ID:

dse-mir-13a

 Coordinate:

scaffold_0:10705068-10705142 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

3pUTR

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-31.4 -31.3 -31.2

Flybase annnotation

pre_miRNA [Dsec\mir-13a-RM]; utr3 [utr3_minus_7789]; miRNA [Dsec\miR-13a-RA]

No Repeatable elements found

Sense Strand Reads

AACGATTGGATGCTAAGCCAACAAGTGTTCGTGATCCAAGCCATAGTTCTTACGTAACTCCTCAAAGGGTTGTGAAATGTCGACTATTATCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAATCTGGTCAGCGGATCGAAAAACATATTTCATAACCGACTGAACCGC

******************************************.((((((.((((.(((((.((((((((((((((.(((................))).)))))))).)))))).))))).)))).))).)))..**************************************** 		Read size # Mismatch Hit Count Total Norm Total V114

embryo

 V115

head

 M054

female body

 V113

male body
.................................................................................................TATCACAGCCATTTTGATGAGTT....................................................... 23 0 1 46028.00 46028 33507 11369 606 546
.................................................................................................TATCACAGCCATTTTGATGAGT........................................................ 22 0 1 6525.00 6525 1443 4543 435 104
.................................................................................................TATCACAGCCAGCTTGATGAGCT....................................................... 23 3 1 1674.00 1674 1527 86 10 51
.................................................................................................TATCACAGCCATTTTGATGAG......................................................... 21 0 1 597.00 597 48 478 57 14
.........................................................CTCCTCAAAGGGTTGTGAAATG................................................................................................ 22 0 1 491.00 491 377 91 17 6
.....................................................................................................ACAGCCATTTTGATGAGTT....................................................... 19 0 1 290.00 290 223 67 0 0
.................................................................................................TATCACAGCCAGCTTGAGGAG......................................................... 21 3 4 188.25 753 351 316 22 64
.................................................................................................TATCACAGCCATTTTGATGAGTTT...................................................... 24 0 1 165.00 165 81 72 4 8
.................................................................................................TATCACAGCCATTTTGATGAGCT....................................................... 23 1 1 143.00 143 120 22 1 0
.................................................................................................TATTACAGCCATTTTGATGAGTT....................................................... 23 1 1 112.00 112 107 5 0 0
.................................................................................................TATCACGGCCATTTTGATGAGTT....................................................... 23 1 1 111.00 111 59 49 0 3
...................................................................................................TCACAGCCAGCTTGATGAGCT....................................................... 21 3 8 110.88 887 746 95 2 44
.................................................................................................TATCACACCCATTTTGATGAGTT....................................................... 23 1 1 84.00 84 61 17 5 1
.................................................................................................TATCACAGCCAGCTTGATGAGC........................................................ 22 3 1 81.00 81 69 9 2 1
.................................................................................................TATCGCAGCCATTTTGATGAGTT....................................................... 23 1 1 70.00 70 54 16 0 0
.................................................................................................TATCACAGCCAGCTTGATGAGCTT...................................................... 24 3 1 69.00 69 50 9 2 8
..................................................................................................ATCACAGCCATTTTGATGAGTT....................................................... 22 0 1 68.00 68 8 2 58 0
.................................................................................................TATCACAGCTATTTTGATGAGTT....................................................... 23 1 1 68.00 68 64 4 0 0
................................................................................................CTATCACAGCCATTTTGATGAGTT....................................................... 24 1 1 67.00 67 48 17 0 2
.................................................................................................TATCACAGTCATTTTGATGAGTT....................................................... 23 1 1 66.00 66 63 3 0 0
.................................................................................................TATCACAGCCATTTTGATGGGTT....................................................... 23 1 1 65.00 65 47 18 0 0
...................................................................................................TATCAGCCATTTTGATGAGTT....................................................... 21 2 2 60.50 121 115 6 0 0
...................................................................................................TCACAGCCATTTTGATGAGTT....................................................... 21 0 1 58.00 58 52 3 3 0
.................................................................................................TATCACAGCCATTTTGATGATTT....................................................... 23 1 1 56.00 56 27 12 17 0
.................................................................................................TATCATAGCCATTTTGATGAGTT....................................................... 23 1 1 53.00 53 45 5 2 1
.................................................................................................TATCACAGCCATTTTGATGAGTTA...................................................... 24 1 1 52.00 52 36 12 3 1
.................................................................................................TATCACAGCCATTTTGATG........................................................... 19 0 1 52.00 52 0 45 7 0
.................................................................................................TATCACAGCCATTTTGAAGAGTT....................................................... 23 1 3 52.00 156 12 28 112 4
.....................................................................................................ACAGCCATTTTGATGAGT........................................................ 18 0 1 51.00 51 9 42 0 0
.................................................................................................TATCACTGCCATTTTGATGAGTT....................................................... 23 1 1 51.00 51 46 5 0 0
.................................................................................................TATCACAGCCATTTTGAAGAGT........................................................ 22 1 3 51.00 153 16 95 34 8
.................................................................................................TATCACAGCCATTTCGATGAGTT....................................................... 23 1 1 50.00 50 43 6 1 0
.................................................................................................CATCACAGCCATTTTGATGAGTT....................................................... 23 1 1 50.00 50 39 10 1 0
.................................................................................................TATCACATCCATTTTGATGAGTT....................................................... 23 1 1 49.00 49 25 23 0 1
.................................................................................................TATCACAGCCATTTTGCTGAGTT....................................................... 23 1 1 47.00 47 38 8 0 1
.................................................................................................TATCACAGCCATTTTGGTGAGTT....................................................... 23 1 1 45.00 45 36 9 0 0
.................................................................................................TATCACAGCCACTTTGATGAGTT....................................................... 23 1 1 44.00 44 35 7 0 2
.................................................................................................TATCACAGCCATCTTGATGAGTT....................................................... 23 1 1 42.00 42 34 8 0 0
.................................................................................................TATCACAACCATTTTGATGAGTT....................................................... 23 1 1 40.00 40 25 15 0 0
.................................................................................................TATCACAGCCATTTTGATAAGTT....................................................... 23 1 1 38.00 38 14 20 0 4
.................................................................................................TACCACAGCCATTTTGATGAGTT....................................................... 23 1 1 38.00 38 32 5 0 1
.................................................................................................TATCACAGCCATTTTGATGAGTC....................................................... 23 1 1 37.00 37 27 8 1 1
.................................................................................................TATCACAGCCGTTTTGATGAGTT....................................................... 23 1 1 37.00 37 31 6 0 0
.................................................................................................TATCACAGCCAGCTTGATGAG......................................................... 21 2 1 35.00 35 24 7 4 0
.................................................................................................TATCACAGCCATTTTGATGAGTA....................................................... 23 1 1 35.00 35 11 23 1 0
.................................................................................................TATCACGGCCATTTTGATGAGT........................................................ 22 1 1 33.00 33 3 30 0 0
.................................................................................................TATCACAGCCATTTTGATTAGT........................................................ 22 1 1 33.00 33 6 24 3 0
.................................................................................................TATCACAGCCATTTTGATGAGTTC...................................................... 24 1 1 32.00 32 18 13 0 1
.................................................................................................TATCACAGCAATTTTGATGAGTT....................................................... 23 1 1 32.00 32 7 25 0 0
.................................................................................................TATCACAGCCATTTTGATGA.......................................................... 20 0 1 31.00 31 0 27 4 0
.................................................................................................TATCACAGACATTTTGATGAGTT....................................................... 23 1 1 30.00 30 23 5 2 0
.................................................................................................TGTCACAGCCATTTTGATGAGTT....................................................... 23 1 1 30.00 30 16 13 1 0
.................................................................................................TATCACAGCCATTTTGATTAGTT....................................................... 23 1 1 29.00 29 13 12 0 4
..........................................................TCCTCAAAGGGTTGTGAAATG................................................................................................ 21 0 1 27.00 27 8 18 1 0
..................................................................................................ATCACAGCCATTTTGATGAGT........................................................ 21 0 1 27.00 27 0 1 26 0
.................................................................................................TATCACAGCCATTTTGATGCGTT....................................................... 23 1 1 26.00 26 20 6 0 0
.................................................................................................TATCACAGCCATTTTGATCAGTT....................................................... 23 1 1 26.00 26 15 9 0 2
.................................................................................................TCTCACAGCCATTTTGATGAGTT....................................................... 23 1 1 24.00 24 23 1 0 0
.................................................................................................TATCACAGCCGCTTTGATGAGCT....................................................... 23 3 1 24.00 24 24 0 0 0
.................................................................................................TATCACAGCCATTTTGATCAGT........................................................ 22 1 1 22.00 22 4 16 1 1
.................................................................................................TATAACAGCCATTTTGATGAGTT....................................................... 23 1 1 22.00 22 3 13 6 0
.................................................................................................TATCACAGCCATTTAGATGAGTT....................................................... 23 1 1 21.00 21 20 0 1 0
.................................................................................................TATCTCAGCCATTTTGATGAGTT....................................................... 23 1 1 20.00 20 17 2 1 0
.................................................................................................TATCACAGCCCTTTTGATGAGTT....................................................... 23 1 1 19.00 19 10 7 2 0
.................................................................................................GATCACAGCCATTTTGATGAGTT....................................................... 23 1 1 19.00 19 16 3 0 0
.................................................................................................TATCAAAGCCATTTTGATGAGTT....................................................... 23 1 1 18.00 18 4 14 0 0
.................................................................................................TATCACAGCCATATTGATGAGTT....................................................... 23 1 1 17.00 17 16 1 0 0
.................................................................................................TATCACAGCCATTTTGATGAGCTA...................................................... 24 2 1 17.00 17 16 1 0 0
.................................................................................................TATCACAGCCATTATGATGAGTT....................................................... 23 1 1 17.00 17 16 1 0 0
.................................................................................................AATCACAGCCATTTTGATGAGTT....................................................... 23 1 1 16.00 16 6 10 0 0
.................................................................................................TATCACAGCCATTTTAATGAGTT....................................................... 23 1 1 15.00 15 14 1 0 0
.................................................................................................TATCACATCCATTTTGATGAGT........................................................ 22 1 1 15.00 15 2 10 2 1
.................................................................................................TATCACAGCCATTCTGATGAGTT....................................................... 23 1 1 15.00 15 12 3 0 0
.................................................................................................TATCACAGCCATTTTGATGACTT....................................................... 23 1 1 15.00 15 13 2 0 0
.................................................................................................TATCACAGCCATTTTGAGGAGT........................................................ 22 1 3 14.33 43 11 28 3 1
...................................................................................................TCACAGCCAGCTTGATGAGCTT...................................................... 22 3 2 14.00 28 12 11 0 5
.................................................................................................TATCACAGCCATTTTGATGAGC........................................................ 22 1 1 13.00 13 5 8 0 0
.................................................................................................TATCACCGCCATTTTGATGAGTT....................................................... 23 1 1 13.00 13 9 3 1 0
.................................................................................................TATCACAGCCATTTTGATGTGTT....................................................... 23 1 1 12.00 12 9 3 0 0
.................................................................................................TATTACAGCCATTTTGATGAGT........................................................ 22 1 1 12.00 12 7 4 1 0
.................................................................................................TATCACAGCCATTTTGATGAGA........................................................ 22 1 1 12.00 12 1 10 1 0
.................................................................................................TATCACAGCCATTTTGATGATT........................................................ 22 1 1 12.00 12 1 2 9 0
.................................................................................................TATCACAGCCATTTTGTTGAGTT....................................................... 23 1 1 12.00 12 9 3 0 0
.................................................................................................TATAACAGCCATTTTGAAGAGTT....................................................... 23 2 3 11.67 35 0 0 35 0
.........................................................TTCTTCAAAGTGTTGTGAAATG................................................................................................ 22 3 2 11.50 23 10 4 2 7
.................................................................................................TATCACAGCCATTTTGATGAGAT....................................................... 23 1 1 11.00 11 4 6 1 0
.................................................................................................TATCACAGTCATTTTGATGAGT........................................................ 22 1 1 11.00 11 5 5 1 0
.................................................................................................TATCACAGCCATTTTGATGAGTTAA..................................................... 25 2 1 11.00 11 5 3 2 1
.................................................................................................TATCACACCCATTTTGATGAGT........................................................ 22 1 1 11.00 11 4 6 1 0
.................................................................................................TGTCACAGCCATTTTGATGAGT........................................................ 22 1 1 11.00 11 3 8 0 0
.................................................................................................TATCACAGCCATTTTCATGAGTT....................................................... 23 1 1 10.00 10 6 4 0 0
.................................................................................................TATCACAGCCATTTTGATGAATT....................................................... 23 1 1 10.00 10 5 5 0 0
.................................................................................................TATCACAGGCATTTTGATGAGTT....................................................... 23 1 1 10.00 10 9 0 0 1
.................................................................................................TATCCCAGCCATTTTGATGAGTT....................................................... 23 1 1 10.00 10 7 2 0 1
......................................................................................................CAGCCATTTTGATGAGTT....................................................... 18 0 1 10.00 10 10 0 0 0
...................................................................................................TCACAGCCAGCTTGATGAG......................................................... 19 2 2 9.50 19 10 7 2 0
