................................... 21 1 2 11.00 22 16 3 3 0
............................................................................................TATCACAACCATTTTGACGAG....................................................... 21 1 2 11.00 22 18 3 0 1
............................................................................................TATCACAGGCATTTTGACGAGT...................................................... 22 1 2 10.50 21 8 10 1 2
.............................................................................................ATCACAGCCATTTTGACGAGG...................................................... 21 1 2 10.50 21 0 0 21 0
...........................................................................................ATATCACAGCCATTTTGACGAG....................................................... 22 0 2 10.00 20 9 5 4 2
............................................................................................TATCACAGCCATTTTGACGAGTAAA................................................... 25 3 2 10.00 20 4 10 5 1
............................................................................................TATCATAGCCATTTTGACGAG....................................................... 21 1 2 10.00 20 10 8 2 0
............................................................................................TATCACAGCGATTTTGACGAGT...................................................... 22 1 2 10.00 20 14 3 1 2
............................................................................................TATCACAGCCATTTTGACAAG....................................................... 21 1 2 10.00 20 15 0 2 3
............................................................................................TATCACAGCCATTTGGACGAGTT..................................................... 23 1 2 10.00 20 2 0 17 1
............................................................................................TATCACAGCCATTTTGACGT........................................................ 20 1 2 9.50 19 12 1 1 5
............................................................................................TATCAAAGCCATTTTGACGAGA...................................................... 22 2 2 9.50 19 18 0 1 0
............................................................................................TATCACACCCATTTTGACGAGTTA.................................................... 24 2 2 9.50 19 1 7 10 1
...........................................................................................GTATCACAGCCATTTTGACGAGT...................................................... 23 1 2 9.00 18 0 0 18 0
............................................................................................TATCACACCCATTTTGACGAGTTT.................................................... 24 1 2 9.00 18 5 1 5 7
............................................................................................TAAAACAGCCATTTTGACGAGT...................................................... 22 2 2 9.00 18 18 0 0 0
.............................................................................................TTCACAGCCATTTTGACGAGTT..................................................... 22 1 2 9.00 18 0 7 11 0
...........................................................................................CTATCACAGCCATTTTGACGAG....................................................... 22 1 2 9.00 18 11 2 4 1
............................................................................................TATCACAGCCTTTTTGACGAGTT..................................................... 23 1 2 9.00 18 2 7 5 4
............................................................................................TATCACAGCCATGTTGACGAGT...................................................... 22 1 2 9.00 18 4 5 5 4
............................................................................................TATCAGAGCCATTTTGACGAGT...................................................... 22 1 2 9.00 18 12 3 1 2
............................................................................................TATCACAGCCATTTTGACCAG....................................................... 21 1 2 9.00 18 10 2 0 6
............................................................................................TATCACAGCCATTTGGACGAGT...................................................... 22 1 2 9.00 18 7 6 3 2
............................................................................................TATCACAGGCATTTTGACGAGTT..................................................... 23 1 2 8.50 17 3 3 6 5
.............................................................................................ATCACACCCATTTTGACGAGTT..................................................... 22 1 2 8.50 17 1 0 15 1
............................................................................................TATCACAGCCATCTTGACGAG....................................................... 21 1 2 8.50 17 9 4 2 2
.............................................................................................ATCACAGCCATTTTGACGA........................................................ 19 0 2 8.50 17 0 0 17 0
............................................................................................TATCACAGCTATTTTGACGAGTTA.................................................... 24 2 2 8.50 17 0 17 0 0
............................................................................................TATCACGGCCATTTTGACGAG....................................................... 21 1 2 8.50 17 13 3 0 1
............................................................................................TATCACAGCCATTTTGACGATTTT.................................................... 24 1 2 8.50 17 2 0 15 0
............................................................................................TATCACAGACATTTTGACGAG....................................................... 21 1 2 8.50 17 9 0 8 0
............................................................................................TATCAAAGCCATTTTGACGAG....................................................... 21 1 2 8.50 17 17 0 0 0
............................................................................................TATCACAGCCATTTTGACAAGTTT.................................................... 24 1 2 8.00 16 0 1 2 13
............................................................................................TATCACAGCCATTTTGACGAC....................................................... 21 1 2 8.00 16 10 2 3 1
............................................................................................TATCACAGCCACTTTGACGAGTTA.................................................... 24 2 2 8.00 16 1 12 2 1
............................................................................................TATCAAAGCCATTTTGACGAGC...................................................... 22 2 2 7.50 15 15 0 0 0
............................................................................................TATCACAGCCATTTTTACGAG....................................................... 21 1 2 7.50 15 9 0 6 0
...........................................................................................TTATCACAGCCATTTTGACGAGT...................................................... 23 1 2 7.50 15 0 0 15 0
............................................................................................TATCAGAGCCATTTTGACGAGTT..................................................... 23 1 2 7.50 15 5 4 4 2
............................................................................................TATCACAGCTATTTTGACGAGTTAA................................................... 25 3 2 7.50 15 0 15 0 0
............................................................................................TATCACCGCCATTTTGACGAGTTA.................................................... 24 2 2 7.50 15 0 1 14 0
............................................................................................TATCACAGCCAGTTTGACGAGT...................................................... 22 1 2 7.50 15 5 2 7 1
............................................................................................TATCACAGCCATTTTGACGAAA...................................................... 22 2 2 7.00 14 11 1 0 2
............................................................................................TATCACAGCGATTTTGACGAGTT..................................................... 23 1 2 7.00 14 4 4 4 2
............................................................................................TATCACAGCCATTTTGACGAGTAT.................................................... 24 1 2 7.00 14 9 0 1 4
............................................................................................TATCACAGCCATTTTGACTAGTTA.................................................... 24 2 2 7.00 14 0 3 11 0
............................................................................................TATCACAGCCATTTTGACGAGTTAAG.................................................. 26 2 1 7.00 7 1 3 3 0
............................................................................................TATCACAGCCATTTTGCCGAG....................................................... 21 1 2 7.00 14 13 1 0 0
............................................................................................TATCACAGCCATTTCGACGAG....................................................... 21 1 2 7.00 14 8 3 2 1
............................................................................................TATCGCAGCCATTTTGACGAG....................................................... 21 1 2 6.50 13 8 3 1 1
.............................................................................................TACACAGCCATTTTGACGAGT...................................................... 21 2 2 6.50 13 6 6 0 1
............................................................................................TATCGCAGCCATTTTGACGAGTTA.................................................... 24 2 2 6.50 13 0 10 1 2
...........................................................................................CTATCACAGCCATTTTGACGAGTTA.................................................... 25 2 2 6.50 13 0 6 6 1
.............................................................................................TTCACAGCCATTTTGACGAGT...................................................... 21 1 2 6.50 13 3 9 0 1
............................................................................................TATCACAGCCATTTTGACGCGTTT.................................................... 24 1 2 6.50 13 3 2 0 8
............................................................................................TATCACAGCCATTTTGACGCG....................................................... 21 1 2 6.50 13 8 1 2 2
............................................................................................TATCACATCCATTTTGACGAGTTA.................................................... 24 2 2 6.00 12 3 7 2 0
............................................................................................TATCACAGCCATTTTGAGGAGTT..................................................... 23 1 3 6.00 18 6 4 2 6
............................................................................................AATCACAGCCATTTTGACGAG....................................................... 21 1 2 6.00 12 7 0 5 0
.............................................................................................ATCACAGACATTTTGACGAGTT..................................................... 22 1 2 6.00 12 0 0 12 0
............................................................................................TATAACAGCCATTTTGACGAGTTT.................................................... 24 1 2 6.00 12 2 0 8 2
................................................................................................ACAGCCATTTTTACGAGT...................................................... 18 1 3 5.67 17 17 0 0 0
..............................................................................................TCACAGCCATTTTGACGAG....................................................... 19 0 2 5.50 11 1 1 9 0
............................................................................................TATCACCGCCATTTTGACGAGTTT.................................................... 24 1 2 5.50 11 0 1 8 2
............................................................................................TATCACAGCCCTTTTGACGATT...................................................... 22 2 2 5.50 11 0 0 11 0
............................................................................................TATCACAGCCACTTTGACGAG....................................................... 21 1 2 5.50 11 5 3 2 1
............................................................................................GATCACAGCCATTTTGACGAG....................................................... 21 1 2 5.00 10 5 0 5 0
............................................................................................TATCACAGCCATTTTGACCAGTTA.................................................... 24 2 2 5.00 10 1 5 2 2
............................................................................................CATCACAGCCATTTTGACGAGTTT.................................................... 24 1 2 5.00 10 1 3 2 4
............................................................................................TATCACAGCCATTTTAACGAG....................................................... 21 1 2 5.00 10 8 0 2 0
.............................................................................................ATCACATCCATTTTGACGAGTT..................................................... 22 1 2 5.00 10 0 0 10 0
............................................................................................TATCACAGCCATTTTGACGAGTTTAA.................................................. 26 2 2 5.00 10 4 2 1 3
............................................................................................TATCACAGTCATTTTGACGAG....................................................... 21 1 2 5.00 10 7 2 1 0
............................................................................................TACCACAGCCATTTTGACGAG....................................................... 21 1 2 5.00 10 9 1 0 0
............................................................................................TATCACAGCCCTTTTGCCGAGT...................................................... 22 2 2 5.00 10 8 2 0 0
................................................................................................ACAGCCATTTTGACGAGTTAA................................................... 21 2 2 5.00 10 0 10 0 0
............................................................................................TATCACAGCCACTTTGACGAGTTT.................................................... 24 1 2 4.50 9 3 1 0 5
.............................................................................................AGCACAGCCATTTTGACGAGTT..................................................... 22 1 2 4.50 9 0 0 9 0
............................................................................................TATCATAGCCATTTTGACGAGTTA.................................................... 24 2 2 4.50 9 0 7 2 0
............................................................................................TATCACCGCCATTTTGACTAGTT..................................................... 23 2 2 4.50 9 0 0 8 1
..........................................................................................TCTATCACAGCCATTTTGACGAGT...................................................... 24 2 2 4.50 9 6 2 0 1
.............................................................................................ATCACAGCCATTTTGACGAGTTAAA.................................................. 25 3 2 4.50 9 0 0 9 0
............................................................................................TATCACAGCCATTTTGACGAGTTGG................................................... 25 1 2 4.50 9 0 0 9 0
............................................................................................TATAACAGCCATTTTGACGAGTTA.................................................... 24 2 2 4.50 9 0 0 9 0
............................................................................................TATCACAGCCCTTTTGACGAG....................................................... 21 1 2 4.50 9 6 1 0 2
............................................................................................TATCACAGCCATTTCGACGAGTTT.................................................... 24 1 2 4.50 9 3 1 0 5
............................................................................................TATCACAGCCATTTTGACGATTTAA................................................... 25 3 2 4.50 9 0 1 8 0
................................................................................................ACAGCCATTTTGACGAGTTT.................................................... 20 0 2 4.50 9 5 2 1 1
.............................................................................................ATCACAGCCATTTTGACGATT...................................................... 21 1 2 4.50 9 0 0 9 0
............................................................................................TATCACAGCTATTTTGACGAG....................................................... 21 1 2 4.50 9 7 1 1 0
............................................................................................TATCACAGCCAGCTTGAGGA........................................................ 20 3 8 4.38 35 22 10 2 1
............................................................................................TATCACAGCCATTTTGACGAGTTAC................................................... 25 2 3 4.33 13 0 10 3 0
............................................................................................TATCACAGCCAGCTTGAGGAGT...................................................... 22 3 3 4.33 13 7 2 1 3
............................................................................................TATCACAGCCACTTTGAGGAG....................................................... 21 2 4 4.25 17 4 2 8 3
........................................................CGTTAAAATGTTTGTGAACTTATG........................................................................................ 24 0 1 4.00 4 1 3 0 0
............................................................................................TATCACAGCCCTTTTGACGAGTTT.................................................... 24 1 2 4.00 8 1 0 1 6
............................................................................................TATAACAGCCATTTTGAAGAGT...................................................... 22 2 3 4.00 12 0 0 12 0
............................................................................................TATCACAGCCGTTTTGACGAG....................................................... 21 1 2 4.00 8 7 1 0 0
............................................................................................TATAATAGCCATTTTGACGAGTT..................................................... 23 2 2 4.00 8 0 0 8 0
............................................................................................TATCACAGACATTTTGACGAGTTA.................................................... 24 2 2 4.00 8 0 3 5 0
............................................................................................TATCACAGCCCTTTTGACGAGTTA.................................................... 24 2 2 4.00 8 0 2 6 0
............................................................................................TATCACAGCCATTTTGACGGG....................................................... 21 1 2 4.00 8 4 0 4 0
............................................................................................TATCACAGCCATTTCGACGAGTTA.................................................... 24 2 2 4.00 8 1 5 0 2
............................................................................................TATCAAAGCCATTTTGACGAGAT..................................................... 23 2 2 4.00 8 8 0 0 0
............................................................................................TATCACAGCCGTTTTGACGAGTTA.................................................... 24 2 2 4.00 8 1 7 0 0
............................................................................................TATCACAGCCATTTTGACGACTTT.................................................... 24 1 2 4.00 8 4 0 3 1
............................................................................................TATCACGGCCATTTTGACGAGTTT.................................................... 24 1 2 4.00 8 3 1 0 4
............................................................................................TATCACAGTCATTTTGACGAGTTA.................................................... 24 2 2 4.00 8 0 8 0 0
............................................................................................TATCGCAGCCATTTTGACGAGTTT.................................................... 24 1 2 4.00 8 5 0 0 3
............................................................................................TATCACAAAAATTTTGACGAGT...................................................... 22 3 2 4.00 8 7 1 0 0
............................................................................................TATCACAGAAATTTTGACGAGTT..................................................... 23 2 2 4.00 8 8 0 0 0
............................................................................................TATCACAGCCATTTTGAAGAG....................................................... 21 1 3 4.00 12 2 1 9 0
............................................................................................TACCACAGCCATTTTGACGAGTTA.................................................... 24 2 2 4.00 8 0 8 0 0
..............................................................................................TATCAGCCATTTTGACGAG....................................................... 19 2 6 3.67 22 13 8 0 1
............................................................................................CATCACAGCCATTTTGACGAGTTA.................................................... 24 2 2 3.50 7 2 5 0 0
............................................................................................TATTACAGCCATTTTGACGAGTTT.................................................... 24 1 2 3.50 7 2 2 1 2
............................................................................................TATCACAGACATTTTGACGAGTTT.................................................... 24 1 2 3.50 7 3 0 3 1

Anti-sense strand reads

CGCCTAGCTTTTTGTATAAAGTATTGGCTGACTTGGCGCAGAAAGAATATGGTACAGCAATTTTACAAACACTTGAATACATAAGCGTTAGTATAGTGTCGGTAAAACTGCTCAAACCCATTTCTTTAGAGTTGTAATTCGCCTACGTAGGACGTCAACAGCTGCTGC

***************************************.((((((.((((...(((((((((((.((((((...((((..........)))))))))).))))))))))).....))))))))))..**************************************** 		Read size # Mismatch Hit Count Total Norm Total M054

female body

 V113

male body
................................................ATGGTACAGCAATTTTACAA.................................................................................................... 20 0 1 1.00 1 1 0
....................................................................................................................................................AGGACGTCAAATGCTACTGC 20 3 4 0.25 1 1 0
...................GGTATTGGCTGATCTGGCG.................................................................................................................................. 19 3 5 0.20 1 0 1
....................GTATTGGCTGATATGGTGC................................................................................................................................. 19 3 9 0.11 1 1 0
...................AGTATTGGCTGATCTGGTG.................................................................................................................................. 19 3 13 0.08 1 0 1
........................GGGCTGACTTGGCTCCGAA............................................................................................................................. 19 3 20 0.05 1 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droSec2 scaffold_0:10705155-10705322 + dse-mir-13b-1 Known_mirbase GCGG---ATCG-----------------------AA------------------------------------------------AA--A-CATATTTCATAACCGA-CTGA----ACCGCGTCTTTCTTATACCATGTCGTTAAAATGTTTGTGAACTTATGT---ATT-CGCAATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCAACATT-AAGCG--------------GATGCA---------------------------------------------------------------TCC---TGCAGTTGT------------------------CGAC-----------------G-----ACG
droSim2 3r:9985708-9985875 + dsi-mir-13b-1 Known_mirbase GCGG---ATCG-----------------------AA------------------------------------------------AA--A-CATATTTCATAACCGA-CTGA----ACCGCGTCTTTCTTATACCATGTCGTTAAAATGTTTGTGAACTTATGT---ATT-CGCAATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCAACATT-AAGCG--------------GATGCA---------------------------------------------------------------TCC---TGCAGTTGT------------------------CGAC-----------------G-----ACG
dm3 chr3R:11243080-11243251 - dme-mir-13b-1 Known_mirbase GCGG---ATCA-----------------------AA------------------------------------------------AA--A-CATATTTCATAACCGA-CTGACTGAACCACGTCTTTCTTATACCATGTCGTTAAAATGTTTGTGAACTTATGT---ATT-CACAATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCAACATT-GAACG--------------GATCTA---------------------------------------------------------------TCC---TGCACTCGT------------------------CGAC-----------------G-----ACG
droEre2 scaffold_4770:10769189-10769391 - der-mir-13b-1 Known_mirbase GCGG---GTTA-----------------------AG-A----------------------------------------------AA--A-CATATTTCAAAAGCGA-TTGA----ACAACGTCTTTCTTATACCATGTCGTTAAAATGTTTGTGAACTTATGT---ATT-CGCAATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCAACAAT-GAGCGC------------------------CACTTA-TG---AGTTACT----T--------------GCAGATCCAC---TTTGCCATCT---TGCATTTGTCGAC-G-----CCCA------------A-----------------T-----ACG
droYak3 3R:15188679-15188820 + dya-mir-13b-1 Known_mirbase ACTT---ATTT---------C------ATGTATTTC------------------------------------------------AA--A-CATATTTCATAATCGA-TTGA----CCCACGTCTTTCTTATACCATGTCGTTAAAATGTTTGTGAACTTATGT---ATT-CGCAATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCAAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409281:109636-109824 + TCTG---GTCA-----------------------AAGT----------------------------------------------TA--T-TATATTTCATAACCGA-TTTA----TTCGCATCTTTCTTATACCATGTCGTTAAAATGTTTGTGACCTTATGT---ATT-CGCAATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCAACATTCGAGCGC------------------------CATTTA-TGAG-AGTTAC-----------------------------------------------------------TTTCAGATCG-ACCAGACGACGTC-----------------A-----ACG
droBia1 scf7180000302136:835387-835544 - GCCG---GTCA-----------------------AA------------------------------------------------AA--T-CGCATTTCGCAACCGT-TCGA----CTCGCATCTTTCTTATACCATGTCGTTAAAATGCTTGTGACCTTATGT---GTT-CGCAATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCAACATT-GGGCGC------------------------CAATTA-TG---AGTT------------------------------------------------------------------------------------------------------------ACT
droTak1 scf7180000415769:1926075-1926266 + GCTG---GGCA---------------------CTAA------------------------------------------------AA--T-CATATTTCGTGACCGT-TCGT----ATCGCATCTTTCTTATACCATGTCGTTAAAATGTTTGTGACCTTATGT---ATT-CGCAATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCAACGTT-GGGCGC------------------------CATTTA-TTAGTAGTTACT----TTTAA-----AA--------------------------------------------CCAGATCC-ACCAGA---CGTC-----------------A-----ACG
droEle1 scf7180000491080:1006946-1007125 - GCAA---CTGG----------------ATAGACATA------------------------------------------------AA--T-CAGTTTTTATAAGCGC-TTGC----TTCGCATCTTTCTTATACCATGTCGTTAAAATGCTTGTGACCTTATGT---ATT-CGCAATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCAACATT-TAGGG-----------------------------------A-AGTTCG-----------------------------------------------------------TTTCACATCA-ACCAGA---CGTC-----------------A-----ACG
droRho1 scf7180000779250:92766-92954 + GCTG---GGCT-----------------------AA------------------------------------------------AA--T-CAAGTTTCATAAGCGA-TTGC----ATCCCATCTTTCTTATACCATGTCGTTAAAATGTTTGTGACCTTATGT---ATT-CGCAATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCAACAGT-GGGCGC------------------------CATTTA-TGGA-AGTTCAGATTCA-----------------------------------------------------TTTCAGATCC-ACCAGA---CGTC-----------------A-----ACG
droFic1 scf7180000452523:592077-592261 - GCTG---GGCA-----------------------AA------------------------------------------------TA--T-CAATTTCCATAACCGA-TTGT----ATCCCATCTTTCTTATACCATGTCGTTAAAATGTTTGTGACCTTATGT---ATC-CACAATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCAACATT-GGGCGC------------------------CATTTC-TTCG-AGTTTCT----T-----------------------------------------------------TTTCAAATCC-AAAAGG---AGTT-----------------A-----ACG
droKik1 scf7180000302639:1443306-1443471 + GCCA---GAAG---------G-------------AG------------------------------------------------TA--C-C--GCTTCGCAA---A-TCAA----ATCGCTTCTTTCTTATACCATGTCGTTAAAATGCTTGTGACCTTATGT---ATT-CGCAATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCAACGTT-GGGCGC------------------------CATTTT-CCAG-AATTC------T-----------------------------------------------------TTACAGATC---------------------------------------CG
droAna3 scaffold_13340:12827460-12827616 - dan-mir-13b-1 Known_mirbase GAAAACCGTCA--GAAAGGG-----------------GCGCGGCGGCAG-------------------------------------------GATGTCATAACCGA-TTGT----GT-TCATCTTTCTTATACCATGTCGTTAAAAGGCTTGTGACCTTATGT---ATTTCGCAATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCACCATT-----------------------------------------------------------------------------------------------------------------------------------C-----------------G-----ACG
droBip1 scf7180000396691:1710343-1710506 - TCGC---ATCGTGGGGCG--------------CG---GC---------------------------------------------AG--G-C-GATTTCGTAACCGA-TTGT------TCCGTCTTTCTTATACCATGTCGTTGAAAGGCTTGTGACCTTATGT---AGTTCGCAATCATATCACAGCCATTTTGACGAGTTTGGGCAAAGAAATGTCACCATT-TCG--------------------------------------------------------------------------------------------------------------AT---ACCATA--CCGTT-----------------G-----ACG
dp5 2:9825024-9825253 + dps-mir-13b-1 Known_mirbase GCAATCCATCATCGATCGGG-----------------GCAG---GGCAGGATGGAGCA---------------------------------------CAG-AGTGG-ACGG----AAAGCATCTTTCTTATACCATGTCGTTAAAATGTTTGTGACCTTATGT---ACTCTTGAATCATATCACAGCCATTTTGACGAGTTTGGGTACAGAAATTTCAACATA-AAATGC------------------------CCCCTTAACAAT---CCA--TTCT-----------------------------------------------------TTTCAGATCCGATCCGATCCATTCCCCGGGAGAAAAATGATGACGGGCTG
droPer2 scaffold_0:10659842-10660071 - dpe-mir-13b-1 Known_mirbase GCAATCCATCATCGATCGGG-----------------GCAG---GGCAGGATGGAGCA---------------------------------------CAG-AGTGG-ACGG----AAAGCATCTTTCTTATACCATGTCGTTAAAATGTTTGTGACCTTATGT---ACTCTTGAATCATATCACAGCCATTTTGACGAGTTTGGGTACAGAAATTTCAACATG-AAATGC------------------------CCCCTTAACAAT---CCA--TTCT-----------------------------------------------------TTTCAGATCCGATCCGATCCATTCCCCGGGAGAAAAATGATGACGGGCTG
droWil2 scf2_1100000004902:2142997-2143199 - dwi-mir-13b-1 Known_mirbase TCGA---AATG---------G------ATGG---------TATCCT--------------------------------------TA--G---A-----ATATGTGA-ATTG----ACTGCAACTTTCTTATACCATGTCGTTAAAATGTTTGTGACTTTATGTTGTGTC-TCTATTCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCAACATT-GT----------------------------------------AGTTCCT----ATTTACGACCAACCAGCCAGTCAACCGGATAACCATCCTCATCCAC------------------------------TT-----------------G-----ATG
droVir3 scaffold_13047:13335740-13335909 + dvi-mir-13b-1 Known_mirbase GCAG---AATG---------GGCTGGCAAGGACGAT------------------------------------------------TA--T-CGTTT------------TTGC----ATTGCAATTTTCTTATACCATGTCGTTAAAATGCCTGTGACCTTATGT---ATT-TTATATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCAACAGA-GCACACATAATGTGTGCGACGT---------------------GTACA-----------------------------------------------------------TG-----------------------------------------------C
droMoj3 scaffold_6540:10568466-10568651 + dmo-mir-13b-1 Known_mirbase CTGG---ATTA-----------------TCCACCTC------------------------------------------------AATCTCC-ATCTTCATTTGCAT-TCGA----ATTGCAATTTTCTTATACCATGTCGTTAAAATGTCTGTGACCGTATGT---ATT-CACTATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCAACAGA-GCTCGCGTTACGCGTCCGACATGTA---------------------------------------------------------------TGT---TGTACT----------------------------AAT-----------------T-----ATA
droGri2 scaffold_14906:4357448-4357648 - dgr-mir-13b-1 Known_mirbase GGG-------------------------------------------CCGGTTCGTGCAGTCGCCGCCTCCTCCTGTTCCTCCTCCTTCTCC-TTTG-------TGTGTTTC----TTTCTTTCTTTCTTATACCATGTCGTTAAAATGCTTGTGACCTTATGT---ATT-TTATATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATGTCAACAGA-AAACA--------------GAAAAAAAATGCATTTA-CAAA-TGTACA-----------------------------------------------------------TT---------------------------------------------TCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSec2
GCGG---ATCG-----------------------AA------------------------------------------------AA--A-CATATTTCATAACCGA-CTGA----ACCGCGTCTTTCTTATACCATGTCGTTAAAATGTTTGTGAACTTATGT---ATT-CGCAATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCAACATT-AAGCG--------------GATGCA---------------------------------------------------------------TCC---TGCAGTTGT------------------------CGAC-----------------G-----ACGSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGT.....................................................................................................................................................................................222133059.00266118149332542674068151691
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTT....................................................................................................................................................................................23279718.0015943653359306864036235029
..................................................................................................................................................................................TATCACAGCCATTTTGACGAG......................................................................................................................................................................................2127510.00150201879702132011119
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTT...................................................................................................................................................................................2423517.507035117431605112190
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTA...................................................................................................................................................................................2423292.00658418024213866495
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTT....................................................................................................................................................................................2222016.0040323873396555
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAA..................................................................................................................................................................................2521337.002674570931869142
......................................................................................................................................................................................ACAGCCATTTTGACGAGT.....................................................................................................................................................................................182682.501365215512836
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGT.....................................................................................................................................................................................212563.0011269651922120
..................................................................................................................................................................................TATCACAGCCATTTTGACGA.......................................................................................................................................................................................202557.0011141442856886
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGA.....................................................................................................................................................................................222345.50691686434525
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGC.....................................................................................................................................................................................222234.004682250140256
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAAA.................................................................................................................................................................................262223.504471631321754
.........................................................................................................................................TCGTTAAAATGTTTGTGAACTTATG...........................................................................................................................................................................................................................251207.002076317226
......................................................................................................................................................................................ACAGCCATTTTGACGAGTT....................................................................................................................................................................................192206.504132915207162
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTA....................................................................................................................................................................................232204.00408967591146
..................................................................................................................................................................................TATCACAGCCATTTTGACG........................................................................................................................................................................................192192.003849018285
....................................................................................................................................................................................TCACAGCCATTTTGACGAGTT....................................................................................................................................................................................212120.0024017245212
....................................................................................................................................................................................TCACAGCCATTTTGACGAGT.....................................................................................................................................................................................20297.001944749053
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTG...................................................................................................................................................................................24296.501935785474
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTC...................................................................................................................................................................................24271.5014353222642
...................................................................................................................................................................................ATCACAGCCATTTTGACGAG......................................................................................................................................................................................20266.00132124305
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTAA...................................................................................................................................................................................24261.501236326223