.................................................................................................TAACACAGCCATTTTGATGAGTT....................................................... 23 1 1 9.00 9 7 2 0 0
.................................................................................................TATCACAGCCAATTTGATGAGTT....................................................... 23 1 1 9.00 9 9 0 0 0
.................................................................................................TATCACAGCCATTTTTATGAGTT....................................................... 23 1 1 9.00 9 4 5 0 0
.................................................................................................TATCGCAGCCATTTTGATGAGT........................................................ 22 1 1 9.00 9 2 7 0 0
.................................................................................................TATCACAGCCATTTTGGTGAGT........................................................ 22 1 1 8.00 8 1 7 0 0
.................................................................................................CATCACAGCCATTTTGATGAGT........................................................ 22 1 1 8.00 8 2 5 1 0
.................................................................................................TTTCACAGCCATTTTGATGAGTT....................................................... 23 1 1 8.00 8 7 0 1 0
.................................................................................................TATCACAGCCATTTTGATGACT........................................................ 22 1 1 8.00 8 1 7 0 0
.................................................................................................TATCATAGCCATTTTGATGAGT........................................................ 22 1 1 8.00 8 6 1 1 0
................................................................................................CTATCACAGCCATTTTGATGAGT........................................................ 23 1 1 7.00 7 0 5 2 0
.................................................................................................TATCACAGCCATTTTGATGGGT........................................................ 22 1 1 7.00 7 1 6 0 0
..................................................................................................TTCACAGCCATTTTGATGAGTT....................................................... 22 1 1 7.00 7 6 0 1 0
.................................................................................................TATCACAGACATTTTGATGAGT........................................................ 22 1 1 6.00 6 1 3 2 0
..................................................................................................ATCACAGCCATTTTGATGAG......................................................... 20 0 1 6.00 6 0 0 6 0
.................................................................................................TATCACAGCCACTTTGATGAG......................................................... 21 1 1 6.00 6 1 1 4 0
.................................................................................................TATCACAGCCATTTTGATAAGT........................................................ 22 1 1 6.00 6 0 6 0 0
.................................................................................................TATCACAGCCATCTTGATGAGT........................................................ 22 1 1 6.00 6 3 3 0 0
.................................................................................................TATCACAGCCATTTTGAGGAGTT....................................................... 23 1 3 6.00 18 4 6 2 6
.................................................................................................TATCACAGCCATTCTGATGAGT........................................................ 22 1 1 6.00 6 1 4 0 1
.................................................................................................TATCACCGCCATTTTGATGAGT........................................................ 22 1 1 6.00 6 0 1 5 0
.................................................................................................TATCACAGCTATTTTGATGAGT........................................................ 22 1 1 5.00 5 3 2 0 0
....................................................................................................CACAGCCATTTTGATGAGTT....................................................... 20 0 1 5.00 5 5 0 0 0
.................................................................................................TATCACAGCCATTTTCATGAGT........................................................ 22 1 1 5.00 5 1 4 0 0
.................................................................................................TATCACAGCCACTTTGATGAGT........................................................ 22 1 1 5.00 5 0 4 1 0
.................................................................................................TATCACAGCCACTTTGATGAGCT....................................................... 23 2 1 5.00 5 2 1 2 0
.................................................................................................TATCACAGCCCTTTTGATGAGT........................................................ 22 1 1 5.00 5 2 3 0 0
.................................................................................................TATCACAGCCATTTTGATGCGT........................................................ 22 1 1 5.00 5 1 4 0 0
.................................................................................................AATCACAGCCATTTTGATGAGT........................................................ 22 1 1 5.00 5 0 5 0 0
................................................................................................CTATCACAGCCATTTTGATGAG......................................................... 22 1 1 5.00 5 0 4 1 0
..................................................................................................ATCACAGCCAGCTTGATGAGCT....................................................... 22 3 2 4.50 9 8 0 0 1
.................................................................................................TATCACAGCCAGCTTGAGGA.......................................................... 20 3 8 4.38 35 10 22 2 1
.................................................................................................TATCACAGCCATTTTGACGAGTTAC..................................................... 25 2 3 4.33 13 10 0 3 0
.................................................................................................TATCACAGCCAGCTTGAGGAGT........................................................ 22 3 3 4.33 13 2 7 1 3
.................................................................................................TATCACAGCCACTTTGAGGAG......................................................... 21 2 4 4.25 17 2 4 8 3
.................................................................................................TATCACAGCCCTTTTGCTGAGTT....................................................... 23 2 1 4.00 4 4 0 0 0
.................................................................................................TATCACAGCCATTTTGAAGAG......................................................... 21 1 3 4.00 12 1 2 9 0
.................................................................................................TATCACAGCCATTTTGATGAGG........................................................ 22 1 1 4.00 4 2 2 0 0
.................................................................................................TATCACAGCCAGCTTTATGAG......................................................... 21 3 2 4.00 8 1 3 3 1
.................................................................................................TATCACGGCCATTTTGATGAG......................................................... 21 1 1 4.00 4 0 4 0 0
.................................................................................................TATCACAGCCTTTTTGATGAGTT....................................................... 23 1 1 4.00 4 3 0 1 0
.................................................................................................TATAACAGCCATTTTGAAGAGT........................................................ 22 2 3 4.00 12 0 0 12 0
.........................................................CTCCTCAAAGGGTTGTGTT................................................................................................... 19 2 1 4.00 4 0 2 2 0
.................................................................................................TATCACAGCAATTTTGATGAGT........................................................ 22 1 1 4.00 4 0 4 0 0
.................................................................................................TATCACAACCATTTTGATGAGT........................................................ 22 1 1 4.00 4 0 3 1 0
.................................................................................................TATCACAGCCATTTCGATGAGT........................................................ 22 1 1 4.00 4 2 2 0 0
.........................................................CTCCTCAAAGGGTTGTGAA................................................................................................... 19 0 1 4.00 4 4 0 0 0
.................................................................................................TACCACAGCCATTTTGATGAGT........................................................ 22 1 1 4.00 4 2 2 0 0
.............................................................TCAAAGGGTTGTGAAATG................................................................................................ 18 0 1 4.00 4 0 3 1 0
.........................................................CTCCTCAAAGGGTTGTGA.................................................................................................... 18 0 1 4.00 4 1 3 0 0
.................................................................................................TATCACAGCCATTTTGCTGAGT........................................................ 22 1 1 4.00 4 0 4 0 0
.................................................................................................GATCACAGCCATTTTGATGAGT........................................................ 22 1 1 4.00 4 0 4 0 0
.................................................................................................TATCACAGCCATTTTGAAGAGTTA...................................................... 24 2 3 3.33 10 1 0 9 0
.................................................................................................TATCACAGCCATTTTGAAAAGT........................................................ 22 2 5 3.20 16 0 16 0 0
.................................................................................................TATCACAGCCATTTTGATGAGCTT...................................................... 24 1 1 3.00 3 3 0 0 0
.........................................................CTCCTCAAAGGGTTGTGAAA.................................................................................................. 20 0 1 3.00 3 1 1 1 0
.................................................................................................TATCACAACAATTTTGATGAGTT....................................................... 23 2 1 3.00 3 0 3 0 0
.................................................................................................TACCACAGCCATTTTGATGAG......................................................... 21 1 1 3.00 3 0 2 1 0
.................................................................................................TATAACAGCCATTTTGATGAGT........................................................ 22 1 1 3.00 3 0 0 3 0
.................................................................................................TAGCACAGCCATTTTGATGAGTT....................................................... 23 1 1 3.00 3 2 0 1 0
.................................................................................................TATCACAACCATTTTGATGAG......................................................... 21 1 1 3.00 3 0 3 0 0
...................................................................................................TCACAGCCAGTTTGATGAGCT....................................................... 21 2 1 3.00 3 3 0 0 0
.................................................................................................TATCAGAGCCATTTTGATGAGTT....................................................... 23 1 1 3.00 3 3 0 0 0
...................................................................................................TCACAGCCATTTTGATGAGT........................................................ 20 0 1 3.00 3 1 2 0 0
.................................................................................................TATCACAGCCATTAAGATGAGTT....................................................... 23 2 1 3.00 3 3 0 0 0
.........................................................CTCCTCAAAGGGTTGTGAAAT................................................................................................. 21 0 1 3.00 3 3 0 0 0
.................................................................................................TATCACAGCCATTTGGATGAGTT....................................................... 23 1 1 3.00 3 3 0 0 0
.................................................................................................TATCACAGCAATTTTGATGAG......................................................... 21 1 1 3.00 3 0 3 0 0
.................................................................................................TATCACAGCCATTTTTATGAGT........................................................ 22 1 1 3.00 3 0 2 1 0
.........................................................CTCCTCAAAGTGTTGTGAAATG................................................................................................ 22 1 1 3.00 3 3 0 0 0
.................................................................................................TATCACAGCCGTTTTGATGAGT........................................................ 22 1 1 3.00 3 1 2 0 0
.................................................................................................TATCACATCCATTTTGATGAG......................................................... 21 1 1 3.00 3 0 3 0 0
.................................................................................................TACAACAGCCATTTTGATGAGTT....................................................... 23 2 1 3.00 3 1 2 0 0
.................................................................................................TATCACAGCCATTTTGAT............................................................ 18 0 1 3.00 3 1 2 0 0
.................................................................................................TATCACAGCCATTTTTTTGAGTT....................................................... 23 2 1 3.00 3 3 0 0 0
.................................................................................................TATCACAGCCATTTTGAAGAGTTT...................................................... 24 1 3 3.00 9 1 4 2 2
.................................................................................................TATCACAGCGATTTTGATGAGTT....................................................... 23 1 1 3.00 3 1 2 0 0
...................................................................................................TCACAGCCACTTTGATGAGCT....................................................... 21 2 2 3.00 6 3 1 0 2
.................................................................................................TATCTCAGCCATTTTGATGAGT........................................................ 22 1 1 3.00 3 1 2 0 0
.................................................................................................TATCACAGCCATTTTGATGGG......................................................... 21 1 1 3.00 3 1 2 0 0
.................................................................................................TATAACAGCCATGTTGAAGAGTT....................................................... 23 3 3 2.33 7 0 0 7 0
...................................................................................................TCACAGCCAGTTTGATGAGCTA...................................................... 22 3 3 2.33 7 7 0 0 0
.................................................................................................TATCACAGCCATTTTGACGAGTTCC..................................................... 25 2 3 2.33 7 0 7 0 0
.................................................................................................TATCACAGCCATTTTGAGT........................................................... 19 2 5 2.20 11 4 6 1 0
...................................................................................................TCACAGCCACTTTGATGAGCTT...................................................... 22 2 1 2.00 2 1 0 0 1
.................................................................................................TATCACAGCCATTGTGATGAGTT....................................................... 23 1 1 2.00 2 2 0 0 0
.................................................................................................TAAAACAGCCATTTTGATGAGTT....................................................... 23 2 1 2.00 2 0 2 0 0
................................................................................................ATATCACAGCCATTTTGATGAGTT....................................................... 24 0 1 2.00 2 2 0 0 0
.................................................................................................TATCACAGCCAGCTTGATGAGTT....................................................... 23 2 1 2.00 2 2 0 0 0
.................................................................................................TATAACAGACATTTTGAAGAGTT....................................................... 23 3 4 2.00 8 0 0 8 0
.................................................................................................TATCACAGCCATTTTGATGAT......................................................... 21 1 1 2.00 2 0 1 1 0
.................................................................................................TATCAAAGCCATTTTGATGAGT........................................................ 22 1 1 2.00 2 0 2 0 0
..........................................................TCTTCAAAGTGTTGTGAAATG................................................................................................ 21 2 1 2.00 2 2 0 0 0
.................................................................................................TATCACAGCCATTTTGATGAGTTAAA.................................................... 26 3 1 2.00 2 2 0 0 0
.................................................................................................TATAACCGCCATTTTGAAGAGTT....................................................... 23 3 3 2.00 6 0 0 6 0
.................................................................................................TATCACACCCCTTTTGATGAGTT....................................................... 23 2 1 2.00 2 2 0 0 0
.................................................................................................TATCACAGCCAATTTGATGAGT........................................................ 22 1 1 2.00 2 0 2 0 0
.........................................................CTTCTCAAAGGGTTGTGAAATG................................................................................................ 22 1 1 2.00 2 2 0 0 0
....................................................................................................TACAGCCATTTTGATGAGTT....................................................... 20 1 1 2.00 2 2 0 0 0
.................................................................................................TATCACAGCCAGTTTGATGAGTT....................................................... 23 1 1 2.00 2 1 1 0 0
.................................................................................................TATCACAGCCATTTTGATGT.......................................................... 20 1 1 2.00 2 0 2 0 0
.................................................................................................TATCACTGCCATTTTGATGAG......................................................... 21 1 1 2.00 2 0 2 0 0
.................................................................................................TATCACATCCATTTTGCTGAGTT....................................................... 23 2 1 2.00 2 0 2 0 0
.................................................................................................TATCACAGCCATTTTGATGAGTGT...................................................... 24 1 1 2.00 2 0 2 0 0
...................................................................................................TTACAGCCATTTTGATGAGTT....................................................... 21 1 1 2.00 2 2 0 0 0
.................................................................................................TATCACAGCCATTTTGATTAGTTT...................................................... 24 1 1 2.00 2 2 0 0 0
.................................................................................................TAACACAGCCATTTTGATGAGT........................................................ 22 1 1 2.00 2 1 0 1 0
.................................................................................................TATTACAGCCGTTTTGATGAGTT....................................................... 23 2 1 2.00 2 2 0 0 0
...................................................................................................TCACAGCCAGCTTGATGAGC........................................................ 20 3 13 2.00 26 15 9 2 0
.................................................................................................TGTCACAGCCATTTTGATGAG......................................................... 21 1 1 2.00 2 0 2 0 0
.................................................................................................TATCACAGCCATTTTGATGAGTTG...................................................... 24 1 1 2.00 2 1 1 0 0
.................................................................................................TATCACAGCCATTTTGATCAG......................................................... 21 1 1 2.00 2 0 2 0 0
.................................................................................................TATCACAGCCATTTTGAACAGT........................................................ 22 2 3 2.00 6 0 6 0 0
.................................................................................................TATGACAGCCATTTTGATGAGT........................................................ 22 1 1 2.00 2 0 1 1 0
..................................................................................................TACACAGCCATTTTGATGAGTT....................................................... 22 2 1 2.00 2 0 1 0 1
.................................................................................................TATCACAGCCATATTGATGAGT........................................................ 22 1 1 2.00 2 1 1 0 0
.................................................................................................TATGACAGCCATTTTGATGAGTT....................................................... 23 1 1 2.00 2 1 1 0 0
.....................................................................................................ACAACCATTTTGATGAGTT....................................................... 19 1 1 2.00 2 1 1 0 0
.................................................................................................TATCACACCAATTTTGATGAGTT....................................................... 23 2 1 2.00 2 0 2 0 0
.................................................................................................TATCACACCCATTTTGATGAG......................................................... 21 1 1 2.00 2 0 2 0 0
.................................................................................................TATCACAGCCAGTTTGATGAGCT....................................................... 23 2 1 2.00 2 2 0 0 0
..........................................................TCCTCAAAGGGTTGTGAAA.................................................................................................. 19 0 1 2.00 2 0 1 1 0
.................................................................................................TATCACAGTCATTTTGATGAGTTT...................................................... 24 1 1 2.00 2 2 0 0 0
...................................................................................................TCACAGCCGCTTTGATGAGCT....................................................... 21 3 6 1.83 11 10 0 0 1
.................................................................................................TATCACAGCCATGTTGAAGAGTT....................................................... 23 2 3 1.67 5 0 0 5 0
...................................................................................................TATCAGCCATTTTGATGAGT........................................................ 20 2 3 1.67 5 3 2 0 0
.................................................................................................TATATCAGCCATTTTGATGAGTT....................................................... 23 2 2 1.50 3 3 0 0 0
.................................................................................................TATCACAGCCATTTTGACGAGTTACA.................................................... 26 3 3 1.33 4 3 0 1 0
.................................................................................................TATCACAGCCAGCTTGATGA.......................................................... 20 2 3 1.33 4 0 2 2 0
.................................................................................................TATCACAGCCATTTTGAGGAG......................................................... 21 1 3 1.33 4 0 4 0 0
.................................................................................................TATCACAGCCACTTTGAGGAGC........................................................ 22 3 4 1.25 5 1 0 4 0
.................................................................................................TATCACAGCCATTTTGAAAAGTT....................................................... 23 2 5 1.20 6 0 6 0 0
.................................................................................................TATCCCAGCCATTTTGATGAGCT....................................................... 23 2 1 1.00 1 1 0 0 0
.................................................................................................TATCACAGCCACATTGATGAGTT....................................................... 23 2 1 1.00 1 1 0 0 0
.................................................................................................TATCACAGCCATTTTGATTAGCT....................................................... 23 2 1 1.00 1 0 0 1 0
.........................................................CTCCTCATAGGGTTGTGAAATG................................................................................................ 22 1 1 1.00 1 1 0 0 0
..................................................................................................CTCACAGCCATTTTGATGAGT........................................................ 21 1 1 1.00 1 0 1 0 0
...................................................................................................TCACAGCCAGCTTGATGAGTT....................................................... 21 2 1 1.00 1 1 0 0 0
.................................................................................................TATCAAAGCCATTTTGATGAGCT....................................................... 23 2 1 1.00 1 0 1 0 0
.....................................................................................................ACAGCCAATTTGATGAGTT....................................................... 19 1 1 1.00 1 0 1 0 0
.................................................................................................TATCACAGCGATTTTGATGAGT........................................................ 22 1 1 1.00 1 0 1 0 0
.................................................................................................TATCACAGCCCTTTTGATGCGTT....................................................... 23 2 1 1.00 1 1 0 0 0
.................................................................................................TATCACAGCCATTTTGCTGAGAG....................................................... 23 3 1 1.00 1 1 0 0 0
.........................................................CTCCTCAAAGGGTTGTTAAATG................................................................................................ 22 1 1 1.00 1 0 0 1 0
.................................................................................................TATCACAGCCATTTAGATGAGT........................................................ 22 1 1 1.00 1 1 0 0 0
.................................................................................................AATCACAGCCATTTTGATGAG......................................................... 21 1 1 1.00 1 0 1 0 0
..................................................................................................ATCACAGCCAGCTTGATGAG......................................................... 20 2 1 1.00 1 0 0 1 0
.................................................................................................GATCACAGCCATTTTGATGAG......................................................... 21 1 1 1.00 1 1 0 0 0
............................................................................................CCTATTATCACAGCCATTTTGATGAGTT....................................................... 28 3 1 1.00 1 0 0 1 0
.................................................................................................TACCACAGCCATTTTTATGAGT........................................................ 22 2 1 1.00 1 0 1 0 0
.................................................................................................TATAACAGCCATTTTGATGAG......................................................... 21 1 1 1.00 1 0 1 0 0
.........................................................CTCCTCAAAGGGTTGTAAAATG................................................................................................ 22 1 1 1.00 1 1 0 0 0
.................................................................................................TATCACCGCCATTTTGATTAGT........................................................ 22 2 1 1.00 1 0 0 1 0
.................................................................................................TATCACAAACATTTTGATGAGTT....................................................... 23 2 1 1.00 1 0 1 0 0
.................................................................................................TATTACAGCCATTTTGATGAGTTT...................................................... 24 1 1 1.00 1 1 0 0 0
.................................................................................................TATCACAGCAATTTTGATGACTT....................................................... 23 2 1 1.00 1 1 0 0 0
.........................................................CTCCTCAAAGGGTTGTGAAATA................................................................................................ 22 1 1 1.00 1 1 0 0 0
.................................................................................................TATCACAGCTATTTTGATGAGTTT...................................................... 24 1 1 1.00 1 1 0 0 0
.................................................................................................TATCACAGCCAATCTGATGAGTT....................................................... 23 2 1 1.00 1 1 0 0 0
.................................................................................................TATCACAGCCATTTTGGTGAG......................................................... 21 1 1 1.00 1 0 1 0 0
.........................................................CTCCTCAAAGGGTTGCGAAATG................................................................................................ 22 1 1 1.00 1 1 0 0 0
.................................................................................................TATCACAGCCATTTTGATGAC......................................................... 21 1 1 1.00 1 0 0 1 0
.....................................................................................................ACAGCCATTTTGATGGGTT....................................................... 19 1 1 1.00 1 1 0 0 0
.................................................................................................TATTACAGCCATTTTGATGAGC........................................................ 22 2 1 1.00 1 0 1 0 0
.................................................................................................TATCAAAGACATTTTGATGAGTT....................................................... 23 2 1 1.00 1 1 0 0 0
......................................................................................................................GTTCGTTCCAATCTGGTCAGC.................................... 21 3 1 1.00 1 0 0 1 0
.....................................................................................................ACAGCCATTTTGATGAGC........................................................ 18 1 1 1.00 1 0 1 0 0
.................................................................................................TATCACAGCCATTTTGATA........................................................... 19 1 2 1.00 2 0 2 0 0
..........................................................TCCTCAAAGGGTTGTGAAAT................................................................................................. 20 0 1 1.00 1 0 1 0 0
.................................................................................................TATCACAGCCATCTTGATGAG......................................................... 21 1 1 1.00 1 1 0 0 0
.................................................................................................TATCACAGCCATTTTGATGCGTTT...................................................... 24 1 1 1.00 1 1 0 0 0
................................................................................................CTATGACAGCCATTTTGATGAGT........................................................ 23 2 1 1.00 1 0 1 0 0
..................................................................................................ATCACAGCCATTTTGATGAGTC....................................................... 22 1 1 1.00 1 0 1 0 0
.................................................................................................TATCAAAGCCATTTTGATGAGC........................................................ 22 2 1 1.00 1 0 1 0 0
.................................................................................................TATTACTGCCATTTTGATGAGTT....................................................... 23 2 1 1.00 1 1 0 0 0
.................................................................................................TATCATAGCCATTTTGATGAGA........................................................ 22 2 1 1.00 1 0 0 1 0
.................................................................................................TATCACAGCCATTTTGATCCGTT....................................................... 23 2 1 1.00 1 1 0 0 0
.........................................................CTCCCCAAAGGGTTGTGAAATG................................................................................................ 22 1 1 1.00 1 1 0 0 0
.................................................................................................TATCACAGCCGTTTTGATGGGTT....................................................... 23 2 1 1.00 1 0 1 0 0
.................................................................................................TATCACGGCCATTTTGATG........................................................... 19 1 1 1.00 1 0 1 0 0
.................................................................................................TATCACAGCCACTTTGATGAA......................................................... 21 2 1 1.00 1 0 0 1 0
..................................................................................................ATCACAGCCATTTTGATGAGG........................................................ 21 1 1 1.00 1 0 0 1 0
..................................................................................................AGCACAGCCATTTTGATGAGTT....................................................... 22 1 1 1.00 1 0 0 1 0
.................................................................................................TATCACTGCCATTTTGATGAGT........................................................ 22 1 1 1.00 1 1 0 0 0
..................................................................................................ATCACAGCCATTTTGATGATTT....................................................... 22 1 1 1.00 1 0 0 1 0
.................................................................................................TATCACAGCCATTTTGATGAAA........................................................ 22 2 1 1.00 1 0 0 1 0
.................................................................................................TATCACAGCCTTTTTGATGAG......................................................... 21 1 1 1.00 1 0 1 0 0
.................................................................................................TATCACAGCCCTTTTGATGAGCT....................................................... 23 2 1 1.00 1 1 0 0 0
.................................................................................................TATCACACCCATTTTGCTGAGTT....................................................... 23 2 1 1.00 1 1 0 0 0
.................................................................................................TATCACAGCCATTTTGATGAAT........................................................ 22 1 1 1.00 1 0 1 0 0
.................................................................................................TCTCACAGCCATTTTTATGAGTT....................................................... 23 2 1 1.00 1 0 1 0 0
.....................................................................................................ACAGCCATTTTGATGTGTT....................................................... 19 1 1 1.00 1 1 0 0 0
.................................................................................................TATCACAGCCATTTTGATTAGTTC...................................................... 24 2 1 1.00 1 0 1 0 0
.................................................................................................TATCACAGCCATTTTTATGAG......................................................... 21 1 1 1.00 1 0 1 0 0
.................................................................................................TATAACAGCCATGTTGAAGAG......................................................... 21 3 3 1.00 3 0 0 3 0
.................................................................................................TCACACCGCCATTTTGATGAGTT....................................................... 23 3 1 1.00 1 1 0 0 0
.................................................................................................TATCATGGCCATTTTGATGAGTT....................................................... 23 2 1 1.00 1 0 1 0 0
..................................................................................................ATCACAGCCATTTTTATGAGTT....................................................... 22 1 1 1.00 1 0 0 1 0
.................................................................................................TGTCACAGCCATTTTGATGAGTTT...................................................... 24 1 1 1.00 1 0 1 0 0
.................................................................................................TATCACAGCCAATTTGATGAGTTT...................................................... 24 1 1 1.00 1 0 0 0 1
.................................................................................................TCTCACAGCCATTTTGCTGAGTT....................................................... 23 2 1 1.00 1 1 0 0 0
..................................................................................................ATCACTGCCATTTTGATGAGTT....................................................... 22 1 1 1.00 1 1 0 0 0
.................................................................................................TATCACAGGCATTTTGATGAGT........................................................ 22 1 1 1.00 1 0 1 0 0
.................................................................................................TATCACAGCCATTTTGATT........................................................... 19 1 1 1.00 1 0 0 1 0
.................................................................................................TACCACATCCATTTTGATGAGTT....................................................... 23 2 1 1.00 1 1 0 0 0
...................................................................................................TATCAGCCATTTTGATGAGTTT...................................................... 22 2 1 1.00 1 1 0 0 0