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTC....................................................................................................................................................................................23259.5011921343133
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTG..................................................................................................................................................................................25259.0011819254628
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTA...................................................................................................................................................................................23255.50111108030
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGG.....................................................................................................................................................................................22247.50951482350
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTT...................................................................................................................................................................................23247.009490202
..................................................................................................................................................................................TATCACAGCCATTTTGACGAA......................................................................................................................................................................................21230.506168047
.....................................................................................................................................................................................CACAGCCATTTTGACGAGTT....................................................................................................................................................................................20229.505941963
.........................................................................................................................................TCGTTAAAATGTTTGTGAACT...............................................................................................................................................................................................................................21126.002610421
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAT..................................................................................................................................................................................25225.005015431
.....................................................................................................................................................................................CACAGCCATTTTGACGAGT.....................................................................................................................................................................................19223.00461431316
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTAA..................................................................................................................................................................................24222.504544001
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTT..................................................................................................................................................................................25222.0044918512
.......................................................................................................................................................................................CAGCCATTTTGACGAGTT....................................................................................................................................................................................18221.004230291
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTG....................................................................................................................................................................................23218.503720458
.................................................................................................................................................................................ATATCACAGCCATTTTGACGAGTT....................................................................................................................................................................................24218.003635001
..................................................................................................................................................................................TATCACAGCCATTTTGACGAT......................................................................................................................................................................................21216.5033153213
......................................................................................................................................................................................ACAGCCATTTTGACGAGTTA...................................................................................................................................................................................20216.003210283
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTCA..................................................................................................................................................................................25214.502934202
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTA..................................................................................................................................................................................25212.50257666
.................................................................................................................................................................................ATATCACAGCCATTTTGACGAGT.....................................................................................................................................................................................23211.00229049
.........................................................................................................................................TCGTTAAAATGTTTGTGAACTT..............................................................................................................................................................................................................................22111.00113017
..................................................................................................................................................................................TATCACAGCCATTTTGAC.........................................................................................................................................................................................18211.002219012
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGG.....................................................................................................................................................................................21210.502121000
.................................................................................................................................................................................ATATCACAGCCATTTTGACGAG......................................................................................................................................................................................22210.00204259
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTAAA..................................................................................................................................................................................25210.002051104
..................................................................................................................................................................................TATCACAGCCATTTTGACGT.......................................................................................................................................................................................2029.501915112
...................................................................................................................................................................................ATCACAGCCATTTTGACGA.......................................................................................................................................................................................1928.501717000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAC......................................................................................................................................................................................2128.001631210
..................................................................................................................................................................................TATCACAGCCATTTTGACGAAA.....................................................................................................................................................................................2227.001402111
....................................................................................................................................................................................TCACAGCCATTTTGACGAG......................................................................................................................................................................................1925.50119011
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTAA.................................................................................................................................................................................2625.00101324
......................................................................................................................................................................................ACAGCCATTTTGACGAGTTAA..................................................................................................................................................................................2125.001000100
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTAAA.................................................................................................................................................................................2524.5099000
......................................................................................................................................................................................ACAGCCATTTTGACGAGTTT...................................................................................................................................................................................2024.5091125
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAC..................................................................................................................................................................................2534.331330100
..........................................................................................................................................CGTTAAAATGTTTGTGAACTTATG...........................................................................................................................................................................................................................2414.0040031
droSim2
GCGG---ATCG-----------------------AA------------------------------------------------AA--A-CATATTTCATAACCGA-CTGA----ACCGCGTCTTTCTTATACCATGTCGTTAAAATGTTTGTGAACTTATGT---ATT-CGCAATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCAACATT-AAGCG--------------GATGCA---------------------------------------------------------------TCC---TGCAGTTGT------------------------CGAC-----------------G-----ACGSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTT....................................................................................................................................................................................232545309.00109061817165671161403025186880831798138027915658711840841217141472043212984138
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGT.....................................................................................................................................................................................22275694.0015138848015101986119441632595420404206621079988722174841658157251145
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTA...................................................................................................................................................................................24264630.50129261105125229400166461986746358386683806116222199000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAA..................................................................................................................................................................................25245092.509018530142192700631573763635634779265550711015000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAAA.................................................................................................................................................................................26230397.506079500447690073808103262961720788181304000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAG......................................................................................................................................................................................21213273.5026547357139652113443154121364964181731481005301534130114
..................................................................................................................................................................................TATCACAGCCATTTTGACGA.......................................................................................................................................................................................2026109.0012218235171483197672968379002902462099639106
......................................................................................................................................................................................ACAGCCATTTTGACGAGTT....................................................................................................................................................................................1925143.50102878819620102738147314958010046000
..................................................................................................................................................................................TATCACAGCCATTTTGAC.........................................................................................................................................................................................1823814.0076287799617285622262938106004001
..................................................................................................................................................................................TATCACAGCCATTTTGACG........................................................................................................................................................................................1923487.006974175292413399638944310147803000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTT...................................................................................................................................................................................2423450.006900321449147729141089107167045160121718132010
.........................................................................................................................................................................................GCCATTTTGACGAGTT....................................................................................................................................................................................1622732.005464000000153167184874873000000
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTT....................................................................................................................................................................................2222502.005004202290652525266123722731702665000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTA....................................................................................................................................................................................2321873.003746523860093011268805567933244000
......................................................................................................................................................................................ACAGCCATTTTGACGAGT.....................................................................................................................................................................................1821588.50317732230622333272939200000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGA.....................................................................................................................................................................................2221024.002048481004000706623345203343522000
......................................................................................................................................................................................ACAGCCATTTTGACGAGTTA...................................................................................................................................................................................2021018.0020360120005313126916111400000
.........................................................................................................................................................................................GCCATTTTGACGAGT.....................................................................................................................................................................................152898.001796000000595975141589000000
........................................................................................................................................................................................AGCCATTTTGACGAGTT....................................................................................................................................................................................172779.501559000000135164148341078000000
......................................................................................................................................................................................ACAGCCATTTTGACGAGTTAA..................................................................................................................................................................................212749.001498002200341113511023200000
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGT.....................................................................................................................................................................................212467.00934601753454131849541502001
........................................................................................................................................................................................AGCCATTTTGACGAGT.....................................................................................................................................................................................162447.5089500000056497318699000000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTAA...................................................................................................................................................................................242437.008741141400831223122405320222000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTAAA..................................................................................................................................................................................252433.50867100170010813736921617200000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGG.....................................................................................................................................................................................222391.0078234051209500815731812600000
.......................................................................................................................................................................................CAGCCATTTTGACGAGTT....................................................................................................................................................................................182385.5077100364210201020691410000
.........................................................................................................................................................................................GCCATTTTGACGAGTTA...................................................................................................................................................................................172372.50745000000182112560521000000
.........................................................................................................................................TCGTTAAAATGTTTGTGAACT...............................................................................................................................................................................................................................211300.0030027431800500000000000
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTA...................................................................................................................................................................................232286.5057300017400385116513112110000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTAAA................................................................................................................................................................................272280.00560000500968921414411010000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGC.....................................................................................................................................................................................222255.50511263265319009887506800000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTG....................................................................................................................................................................................232215.5043113310001721935140210000
......................................................................................................................................................................................ACAGCCATTTTGACGAGTTAAA.................................................................................................................................................................................222202.00404000100233362302100000
.......................................................................................................................................................................................CAGCCATTTTGACGAGT.....................................................................................................................................................................................172197.5039500000037104371000000
....................................................................................................................................................................................TCACAGCCATTTTGACGAGTT....................................................................................................................................................................................212178.00356000147042776218611020000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTC....................................................................................................................................................................................232173.503471998180077622317882303000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTG...................................................................................................................................................................................242154.003085236261003587604700000
..........................................................................................................................................................................................CCATTTTGACGAGTT....................................................................................................................................................................................152152.5030500000074713714109000000
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTAA..................................................................................................................................................................................242150.50301000130001313617310100000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTAA.................................................................................................................................................................................262148.0029600080029201271027210000
.....................................................................................................................................................................................CACAGCCATTTTGACGAGTT....................................................................................................................................................................................202121.00242200196411162112145501000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTC...................................................................................................................................................................................242116.00232203270036255138311801000
......................................................................................................................................................................................ACAGCCATTTTGACGAGTTT...................................................................................................................................................................................202114.502290000000000229000000
......................................................................................................................................................................................ACAGCCATTTTGACGAG......................................................................................................................................................................................172110.002200000000000220000000
...................................................................................................................................................................................ATCACAGCCATTTTGACGAG......................................................................................................................................................................................20299.5019930090148810003000000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAC......................................................................................................................................................................................21298.00196167131600000000000000
.........................................................................................................................................TCGTTAAAATGTTTGTGAACTT..............................................................................................................................................................................................................................22197.00978001300100020100000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTA..................................................................................................................................................................................25293.00186000500141961659625000
........................................................................................................................................................................................AGCCATTTTGACGAGTTA...................................................................................................................................................................................18292.00184000000918621580000000
.......................................................................................................................................................................................CAGCCATTTTGACGAG......................................................................................................................................................................................16273.501470000000000147000000
.........................................................................................................................................................................................GCCATTTTGACGAGTTT...................................................................................................................................................................................17271.001420000002130136000000
........................................................................................................................................................................................AGCCATTTTGACGAG......................................................................................................................................................................................15268.501370000001103132000000
.........................................................................................................................................TCGTTAAAATGTTTGTGAACTTATG...........................................................................................................................................................................................................................25166.00663017400002303700000
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTAAA.................................................................................................................................................................................25259.0011800038008939176010000
....................................................................................................................................................................................TCACAGCCATTTTGACGAGT.....................................................................................................................................................................................20251.5010300248041312261600000
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTT...................................................................................................................................................................................23250.00100000688832253001000
........................................................................................................................................................................................AGCCATTTTGACGAGTTAA..................................................................................................................................................................................19348.67146000000117611453000000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTG..................................................................................................................................................................................25239.007830108223610172600000
.........................................................................................................................................................................................GCCATTTTGACGAGTTAA..................................................................................................................................................................................181336.54475000000897352333000000
.....................................................................................................................................................................................CACAGCCATTTTGACGAGT.....................................................................................................................................................................................19235.5071001204013054600000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAT..................................................................................................................................................................................25235.007000060047211910300000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAA......................................................................................................................................................................................21234.00681203005326213112000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTCA..................................................................................................................................................................................25232.006400210075151931200000
.......................................................................................................................................................................................CAGCCATTTTGACGAGTTA...................................................................................................................................................................................19230.5061000000103750000000
.......................................................................................................................................................................................CAGCCATTTTGACGAGTTAA..................................................................................................................................................................................20229.5059000000205646000000
.................................................................................................................................................................................ATATCACAGCCATTTTGACGAGTT....................................................................................................................................................................................24229.50590003120210180410000
...................................................................................................................................................................................ATCACAGCCATTTTGACGA.......................................................................................................................................................................................19229.00580005163610000000000
..................................................................................................................................................................................TATCACAGCCATTTTGA..........................................................................................................................................................................................17426.0010400000012165962000000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAAC.................................................................................................................................................................................26222.00440001001322132200000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTCT..................................................................................................................................................................................25222.00440000001182050000000
..........................................................................................................................................................................................CCATTTTGACGAGTTA...................................................................................................................................................................................16321.33640000007724719000000
..................................................................................................................................................................................TATCACAGCCATTTTGACGG.......................................................................................................................................................................................20221.0042343310001000000000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTATA.................................................................................................................................................................................26220.00400000002819100100000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTGA..................................................................................................................................................................................25219.5039000100221668400000
.....................................................................................................................................................................................CACAGCCATTTTGACGAGTTA...................................................................................................................................................................................21219.5039000100156817100000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTGA.................................................................................................................................................................................26219.50390000001414920000000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTCA...................................................................................................................................................................................24219.00380000002415142100000
....................................................................................................................................................................................TCACAGCCATTTTGACGAGTTA...................................................................................................................................................................................22218.5037000100039726000000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAC..................................................................................................................................................................................25318.33550005000415237100000
.........................................................................................................................................TCGTTAAAATGTTTGTGAACTTATGA---.......................................................................................................................................................................................................................26118.0018101700000000000000