Anti-sense strand reads

TTGCTAACCTACGATTCGGTTGTTCACAAGCACTAGGTTCGGTATCAAGAATGCATTGAGGAGTTTCCCAACACTTTACAGCTGATAATAGATGAGTATAGTGTCGGTAAAACTACTCAAAGCACGCTTAGACCAGTCGCCTAGCTTTTTGTATAAAGTATTGGCTGACTTGGCG

****************************************.((((((.((((.(((((.((((((((((((((.(((................))).)))))))).)))))).))))).)))).))).)))..****************************************** 		Read size # Mismatch Hit Count Total Norm Total V114

embryo

 V115

head

 M054

female body

 V113

male body
.........................................................GAGGAGTTTCCCGACACTAT.................................................................................................. 20 2 2 8.00 16 8 7 1 0
......................................................ATCGAGTAGTTTCCCGACACT.................................................................................................... 21 3 3 6.00 18 12 5 0 1
........................................................CGAGGAGTTTCCCGACACTAT.................................................................................................. 21 3 2 4.50 9 4 3 2 0
..........................................................AGGAGTTTCCCGACACTAT.................................................................................................. 19 2 2 1.50 3 0 0 3 0
.......................................................TTGAGCAGTTTCCCGACACTAT.................................................................................................. 22 3 2 1.50 3 2 0 1 0
.......................................................TCGAGTAGTTTCCCGACACT.................................................................................................... 20 3 11 0.64 7 5 1 1 0
.........................................................GAGGAGTTTCCCGACACTA................................................................................................... 19 2 2 0.50 1 0 0 1 0
........................................................TGAGCAGTTTACCAACACTAT.................................................................................................. 21 3 7 0.29 2 1 1 0 0
............................................................................................................................................................GGTATTGGCTGATCTGGCG 19 3 5 0.20 1 0 0 0 1
.........................................................GAGTAGTTTCCCGACACT.................................................................................................... 18 2 6 0.17 1 0 1 0 0
.........................................................GAGGAGTTCCCCGACACTAT.................................................................................................. 20 3 7 0.14 1 0 0 1 0
........................................................CGAGGAGTTTCCCGACACTA................................................................................................... 20 3 8 0.13 1 0 0 1 0
............................................................................................................................................................AGTATTGGCTGATCTGGTG 19 3 13 0.08 1 0 0 0 1
...................................................................................................................................ACCACTCGCCTTGCTCTTTG........................ 20 3 13 0.08 1 0 0 1 0
.......................................................TCGAGTAGTTTCCCGACAC..................................................................................................... 19 3 20 0.05 1 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droSec2 scaffold_0:10705018-10705192 + dse-mir-13a Known_mirbase AACGATTGG------------------ATGCTAAGCCAACAAGTGTTCGT---G-ATC-----CAAGC---------------------------CAT-AGTTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTCGACTATT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TCTGGT-CAGCG---------GA----------------------------------------TCG--A---AAAA-------------------CA----------------------------TATTTCATAACCGAC----TGAACCGC
droSim2 3r:9985569-9985745 + dsi-mir-13a Known_mirbase AACGATTGG--AT--------------ATGCTAAACCAACAAGTGTTCGT---G-ATC-----CAAGC---------------------------CAT-AGTTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTCGACTATT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TCTCGG-CAGCG---------GA----------------------------------------TCG--A---AAAA-------------------CA----------------------------TATTTCATAACCGAC----TGAACCGC
dm3 chr3R:11243210-11243388 - dme-mir-13a Known_mirbase AACGATTGG------------------ATGCTAAACCAACAAGTGTTTGT---G-ATC-----CAAGC---------------------------CAT-AATTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTCGACTATT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TCGCGG-CAGCG---------GA----------------------------------------TCA--A---AAAA-------------------CA----------------------------TATTTCATAACCGACTGACTGAACCAC
droEre2 scaffold_4770:10769353-10769528 - der-mir-13a Known_mirbase AACGATTGG------------------ATGCTAAGCCAACAAGTGTTCGT---G-ATC-----CAAGA---------------------------CAC-AATTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTCGACTATT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TTTAAA-AAGCG---------GG----------------------------------------TTA--A--GAAAA-------------------CA----------------------------TATTTCAAAAGCGAT----TGAACAAC
droYak3 3R:15188542-15188724 + dya-mir-13a Known_mirbase AACGATTGG------------------ATGCTAAGCCAACAAGTGTTCGT---G-ATC-----CAAGC---------------------------CAT-AATTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTCGCCTATT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TCTCGG-CAACT---------TATTT-------------CAT---------------------GTA--TT-TCAAA-------------------CA----------------------------TATTTCATAATCGAT----TGACCCAC
droEug1 scf7180000409281:109499-109675 + AACGATTGA------------------GAGCTAAGCCAACAAGTGTTCGT---G-ATC-----CGATA---------------------------TAT-AATTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTTGCCTATT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAG--TTTCGG-CATCT---------GG----------------------------------------TCA--AA-GTTAT-------------------TA----------------------------TATTTCATAACCGAT----TTATTCGC
droBia1 scf7180000302136:835507-835681 - AACGGGGGC------------------GAGCTAAACCAACAAGTGTTCGT---G-ATC-----CAACA---------------------------TAT-AATTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTTGCCCACT--G-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TTTCGG-CAGCC---------GG----------------------------------------TCA--A---AAAT-------------------CG----------------------------CATTTCGCAACCGTT----CGACTCGC
droTak1 scf7180000415769:1925938-1926114 + AACGGTGGA------------------GAGCTAAACCAACAAGTGTTCGT---G-ATC-----CAACA---------------------------TAT-AATTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTTGTCTATT--A-TCCACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TTTCGG-CAGCT---------GG----------------------------------------GCA--CT-AAAAT-------------------CA----------------------------TATTTCGTGACCGTT----CGTATCGC
droEle1 scf7180000491080:1007081-1007259 - AACGAGA-----TA--------A----AAGCTCAACCAACAAGTGTTCGT---G-ATC-----CGACA---------------------------TAT-AATTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTTCCC-ACT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TTTCAG-CAACT---------GG----------------------------------------ATAGACA-TAAAT-------------------CA----------------------------GTTTTTATAAGCGCT----TGCTTCGC
droRho1 scf7180000779250:92622-92803 + AATG---GG--ATA--------A----AAGCTAAGCCAACAAGTGTTCGT---G-ATA-----TAT-ATGTCGGA--------------------TAT-AATTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTTGCCTATT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TTTCGG-CAGCT---------GG----------------------------------------GCT--A---AAAT-------------------CA----------------------------AGTTTCATAAGCGAT----TGCATCCC
droFic1 scf7180000452523:592224-592401 - GGCGAAAGC---CA--------A----AAGCTAAACCAACAAGTGTTCGT---G-ATC-----CCATA---------------------------TAT-AATTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTTGTCTGTT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TTTCGG-CAGCT---------GG----------------------------------------GCA--A---ATAT-------------------CA----------------------------ATTTCCATAACCGAT----TGTATCCC
droKik1 scf7180000302639:1443181-1443339 + -------------------------------TAAGCCAACAAGTGTTTGT---G-ATC-----CAAGAT-------------------------GTCT-GATTCTTACGTAACTCTTCAAAG-GGCTGTGAAATGTTACC-GTT--A-TCTATCCATATCACAGCCATTTTGATGAGTTCCGTGTGAA--TTTCGG-CAGCC---------AG-------------------------------------------------AAGG-------------------AG--TA----C-------------------CGCTTCGCAA---AT----CAAATCGC
droAna3 scaffold_13340:12827565-12827768 - dan-mir-13a Known_mirbase AAGGATA--------------------ATGCTACGCCAACAAGTGTGCTACAAGAATCCCCTCA----------------AAAAAGGACGATCCATCG-AGTTCTTACGTAACTCCTCAAAG-GGCTGTGAAATGTTGCC-ATT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGGGAA--TCG--T-CAG------AA-AAC-CGT-------------CA--GAAAG----------------------GGGCGCGGCGGCA-------------G----------------------------GATGTCATAACCGAT----TGTGT-TC
droBip1 scf7180000396691:1710462-1710657 - AAGGATA--------------------AAGCTGCGCCAACAAGTGTTCTC---GAAGCCCCCCTA-----------------ACCCGAAGATCCATCC-AGTTCTTACGTAACTCTTCAAGG-GGCTGTGAAATGTTGC--ATT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TTCCAA-A---------AAATCGCAT-------------CGTGGGGCG----------------------CGGCAGG-------------------C----------------------------GATTTCGTAACCGAT----TGTTCCG-
dp5 2:9824880-9825078 + dps-mir-13a Known_mirbase -----------------------------------CCAACAAGTGTTCGG---C-TCG-----TAC-TTTTTGGACAAAAAAAAAAAACCGTCAGCCC-CATACTTACGTAACCCATCAAAC-GGTTGTGAAATGTTGCA-TTT--A-TCAAATCATATCACAGCCATTTTGATGAGTTTCGTGTGGA--ATG-GC-CAG------CA-ATC-CAT-------------CATCGATCG----------------------GGGCAGG---GCAGGATGG--------AGCA----------------------------------CAGAGTGGACGGAAAGC
droPer2 scaffold_0:10660017-10660193 - dpe-mir-13a Known_mirbase ACTATTTGG------------------A-------CAAAAAAAAAACCGT---C-ATC-----C---------------------------------C-CATACTTACGTAACCCATCAAAC-GGTTGTGAAATGTTGCA-TTT--A-TCAAATCATATCACAGCCATTTTGATGAGTTTCGTGTGGA--ATG-GC-CAG------CA-ATC-CAT-------------CATCGATCG----------------------GGGCAGG---GCAGGATGG--------AGCA----------------------------------CAGAGTGGACGGAAAGC
droWil2 scf2_1100000004902:2143160-2143374 - dwi-mir-13a Known_mirbase AGTTATTGC--AC-TCT-G---CAAGTGAGTGGAGCCAACAAGTGTTTTTTTGGAATCCGTTCCGGCA---------AA---------AGA----TGGAATTTCTTACGTAACTCTTCAAGGGGGTTGTGAAATGTTGCC-ATTTTATTCAACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAGTATTCCTG-CAACA---------GT----ATTC------------GAAATGGATGGTATCCTTAGA-------------------------------------------------------------------ATAT----GTGAATTGACTGC
droVir3 scaffold_13047:13335584-13335780 + dvi-mir-13a Known_mirbase TACGGTGATAGATA-------------ACGTCGC----------------------TT-----CGATAC---------GT--AAAGACCAACCCACTC-AATTCTTGCGTAACTCTTCAAGG-GGTTGTGAAATGTTGCC-GTT--A-TCAAGTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TTGCTT-A---------A-ATT-CATTG-CCCTCGTCGGCA--GAATG-G-------------GCT---------------------GGCAAGGACGATTA----TCG-----------------TTT-----------T----TGCATTGC
droMoj3 scaffold_6540:10568277-10568511 + dmo-mir-13a Known_mirbase GACTACAAC------------------AAACACAACCAACAAGTGTTTGC---A-TCT-----CATTATATGGGACACTTAACGATCTCCGCCCATTC-AATTCTTGCGTAACTCTTCAAGG-GGTTGTGAAATGTAGCC-ATT--A-TCAAGTCATATCACAGCCATTTTGATGAGTTTCGTGTGAA--TTGCTTTCAG------CA-------TTGTCCC------------ATCCGTTTTGTGTCACTGGATT--A-----------------------------------------TCCACCTCAATCTCCATCTTCATTTGCATT----CGAATTGC
droGri2 scaffold_14906:4357596-4357819 - dgr-mir-13a Known_mirbase CATTATTTT--AT-TCTTGCATA----C-----ATCTGCAGACTGTGAGC---G-AAC-----CAAGC------------------------CCACCC-AATTCTTGCGTAACTCTTCAAGG-GGTTGTGAAATGTGGG-TATT--A-TCAAGTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TTGCTT-TCATCACAGTG-AT--CATTGTCCC-------------TCG----------------------C--CGGG---GCCGGTTCG--------TGCAGTCGCCGCCTCCTCCTGTTCCTCCTCCTT---------C----TCCTTTGT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSec2
AACGATTGG------------------ATGCTAAGCCAACAAGTGTTCGT---G-ATC-----CAAGC---------------------------CAT-AGTTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTCGACTATT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TCTGGT-CAGCG---------GA----------------------------------------TCG--A---AAAA-------------------CA----------------------------TATTTCATAACCGAC----TGAACCGCSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
............................................................................................................................................................TATCACAGCCATTTTGATGAGTT...................................................................................................................................................................23146028.00460286065463350711369
............................................................................................................................................................TATCACAGCCATTTTGATGAGT....................................................................................................................................................................2216525.00652543510414434543
............................................................................................................................................................TATCACAGCCATTTTGATGAG.....................................................................................................................................................................211597.00597571448478
................................................................................................................CTCCTCAAAG-GGTTGTGAAATG...............................................................................................................................................................................................................221491.0049117637791
................................................................................................................................................................ACAGCCATTTTGATGAGTT...................................................................................................................................................................191290.002900022367
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTT..................................................................................................................................................................241165.00165488172
.............................................................................................................................................................ATCACAGCCATTTTGATGAGTT...................................................................................................................................................................22168.006858082
..............................................................................................................................................................TCACAGCCATTTTGATGAGTT...................................................................................................................................................................21158.005830523
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTA..................................................................................................................................................................24152.0052313612
............................................................................................................................................................TATCACAGCCATTTTGATG.......................................................................................................................................................................19152.005270045
................................................................................................................................................................ACAGCCATTTTGATGAGT....................................................................................................................................................................18151.005100942
............................................................................................................................................................TATCACAGCCATTTTGATGAGTC...................................................................................................................................................................23137.003711278
............................................................................................................................................................TATCACAGCCATTTTGATGAGTA...................................................................................................................................................................23135.0035101123
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTC..................................................................................................................................................................24132.0032011813
............................................................................................................................................................TATCACAGCCATTTTGATGA......................................................................................................................................................................20131.003140027
.................................................................................................................TCCTCAAAG-GGTTGTGAAATG...............................................................................................................................................................................................................21127.002710818
.............................................................................................................................................................ATCACAGCCATTTTGATGAGT....................................................................................................................................................................21127.002726001
............................................................................................................................................................TATCACAGCCATTTTGATGAGC....................................................................................................................................................................22113.00130058
............................................................................................................................................................TATCACAGCCATTTTGATGAGA....................................................................................................................................................................22112.001210110
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTAA.................................................................................................................................................................25111.00112153
.................................................................................................................................................................CAGCCATTTTGATGAGTT...................................................................................................................................................................18110.001000100
.............................................................................................................................................................ATCACAGCCATTTTGATGAG.....................................................................................................................................................................2016.0066000
...............................................................................................................................................................CACAGCCATTTTGATGAGTT...................................................................................................................................................................2015.0050050
............................................................................................................................................................TATCACAGCCATTTTGATGAGG....................................................................................................................................................................2214.0040022
................................................................................................................CTCCTCAAAG-GGTTGTGTT..................................................................................................................................................................................................................1914.0042002
................................................................................................................CTCCTCAAAG-GGTTGTGAA..................................................................................................................................................................................................................1914.0040040
....................................................................................................................TCAAAG-GGTTGTGAAATG...............................................................................................................................................................................................................1814.0041003
................................................................................................................CTCCTCAAAG-GGTTGTGA...................................................................................................................................................................................................................1814.0040013
................................................................................................................CTCCTCAAAG-GGTTGTGAAA.................................................................................................................................................................................................................2013.0031011
..............................................................................................................................................................TCACAGCCATTTTGATGAGT....................................................................................................................................................................2013.0030012
................................................................................................................CTCCTCAAAG-GGTTGTGAAAT................................................................................................................................................................................................................2113.0030030
............................................................................................................................................................TATCACAGCCATTTTGAT........................................................................................................................................................................1813.0030012
............................................................................................................................................................TATCACAGCCATTTTGAGT.......................................................................................................................................................................1952.20111046
...........................................................................................................................................................ATATCACAGCCATTTTGATGAGTT...................................................................................................................................................................2412.0020020
............................................................................................................................................................TATCACAGCCATTTTGATGAT.....................................................................................................................................................................2112.0021001
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTAAA................................................................................................................................................................2612.0020020
............................................................................................................................................................TATCACAGCCATTTTGATGT......................................................................................................................................................................2012.0020002
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTG..................................................................................................................................................................2412.0020011
.................................................................................................................TCCTCAAAG-GGTTGTGAAA.................................................................................................................................................................................................................1912.0021001
................................................................................................................CTCCTCAAAG-GGTTGTGAAATA...............................................................................................................................................................................................................2211.0010010
............................................................................................................................................................TATCACAGCCATTTTGATGAC.....................................................................................................................................................................2111.0011000
................................................................................................................................................................ACAGCCATTTTGATGAGC....................................................................................................................................................................1811.0010001
............................................................................................................................................................TATCACAGCCATTTTGATA.......................................................................................................................................................................1921.0020002
.................................................................................................................TCCTCAAAG-GGTTGTGAAAT................................................................................................................................................................................................................2011.0010001
.............................................................................................................................................................ATCACAGCCATTTTGATGAGTC...................................................................................................................................................................2211.0010001
.............................................................................................................................................................ATCACAGCCATTTTGATGAGG....................................................................................................................................................................2111.0011000
............................................................................................................................................................TATCACAGCCATTTTGATGAAA....................................................................................................................................................................2211.0011000
............................................................................................................................................................TATCACAGCCATTTTGATT.......................................................................................................................................................................1911.0011000
droSim2
AACGATTGG--AT--------------ATGCTAAACCAACAAGTGTTCGT---G-ATC-----CAAGC---------------------------CAT-AGTTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTCGACTATT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TCTCGG-CAGCG---------GA----------------------------------------TCG--A---AAAA-------------------CA----------------------------TATTTCATAACCGAC----TGAACCGCSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
............................................................................................................................................................TATCACAGCCATTTTGATGAGTT...................................................................................................................................................................2316948.006948160210460112832914118621119338485400001
............................................................................................................................................................TATCACAGCCATTTTGATGAGT....................................................................................................................................................................2211889.00188919962514339734131314131767300000
............................................................................................................................................................TATCACAGCCATTTTGATGAG.....................................................................................................................................................................2111309.001309291492162872000164300000
............................................................................................................................................................TATCACAGCCATTTTGAT........................................................................................................................................................................181646.0064610006957500000000001
............................................................................................................................................................TATCACAGCCATTTTGATG.......................................................................................................................................................................191288.002881073001316400000100000
............................................................................................................................................................TATCACAGCCATTTTGATGA......................................................................................................................................................................201240.00240260032818000111000000
................................................................................................................CTCCTCAAAG-GGTTGTGAAATG...............................................................................................................................................................................................................221169.00169100156238000109700000
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTA..................................................................................................................................................................24176.007600010061029224400000
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTAA.................................................................................................................................................................25158.00580011000729162200000
................................................................................................................................................................ACAGCCATTTTGATGAGTT...................................................................................................................................................................19147.0047602011000043300000
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTAAA................................................................................................................................................................26140.0040000000422292100000
.............................................................................................................................................................ATCACAGCCATTTTGATGAGTT...................................................................................................................................................................22137.0037200281200020200000
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTT..................................................................................................................................................................24126.00260001100000201300000
............................................................................................................................................................TATCACAGCCATTTTGA.........................................................................................................................................................................17426.0010400000012165962000000
................................................................................................................................................................ACAGCCATTTTGATGAGT....................................................................................................................................................................18124.0024700002000141000000
.............................................................................................................................................................ATCACAGCCATTTTGATGAGT....................................................................................................................................................................21121.0021200140400000100000
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTTCG................................................................................................................................................................26119.0019000001900000000000
............................................................................................................................................................TATCACAGCCATTTTGATGAGG....................................................................................................................................................................22118.0018130000000000500000
............................................................................................................................................................TATCACAGCCATTTTGATGAGC....................................................................................................................................................................22118.0018100200000006000000
................................................................................................................CTCCTCAAAG-GGTTGTGAAAT................................................................................................................................................................................................................21116.001641110700020000000
............................................................................................................................................................TATCACAGCCATTTTGATGAC.....................................................................................................................................................................21114.0014140000000000000000
..............................................................................................................................................................TCACAGCCATTTTGATGAGTT...................................................................................................................................................................21111.001100020001100700000
............................................................................................................................................................TATCACAGCCATTTTG..........................................................................................................................................................................1649.2537000000100036000000
.................................................................................................................TCCTCAAAG-GGTTGTGAAATG...............................................................................................................................................................................................................2118.00800020300000300000
................................................................................................................CTCCTCAAAG-GGTTGTGAA..................................................................................................................................................................................................................1918.00800000800000000000
...................................................................................................................................................................GCCATTTTGATGAGTT...................................................................................................................................................................1618.00800000000017000000
................................................................................................................CTCCTCAAAG-GGTTGTGA...................................................................................................................................................................................................................1817.00700000700000000000
.......................................................................................................................................TCGACTATT--A-TCTACTCA..........................................................................................................................................................................................1817.00700500200000000000
............................................................................................................................................................TATCACAGCCATTTTGATGAGTC...................................................................................................................................................................2315.00510000000000400000
................................................................................................................CTCCTCAAAG-GGTTGTGAAA.................................................................................................................................................................................................................2015.00500000500000000000
............................................................................................................................................................TATCACAGCCATTTT...........................................................................................................................................................................1554.2021000000001119000000
.............................................................................................................................................................ATCACAGCCATTTTGATG.......................................................................................................................................................................1814.00400000400000000000
............................................................................................................................................................TATCACAGCCATTTTGATGAGCAA..................................................................................................................................................................2414.00400000000004000000
............................................................................................................................................................TATCACAGCCATTTTGATGG......................................................................................................................................................................2014.00440000000000000000
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTC..................................................................................................................................................................2414.00400020000010100000
................................................................................................................CTCCTCAAAG-GGTTGTGAAATGT..............................................................................................................................................................................................................2313.00300001000010100000
.................................................................................................................TCCTCAAAG-GGTTGTGAAAT................................................................................................................................................................................................................2013.00310000100010000000
............................................................................................................................................................TATCACAGCCATTTTGATGAGA....................................................................................................................................................................2213.00320000000100000000
.................................................................................................................................................................CAGCCATTTTGATGAGTT...................................................................................................................................................................1813.00300000000100200000
.............................................................................................................................................................ATCACAGCCATTTTGATGAG.....................................................................................................................................................................2013.00300000300000000000
...............................................................................................................................................................CACAGCCATTTTGATGAGT....................................................................................................................................................................1913.00310001000000100000
.................................................................................................................TCCTCAAAG-GGTTGTGAA..................................................................................................................................................................................................................1813.00300000300000000000