...................................................................................................................................................................................ATCACAGCCATTTTGACG........................................................................................................................................................................................18216.00320000102200000000000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTACA.................................................................................................................................................................................26315.67470002007417170000000
.........................................................................................................................................TCGTTAAAATGTTTGTGAACC...............................................................................................................................................................................................................................21115.0015150000000000000000
.........................................................................................................................................TCGTTAAAATGTTTGTGAAC................................................................................................................................................................................................................................20115.0015111100200000000000
...........................................................................................................................................................................................CATTTTGACGAGTTT...................................................................................................................................................................................15214.5029000000123320000000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTCAA..................................................................................................................................................................................25214.5029010200331271000000
.................................................................................................................................................................................ATATCACAGCCATTTTGACGAG......................................................................................................................................................................................22213.502730340011106800000
......................................................................................................................................................................................ACAGCCATTTTGACGA.......................................................................................................................................................................................16413.0052000000200050000000
.........................................................................................................................................TCGTTAAAATGTTTGTGAACTTATGG---.......................................................................................................................................................................................................................26112.0012001100000000100000
......................................................................................................................................................................................ACAGCCATTTTGACGAGTAA...................................................................................................................................................................................20212.0024000000000222000000
dm3
GCGG---ATCA-----------------------AA------------------------------------------------AA--A-CATATTTCATAACCGA-CTGACTGAACCACGTCTTTCTTATACCATGTCGTTAAAATGTTTGTGAACTTATGT---ATT-CACAATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCAACATT-GAACG--------------GATCTA---------------------------------------------------------------TCC---TGCACTCGT------------------------CGAC-----------------G-----ACGSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTT....................................................................................................................................................................................2325329820.5010659641350130177113162128172163108142107521228826163703920683235063539615028371302492937764813360513978994150611683070021043233352430541425117375073229621599617196343303893840321232871188627210804310506400114000000000000000001099811511876689072273805771410724792821837866444205342528107329911881281276932281875133744654410829812234178413368536080529071376641222153467125633649117551919104180451073118662869837783568205461715272032952351438773170614486155001640413331144904820829691379532192620723243923846548083231632836442102958242501367356718934551411762148150100527534753490483238284273129323781764311075736765111691949910325626966835294110552451918418825478591634156271129667595187442670589543207926454796729912202212787243883106166815198271154493736910681941562407912582996267935622284093610009148934410431449698741988922654934526808557664232124367961917734758899819873158354001413241912539760501281999146980450612969011124232211716658728238510323711880320775963252819509762423523336981485822941380841145767232575886796675880526074275972389427715442873721113268126205225277172134694162576944516105815814504471592910546745229935913098814844323583721093561609209459771291251356829868636721357562725895513124693228114860198944506234864254345765965905187033137212854872215
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGT.....................................................................................................................................................................................2222695721.0053914420020353688410510920645121321465661343609601076187968171454032222562211672959104893051401044517156859797430450711401821212747537627216905369150791015213014134577427398917333797240457224600000000000000000392140353251309810012480762297235541871251926062413808952497185108021311156336620414419672231120221913774687712643137512962391134610721633100286224583445530679665174221142556873072751147894748704483013284658514223190757371224917683240601252272971291911894998997991283711488155851535983931061513854734816007971644333068129821557801076848256872106793301003219913142187182458352344010528759579383242803802116384981578110417243888344897555530100161991398935920423272504920970166902405328573637864533456327113050137653667200613661604480686776107139700745388981062929726966145441250452141317581661682412953831117584225347202186031308516655187309279184361804463932683615107172564778790702668732129126491358372127142422116362463202858731472583365625119898123442144491964526312836344782435093435948151268713458961404072130303556611871228941974547410129531604710235943967551819641858384030762177247017347221123754776756653048847241422032644552840354513824109421170491724238046284012483244630101982232791126969105278527
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTA...................................................................................................................................................................................242232729.504654590000106525337170617510700264754195803400000000031054950313523297922031733111954331214273961316199515911226118752803600000000000000000000094967589210794325234181037126352619252135628063731619678188227408337193615023289633270636349160143115957048865000016296880413409846903192319217623165332627942194313130619182332123700000298451471741395717427501520113313921175200525743252146694341994533691016360127303026028614661859000002973541281629011127975138010362110436549175552165200311474004223405151102119236006836109385521891554930248741171571258471202371594229427225547592331488488628178634880238481248140874487011908395761454553077101753691264119480813027519817218917571211944127171206452120352329844901035217251521311610427887992122652038611235409138759529973560468965432166403211920253814641169274384850741116212
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTT...................................................................................................................................................................................242163347.50326695001010102114310130025004612411740926270109237242538168180233691375036668213884303343302654596623345144010151124280000000000000000031430425926535914311632163831533207157861741021284382842834903925276151013034546116452281308238561231521012900000030905567866055444152011111036105668911464387139553960120010812075071346601279306424029520320276925610516147092536191669459879681322549129070012294086021675380000052367266109204879309820155692081367203210191853835195103100646460207154100132122713003331406484169636207456441207669125147443141114313287151515824244893957102434075171689203678879556338371190559861939051511849042691486819431172209524825351585108113101293112553952641425915263775697418134076927323012965943081422630033133782257223483944043575452824422634043174280129620514105170011231415143013924352355398665745601215
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAA..................................................................................................................................................................................252121067.0024213400003310893359000110000013444012100020000000545254165728106300609984811837360489412721449239283122000000000000000000000001675702071921635471192421211114071519117225215722366952752817424482451113450145000002090172000052344100358399143202301223613679122522914149559513542796359000004806102302644031001218119022036017747490322341776188172719246572158379000001904462525324115115883920725110926562721214717799414330312851005810002962382772141442010171050111891029161426342162628629748186212820643889272873470202363586973208830251086876411182322171718167053913224627729371072932101508113473019418939976424139071105774932714951147310663450277961891839965303050491750
..................................................................................................................................................................................TATCACAGCCATTTTGACGAG......................................................................................................................................................................................212106682.002133640000961617251027276138900591004810029213401436375983118910865951272122624232132701103675532612102575120127170942624514856446126555472700000000000000000569547456445306224124119250492311361282371512159312402735782826991512622426171034140817365515105567154711624942321146319116816262618268394392485113591744242777499516499437277403393274369509320365271196303003243854421786282437668710528208551121994127766655618151093962796804311907103174193147164183711745300000135297011212030036233820181651334425376610129613064232661591640154843402900820011313857511183021901194767854159651021755157411851393665700569144059747560844415792659981721472849821268834592256125637718092617123543821005347933758164915216232279204721993011411217743723713712042576326660199217148147432554522078692102191534571540521977127158602921254613745624449326910790663965642697534378412111
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAAA.................................................................................................................................................................................26260619.50121239000000351122000000000024127650000000000001124337029100113591358415245151452138343832500000000000000000000000112003171683914492000001004220000014021166710705651262003000000000200000314002086103116068507774902151118202564181751702391300000000003023000012000101000000337568537452351124211970000066522080311000102401519247114110913046805742361993200800002920037101010012108001400230002304105242671478447831667065352523612454150233101020914442553091423277088121590222010219522566540411310130602233728792465722325144
......................................................................................................................................................................................ACAGCCATTTTGACGAGTT....................................................................................................................................................................................19246892.00937840000000000000000000025144064111178521092572172342463363839620913126962534711759158242081061345064028500016000000000000000000232401362232000001212040010130117000561000000004215125339072512855131211800001233305541440436522637812359049156634756056747764484150131932981151413934742902301218328413295113504102549217809524177313830752715514695900000203546510000141190853992952172612341411305684186729049510010000144165141217613816456157375316958181350112187143493752003455002385794662721366432772863409250245352311219332268903319702530985951607701267379194232127161160237172929726308125496265308511141794230917339448621138316217199257109109145371245213666384086672021402940
......................................................................................................................................................................................ACAGCCATTTTGACGAGT.....................................................................................................................................................................................18217071.0034142000000000000000000004370117418386137254243120142146230771426381153153882291551412181751492181090000100000000000000000082187177730000000000000100000000020800000000071181461500501849321370680000000200166317467406266189333266293256294341316301165011009641291076022284365017811332658265345038220192146218562180578000149639600000428801100093110691851218010648321641055012231641000000010011789028711394531088213712493185256101225165209208112198231102334179181603114307351120115937851546969104487610966618332634846115835932022837894188977055536123889181214527126340766811331881006118126655493181813525207439275812028452215
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGC.....................................................................................................................................................................................22214993.0029986000040110403048001307410730082000000003291129525638561211325127115135895610520000000000000000000017812131317107127120031027240026212134235304201145901920080123016042313917000001001012364494451139482729387046835000000411311366341711600135004834231010761171121414239235810211413000808600000193110010023012885503614221310382211190015210015201917881526758583172423160136321891374315850964437126591681533110477544511403216834217432731986275142516733453217177934229825824787741914151341136676486311126311654757220151464868882192603131612227618816223274133832438887381323698162654610
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTT....................................................................................................................................................................................22214625.5029251000020211200030000107103100010810000000121718101373478248606119615460272615930981000000000000000005666445329065726142166021682061815027731089715244230611110102065120401200000023003112313371478285620284249735100000875721385838360181172302302103380201524057928141500110416100000202400000069485255611016209601182112648121411520000151815963934156187481071611434406103382973254553362024412017149613268351264653222390352535128082124491136431443039758728171324247944722962349291331928833373872949136815314501431219510711164217184927306218641029628238
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTC....................................................................................................................................................................................23213964.5027929000050213191011110010025380023000000023964124825415418314474064751150000000000000000000005154312153332311370213400169114474039111001413190104060131805122700001000100312251343318241117272636260000044110142342531017004980100191377168150211123911170001001430000019390010005121204834276521738304172010471030015183362032241040101542123448123842108217665516494227121326777275421543503240525864834773391297710767171181435489601218416534258529115167427420060146291721305178110181219762648084979235797411754161955332242708891781061
..................................................................................................................................................................................TATCACAGCCATTTTGACGA.......................................................................................................................................................................................20211508.5023017000021100001012001000210141301643671915514715162442710118533545147103105282856065014840000000000000000075917564132576152132155014241138213445513832314398100627336363151531090110136614215942121801232186611000307481131398201227281527258515100110037435026431628041101891761191712117071373195195574155208453582079000100690000071300400031373211315729187230016521360912766427914429210009963221913938343375516921147882304438676325542810863438187188512278583010835830107153474112358307431513821618820333520162316119017213242013101515641110452978262191243452750148114377039183933419041985830621022
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGA.....................................................................................................................................................................................2229927.501985500002076101514342800030012212500220000000161315104646941451367414212264911351000000000000000000006768475270805110113261314300549022031151640433271000203141254402001466273518126280000000000511282020417191782516121950000091028341431231220780136113373101373209330739631326319111110070523000007240000005222231716171442565811644351624391001133000710915638743101129118174225752811131821261736930134285306036293413242150512550422923561591231254336151051651241621234418832027445312221150347319185246826372339335414524312201715243723201813302734422393281081360
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTA....................................................................................................................................................................................2329840.00196800000320766405172003103534101026900000001111224532010134819738132150604329380490000000000000000000001510713211101616272252460835300422213172100528516824580113030833101312711000000000097471463926595754472125444418000006433322920143748028102326127345250601646420831445028137300113440017000001567000000169865835423983124817829176802321125515600141142121313191382527441525114237213214444246215444877973916171328858285934276934302108623696217244203234186798576964723817147124471091895254473153838129513628527968110163312817323621559733088302053402148924481261830
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGG.....................................................................................................................................................................................2229586.50191730000100012000100000010720118000000001152120954005418313535211053522120000000000000000000059370404423328101101261013220332293411150450060817030107740162192400000000009444758162220172126204528401200000192318247596071001056211241754485042037261524962400000191300000817002000462724163241833456322151700320000222141175923862949635337476012383452323349381248262610222559718301884218346461389631200832978923914319436382438378393635566181218393113871041179211987692306410182717421330124113234501113585221510631672031371381
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTC...................................................................................................................................................................................2426114.5012229000020000001010000001253000360000000071512894508111622171714960453110000000000000000000000001914109021065125212100345100240172635334021036175020121204316500000000000364439252445474332211645421700000331112131319120300880509013000158702528372343021122402200000222800000068432027977677348712588313014118003344140013725425154182111511183151782361044411131272145214652214319202105926710122741240199731581560241242217269447553518345365139182156818961479511225620447112663439143545521733211441321937561481441730
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTAA...................................................................................................................................................................................2424432.008864000000310101021000008101720011000000078315812326109218512195512140000000000000000000000053550316167375110110621130000011719202411100612200310200160105200000010009879745724425701538511262180000041001110911040076050100110003130101664215634003383261290000055122100000371491371309122181513735190017000061003342017153545741063545100615198113193281427785219373328394092277264386281181211725122039114196581391310151338265214936943107266134134618568313322222492616440
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTATC.................................................................................................................................................................................2624348.008696000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001002000000000000000000000000000000001000000000000000000000000000000000000000001010000100068271851000000000000000000000000000000000000011222000000000000000000200000000000000000000000000000000000
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGT.....................................................................................................................................................................................2124122.00824400000000001100000800204301156000000024261425214514114647710431540121000000000000000001521101818016552502020292500424101920293410700014105303012702011000000000031480529997146351200000410366191314130800818121070840412110033487421010051200000230010003832282418564381121262000200000350221342104115312626331117189261325165206166311265113171316712599169573622523877311193272525143318853235371571753138531528453406121421131491173751304618621111241712392013581671910
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTG....................................................................................................................................................................................2323925.0078500000611311023500000003020040000000107267755296271305016753001110000000000000000000057460002011530201110030000101042322935242092607602020804013400000000104961610714595512173160000056824012624210250031104020182269052422063513511000201570000056000000754355558011101013800400003701815861434934172410844142116143251811221385172293692754363423813229410321378242717613285626163932697225421510722131092471010284226176621043122151071018160
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTG...................................................................................................................................................................................2423487.5069750000000220001420000066300170000000118283972272122155178202618131460153000000000000000000002423151104310001002000000702854150200113011000122000120000002100259083574023163927291317676000002073004301005811501852310006301316191014000339230000024400030001714136188984027778637241915134002800002801015191751984216141729978612102326519174439115244930913744012737314950911831732313319322614282125130286124185348282611312113679011914020292531835301327251214165828301460157123850
......................................................................................................................................................................................ACAGCCATTTTGACGAGTTA...................................................................................................................................................................................2023201.00640200000010000000000000278630001300000004011132771417241515743933463211351300000000000000000000000444400001000000000000100000000000000000061100117200010000000120312613776615784105839963535441900000207330840300320503010013800361139450019668000006417500100041721220171364515117438000010008110111205012011302005226034310312927123310502456942336191714458200011123111200428906180100011261626032300122000100114002120
.....................................................................................................................................................................................CACAGCCATTTTGACGAGTT....................................................................................................................................................................................2022969.00593800000000000001000000470200240000000011401231003200726200000000000000000000000192212220000002000500101010000057690020203001100000101010000000000007200112912221010479200000135282113332010016140002001131701018050001000000000300000021101487643156100160011000045000200111207104242417635342181020741554273969322734146529494390101424717241213193511045241377132910736114568360020003432814559
....................................................................................................................................................................................TCACAGCCATTTTGACGAGTT....................................................................................................................................................................................2122575.0051500000000002001000010025012001501000000021010113242469371000000000000000000000001622117131018165741322143213271521151716375871701852932469521100200101060001100000000000030111245602000000002472611628450410070610030042901518240004040000005800010081121130316926129363910040000790931512122331241014275112812196231243012195261214302738923339725610431015411101678143170090531379185812910716194281115917313171419302161120129221456603323
..................................................................................................................................................................................TATCACAGCCATTTTGACG........................................................................................................................................................................................1922548.505097000000000000001006101513001214524234371103040671232317461000320000000000000000003839273252000254405901165142210280142312910133143280950000151467600231330000212128525169614902140010061634102511330132927625181411112029214813851010000100000000012000007883848151392038382635468122518700002226525712191927410321837671614261918913722372171232282411411348111437623419121573620571372141591314113112887253728047042001806416188869171172702976
..................................................................................................................................................................................TATCACAGCCATTTTGAC.........................................................................................................................................................................................1822347.504695000000000000000000001607000191232621284201000000020301200010000000000000000000000018171970210002300420002232000112660020200000000001312192320911332091000018340100000222300000010000000025094720412731260513200070135900000300010000420000002408154540573831014221040000000022001001003100020210011155614844512021123151121021250152401311030005320100000000000040000000411129
.......................................................................................................................................................................................CAGCCATTTTGACGAGTT....................................................................................................................................................................................1821983.00396600000000000000000000122701002000000004051001530542621103000100000000000000000001611101100001040001000001300100076600001000000000200000000000000000595701587304239168332000001914147855202003106000000123231342826000703120000031020000042193527171214003000011000000052020120200203103020731756116421414252449147746743564435161362111718218627513185529329965221143421092032577734141610121110201122351476289
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTAAA..................................................................................................................................................................................2521499.5029990000001000000000000013700000000000431142501340121533130000000000000000000000000110012122213000000000300000000410001030060000000000200000000000002384427291454061502274000000000000100000001000100000001917211100040250000009530020001011330771152522850500100001002000020011010000010110021022010105274813221204451773112001000334011133464204510110330848173300500902000221332713050150
......................................................................................................................................................................................ACAGCCATTTTGACGAGTTT...................................................................................................................................................................................2021244.502489000000000000000000003500006101000000426210591045715118132000000000000000000000001513178000000000001000000000000000000000000840105847100120000000000323192011826292314311417291100000561025352429010001914012170310123106251116130009112000000131400000013211015167184616731070000000022030121133841613325014312429134318172210465019488230541404310188301511139734101111204103800027429101022121612457015232027210640
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAT..................................................................................................................................................................................2521231.00246200001121000000000000141100000000001332414103010324218111100000000000000000000000013107211381220010011100000072910000100101000000002020000000000013835127482132411093300000400010550200120503050000103149550002111000000122000000040123740151217291541394006743000410001114120214041040512203626252163216702337423951196446041165262111054690172717010626315271321112133038354023332110
......................................................................................................................................................................................ACAGCCATTTTGACGAGTTAA..................................................................................................................................................................................2131195.673587000000000000000000001338100000000000119619065888012116235116100000000000000000000000021000000000000000000000000000000000000010000000000000000000000161181213846382669224048112070000000000020010001010000000010076711500002010000054226000000200412094168746240000000044010000000000200000010000300200101267151374431324734112400000000022200028281800000010620010100010000001231000000
....................................................................................................................................................................................TCACAGCCATTTTGACGAGT.....................................................................................................................................................................................2021176.002352000000000000000000100207007000000011110202000200022100000000000000000000000022112128251761417109909851931621700173261721626247512403303011530203200000000003024001001101000000012511113106902006408000200001919021100000100000005000100342010010152110700000000540558928231357133138995980146320411203117721124106269726627185086411027110018380633013531648119102660791082200191165420257046402
.........................................................................................................................................TCGTTAAAATGTTTGTGAACTTATG...........................................................................................................................................................................................................................2511152.0011520000000210000000000000000002322327100000000000000000000000000000000000000000000000138214115200001100100001370000000005402022000314061620000000000122732000000000000000000000012160882330226324737170000000100000001000000000000000011000000000000000000032181030000230100000310000001000000001000000000122445494832474330000001001000000000000000001501120000000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTA..................................................................................................................................................................................2521019.50203900000000000000000000110000000000005116110583122620282100000000000000000000000211204220452000010000000000022702200100301000000000020000000000002824181659138142310540000000000005040004000404002710046580000050000008200000005000101084111915362840030000100700101000013331031421302313913053212371895931843119017235112302010330631220393115302065828503444201534604170148240
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTA...................................................................................................................................................................................2321015.502031000000000000000000002200001000000000211404010523434400000000000000000000000011000000112000000000000000010200000000300000000000000000000000004701036424120200000000000011000010020000000010114130011023000001110000002010300110411021001000020000000000001100000000001012100207258940326343511417590200001114600202458428010011172934202302110400101411113240
.....................................................................................................................................................................................CACAGCCATTTTGACGAGT.....................................................................................................................................................................................192907.001814000000000000000000001000001100000000010101110000010010000000000000000000000004616002000301001000001101500130001000000020100000000000010000003528037411900010000091713072903002515010200692405021200010000000002000000105135420000200100000000034020001010024111152310014207043102169744137811772061221214222113824307140312356551121417113223224202141315754121135
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTAA.................................................................................................................................................................................262898.0017960000000000000000000004000000000000002200053102046225000000000000000000000000101007340133000000001000000020001000110500001000000000000000000032129542855757031900000000000001010000030000000000007112000001000000810000000050361052157762331000000011070000201000010000000000100000002819764240633802094101013010231010624391529000002322269000101112101201233011270
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTT..................................................................................................................................................................................252814.5016290000000000000000010012100020000000100101018000226545100000000000000000000000648600030063001000012000040392255000000003000000104031000000000007433316882214260000021001105303002103091100016905871020001010000001300000023133121016101519844161000170000000028805042001112111131221431022316942220532510526952188881131244545120103213110171112132981229168227281158509157358334165225250
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTCA..................................................................................................................................................................................252809.501619000000000000000000000100000000000000240111318412437094010000000000000000000000000000121430000000010000010001100000000200100000000030000000000011316713434262452400000000030200000010001000004000171600000000000038000000200150104134009000000001200000010000130400211211010013031433183316645193675205000030631610127232351604000381339103341141200142311342329110
......................................................................................................................................................................................ACAGCCATTTTGACGAGTTAAA.................................................................................................................................................................................223625.0018750000000000000000000046200000000000111160219410707710600000000000000000000000000000000000000000000000000000000000000000000000000000000000000053541314713293161042000000000000000000000000000000000121080000016000001810700000000011003421410642900000000110000000000001000000000000000000010331412332986307204000000000070000051814000000359000000000000001300000000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTCA...................................................................................................................................................................................242514.001028000000100000001000000000001000000001101002200013420120000000000000000000000000000100110000000001000000000000000000300000000100001000000000001232010200212000000100060100000000000000000002111200000410000066000000000220010042105000000000100000100000010000101102000011011302522012333206982021010011146002155181090000031059100111101000100100007100
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGGC....................................................................................................................................................................................232418.5083700000000000000000000000000000000000000001000010010201000000000000000000000000000000000107000000000000000101000000000000000000000000000000000000001110020100000000000000010000000101100010600000000000000000100000000000030001000000000000010100000000003011010210200002101011151111261921313938410212332119101129301111130100000000000000000000001000000
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTAA..................................................................................................................................................................................242415.0083000000002000000000000000000000000001001001210120030000000000000000000000000000000031414000000000000000000000000010010000000000000000000000000550020000001000000000000000000000000000000000000020000004000000400000000000000002000000000000400000000000100000001000001000000033267281372016542300000000091000261721200000101221100000000000000421000010
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAC..................................................................................................................................................................................253398.671196000000100000000000003100000000000090011202723013303491021000000000000000000000002112010154000000000000000001300200001000000000000002000000000001143253081502431000000000100100000000000000010000140201010010000013200000000004201510873213200312340000200000000001020100101110213131010331442283347714433100100004130001751935803000171120310110002100103350000140
..................................................................................................................................................................................TATCACAGCCATTTTGACGATC.....................................................................................................................................................................................222373.5074700000000000000000000000000200000000010101500002010207000000000000000000000001000000000000000000000000000010000000002231502042066210024900010000000011000000000000000010110211220300199010012017700020269001000000000000010000000312101000000000000096000002110211400010210703111034020200170417080220713291001805283311020000000000001000100000000010
droEre2
GCGG---GTTA-----------------------AG-A----------------------------------------------AA--A-CATATTTCAAAAGCGA-TTGA----ACAACGTCTTTCTTATACCATGTCGTTAAAATGTTTGTGAACTTATGT---ATT-CGCAATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCAACAAT-GAGCGC------------------------CACTTA-TG---AGTTACT----T--------------GCAGATCCAC---TTTGCCATCT---TGCATTTGTCGAC-G-----CCCA------------A-----------------T-----ACGSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGT.....................................................................................................................................................................................222207052.00414104440434395277541888723598275583287
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTT....................................................................................................................................................................................232132507.00265014996685397627535300309044056631847
..................................................................................................................................................................................TATCACAGCCATTTTGACGAG......................................................................................................................................................................................21213425.00268504433182130211254641869213
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTT...................................................................................................................................................................................2424408.00881627903491057127102551240
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTT....................................................................................................................................................................................2224128.5082577230437865365458
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTA...................................................................................................................................................................................2423105.5062113292179722264356276204
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGC.....................................................................................................................................................................................2222528.0050564243272560315701
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGT.....................................................................................................................................................................................2121751.003502294728168252350
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTC....................................................................................................................................................................................2321410.0028205522067182449515
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAA..................................................................................................................................................................................252985.5019711490271381412956
..................................................................................................................................................................................TATCACAGCCATTTTGACGA.......................................................................................................................................................................................202924.50184928659176134137319
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTA....................................................................................................................................................................................232473.009462371031311735063
......................................................................................................................................................................................ACAGCCATTTTGACGAGT.....................................................................................................................................................................................182397.5079591186190154840
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGA.....................................................................................................................................................................................222369.50739116731526234860
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAAA.................................................................................................................................................................................262275.0055050826010114
....................................................................................................................................................................................TCACAGCCATTTTGACGAGTT....................................................................................................................................................................................212256.00512331850682953
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGG.....................................................................................................................................................................................222194.503892610491102471
..................................................................................................................................................................................TATCACAGCCATTTTGACG........................................................................................................................................................................................192194.003881141742223910
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTG...................................................................................................................................................................................242182.0036417720712151267
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTG....................................................................................................................................................................................232169.5033937513632390
.........................................................................................................................................TCGTTAAAATGTTTGTGAACTTATG...........................................................................................................................................................................................................................251168.00168111511451220
....................................................................................................................................................................................TCACAGCCATTTTGACGAGT.....................................................................................................................................................................................202164.003281174511741440
...................................................................................................................................................................................ATCACAGCCATTTTGACGAG......................................................................................................................................................................................202146.5029327310000100
......................................................................................................................................................................................ACAGCCATTTTGACGAGTT....................................................................................................................................................................................192136.5027331173641377239
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTC...................................................................................................................................................................................242125.002501105533233224
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTA...................................................................................................................................................................................232124.502492282001000
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTT...................................................................................................................................................................................232119.50239232410200
.................................................................................................................................................................................ATATCACAGCCATTTTGACGAGTT....................................................................................................................................................................................24296.001927920002109
.....................................................................................................................................................................................CACAGCCATTTTGACGAGTT....................................................................................................................................................................................20291.5018360312291168
.....................................................................................................................................................................................CACAGCCATTTTGACGAGT.....................................................................................................................................................................................19281.501633438087760
.........................................................................................................................................................................................GCCATTTTGACGAGTT....................................................................................................................................................................................16280.00160000000160
..................................................................................................................................................................................TATCACAGCCATTTTGACGAT......................................................................................................................................................................................21276.001524863151790
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTAA...................................................................................................................................................................................24262.5012547270414330
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTAA..................................................................................................................................................................................24255.00110109100000
.......................................................................................................................................................................................CAGCCATTTTGACGAGTT....................................................................................................................................................................................18252.00104277002662
.................................................................................................................................................................................ATATCACAGCCATTTTGACGAGT.....................................................................................................................................................................................23243.5087368041380
.........................................................................................................................................TCGTTAAAATGTTTGTGAACT...............................................................................................................................................................................................................................21142.004235100330
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTT..................................................................................................................................................................................25239.50792932128160
.................................................................................................................................................................................ATATCACAGCCATTTTGACGAG......................................................................................................................................................................................22234.0068613091390
.........................................................................................................................................TCGTTAAAATGTTTGTGAACTT..............................................................................................................................................................................................................................22134.003453000260
..................................................................................................................................................................................TATCACAGCCATTTTGACGAC......................................................................................................................................................................................21233.5067450010120
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGG.....................................................................................................................................................................................21232.506565000000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAT..................................................................................................................................................................................25226.5053260006417
..........................................................................................................................................................................................CCATTTTGACGAGTT....................................................................................................................................................................................15226.005200000052
..................................................................................................................................................................................TATCACAGCCATTTTGACGAA......................................................................................................................................................................................21224.0048103020330
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTAAA.................................................................................................................................................................................25220.504138000003
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGC.....................................................................................................................................................................................21217.003423200000
........................................................................................................................................................................................AGCCATTTTGACGAGTT....................................................................................................................................................................................17215.503100000031
..................................................................................................................................................................................TATCACAGCCATTTTGAC.........................................................................................................................................................................................18215.503113801072
....................................................................................................................................................................................TCACAGCCATTTTGACGAG......................................................................................................................................................................................19214.502918301070
..................................................................................................................................................................................TATCACAGCCATTTTGACGATC.....................................................................................................................................................................................22213.502702502000
..................................................................................................................................................................................TATCACAGCCATTTTGACGT.......................................................................................................................................................................................20211.502331101440
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTAAA..................................................................................................................................................................................25311.333429201110
....................................................................................................................................................................................TCACAGCCATTTTGACGAGTTT...................................................................................................................................................................................22210.002014100050
....................................................................................................................................................................................TCACAGCCATTTTGACGAGTTA...................................................................................................................................................................................22210.002013700000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTA..................................................................................................................................................................................25210.00207302242
droYak3
ACTT---ATTT---------C------ATGTATTTC------------------------------------------------AA--A-CATATTTCATAATCGA-TTGA----CCCACGTCTTTCTTATACCATGTCGTTAAAATGTTTGTGAACTTATGT---ATT-CGCAATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCAAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTT....................................................................................................................................................................................23284944.501698893087811550854129056315114279809874596
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGT.....................................................................................................................................................................................22269072.50138145111021593363993347214521243326622121479
..................................................................................................................................................................................TATCACAGCCATTTTGACGAG......................................................................................................................................................................................2124102.0082046802618171519603876491900050
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTT....................................................................................................................................................................................2223758.5075170679363533828110009
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGC.....................................................................................................................................................................................2223341.006682674563175726152180000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTA...................................................................................................................................................................................2422523.5050472176022148584393770000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTC....................................................................................................................................................................................2322006.0040126193906181142100000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTT...................................................................................................................................................................................2421937.503875717944792242744826150000
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGT.....................................................................................................................................................................................2121086.002172017973301691440002
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAA..................................................................................................................................................................................252860.001720064666936948240000
......................................................................................................................................................................................ACAGCCATTTTGACGAGT.....................................................................................................................................................................................182425.008501154033916828160000
.........................................................................................................................................TCGTTAAAATGTTTGTGAACTTATG...........................................................................................................................................................................................................................251378.0037813309591410000
....................................................................................................................................................................................TCACAGCCATTTTGACGAGTT....................................................................................................................................................................................212257.50515038011944170000
..................................................................................................................................................................................TATCACAGCCATTTTGACGA.......................................................................................................................................................................................202241.004822822556503073200000
......................................................................................................................................................................................ACAGCCATTTTGACGAGTT....................................................................................................................................................................................192222.004440646612552117200000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAAA.................................................................................................................................................................................262209.504190211160350060007
..................................................................................................................................................................................TATCACAGCCATTTTGACG........................................................................................................................................................................................192190.5038120513185131300006
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGG.....................................................................................................................................................................................222186.00372105651868268640000
.........................................................................................................................................TCGTTAAAATGTTTGTGAACT...............................................................................................................................................................................................................................211132.001325137401300000
.....................................................................................................................................................................................CACAGCCATTTTGACGAGTT....................................................................................................................................................................................202131.50263012712312280000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGA.....................................................................................................................................................................................222130.5026166868292653110000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTA....................................................................................................................................................................................232123.0024626269393223180001
...................................................................................................................................................................................ATCACAGCCATTTTGACGAG......................................................................................................................................................................................202123.0024602331210000000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTG...................................................................................................................................................................................242110.5022114115422371550000
.........................................................................................................................................TCGTTAAAATGTTTGTGAACTT..............................................................................................................................................................................................................................221110.001103027011510000
....................................................................................................................................................................................TCACAGCCATTTTGACGAGT.....................................................................................................................................................................................202102.50205099761021170000
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTT...................................................................................................................................................................................23290.001800177200000010
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTA...................................................................................................................................................................................23289.5017901483100000000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTC...................................................................................................................................................................................24283.00166053781231370000
.................................................................................................................................................................................ATATCACAGCCATTTTGACGAGTT....................................................................................................................................................................................24275.0015001355000000010
.......................................................................................................................................................................................CAGCCATTTTGACGAGTT....................................................................................................................................................................................18271.501430785932100000
..................................................................................................................................................................................TATCACAGCCATTTTGACGATC.....................................................................................................................................................................................22266.0013200114101700000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAC......................................................................................................................................................................................21263.501274008201310000
.....................................................................................................................................................................................CACAGCCATTTTGACGAGT.....................................................................................................................................................................................19245.50910235823140000
.........................................................................................................................................TCGTTAAAATGTTTGTGAACTTAT............................................................................................................................................................................................................................24145.0045013921200000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTG....................................................................................................................................................................................23242.0084111454131000000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTAA...................................................................................................................................................................................24232.006401731111130000
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGC.....................................................................................................................................................................................21231.0062135600200000
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTAA..................................................................................................................................................................................24228.00560461000000000
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTC....................................................................................................................................................................................22227.5055064810000000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTT..................................................................................................................................................................................25224.0048029405640000
.................................................................................................................................................................................ATATCACAGCCATTTTGACGAGT.....................................................................................................................................................................................23223.5047033444200000
..................................................................................................................................................................................TATCACAGCCATTTTGAC.........................................................................................................................................................................................18221.50431123800100000
.................................................................................................................................................................................ATATCACAGCCATTTTGACGAG......................................................................................................................................................................................22217.00340910140100000
.........................................................................................................................................TCGTTAAAATGTTTGTGAACTTA.............................................................................................................................................................................................................................23117.0017201500000000
.........................................................................................................................................TCGTTAAAATGTTTGTGAACC...............................................................................................................................................................................................................................21116.0016301300000000
.......................................................................................................................................TGTCGTTAAAATGTTTGTGAAC................................................................................................................................................................................................................................22116.0016101400100000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAT..................................................................................................................................................................................25214.0028018351010000
.........................................................................................................................................TCGTTAAAATGTTTGTGAAC................................................................................................................................................................................................................................20112.0012001010000010
.........................................................................................................................................TCGTTAAAATGTTTGTGAACTTATGA---.......................................................................................................................................................................................................................26112.0012001110000000
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTAAA.................................................................................................................................................................................25211.0022020200000000
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTG....................................................................................................................................................................................22211.0022022000000000
....................................................................................................................................................................................TCACAGCCATTTTGACGAGTTA...................................................................................................................................................................................22210.5021091020000000
...................................................................................................................................................................................ATCACAGCCATTTTGACGA.......................................................................................................................................................................................19210.0020019100000000
.......................................................................................................................................TGTCGTTAAAATGTTTGTGAACT...............................................................................................................................................................................................................................2318.00840310000000
....................................................................................................................................................................................TCACAGCCATTTTGACGAGC.....................................................................................................................................................................................2028.0016001600000000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTA..................................................................................................................................................................................2528.001607341010000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAA......................................................................................................................................................................................2128.001617132200000
......................................................................................................................................................................................ACAGCCATTTTGACGAGTTT...................................................................................................................................................................................2028.001607121410000
...................................................................................................................................................................................ATCACAGCCATTTTGACG........................................................................................................................................................................................1827.5015015000000000
droEug1
TCTG---GTCA-----------------------AAGT----------------------------------------------TA--T-TATATTTCATAACCGA-TTTA----TTCGCATCTTTCTTATACCATGTCGTTAAAATGTTTGTGACCTTATGT---ATT-CGCAATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCAACATTCGAGCGC------------------------CATTTA-TGAG-AGTTAC-----------------------------------------------------------TTTCAGATCG-ACCAGACGACGTC-----------------A-----ACGSizeHit CountTotal NormTotal
No Reads
droBia1