...................................................................................................................................................................................TCGTGCGAA--TCTCGG-CAG..............................................................................................................................................1813.00300300000000000000
...........................................................................................................................................................ATATCACAGCCATTTTGATGAGTT...................................................................................................................................................................2412.00200000100000100000
................................................................................................................................................................ACAGCCATTTTGATGAGTTA..................................................................................................................................................................2012.00200000000101000000
...........................................................................................................................................................ATATCACAGCCATTTTGA.........................................................................................................................................................................1832.00600000600000000000
.............................................................................................................................................................ATCACAGCCATTTTGATGAGTTTCG................................................................................................................................................................2512.00200000200000000000
............................................................................................................................................................TATCACAGCCATTTTGATGAGCA...................................................................................................................................................................2312.00200000000002000000
.............................................................................................................................................................ATCACAGCCATTTTGATGAGTTT..................................................................................................................................................................2312.00200020000000000000
..............................................................................................................................................................TCACAGCCATTTTGATGAGT....................................................................................................................................................................2012.00200000000000200000
................................................................................................................................................................ACAGCCATTTTGATGAGTTAA.................................................................................................................................................................2112.00200000000002000000
................................................................................................................CTCCTCAAAG-GGTTGTGAAATGTCG............................................................................................................................................................................................................2512.00200001100000000000
...................................................................................................................................................................................TCGTGCGAA--TCTCGG-CAGCG---------...................................................................................................................................2012.00220000000000000000
...............................................................CAAGC---------------------------CAT-AGTTCTTACGTAA......................................................................................................................................................................................................................................2111.00100000000000100000
............................................................................................................................................................TATCACAGCCATTTTGATGT......................................................................................................................................................................2011.00100000000001000000
dm3
AACGATTGG------------------ATGCTAAACCAACAAGTGTTTGT---G-ATC-----CAAGC---------------------------CAT-AATTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTCGACTATT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TCGCGG-CAGCG---------GA----------------------------------------TCA--A---AAAA-------------------CA----------------------------TATTTCATAACCGACTGACTGAACCACSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
............................................................................................................................................................TATCACAGCCATTTTGATGAGTT...................................................................................................................................................................231165783.0016578300009944201181091664182401010603611605451917619748245746586311255633819740106192233306299727042181904227600000000000000000566728392216971422587164946183235822274463439755126159146205542879371792267136290424484076114561020767771101910881474048225943814701652392123400001000207332938646478823444743326123282716000005031221715493945439603303492116876362211509418925137735014260824210483919351634000164193600000462400000270402138478691679371461577639292287400970000308937882354167299532349272329803850466832023252440100264587409060473985712313960432391311053946608148821441791103391329712848396867632585305395138851089541105673243661171317191108277191428796147169253542177741607631344543652803132852271016516757514304837
............................................................................................................................................................TATCACAGCCATTTTGATGAGT....................................................................................................................................................................22149902.0049902000089301122131350109301350137130334545501920193817111420812773252256662331272016503801597000000000000000002216151635532613015367201214474318815072717948621522354431167145310923291774568715712217303241742931245908354206523020002100020241932201211312106189106800000239225124932105608591385682332542144499651412226711033701907811660007110120000014130011042714962282581112212518103511400131100177237020311115616131914472974164312948151616706208192572715209013385419158260300105157215278310180432522114411871272159821119135715066133079872532234232271901214912227482613210744524351992055231165468416641384689226268850
............................................................................................................................................................TATCACAGCCATTTTGATGAG.....................................................................................................................................................................2117096.007096000038200010100150021000090000212289299105400101001001002212105059400000000000000000274211840021012136717201224351727106820091843123301073890188036197923868444000000000020200000000000000000000060127165066207834912314214011621206110256101000000030000000000000000500021340309100000007801263713011377334925400113010112004023310862991181101422100100205391360103220114116728210711100140106251421737411740
................................................................................................................CTCCTCAAAG-GGTTGTGAAATG...............................................................................................................................................................................................................2214149.004149000000144200000000000000000366710516223050000000000200100000000000000000000000000001001761867501502207203400203141300001720417720013703034915211400000000005113878200000001000000000000076180305642828113177261192421340000019000200000000000000000000000140000000000100000000144122033100031304120008002012002000100010000000005270102949210974241285200001321021000202300120110004106226151106300
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTT..................................................................................................................................................................2412296.00229600002100100100000010100000403000000011000120100021100000118100000000000000000201446319180010015056040110014100343202331001220404290251473800000000001041810021150102000000210900617205200341465112378096300870971013000306100000200000001322732101320203200110003746128210013180425111511130121130132012229142315221818224110625975763514620135035241591590144556411232817501452122006191320
............................................................................................................................................................TATCACAGCCATTTTGATGA......................................................................................................................................................................2012048.00204800000000000000100400000100021110788643280000000000000000000004110000000000000000001006000000000114007006720640000000010001337650460181633738217839001400000100000000000000000000000000114162066223297109112168116029000101180000000000000000000000000000000001000022000000000003001004202000001100000000000000035000813000009974701000000201000000004000000000006600000011000
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTA..................................................................................................................................................................2411450.001450000000000000000000000420002000000000111110300526533410000000000000000000000000014310610000071250101054112111000130116402022911742114000000000021071123620001500000000111170640440017431480360693000003916180001048000009500000021161202123210190000320035014000055000401140010010110020025670305750716739411211112151810174202152210100241029914010100030000510131000400
................................................................................................................................................................ACAGCCATTTTGATGAGTT...................................................................................................................................................................1911363.00136300000000000000100000000000200242411102220001000004230100000000000000000000000010030000000000000001121000000000000000005506043291200100000000001116391520332320101000002061003848022004542460901100000016230100000000000000000000010721130321104000000005998031700011616051200030020210316001010363034124910361470006324541561573111021510013030101011000000001410100101000
............................................................................................................................................................TATCACAGCCATTTTGATGAGA....................................................................................................................................................................221656.006560000401232000000000000000000000000000000002010001100000000000000000000000000000032000000020015001010000100010020100001860403618031960000000000000000000000000000000110001221010004292191310312000003100000000000000000000000000000000000000000000000000031000324100000011000000000120101937114306218560000135940100027330011100000000000000000500000001100
............................................................................................................................................................TATCACAGCCATTTTGAT........................................................................................................................................................................181535.0053500000000000000000000010000002212425300000000000000000000000000000000000000000011000000000000000010001004000000000100500210000002302100210000000000000000000000000000000006046052124247943120000022000000000000000000000000000000000000000000000001000100000000000000000000001000000000000110000025010000000000000000000000000000000000000000001
............................................................................................................................................................TATCACAGCCATTTTGATG.......................................................................................................................................................................191479.004790000000000000020060000000001971317021000000000000000000000110000000000000000000000000900000024009010102800000000001000110100020612200320000000000000000000000000000000082002111187151041721010006000000000000000000000000000000000000000000000000101500003801110000900000000000000001000000000007573100100200000000000000000000000008110000000000
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTAA.................................................................................................................................................................251450.004500000000000000000000000000000000000221100030300023001000000000000000000000000000009000400000100400000012000100002100202000000001022000000000001512033130100000000000000111206002407160700000031300000000100000190000000000000310032013000100000100000001100000101000000000000000263810272826258101000225112200456440100005215100000000000004110000000
............................................................................................................................................................TATCACAGCCATTTTGATGAGTC...................................................................................................................................................................231431.00431000000000420001000000000000000000000000000000000000000000000000000000000000000001102500030000010000111800000000100010200202140202000000000000001000010000100000000000017707007717060132000002800000000000000000000000000000000000000000010000340230000250200000200010000001000032201032141801201915143565911005111001101000010000000000110010101100
............................................................................................................................................................TATCACAGCCATTTTGATGAGC....................................................................................................................................................................221345.0034500000000000000200000001000100000000000000110000010010000000000000000000000000000200300000004002000000130000000000000024010217030200000000000000000110000000000000000001112010003803060300000030000000010000000000000000200000010001100000000001101840013801110012110010102054100511110376821309101013130310023430411101100101000000000100100201400
............................................................................................................................................................TATCACAGCCATTTTGATGAGTG...................................................................................................................................................................231337.0033700002000111020000000000000000000000000100000000020000000000000000000000000000110000000001000000001000200100000101010010000100202100000000000000000000000200000010000036050001304045045400000101000000000000000000000000001000000000000000000002000000013000000000001000000000101368316141452021413181931100022320130300000000000000000100000002000
............................................................................................................................................................TATCACAGCCATTTTGATGAGG....................................................................................................................................................................221302.003020000100000010000000000000000000000000000000000003010000000000000000000000000000000001000000101001000150102000000000000000001000210000000000000000120100000000000010004504000903035133100000160000000000000000000000000000000000000000000000000011000046040110110011010000010001044327592010118172641100020102113300000000000000000000000001100
................................................................................................................................................................ACAGCCATTTTGATGAGT....................................................................................................................................................................181301.0030100000000000000000000000000100000000020000000011100010000000000000000000000000000000000000000000000000000000000000000210300280102000000000001220000000000000000000011091309000200130003000000411000000000000000000000020010000001000000000000030115100115283510010800010100513201062921009231000895190400000010000100000100000000000200000000001
............................................................................................................................................................TATCACAGCCATTTTGATGAGTA...................................................................................................................................................................231231.002310000400243030000000000100000000000000000000000000010000000000000000000000000000000000000410000000000030000000010000031030323010410000000000000100000000000000000000001016030071117190130000001700000000010000000000000000000000000000010001000100010000480101000000000000000000003000242001007101051001013000200000312100100000000500000003000
.................................................................................................................TCCTCAAAG-GGTTGTGAAATG...............................................................................................................................................................................................................211217.0021700001000000000000000000000030140030000000000000000000000000000000000000000000000200020000002022010001200000000001001010101120000000000000000120000000000000000000000007043310140578150000070000000000000000000000000000000000000000000000023001000030000000040000010000000000000000001000813718133030000003038000001000000000011700200000000
..............................................................................................................................................................TCACAGCCATTTTGATGAGTT...................................................................................................................................................................211192.00192000000000000000000000000000010000000000000000000000000000000000000000000000000001202112100001102200222745000020004350100002010613013000000000000000000000000000000000010220200230410000000004000000000000000000000000000000000000000000000003600100001400000000000000000000000331000000000011150500000000000000000000100000000100000000000
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTAAA................................................................................................................................................................261192.0019200000000000000000000010000000000000103000000010010000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000150000201000200000000000001000001000000000000001010000003000001400000000000001020010700000000000000000000000000000000000000000018239152228910000000012000014201000000218000000000000000010000000
................................................................................................................CTCCTCAAAG-GGTTGTGAAAT................................................................................................................................................................................................................211163.0016300000000020000000000000000000134001000000000000000000000100000000000000000001120155532000001017000022500000000131000000000000011000000000000040000000000000000000000061602204413072650000020000000000000000000000000000000000000000000000012000000000000000000000100000000000000000000000121317510000000000000000000000000010100100000000
.............................................................................................................................................................ATCACAGCCATTTTGATGAGTT...................................................................................................................................................................221142.001420000100000010000010000000000000000000000000000000000100001000000000000000000012010036000000000100100080000000012000000000000000000000000000000000000000000000000000006100100504000200000010010000000000000000000000000000000000000000000022001000020000100000000000000001001272907190000012232300002101111002000000000000000000000003000
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTC..................................................................................................................................................................241138.001380000000000010000000000000010000000000000001000000000000000000000000000000000000001010000000000100000050001000000100000010005010430000000000101000000000000000000000001301001603020200001040000000000000000000000000003000000001000000420013001000037100000040000002010000100203010100100343155110000000011100001200000000000500000000000