GCCG---GTCA-----------------------AA------------------------------------------------AA--T-CGCATTTCGCAACCGT-TCGA----CTCGCATCTTTCTTATACCATGTCGTTAAAATGCTTGTGACCTTATGT---GTT-CGCAATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCAACATT-GGGCGC------------------------CAATTA-TG---AGTT------------------------------------------------------------------------------------------------------------ACTSizeHit CountTotal NormTotal
No Reads
droTak1
GCTG---GGCA---------------------CTAA------------------------------------------------AA--T-CATATTTCGTGACCGT-TCGT----ATCGCATCTTTCTTATACCATGTCGTTAAAATGTTTGTGACCTTATGT---ATT-CGCAATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCAACGTT-GGGCGC------------------------CATTTA-TTAGTAGTTACT----TTTAA-----AA--------------------------------------------CCAGATCC-ACCAGA---CGTC-----------------A-----ACGSizeHit CountTotal NormTotal
No Reads
droEle1
GCAA---CTGG----------------ATAGACATA------------------------------------------------AA--T-CAGTTTTTATAAGCGC-TTGC----TTCGCATCTTTCTTATACCATGTCGTTAAAATGCTTGTGACCTTATGT---ATT-CGCAATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCAACATT-TAGGG-----------------------------------A-AGTTCG-----------------------------------------------------------TTTCACATCA-ACCAGA---CGTC-----------------A-----ACGSizeHit CountTotal NormTotal
No Reads
droRho1
GCTG---GGCT-----------------------AA------------------------------------------------AA--T-CAAGTTTCATAAGCGA-TTGC----ATCCCATCTTTCTTATACCATGTCGTTAAAATGTTTGTGACCTTATGT---ATT-CGCAATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCAACAGT-GGGCGC------------------------CATTTA-TGGA-AGTTCAGATTCA-----------------------------------------------------TTTCAGATCC-ACCAGA---CGTC-----------------A-----ACGSizeHit CountTotal NormTotal
No Reads
droFic1
GCTG---GGCA-----------------------AA------------------------------------------------TA--T-CAATTTCCATAACCGA-TTGT----ATCCCATCTTTCTTATACCATGTCGTTAAAATGTTTGTGACCTTATGT---ATC-CACAATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCAACATT-GGGCGC------------------------CATTTC-TTCG-AGTTTCT----T-----------------------------------------------------TTTCAAATCC-AAAAGG---AGTT-----------------A-----ACGSizeHit CountTotal NormTotal
No Reads
droKik1
GCCA---GAAG---------G-------------AG------------------------------------------------TA--C-C--GCTTCGCAA---A-TCAA----ATCGCTTCTTTCTTATACCATGTCGTTAAAATGCTTGTGACCTTATGT---ATT-CGCAATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCAACGTT-GGGCGC------------------------CATTTT-CCAG-AATTC------T-----------------------------------------------------TTACAGATC---------------------------------------CGSizeHit CountTotal NormTotal
No Reads
droAna3
GAAAACCGTCA--GAAAGGG-----------------GCGCGGCGGCAG-------------------------------------------GATGTCATAACCGA-TTGT----GT-TCATCTTTCTTATACCATGTCGTTAAAAGGCTTGTGACCTTATGT---ATTTCGCAATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCACCATT-----------------------------------------------------------------------------------------------------------------------------------C-----------------G-----ACGSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGT.....................................................................................................................................................................................222204663.5040932756214508076082228310030318705
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTT....................................................................................................................................................................................23275484.501509691360084937355493621111728399
..................................................................................................................................................................................TATCACAGCCATTTTGACGAG......................................................................................................................................................................................21213410.50268211074254865650426221777
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTA...................................................................................................................................................................................24210459.0020918354194327469294200
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAA..................................................................................................................................................................................2525920.5011841158111724848118
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTT...................................................................................................................................................................................2425866.00117329481742112115025505230
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGC.....................................................................................................................................................................................2224151.508303774933823017518
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTC....................................................................................................................................................................................2322918.005836657461037532
..................................................................................................................................................................................TATCACAGCCATTTTGACGA.......................................................................................................................................................................................2021430.5028611042074878252399
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAAA.................................................................................................................................................................................2621315.502631542451124110
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTT....................................................................................................................................................................................222948.0018961084753691331
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGT.....................................................................................................................................................................................212490.009804113577107188
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGA.....................................................................................................................................................................................222457.509153117930585612
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTG...................................................................................................................................................................................242316.006323218632388336
..................................................................................................................................................................................TATCACAGCCATTTTGACG........................................................................................................................................................................................192277.5055561287171441
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTA....................................................................................................................................................................................232255.5051117296152910144
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTAA...................................................................................................................................................................................242228.004563409145322
......................................................................................................................................................................................ACAGCCATTTTGACGAGT.....................................................................................................................................................................................182212.5042542671241083
..................................................................................................................................................................................TATCACAGCCATTTTGACGAT......................................................................................................................................................................................212180.0036007424343
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGG.....................................................................................................................................................................................222159.50319243329721160
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTC...................................................................................................................................................................................242133.50267171759122034
....................................................................................................................................................................................TCACAGCCATTTTGACGAGTT....................................................................................................................................................................................212122.002444617833113
......................................................................................................................................................................................ACAGCCATTTTGACGAGTT....................................................................................................................................................................................192116.00232881339938
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTA...................................................................................................................................................................................232107.00214241891000
....................................................................................................................................................................................TCACAGCCATTTTGACGAGT.....................................................................................................................................................................................202104.00208769296115
..................................................................................................................................................................................TATCACAGCCATTTTGACGAC......................................................................................................................................................................................21286.50173011603252
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTT..................................................................................................................................................................................25280.5016129101334147
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTG....................................................................................................................................................................................23276.00152377112158
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTAA..................................................................................................................................................................................24265.50131111200000
.....................................................................................................................................................................................CACAGCCATTTTGACGAGTT....................................................................................................................................................................................20264.50129111070353
..................................................................................................................................................................................TATCACAGCCATTTTGACGAA......................................................................................................................................................................................21264.0012815171113
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTT...................................................................................................................................................................................23259.5011985240127
.....................................................................................................................................................................................CACAGCCATTTTGACGAGT.....................................................................................................................................................................................19256.0011254931747
...................................................................................................................................................................................ATCACAGCCATTTTGACGAG......................................................................................................................................................................................20251.5010380140108
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTAAA..................................................................................................................................................................................25236.50734671001
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGC.....................................................................................................................................................................................21233.50670650110
.........................................................................................................................................TCGTTAAAAGGCTTGTGACCT...............................................................................................................................................................................................................................21133.00330216123
.......................................................................................................................................................................................CAGCCATTTTGACGAGTT....................................................................................................................................................................................18230.50618510002
..................................................................................................................................................................................TATCACAGCCATTTTGACGATC.....................................................................................................................................................................................22230.00600510603
.........................................................................................................................................TCGTTAAAAGGCTTGTGACCTTATG...........................................................................................................................................................................................................................25129.00291004024
..................................................................................................................................................................................TATCACAGCCATTTTGACGT.......................................................................................................................................................................................20226.00522102839
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTC....................................................................................................................................................................................22225.50510510000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTAA.................................................................................................................................................................................26223.50472414000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTA..................................................................................................................................................................................25223.50471342334
....................................................................................................................................................................................TCACAGCCATTTTGACGAGTTA...................................................................................................................................................................................22220.00403370000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTAAA................................................................................................................................................................................27218.00361350000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAT..................................................................................................................................................................................25218.00362262510
.....................................................................................................................................................................................CACAGCCATTTTGACGAGTTA...................................................................................................................................................................................21216.50331320000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTG..................................................................................................................................................................................25216.50334222320
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTCA..................................................................................................................................................................................25215.50310715027
....................................................................................................................................................................................TCACAGCCATTTTGACGAGTTAA..................................................................................................................................................................................23215.50312290000
..................................................................................................................................................................................TATCACAGCCATTTTGAC.........................................................................................................................................................................................18214.00286170302
.........................................................................................................................................TCGTTAAAAGGCTTGTGACCTT..............................................................................................................................................................................................................................22114.0014030308
......................................................................................................................................................................................ACAGCCATTTTGACGAGTTA...................................................................................................................................................................................20213.50270215100
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGAC....................................................................................................................................................................................23213.50270261000
.....................................................................................................................................................................................CACAGCCATTTTGACGAGTTAA..................................................................................................................................................................................22213.00260260000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGCC....................................................................................................................................................................................23212.50250231100
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAC..................................................................................................................................................................................25311.67351265120
droBip1
TCGC---ATCGTGGGGCG--------------CG---GC---------------------------------------------AG--G-C-GATTTCGTAACCGA-TTGT------TCCGTCTTTCTTATACCATGTCGTTGAAAGGCTTGTGACCTTATGT---AGTTCGCAATCATATCACAGCCATTTTGACGAGTTTGGGCAAAGAAATGTCACCATT-TCG--------------------------------------------------------------------------------------------------------------AT---ACCATA--CCGTT-----------------G-----ACGSizeHit CountTotal NormTotal
No Reads
dp5
GCAATCCATCATCGATCGGG-----------------GCAG---GGCAGGATGGAGCA---------------------------------------CAG-AGTGG-ACGG----AAAGCATCTTTCTTATACCATGTCGTTAAAATGTTTGTGACCTTATGT---ACTCTTGAATCATATCACAGCCATTTTGACGAGTTTGGGTACAGAAATTTCAACATA-AAATGC------------------------CCCCTTAACAAT---CCA--TTCT-----------------------------------------------------TTTCAGATCCGATCCGATCCATTCCCCGGGAGAAAAATGATGACGGGCTGSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTT....................................................................................................................................................................................232149495.502989913213012110013328458148601072212862924346533
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGT.....................................................................................................................................................................................222126180.5025236125683737078231883434322280614052392155461
..................................................................................................................................................................................TATCACAGCCATTTTGACGAG......................................................................................................................................................................................21211810.50236211297573493558331149334458217923
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGC.....................................................................................................................................................................................2227491.00149820901095936966613931010
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTT....................................................................................................................................................................................2226067.0012134010910625464563339331
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTC....................................................................................................................................................................................2325169.501033915088251401222118010
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTT...................................................................................................................................................................................2424561.00912204679984741231440194333683
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTA...................................................................................................................................................................................2424504.00900804170348814376389217120153
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGT.....................................................................................................................................................................................2123088.00617605333305466312020100
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAA..................................................................................................................................................................................2521359.50271901857530622514572640
..................................................................................................................................................................................TATCACAGCCATTTTGACGA.......................................................................................................................................................................................2021005.00201021202148309191833417186
.........................................................................................................................................TCGTTAAAATGTTTGTGACCTTATG...........................................................................................................................................................................................................................251679.006790182997711001282
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGA.....................................................................................................................................................................................222488.009760392222136114611117203
......................................................................................................................................................................................ACAGCCATTTTGACGAGT.....................................................................................................................................................................................182429.00858056163347321564001
...................................................................................................................................................................................ATCACAGCCATTTTGACGAG......................................................................................................................................................................................202407.5081507441355300000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTA....................................................................................................................................................................................232396.007920330259714938291240
....................................................................................................................................................................................TCACAGCCATTTTGACGAGTT....................................................................................................................................................................................212354.00708052972791574002
..................................................................................................................................................................................TATCACAGCCATTTTGACG........................................................................................................................................................................................192335.5067194952775222101480
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTC...................................................................................................................................................................................242276.0055201111551311026803360
..................................................................................................................................................................................TATCACAGCCATTTTGACGAC......................................................................................................................................................................................212270.0054002324212200000
......................................................................................................................................................................................ACAGCCATTTTGACGAGTT....................................................................................................................................................................................192249.504990147142113211662520
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTT...................................................................................................................................................................................232210.5042103881413204000
....................................................................................................................................................................................TCACAGCCATTTTGACGAGT.....................................................................................................................................................................................202207.00414025942752942030
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTG...................................................................................................................................................................................242200.5040112865584254000
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTA...................................................................................................................................................................................232192.503850352243100500
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGG.....................................................................................................................................................................................222173.503470524622183386000
.....................................................................................................................................................................................CACAGCCATTTTGACGAGTT....................................................................................................................................................................................202142.00284017635455716000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTAA...................................................................................................................................................................................242104.50209010948425215600
.......................................................................................................................................................................................CAGCCATTTTGACGAGTT....................................................................................................................................................................................18285.5017101352013300000
.................................................................................................................................................................................ATATCACAGCCATTTTGACGAGTT....................................................................................................................................................................................24281.501630136551001510
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTAA..................................................................................................................................................................................24273.50147013950000300
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTG....................................................................................................................................................................................23270.501410158829630000
.....................................................................................................................................................................................CACAGCCATTTTGACGAGT.....................................................................................................................................................................................19268.001361811726416000
.................................................................................................................................................................................ATATCACAGCCATTTTGACGAGT.....................................................................................................................................................................................23259.501190771515830100
.................................................................................................................................................................................ATATCACAGCCATTTTGACGAG......................................................................................................................................................................................22257.5011503730123130110
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTT..................................................................................................................................................................................25252.00104060740319830
..................................................................................................................................................................................TATCACAGCCATTTTGACGATC.....................................................................................................................................................................................22251.50103008319010000
..................................................................................................................................................................................TATCACAGCCATTTTGAC.........................................................................................................................................................................................18246.00921372325200400
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTC....................................................................................................................................................................................22245.0090036423000000
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGC.....................................................................................................................................................................................21244.5089063647000000
...................................................................................................................................................................................ATCACAGCCATTTTGACGA.......................................................................................................................................................................................19244.508908900000000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAA......................................................................................................................................................................................21234.00680301212463010
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGAC....................................................................................................................................................................................23226.005200455110000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTAAA..................................................................................................................................................................................25224.504903780202000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTG..................................................................................................................................................................................25223.004602910932200
.........................................................................................................................................TCGTTAAAATGTTTGTGACCTTAT............................................................................................................................................................................................................................24121.002101151100003
..................................................................................................................................................................................TATCACAGCCATTTTGACGT.......................................................................................................................................................................................20220.004008341420000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGCC....................................................................................................................................................................................23218.503700343000000
.........................................................................................................................................TCGTTAAAATGTTTGTGACCT...............................................................................................................................................................................................................................21117.00170188000000
.........................................................................................................................................TCGTTAAAATGTTTGTGACCTT..............................................................................................................................................................................................................................22117.00170580300001
...................................................................................................................................................................................ATCACAGCCATTTTGACG........................................................................................................................................................................................18216.503303300000000
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGA.....................................................................................................................................................................................21216.503302913000000
....................................................................................................................................................................................TCACAGCCATTTTGACGAG......................................................................................................................................................................................19216.503302704200000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTA..................................................................................................................................................................................25216.003202000504120
.........................................................................................................................................TCGTTAAAATGTTTGTGACCTTATGA---.......................................................................................................................................................................................................................26116.00160190000006
..........................................................................................................................................CGTTAAAATGTTTGTGACCTTATG...........................................................................................................................................................................................................................24115.00150120102009
......................................................................................................................................................................................ACAGCCATTTTGACGAGTTT...................................................................................................................................................................................20214.002803005811010
..................................................................................................................................................................................TATCACAGCCATTTTGACGAT......................................................................................................................................................................................21213.002603911300000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAAA.....................................................................................................................................................................................22211.502301551200000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTCC..................................................................................................................................................................................25311.3334010602150100
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTA....................................................................................................................................................................................22211.002202200000000
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTG...................................................................................................................................................................................23210.502102100000000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAAC.....................................................................................................................................................................................22210.502100156000000
....................................................................................................................................................................................TCACAGCCATTTTGACGAGTTT...................................................................................................................................................................................22210.502101801002000
.....................................................................................................................................................................................CACAGCCATTTTGACGAG......................................................................................................................................................................................18210.502101703000010
....................................................................................................................................................................................TCACAGCCATTTTGACGAGTTA...................................................................................................................................................................................22210.502101830000000
......................................................................................................................................................................................ACAGCCATTTTGACGAGTTA...................................................................................................................................................................................20210.002001010900000
.........................................................................................................................................TCGTTAAAATGTTTGTGACCTTA.............................................................................................................................................................................................................................23110.00100091000000
.........................................................................................................................................TCGTTAAAATGTTTGTGACCTTATGT---.......................................................................................................................................................................................................................26110.00100051000004
..................................................................................................................................................................................TATCACAGCCATTTTGACGACC.....................................................................................................................................................................................2229.501900144010000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAT..................................................................................................................................................................................2529.001801070001000
droPer2
GCAATCCATCATCGATCGGG-----------------GCAG---GGCAGGATGGAGCA---------------------------------------CAG-AGTGG-ACGG----AAAGCATCTTTCTTATACCATGTCGTTAAAATGTTTGTGACCTTATGT---ACTCTTGAATCATATCACAGCCATTTTGACGAGTTTGGGTACAGAAATTTCAACATG-AAATGC------------------------CCCCTTAACAAT---CCA--TTCT-----------------------------------------------------TTTCAGATCCGATCCGATCCATTCCCCGGGAGAAAAATGATGACGGGCTGSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGT.....................................................................................................................................................................................22242942.508588535913731961523317348673996
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTT....................................................................................................................................................................................23229027.00580541662227738399275191003397
..................................................................................................................................................................................TATCACAGCCATTTTGACGAG......................................................................................................................................................................................2122419.0048381101838956920902112
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTT...................................................................................................................................................................................2421174.502349061877297986371
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTA...................................................................................................................................................................................2421117.502235815763137720556
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTT....................................................................................................................................................................................222883.501767016563345420
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGT.....................................................................................................................................................................................212539.00107801016120347
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAA..................................................................................................................................................................................252447.0089447061416289
......................................................................................................................................................................................ACAGCCATTTTGACGAGT.....................................................................................................................................................................................182380.50761151112404022
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGC.....................................................................................................................................................................................222287.00574618131643685
..................................................................................................................................................................................TATCACAGCCATTTTGACGA.......................................................................................................................................................................................202277.5055516244128748310
......................................................................................................................................................................................ACAGCCATTTTGACGAGTT....................................................................................................................................................................................192168.5033711538921874
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGA.....................................................................................................................................................................................222135.5027111001873781
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGG.....................................................................................................................................................................................22299.00198243616201011
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTA....................................................................................................................................................................................23283.001660692524453
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTG...................................................................................................................................................................................24271.501431382289110
..................................................................................................................................................................................TATCACAGCCATTTTGACG........................................................................................................................................................................................19266.501331277914210
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTC...................................................................................................................................................................................24265.001301262182657
...................................................................................................................................................................................ATCACAGCCATTTTGACGAG......................................................................................................................................................................................20261.5012301230000
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTA...................................................................................................................................................................................23251.5010301012000
....................................................................................................................................................................................TCACAGCCATTTTGACGAGTT....................................................................................................................................................................................21249.50990860625
.........................................................................................................................................TCGTTAAAATGTTTGTGACCTTATG...........................................................................................................................................................................................................................25140.004022110430
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTC....................................................................................................................................................................................23239.007816411506
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTAA...................................................................................................................................................................................24234.0068039133112
....................................................................................................................................................................................TCACAGCCATTTTGACGAGT.....................................................................................................................................................................................20232.00640416881
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTAA..................................................................................................................................................................................24229.00580580000
..................................................................................................................................................................................TATCACAGCCATTTTGAC.........................................................................................................................................................................................18227.50553991060
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTT...................................................................................................................................................................................23226.50530480014
.....................................................................................................................................................................................CACAGCCATTTTGACGAGT.....................................................................................................................................................................................19215.50310145435
.................................................................................................................................................................................ATATCACAGCCATTTTGACGAGT.....................................................................................................................................................................................23212.00240122442
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTT..................................................................................................................................................................................25211.5023080366
.....................................................................................................................................................................................CACAGCCATTTTGACGAGTT....................................................................................................................................................................................20210.0020093305
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTAAA..................................................................................................................................................................................2529.00180161010
......................................................................................................................................................................................ACAGCCATTTTGACGAGTTT...................................................................................................................................................................................2029.00180105120
.................................................................................................................................................................................ATATCACAGCCATTTTGACGAGTT....................................................................................................................................................................................2429.00180170010
.........................................................................................................................................TCGTTAAAATGTTTGTGACCT...............................................................................................................................................................................................................................2118.008611000
.........................................................................................................................................TCGTTAAAATGTTTGTGACC................................................................................................................................................................................................................................2018.008800000
..................................................................................................................................................................................TATCACAGCCATTTTGACGATC.....................................................................................................................................................................................2227.50150102120
...................................................................................................................................................................................ATCACAGCCATTTTGACGA.......................................................................................................................................................................................1927.00140140000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTG....................................................................................................................................................................................2326.50130200101
..................................................................................................................................................................................TATCACAGCCATTTTGACGAA......................................................................................................................................................................................2126.5013051160
.......................................................................................................................................................................................CAGCCATTTTGACGAGTT....................................................................................................................................................................................1826.0012092100
.................................................................................................................................................................................ATATCACAGCCATTTTGACGAG......................................................................................................................................................................................2225.5011027110
......................................................................................................................................................................................ACAGCCATTTTGACGAGC.....................................................................................................................................................................................1825.5011001550
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTG..................................................................................................................................................................................2525.0010021025
..................................................................................................................................................................................TATCACAGCCATTTTGACGACC.....................................................................................................................................................................................2225.0010000190
..................................................................................................................................................................................TATCACAGCCATTTTGACGT.......................................................................................................................................................................................2024.509010062
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTA..................................................................................................................................................................................2524.008041111
droWil2
TCGA---AATG---------G------ATGG---------TATCCT--------------------------------------TA--G---A-----ATATGTGA-ATTG----ACTGCAACTTTCTTATACCATGTCGTTAAAATGTTTGTGACTTTATGTTGTGTC-TCTATTCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCAACATT-GT----------------------------------------AGTTCCT----ATTTACGACCAACCAGCCAGTCAACCGGATAACCATCCTCATCCAC------------------------------TT-----------------G-----ATGSizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGT.....................................................................................................................................................................................222408096.008161925764262547777368409407988
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTT....................................................................................................................................................................................23280887.001617749623689241519435925410
..................................................................................................................................................................................TATCACAGCCATTTTGACGAG......................................................................................................................................................................................21224240.004848033454889247919030809
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTT...................................................................................................................................................................................2414647.00464711139635918071074
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTA...................................................................................................................................................................................2424281.5085632158931685190
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAA..................................................................................................................................................................................2522590.00518028056435710
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTT....................................................................................................................................................................................2221703.003406230159277103
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGT.....................................................................................................................................................................................2121350.502701519596185546
..................................................................................................................................................................................TATCACAGCCATTTTGACGA.......................................................................................................................................................................................2021308.502617144296203281829
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGC.....................................................................................................................................................................................2221163.00232619436245341538
.........................................................................................................................................TCGTTAAAATGTTTGTGACTTTATG...........................................................................................................................................................................................................................2511060.00106027880669105
......................................................................................................................................................................................ACAGCCATTTTGACGAGT.....................................................................................................................................................................................182672.50134524294568720
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGA.....................................................................................................................................................................................222617.50123524656284856
..................................................................................................................................................................................TATCACAGCCATTTTGACG........................................................................................................................................................................................192601.501203492151121538
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGG.....................................................................................................................................................................................222463.00926353340224315
....................................................................................................................................................................................TCACAGCCATTTTGACGAGT.....................................................................................................................................................................................202280.5056101103159289
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTA....................................................................................................................................................................................232259.50519376335186
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTG...................................................................................................................................................................................242245.504915969226794
.................................................................................................................................................................................ATATCACAGCCATTTTGACGAG......................................................................................................................................................................................222176.5035319190152163
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTAA...................................................................................................................................................................................242173.0034606312748
...................................................................................................................................................................................ATCACAGCCATTTTGACGAG......................................................................................................................................................................................202169.5033903110325
.....................................................................................................................................................................................CACAGCCATTTTGACGAGT.....................................................................................................................................................................................192128.50257030330194
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTT...................................................................................................................................................................................231124.001240118042
......................................................................................................................................................................................ACAGCCATTTTGACGAGTT....................................................................................................................................................................................192101.50203937712228
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTA...................................................................................................................................................................................232101.5020301710320
....................................................................................................................................................................................TCACAGCCATTTTGACGAGTT....................................................................................................................................................................................212100.50201014443815
.........................................................................................................................................TCGTTAAAATGTTTGTGACTTT..............................................................................................................................................................................................................................22199.0099970011
.........................................................................................................................................TCGTTAAAATGTTTGTGACTTTAT............................................................................................................................................................................................................................24197.00975400367
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTC....................................................................................................................................................................................23285.00170310910246
..................................................................................................................................................................................TATCACAGCCATTTTGACGAC......................................................................................................................................................................................21271.5014311801519
.........................................................................................................................................TCGTTAAAATGTTTGTGACT................................................................................................................................................................................................................................20162.0062610001
..................................................................................................................................................................................TATCACAGCCATTTTGACGAA......................................................................................................................................................................................21253.50107791981
.................................................................................................................................................................................ATATCACAGCCATTTTGACGAGT.....................................................................................................................................................................................23249.009813503329
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTAAA..................................................................................................................................................................................25247.00940250690
.....................................................................................................................................................................................CACAGCCATTTTGACGAGTT....................................................................................................................................................................................20241.0082064279
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTAA..................................................................................................................................................................................24239.50790690100
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTT..................................................................................................................................................................................25138.0038023465
..........................................................................................................................................CGTTAAAATGTTTGTGACTTTATG...........................................................................................................................................................................................................................24138.00381310222
.......................................................................................................................................................................................CAGCCATTTTGACGAGTT....................................................................................................................................................................................18237.5075065154
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAT..................................................................................................................................................................................25229.5059090473
.........................................................................................................................................TCGTTAAAATGTTTGTGACTTTA.............................................................................................................................................................................................................................23126.0026142091
..................................................................................................................................................................................TATCACAGCCATTTTGAC.........................................................................................................................................................................................18225.50511926051
..................................................................................................................................................................................TATCACAGCCATTTTGACGAT......................................................................................................................................................................................21225.00501112423
.........................................................................................................................................TCGTTAAAATGTTTGTGACTTTATGA..........................................................................................................................................................................................................................26120.0020120080
....................................................................................................................................................................................TCACAGCCATTTTGACGAG......................................................................................................................................................................................19219.50390180417
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTG....................................................................................................................................................................................23218.50373110149
.................................................................................................................................................................................ATATCACAGCCATTTTGACGAGTT....................................................................................................................................................................................24218.5037034030
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTAA.................................................................................................................................................................................26218.5037080290
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTA..................................................................................................................................................................................25118.0018040140
.................................................................................................................................................................................ATATCACAGCCATTTTGACGA.......................................................................................................................................................................................21215.0030530715
.................................................................................................................................................................................ATATCACAGCCATTTTGACG........................................................................................................................................................................................20214.5029810020
..................................................................................................................................................................................TATCACAGCCATTTTGACGG.......................................................................................................................................................................................20212.5025220003
.........................................................................................................................................TCGTTAAAATGTTTGTGACTTTATGT..........................................................................................................................................................................................................................26112.0012000120