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTATC................................................................................................................................................................26198.009800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006632000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................TATCACAGCCATTTTGA.........................................................................................................................................................................17493.7537500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050300000000000000010000000000000000000000000000010000000000000000000000000000000000000000000010110274004538000071161715300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................TATCACAGCCATTTTGATGAA.....................................................................................................................................................................21179.00790000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000010000000000000001000000001005000000000000000000000000000000000000770400280105050000005000000000000000000000000000000000000000000000000000000001301000000000000000000000020000000000020310000020000000000000000000000000100000000000
...............................................................................................................................................................CACAGCCATTTTGATGAGTT...................................................................................................................................................................20177.0077000000000000000000000000000000470100000010000000000000000000000000000000000000000000000000000000026200000000000110000000000000021000000000000000000000000000000000000240100090401000000001000000000000000000000000000000000000000000000002100000000000000001000000000000000230202010100003061110000000000000000000000000000000000000000
.................................................................................................................................................................CAGCCATTTTGATGAGTT...................................................................................................................................................................18175.0075000000000000000000000000000010420000000000000000000000000000000000000000000001000000000000000000000000000000000000000001000000200000000000001000000100000000000000000350400120410020000000000000000000000000000000000000000000000000000003300000000000000000000000000000000451202010010010144700000000000100000000000000000000000000000
droEre2
AACGATTGG------------------ATGCTAAGCCAACAAGTGTTCGT---G-ATC-----CAAGA---------------------------CAC-AATTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTCGACTATT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TTTAAA-AAGCG---------GG----------------------------------------TTA--A--GAAAA-------------------CA----------------------------TATTTCAAAAGCGAT----TGAACAACSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
............................................................................................................................................................TATCACAGCCATTTTGATGAGTT...................................................................................................................................................................23143373.0043373224714749423340366811738839
............................................................................................................................................................TATCACAGCCATTTTGATGAGT....................................................................................................................................................................22114339.001433913171875135055514290991
............................................................................................................................................................TATCACAGCCATTTTGATGAG.....................................................................................................................................................................2111143.00114312846721988700
............................................................................................................................................................TATCACAGCCATTTTGATGAGTC...................................................................................................................................................................231778.0077855728201910
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTT..................................................................................................................................................................241394.0039426177479131220
.............................................................................................................................................................ATCACAGCCATTTTGATGAGTT...................................................................................................................................................................221273.0027316492410120
............................................................................................................................................................TATCACAGCCATTTTGATGAGC....................................................................................................................................................................221235.002350210600190
................................................................................................................CTCCTCAAAG-GGTTGTGAAATG...............................................................................................................................................................................................................221189.0018915976912770
............................................................................................................................................................TATCACAGCCATTTTGATGAGTA...................................................................................................................................................................231164.00164012011600
................................................................................................................................................................ACAGCCATTTTGATGAGTT...................................................................................................................................................................191148.001481247443510
.............................................................................................................................................................ATCACAGCCATTTTGATGAGT....................................................................................................................................................................211101.00101861200030
............................................................................................................................................................TATCACAGCCATTTTGATGAGTG...................................................................................................................................................................23195.0095213020780
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTC..................................................................................................................................................................24193.0093541652340
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTA..................................................................................................................................................................24185.008514231305300
............................................................................................................................................................TATCACAGCCATTTTGATG.......................................................................................................................................................................19154.005465000421
............................................................................................................................................................TATCACAGCCATTTTGATGA......................................................................................................................................................................20152.0052153500290
................................................................................................................................................................ACAGCCATTTTGATGAGT....................................................................................................................................................................18149.0049101070310
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTG..................................................................................................................................................................24146.004671400340
..............................................................................................................................................................TCACAGCCATTTTGATGAGTT...................................................................................................................................................................21145.0045517230180
............................................................................................................................................................TATCACAGCCATTTTGATGAGA....................................................................................................................................................................22129.002931301210
...............................................................................................................................................................CACAGCCATTTTGATGAGTT...................................................................................................................................................................20126.002619210130
...............................................................................................................................................................CACAGCCATTTTGATGAGT....................................................................................................................................................................19112.001210010100
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTAA.................................................................................................................................................................25111.00110040070
.............................................................................................................................................................ATCACAGCCATTTTGATGAG.....................................................................................................................................................................20111.001110010000
............................................................................................................................................................TATCACAGCCATTTTGAT........................................................................................................................................................................18110.00100001090
.................................................................................................................................................................CAGCCATTTTGATGAGTT...................................................................................................................................................................18110.00100013060
..............................................................................................................................................................TCACAGCCATTTTGATGAGT....................................................................................................................................................................2018.0081100060
................................................................................................................CTCCTCAAAG-GGTTGTGAAATT...............................................................................................................................................................................................................2216.0060004020
............................................................................................................................................................TATCACAGCCATTTTGATGAGCC...................................................................................................................................................................2315.0050400010
................................................................................................................CTCCTCAAAG-GGTTGTGAAA.................................................................................................................................................................................................................2015.0050010040
............................................................................................................................................................TATCACAGCCATTTTGATGAGG....................................................................................................................................................................2215.0050011120
.............................................................................................................................................................ATCACAGCCATTTTGATGAGTTT..................................................................................................................................................................2314.0041100020
.................................................................................................................TCCTCAAAG-GGTTGTGAAATG...............................................................................................................................................................................................................2114.0041001020
.............................................................................................................................................................ATCACAGCCATTTTGATGAGTC...................................................................................................................................................................2214.0040400000
...............................................................................................................................................................CACAGCCATTTTGATGAG.....................................................................................................................................................................1814.0040000040
............................................................................................................................................................TATCACAGCCATTTTGATGAA.....................................................................................................................................................................2113.0030100020
...........................................................................................................................................................ATATCACAGCCATTTTGATGAGTT...................................................................................................................................................................2413.0031101000
............................................................................................................................................................TATCACAGCCATTTTGATGAT.....................................................................................................................................................................2113.0030001020
................................................................................................................CTCCTCAAAG-GGTTGTGAAAT................................................................................................................................................................................................................2113.0030011010
............................................................................................................................................................TATCACAGCCATTTTGAGT.......................................................................................................................................................................1972.001410002110
droYak3
AACGATTGG------------------ATGCTAAGCCAACAAGTGTTCGT---G-ATC-----CAAGC---------------------------CAT-AATTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTCGCCTATT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TCTCGG-CAACT---------TATTT-------------CAT---------------------GTA--TT-TCAAA-------------------CA----------------------------TATTTCATAATCGAT----TGACCCACSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
............................................................................................................................................................TATCACAGCCATTTTGATGAGTT...................................................................................................................................................................23135057.0035057441354185946623219959093340000
............................................................................................................................................................TATCACAGCCATTTTGATGAGT....................................................................................................................................................................2214356.0043563943711765416081477771000
............................................................................................................................................................TATCACAGCCATTTTGATGAGTC...................................................................................................................................................................2311380.001380011361351000000
................................................................................................................CTCCTCAAAG-GGTTGTGAAATG...............................................................................................................................................................................................................2211187.001187069602114420000
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTT..................................................................................................................................................................241331.003310151303537104100000
.............................................................................................................................................................ATCACAGCCATTTTGATGAGTT...................................................................................................................................................................221274.00274011915311000000
............................................................................................................................................................TATCACAGCCATTTTGATGAG.....................................................................................................................................................................211256.0025670343018307040000
............................................................................................................................................................TATCACAGCCATTTTGATGAGC....................................................................................................................................................................221215.002152020331600000
................................................................................................................................................................ACAGCCATTTTGATGAGTT...................................................................................................................................................................191157.0015720358325930000
................................................................................................................CTCCTCAAAG-GGTTGTGAAAT................................................................................................................................................................................................................21141.0041203621000000
................................................................................................................................................................ACAGCCATTTTGATGAGT....................................................................................................................................................................18141.004110011101900000
.............................................................................................................................................................ATCACAGCCATTTTGATGAGT....................................................................................................................................................................21137.0037032500000000