.....................................................................................................................................................................................CACAGCCATTTTGACGAG......................................................................................................................................................................................18211.0022080014
....................................................................................................................................................................................TCACAGCCATTTTGACGAGTTT...................................................................................................................................................................................22111.001108102
.........................................................................................................................................TCGTTAAAATGTTTGTGACTT...............................................................................................................................................................................................................................21110.001090010
...........................................................................................................................................GTTAAAATGTTTGTGACTTTATG...........................................................................................................................................................................................................................23110.0010000100
..................................................................................................................................................................................TATCACAGCCATTTTGACGT.......................................................................................................................................................................................2029.5019001315
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTAAA................................................................................................................................................................................2729.0018040140
...................................................................................................................................................................................ATCACAGCCATTTTGACGA.......................................................................................................................................................................................1928.5017016001
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAC..................................................................................................................................................................................2538.3325000241
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAAT.................................................................................................................................................................................2627.5015000150
....................................................................................................................................................................................TCACAGCCATTTTGACGAGTTA...................................................................................................................................................................................2227.5015012030
..................................................................................................................................................................................TATCACAGCCATTTTGACGAAA.....................................................................................................................................................................................2227.501501068
.........................................................................................................................................TCGTTAAAATGTTTGTGACC................................................................................................................................................................................................................................2017.00770000
.........................................................................................................................................TCGTTAAAATGTTTGTGAC.................................................................................................................................................................................................................................1917.00770000
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTTT..................................................................................................................................................................................2417.00707000
.....................................................................................................................................................................................CACAGCCATTTTGACGAGTTT...................................................................................................................................................................................2117.00704201
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGA.....................................................................................................................................................................................2126.5013012001
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAAC.................................................................................................................................................................................2626.0012000120
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTTT.................................................................................................................................................................................2615.00504010
......................................................................................................................................................................................ACAGCCATTTTGACGAGTTA...................................................................................................................................................................................2025.001002080
droVir3
GCAG---AATG---------GGCTGGCAAGGACGAT------------------------------------------------TA--T-CGTTT------------TTGC----ATTGCAATTTTCTTATACCATGTCGTTAAAATGCCTGTGACCTTATGT---ATT-TTATATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCAACAGA-GCACACATAATGTGTGCGACGT---------------------GTACA-----------------------------------------------------------TG-----------------------------------------------CSizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTT....................................................................................................................................................................................232299615.505992315718862186140142844551841341938920527359451368059511066860412035598554653549933552438313491072273221530385574006921356191257283238856595936353701007749716473218701524525693942367259691271362472861962662191311102008325049133941361144811637168631029882837377235742712241242943652887164202367536
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGT.....................................................................................................................................................................................222282002.00564004171646631651300511321444667271778186823709377544220545111817783634799164800043157965804611215212641572111665212622234917118193067646248777325804312671147841446299961575112702173134272249392762689514190107684939843841347933231215868759698649396237962643312131442353200733102667253962166413211784
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTA...................................................................................................................................................................................24241828.508365716184854023371209885649268952749616810541125901005109921240253857319358636405109380833313486472423409312950697560504536504111089910871511182313122300229433146200111663168720520115520613087110155192182383370101
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAA..................................................................................................................................................................................25241189.50823791099817577334419135010927695531915371113598341866340724405617447116512054212885877527915929132167397374940617138353596453730019347205821576100341736629910890508770702788276164183
..................................................................................................................................................................................TATCACAGCCATTTTGACGAG......................................................................................................................................................................................21229809.505961913142611846109216713987544201308123201001371012780372865586338284590908375124586718301544285528981294412062324081792382742430241841116137613112515253412281977341095511482628521671616061491158371879257049867266314583694449111192
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTT...................................................................................................................................................................................24227781.50555631332364161833560887361426873462492491153649268868565542130860812272888173413032704243721062199875308511601659783250713611154359220674310033053712525331115398969250925850129972626098887533126744812143431
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTC...................................................................................................................................................................................24221978.5043957113136734493813784622138425282815515121771192085185124232123430137449543350143865194570266639541513825559665476113011112035422104107111776449109190767393831326475134727
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGT.....................................................................................................................................................................................2123170.5063410058851174620000081118831492227514102021142072411113109122200000000001000100012203021000001120300010
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTT....................................................................................................................................................................................2223146.50629300567412652402010122480893979162920504919381021685158108120000000000010100001211110112420021301300001
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTAA...................................................................................................................................................................................2423122.506245011192581173827422313822211265431402531333362161541347820537359319730106641557959130010200010002000042517011571364331227109474414102426
......................................................................................................................................................................................ACAGCCATTTTGACGAGTT....................................................................................................................................................................................1922972.0059440110845841764377383325051188502450414526154541131163126172145766433113352334972343839635800000000000010000004915714417119042121312240020
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTA....................................................................................................................................................................................2322085.0041700219369562033103916151820106131152064141068272136141314296150493129111140179221144114175011100120013110000225265604249392920132016516132277816
..................................................................................................................................................................................TATCACAGCCATTTTGACGA.......................................................................................................................................................................................2022065.00413073686036154114210037130893698935510120120371047913410612413969226771963989634362400102214304410132146231675341876495252464743395054371082626
......................................................................................................................................................................................ACAGCCATTTTGACGAGT.....................................................................................................................................................................................1821790.0035800186415068112355135172423555432857373511349793321057170834869361022614112610182391781260000000000000001200148386200577342331240120011
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTC....................................................................................................................................................................................2321653.003306252329156173291082020141421481324810247422232320193166762843174677760237000001000110000000326401140132821322004410001
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTG...................................................................................................................................................................................2421518.00303641021125388196134413021671117524122087109881481399677281031441689302184143106180110010001220000011292714011516191886786647919718651415
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGC.....................................................................................................................................................................................2221320.50264163650165123792222277218482318783927101712131473081012844382800010000000000000003032450012151271211000180100
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTAAA..................................................................................................................................................................................2521027.50205501808110901132251210000140144904417164783141393108222429100219203000000001000000106000522032261960030519341216
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGA.....................................................................................................................................................................................2221006.002012233825190712540101120158191361117192153315748434224622373142842531801202222425414000963398470353711811156115771073913232240
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTCA..................................................................................................................................................................................252952.501905002733551900001165240112512257182020186759246723386450228325383470000001000000000000180120101742411301050025
..................................................................................................................................................................................TATCACAGCCATTTTGACG........................................................................................................................................................................................192674.001348352133509404200102020187188916201419222524262993711316212758300100100101102110233451331312739362825573353211
......................................................................................................................................................................................ACAGCCATTTTGACGAGTTA...................................................................................................................................................................................202562.5011250060908820104052511331253412735213848932444135010969511572000000000000000000004010333302200000020022
...................................................................................................................................................................................ATCACAGCCATTTTGACGAG......................................................................................................................................................................................202530.0010600010415000000000002010001000001110300010000000000000000000000011000001000000000000
.........................................................................................................................................TCGTTAAAATGCCTGTGACCTTATG...........................................................................................................................................................................................................................251505.0050506413300000000004012210230000035131012000100156815317338910014451000161754020000275256714
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTA..................................................................................................................................................................................252470.5094100202231510001121041042463325382256532922937599401408959561100010000000000000018570133431303201001011
......................................................................................................................................................................................ACAGCCATTTTGACGAGTTAA..................................................................................................................................................................................212377.0075400611611503002830100103004518162821100068472116845711300000000000000000000300030910200000030012
......................................................................................................................................................................................ACAGCCATTTTGACGAGTTT...................................................................................................................................................................................202335.506710080501635050302212104810239911771651211410993457161186769000000000000000000051432211800100002000000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTT..................................................................................................................................................................................252329.506590046941462100101277412814141112211212352736442072721427917201100000000000200001002523081700062012100100
......................................................................................................................................................................................ACAGCCATTTTGACGAGTTC...................................................................................................................................................................................202321.00642003119442000110001101001320221155127201851389000123137000000000000000000001121701100000000000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAT..................................................................................................................................................................................252315.006300016315060100010300311140320301733481116635534268940472350100000000000000000545082732101100010001
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGG.....................................................................................................................................................................................222269.50539957695624321005106210218177200200118152142109010000000000100100249745502617300797107200012
....................................................................................................................................................................................TCACAGCCATTTTGACGAGTT....................................................................................................................................................................................212255.00510003353251001000004100210131116131820363410232431000000000000000110012400000020210000000
..................................................................................................................................................................................TATCACAGCCATTTTGAC.........................................................................................................................................................................................182249.004983847220000000001710467807822013262115161315125204432772001000100000000230023006645594710116110012
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTCC..................................................................................................................................................................................253248.337450033116191004000001010293132254657557501360650000121120000000000000000000011300600000000100000
....................................................................................................................................................................................TCACAGCCATTTTGACGAGT.....................................................................................................................................................................................202245.004900130527222000007551113263448361112759302510452000000000000000000048200011000100000000
.......................................................................................................................................................................................CAGCCATTTTGACGAGTT....................................................................................................................................................................................182197.0039400861321152901010005345331030402251611762136111513179000000000000000000012028200000110000000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTCT..................................................................................................................................................................................252184.003680032851000011000010232218221547292666039030010420010000000000000000001300523100003100000
.........................................................................................................................................TCGTTAAAATGCCTGTGACCTT..............................................................................................................................................................................................................................221173.00173159320000100000086344007900000201100000000000001112123033003605100001102011030210
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTT...................................................................................................................................................................................232172.00344002844400000001021010022120254240413211200000000000000000000003010300000002000000
.....................................................................................................................................................................................CACAGCCATTTTGACGAGTT....................................................................................................................................................................................202170.0034000127258470100001221121321244212647111231330230000000000000000000314461500022000000000
.........................................................................................................................................TCGTTAAAATGCCTGTGACCT...............................................................................................................................................................................................................................211159.00159358510000101000055434004400010102200000000000003001152432006304000000200000152101
.....................................................................................................................................................................................CACAGCCATTTTGACGAGT.....................................................................................................................................................................................192128.502570014716302011002221021001347572450510246231000000000000000000024511100000100000000
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTA...................................................................................................................................................................................232122.50245001559200000000200001000003231001006051791200000000000010000000000001220000000000101
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTG..................................................................................................................................................................................252114.00228001003030010031220111612103611101165161187106611100000000000000000003220100001314712700010
.................................................................................................................................................................................ATATCACAGCCATTTTGACGAGTT....................................................................................................................................................................................242103.00206001756001000000010000010060010000001000010000000000000000000010006300100000000002
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTCA...................................................................................................................................................................................24296.0019200120102200001010000107009104223621454826141699000000000000000000010202001002102002000
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTAA..................................................................................................................................................................................24291.001820070200300000120000000001651231000132620121020000000000000000000000001411000000010021
..................................................................................................................................................................................TATCACAGCCATTTTGACGAA......................................................................................................................................................................................21290.0018001254010200000010131210203372352511358551000100100000000001001360037912102000100245
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTG....................................................................................................................................................................................23286.5017300331310020000000200001201550404128234461740000000000000001000219401403062302200000
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTC...................................................................................................................................................................................23284.001680011780300000000000000300110111250901010001000000000000000000000130000000000000000
.................................................................................................................................................................................ATATCACAGCCATTTTGACGAGT.....................................................................................................................................................................................23283.50167001560000000000000000000111000010100000000000000000000000000010004001000000000000
.........................................................................................................................................TCGTTAAAATGCCTGTGACCTTAT............................................................................................................................................................................................................................24175.0075002230000000000710105200800000210100000000000000100020000000002100001000100002102
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTCC...................................................................................................................................................................................24273.501470011043400001000201001801800211256200170000622000000000000000000000101000000010000000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAAT.................................................................................................................................................................................26270.5014100221010000112000000000275112000217011161911130000000000000000000001003702000000010010
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTC..................................................................................................................................................................................25364.001920040454100010020002113217245537168272120412012000000000000000000000303100000100000000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTCCC.................................................................................................................................................................................26361.0018300804620000000000010300050220889390200000523000000000000000000000431000011000001000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGAA....................................................................................................................................................................................23254.501090011310100000000100001000402221042010623200000000000000000010010002014200000045373
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTGA..................................................................................................................................................................................25254.00108003002400000201120001004504241035051517970010000000000000000002106100000000000000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAAC.................................................................................................................................................................................26252.50105003160100001300000003009330301018031174230000000000000000000010000121000000003120
..................................................................................................................................................................................TATCACAGCCATTTTGACGAC......................................................................................................................................................................................21252.00104320134000000010012010012012200111200001000000000000000000000008100041601101040000
..................................................................................................................................................................................TATCACAGCCATTTTGACGAAA.....................................................................................................................................................................................22247.0094001510000000020000000000030322101001053500000000001000000000013003126700000031355
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAC..................................................................................................................................................................................25342.6712800508040000010000000000215264000173115124200000000000000000000030000031100000010000
.........................................................................................................................................TCGTTAAAATGCCTGTGACCTTA.............................................................................................................................................................................................................................23137.00370007000000000010120000200000000001000000000222102220004000100100000200000002000
........................................................................................................................................................................................AGCCATTTTGACGAGTTAA..................................................................................................................................................................................19236.007200100100000247000000100422420000414157640000000000000000000000000000000000000010
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTCC.................................................................................................................................................................................26335.331060030141000000001101080001000161310250100000010000000000000000000000100000000000000000
..................................................................................................................................................................................TATCACAGCCATTTTGACGATC.....................................................................................................................................................................................22234.0068000100001000000110100323100100003000210000000000000000000000260091910000000000001
....................................................................................................................................................................................TCACAGCCATTTTGACGAG......................................................................................................................................................................................19233.506700531000000000010000001101023100100010000000000000000000000000000000000000000100
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTAG...................................................................................................................................................................................24230.00600020100001001210000000023010422520231231000000000000000000000001051200000041023
...................................................................................................................................................................................ATCACAGCCATTTTGACGA.......................................................................................................................................................................................19229.505900530000000000000000000000110000200000000000000000000000000001000000100000000000
.................................................................................................................................................................................ATATCACAGCCATTTTGACGAG......................................................................................................................................................................................22229.005800411000000000001001000000100201300100000000000000000000000000003100100000000010
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTCAA..................................................................................................................................................................................25228.005600002000000010000000000340220000515851050000000000000000000010002000000000000000
droMoj3
CTGG---ATTA-----------------TCCACCTC------------------------------------------------AATCTCC-ATCTTCATTTGCAT-TCGA----ATTGCAATTTTCTTATACCATGTCGTTAAAATGTCTGTGACCGTATGT---ATT-CACTATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATCTCAACAGA-GCTCGCGTTACGCGTCCGACATGTA---------------------------------------------------------------TGT---TGTACT----------------------------AAT-----------------T-----ATASizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGT.....................................................................................................................................................................................222449045.0089809010692983208435525443956375446208
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTT....................................................................................................................................................................................232235172.50470345623531451187281184635786215045
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGC.....................................................................................................................................................................................22239283.50785671231591323037778664
..................................................................................................................................................................................TATCACAGCCATTTTGACGAG......................................................................................................................................................................................21229145.005829019720652211321505283101101
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTT....................................................................................................................................................................................22221612.50432258831952597939306491257
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGT.....................................................................................................................................................................................21212257.50245151030351563779411291975
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTC....................................................................................................................................................................................23210927.002185423237598921234203
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTA...................................................................................................................................................................................2426350.5012701185459159849936177
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTT...................................................................................................................................................................................2425397.0010794214438461388948551909
.........................................................................................................................................TCGTTAAAATGTCTGTGACCGTATG...........................................................................................................................................................................................................................2512362.002362711431622157
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTA....................................................................................................................................................................................2321668.0033363131794040270955
..................................................................................................................................................................................TATCACAGCCATTTTGACGA.......................................................................................................................................................................................2021504.0030081423289145162869120
...................................................................................................................................................................................ATCACAGCCATTTTGACGAG......................................................................................................................................................................................2021321.002642192981332755121
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAA..................................................................................................................................................................................2521306.00261265725239165041
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTAA...................................................................................................................................................................................2421299.00259849514088191631
......................................................................................................................................................................................ACAGCCATTTTGACGAGT.....................................................................................................................................................................................1821297.5025956994044563548620
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGA.....................................................................................................................................................................................2221193.5023873961215295166954
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTA...................................................................................................................................................................................2321158.00231637510076181117
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTC...................................................................................................................................................................................2421127.00225468518130173555693
....................................................................................................................................................................................TCACAGCCATTTTGACGAGT.....................................................................................................................................................................................2021065.502131495281024156311
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTC....................................................................................................................................................................................222945.0018903021218532
....................................................................................................................................................................................TCACAGCCATTTTGACGAGTT....................................................................................................................................................................................212877.50175550775212304
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTT...................................................................................................................................................................................232822.5016454353997142620312
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGC.....................................................................................................................................................................................212765.0015301000315161
..................................................................................................................................................................................TATCACAGCCATTTTGACGAC......................................................................................................................................................................................212533.501067121110620
.....................................................................................................................................................................................CACAGCCATTTTGACGAGT.....................................................................................................................................................................................192444.508891249427428
......................................................................................................................................................................................ACAGCCATTTTGACGAGTT....................................................................................................................................................................................192438.00876551231161344435
.....................................................................................................................................................................................CACAGCCATTTTGACGAGTT....................................................................................................................................................................................202429.008581062007473
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGG.....................................................................................................................................................................................222391.5078381210767832117
..................................................................................................................................................................................TATCACAGCCATTTTGACGATC.....................................................................................................................................................................................222320.00640014106241
..................................................................................................................................................................................TATCACAGCCATTTTGACG........................................................................................................................................................................................192295.005904131825291041
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTAA..................................................................................................................................................................................242274.00548151311235112
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTAAA..................................................................................................................................................................................252240.00480326241310125
.......................................................................................................................................................................................CAGCCATTTTGACGAGTT....................................................................................................................................................................................182198.00396480023460
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTG....................................................................................................................................................................................232165.003303774102702
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTG...................................................................................................................................................................................242164.003281182814301299
.........................................................................................................................................TCGTTAAAATGTCTGTGACCGTA.............................................................................................................................................................................................................................231147.0014738041311
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTC...................................................................................................................................................................................232144.50289113418256861
.........................................................................................................................................TCGTTAAAATGTCTGTGACCGTAT............................................................................................................................................................................................................................241137.0013781341174
....................................................................................................................................................................................TCACAGCCATTTTGACGAGC.....................................................................................................................................................................................202135.5027110102690
.................................................................................................................................................................................ATATCACAGCCATTTTGACGAGT.....................................................................................................................................................................................232108.50217146620621
.................................................................................................................................................................................ATATCACAGCCATTTTGACGAGTT....................................................................................................................................................................................24275.0015079121652
....................................................................................................................................................................................TCACAGCCATTTTGACGAG......................................................................................................................................................................................19272.5014587201550
.....................................................................................................................................................................................CACAGCCATTTTGACGAGC.....................................................................................................................................................................................19270.5014100001410
...................................................................................................................................................................................ATCACAGCCATTTTGACGA.......................................................................................................................................................................................19270.00140114302183
.........................................................................................................................................TCGTTAAAATGTCTGTGACCGT..............................................................................................................................................................................................................................22168.006871111399
.........................................................................................................................................TCGTTAAAATGTCTGTGACCGTATT...........................................................................................................................................................................................................................25160.006003632181
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTA....................................................................................................................................................................................22260.0012032201832
..................................................................................................................................................................................TATCACAGCCATTTTGACGAA......................................................................................................................................................................................21259.5011934475663
......................................................................................................................................................................................ACAGCCATTTTGACGAGC.....................................................................................................................................................................................18259.0011802761030
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTAA...................................................................................................................................................................................23255.5011155300512
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTT..................................................................................................................................................................................25253.50107451253618
..................................................................................................................................................................................TATCACAGCCATTTTGACGAAA.....................................................................................................................................................................................22253.0010647400541
.................................................................................................................................................................................ATATCACAGCCATTTTGACGAG......................................................................................................................................................................................22253.00106281411620
..................................................................................................................................................................................TATCACAGCCATTTTGACGAAC.....................................................................................................................................................................................22253.0010600101050
..................................................................................................................................................................................TATCACAGCCATTTTGACGAT......................................................................................................................................................................................21250.50101102146654
....................................................................................................................................................................................TCACAGCCATTTTGACGAGTC....................................................................................................................................................................................21247.50950000950
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGA.....................................................................................................................................................................................21246.509354114321
..................................................................................................................................................................................TATCACAGCCATTTTGAC.........................................................................................................................................................................................18242.508527101560
.........................................................................................................................................TCGTTAAAATGTCTGTGACCGTATGT---.......................................................................................................................................................................................................................26139.00390110370
droGri2
GGG-------------------------------------------CCGGTTCGTGCAGTCGCCGCCTCCTCCTGTTCCTCCTCCTTCTCC-TTTG-------TGTGTTTC----TTTCTTTCTTTCTTATACCATGTCGTTAAAATGCTTGTGACCTTATGT---ATT-TTATATCATATCACAGCCATTTTGACGAGTTTGGGTAAAGAAATGTCAACAGA-AAACA--------------GAAAAAAAATGCATTTA-CAAA-TGTACA-----------------------------------------------------------TT---------------------------------------------TCASizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTT....................................................................................................................................................................................23213424.5026849199406909
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGT.....................................................................................................................................................................................2224680.50936165102851
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTT...................................................................................................................................................................................2421118.50223711491088
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTT....................................................................................................................................................................................222891.00178217793
..................................................................................................................................................................................TATCACAGCCATTTTGACGAG......................................................................................................................................................................................212423.0084679551
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGT.....................................................................................................................................................................................212271.505435421
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTA...................................................................................................................................................................................24290.0018010476
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTT...................................................................................................................................................................................23260.001201200
..................................................................................................................................................................................TATCACAGCCATTTTGACG........................................................................................................................................................................................19256.501131130
....................................................................................................................................................................................TCACAGCCATTTTGACGAGTT....................................................................................................................................................................................21241.5083830
..................................................................................................................................................................................TATCACAGCCATTTTGACGA.......................................................................................................................................................................................20239.0078780
...................................................................................................................................................................................ATCACAGCCATTTTGACGAG......................................................................................................................................................................................20233.5067670
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTC....................................................................................................................................................................................23230.0060456
.................................................................................................................................................................................ATATCACAGCCATTTTGACGAGTT....................................................................................................................................................................................24221.5043430
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTA....................................................................................................................................................................................23220.50411427
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTG....................................................................................................................................................................................23220.5041635
.....................................................................................................................................................................................CACAGCCATTTTGACGAGTT....................................................................................................................................................................................20217.5035332
......................................................................................................................................................................................ACAGCCATTTTGACGAGTT....................................................................................................................................................................................19216.0032257
....................................................................................................................................................................................TCACAGCCATTTTGACGAGT.....................................................................................................................................................................................20215.5031310
..................................................................................................................................................................................TATCACAGCCATTTTGAC.........................................................................................................................................................................................18214.5029290
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTG...................................................................................................................................................................................24214.5029263
.................................................................................................................................................................................ATATCACAGCCATTTTGACGAGT.....................................................................................................................................................................................23212.0024240
.......................................................................................................................................................................................CAGCCATTTTGACGAGTT....................................................................................................................................................................................18211.5023230
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTT..................................................................................................................................................................................2529.5019127
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAA..................................................................................................................................................................................2529.001899
......................................................................................................................................................................................ACAGCCATTTTGACGAGT.....................................................................................................................................................................................1826.001293
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTC...................................................................................................................................................................................2426.0012111
...................................................................................................................................................................................ATCACAGCCATTTTGACG........................................................................................................................................................................................1826.0012120
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGA.....................................................................................................................................................................................2226.001293
.....................................................................................................................................................................................CACAGCCATTTTGACGAGT.....................................................................................................................................................................................1925.0010100
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTA...................................................................................................................................................................................2324.50990
...................................................................................................................................................................................ATCACAGCCATTTTGACGA.......................................................................................................................................................................................1923.50770
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTG..................................................................................................................................................................................2523.50770
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGC.....................................................................................................................................................................................2223.50743
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGG.....................................................................................................................................................................................2223.00660
....................................................................................................................................................................................TCACAGCCATTTTGACGAGTTT...................................................................................................................................................................................2222.50550
......................................................................................................................................................................................ACAGCCATTTTGACGAGTTT...................................................................................................................................................................................2022.50532
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTGG.................................................................................................................................................................................2612.00220
.................................................................................................................................................................................ATATCACAGCCATTTTGACGAGTTT...................................................................................................................................................................................2521.50330
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTA..................................................................................................................................................................................2521.50330
..........................................................................................................................................CGTTAAAATGCTTGTGACCTT..............................................................................................................................................................................................................................2111.00110
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTTGG.................................................................................................................................................................................2511.00110
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTGGCA...............................................................................................................................................................................2811.00110
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTG...................................................................................................................................................................................2321.00220
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTC...................................................................................................................................................................................2321.00220
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTGA...................................................................................................................................................................................2421.00202
.......................................................................................................................................TGTCGTTAAAATGCTTGTGACC................................................................................................................................................................................................................................2211.00110
.......................................................................................................................................TGTCGTTAAAATGCTTGTGAC.................................................................................................................................................................................................................................2111.00101
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTTT..................................................................................................................................................................................2421.00220
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTGG...................................................................................................................................................................................2421.00220
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTGGAC...............................................................................................................................................................................2811.00110
.....................................................................................................................................................................................CACAGCCATTTTGACGAGTTT...................................................................................................................................................................................2121.00220
.....................................................................................................................................................................................CACAGCCATTTTGACGAG......................................................................................................................................................................................1821.00220
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTC..................................................................................................................................................................................2531.00321
....................................................................................................................................................................................TCACAGCCATTTTGACGAG......................................................................................................................................................................................1921.00220
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTCC..................................................................................................................................................................................2530.67211
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTCC.................................................................................................................................................................................2630.67220
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGTTATC.................................................................................................................................................................................2520.50110
........................................................................................................................................................................................AGCCATTTTGACGAGTTT...................................................................................................................................................................................1820.50110
....................................................................................................................................................................................TCACAGCCATTTTGACGAGTTG...................................................................................................................................................................................2220.50110
...................................................................................................................................................................................ATCACAGCCATTTTGACGAGA.....................................................................................................................................................................................2120.50110
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTTTT.................................................................................................................................................................................2620.50101
................................................................................................................................................................................CATATCACAGCCATTTTGACGAGT.....................................................................................................................................................................................2420.50110
....................................................................................................................................................................................TCACAGCCATTTTGACGAGTA....................................................................................................................................................................................2120.50110
..................................................................................................................................................................................TATCACAGCCATTTTGACGAT......................................................................................................................................................................................2120.50101
................................................................................................................................................................................CATATCACAGCCATTTTGACGAGTTT...................................................................................................................................................................................2620.50110
.................................................................................................................................................................................ATATCACAGCCATTTTGACG........................................................................................................................................................................................2020.50110
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTGT..................................................................................................................................................................................2520.50110
..................................................................................................................................................................................TATCACAGCCATTTTGACGAGTTAT..................................................................................................................................................................................2520.50110
..................................................................................................................................................................................TATCACAGCCATTTTGACGAA......................................................................................................................................................................................2120.50110
....................................................................................................................................................................................TCACAGCCATTTTGACGAGTTA...................................................................................................................................................................................2220.50110

Generated: 10/20/2015 at 06:48 PM