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTA..................................................................................................................................................................24135.00350015631010000
...............................................................................................................................................................CACAGCCATTTTGATGAGTT...................................................................................................................................................................20132.0032012820100000
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTC..................................................................................................................................................................24131.0031001651810000
..............................................................................................................................................................TCACAGCCATTTTGATGAGTT...................................................................................................................................................................21130.0030041461500000
............................................................................................................................................................TATCACAGCCATTTTGATGAGTG...................................................................................................................................................................23127.0027002212200000
............................................................................................................................................................TATCACAGCCATTTTGATG.......................................................................................................................................................................19126.0026146301200000
................................................................................................................CTCCTCAAAG-GGTTGTGAAA.................................................................................................................................................................................................................20116.0016011100400000
............................................................................................................................................................TATCACAGCCATTTTGATGAGTA...................................................................................................................................................................23113.0013001010200000
.............................................................................................................................................................ATCACAGCCATTTTGATGAGTC...................................................................................................................................................................22113.0013001300000000
............................................................................................................................................................TATCACAGCCATTTTGATGA......................................................................................................................................................................20110.001044101000000
.................................................................................................................................................................CAGCCATTTTGATGAGTT...................................................................................................................................................................1819.00900620100000
............................................................................................................................................................TATCACAGCCATTTTGATGAGCC...................................................................................................................................................................2318.00800800000000
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTG..................................................................................................................................................................2418.00801302200000
............................................................................................................................................................TATCACAGCCATTTTGATGAGG....................................................................................................................................................................2218.00830011300000
.................................................................................................................TCCTCAAAG-GGTTGTGAAATG...............................................................................................................................................................................................................2117.00702220100000
..............................................................................................................................................................TCACAGCCATTTTGATGAGT....................................................................................................................................................................2017.00702203000000
................................................................................................................CTCCTCAAAG-GGTTGTGAAATGT..............................................................................................................................................................................................................2316.00600600000000
............................................................................................................................................................TATCACAGCCATTTTGATGAC.....................................................................................................................................................................2116.00640200000000
............................................................................................................................................................TATCACAGCCATTTTGATGAGA....................................................................................................................................................................2214.00400110200000
...............................................................................................................................................................CACAGCCATTTTGATGAGTC...................................................................................................................................................................2014.00400400000000
............................................................................................................................................................TATCACAGCCATTTTGATGAA.....................................................................................................................................................................2114.00420001100000
.......................................................................................................................................TCGCCTATT--A-TCTACTCA..........................................................................................................................................................................................1813.00310200000000
...................................................................................................................................................................................TCGTGCGAA--TCTCGG-CAACT---------...................................................................................................................................2013.00330000000000
.............................................................................................................................................................ATCACAGCCATTTTGATGAGTTT..................................................................................................................................................................2313.00302100000000
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTTT.................................................................................................................................................................2513.00301100100000
................................................................................................................CTCCTCAAAG-GGTTGTGAA..................................................................................................................................................................................................................1912.00200100100000
................................................................................................................CTCCTCAAAG-GGTTGTGAAATGA..............................................................................................................................................................................................................2312.00200200000000
droEug1
AACGATTGA------------------GAGCTAAGCCAACAAGTGTTCGT---G-ATC-----CGATA---------------------------TAT-AATTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTTGCCTATT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAG--TTTCGG-CATCT---------GG----------------------------------------TCA--AA-GTTAT-------------------TA----------------------------TATTTCATAACCGAT----TTATTCGCSizeHit CountTotal NormTotal
No Reads
droBia1
AACGGGGGC------------------GAGCTAAACCAACAAGTGTTCGT---G-ATC-----CAACA---------------------------TAT-AATTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTTGCCCACT--G-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TTTCGG-CAGCC---------GG----------------------------------------TCA--A---AAAT-------------------CG----------------------------CATTTCGCAACCGTT----CGACTCGCSizeHit CountTotal NormTotal
No Reads
droTak1
AACGGTGGA------------------GAGCTAAACCAACAAGTGTTCGT---G-ATC-----CAACA---------------------------TAT-AATTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTTGTCTATT--A-TCCACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TTTCGG-CAGCT---------GG----------------------------------------GCA--CT-AAAAT-------------------CA----------------------------TATTTCGTGACCGTT----CGTATCGCSizeHit CountTotal NormTotal
No Reads
droEle1
AACGAGA-----TA--------A----AAGCTCAACCAACAAGTGTTCGT---G-ATC-----CGACA---------------------------TAT-AATTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTTCCC-ACT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TTTCAG-CAACT---------GG----------------------------------------ATAGACA-TAAAT-------------------CA----------------------------GTTTTTATAAGCGCT----TGCTTCGCSizeHit CountTotal NormTotal
No Reads
droRho1
AATG---GG--ATA--------A----AAGCTAAGCCAACAAGTGTTCGT---G-ATA-----TAT-ATGTCGGA--------------------TAT-AATTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTTGCCTATT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TTTCGG-CAGCT---------GG----------------------------------------GCT--A---AAAT-------------------CA----------------------------AGTTTCATAAGCGAT----TGCATCCCSizeHit CountTotal NormTotal
No Reads
droFic1
GGCGAAAGC---CA--------A----AAGCTAAACCAACAAGTGTTCGT---G-ATC-----CCATA---------------------------TAT-AATTCTTACGTAACTCCTCAAAG-GGTTGTGAAATGTTGTCTGTT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TTTCGG-CAGCT---------GG----------------------------------------GCA--A---ATAT-------------------CA----------------------------ATTTCCATAACCGAT----TGTATCCCSizeHit CountTotal NormTotal
No Reads
droKik1
-------------------------------TAAGCCAACAAGTGTTTGT---G-ATC-----CAAGAT-------------------------GTCT-GATTCTTACGTAACTCTTCAAAG-GGCTGTGAAATGTTACC-GTT--A-TCTATCCATATCACAGCCATTTTGATGAGTTCCGTGTGAA--TTTCGG-CAGCC---------AG-------------------------------------------------AAGG-------------------AG--TA----C-------------------CGCTTCGCAA---AT----CAAATCGCSizeHit CountTotal NormTotal
No Reads
droAna3
AAGGATA--------------------ATGCTACGCCAACAAGTGTGCTACAAGAATCCCCTCA----------------AAAAAGGACGATCCATCG-AGTTCTTACGTAACTCCTCAAAG-GGCTGTGAAATGTTGCC-ATT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGGGAA--TCG--T-CAG------AA-AAC-CGT-------------CA--GAAAG----------------------GGGCGCGGCGGCA-------------G----------------------------GATGTCATAACCGAT----TGTGT-TCSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
............................................................................................................................................................TATCACAGCCATTTTGATGAGTT...................................................................................................................................................................23122015.0022015284667547844153759788
............................................................................................................................................................TATCACAGCCATTTTGATGAGT....................................................................................................................................................................2217585.0075851605589312511045419
............................................................................................................................................................TATCACAGCCATTTTGATGAG.....................................................................................................................................................................211713.0071320152749593
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTT..................................................................................................................................................................241490.00490790716130195
............................................................................................................................................................TATCACAGCCATTTTGATGAGTC...................................................................................................................................................................231461.0046104510613
............................................................................................................................................................TATCACAGCCATTTTGATGAGC....................................................................................................................................................................221134.00134011409011
.............................................................................................................................................................ATCACAGCCATTTTGATGAGTT...................................................................................................................................................................22198.009833570017
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTA..................................................................................................................................................................24162.0062225213416
................................................................................................................................................................ACAGCCATTTTGATGAGTT...................................................................................................................................................................19157.00570824007
............................................................................................................................................................TATCACAGCCATTTTGATGA......................................................................................................................................................................20152.005251504127
................................................................................................................CTCCTCAAAG-GGCTGTGAAATG...............................................................................................................................................................................................................22150.005081032117
............................................................................................................................................................TATCACAGCCATTTTGATG.......................................................................................................................................................................19143.00432504032
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTG..................................................................................................................................................................24128.00280007021
..............................................................................................................................................................TCACAGCCATTTTGATGAGTT...................................................................................................................................................................21128.00282151217
................................................................................................................................................................ACAGCCATTTTGATGAGT....................................................................................................................................................................18123.00230011516
.............................................................................................................................................................ATCACAGCCATTTTGATGAGT....................................................................................................................................................................21121.00211070004
...............................................................................................................................................................CACAGCCATTTTGATGAGTT...................................................................................................................................................................20119.00190120106
............................................................................................................................................................TATCACAGCCATTTTGATGAGTG...................................................................................................................................................................23118.0018071307
............................................................................................................................................................TATCACAGCCATTTTGATGAT.....................................................................................................................................................................21117.00170000017
............................................................................................................................................................TATCACAGCCATTTTGATGAGTA...................................................................................................................................................................23115.0015111309
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTAA.................................................................................................................................................................25113.0013190003
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTC..................................................................................................................................................................24111.0011120305
............................................................................................................................................................TATCACAGCCATTTTGATGAGA....................................................................................................................................................................22110.0010001108
..............................................................................................................................................................TCACAGCCATTTTGATGAGT....................................................................................................................................................................2019.009020007
............................................................................................................................................................TATCACAGCCATTTTGATGAGG....................................................................................................................................................................2217.007000205
.................................................................................................................TCCTCAAAG-GGCTGTGAAATG...............................................................................................................................................................................................................2116.006300300
................................................................................................................CTCCTCAAAG-GGCTGTGA...................................................................................................................................................................................................................1816.006100401
................................................................................................................CTCCTCAAAG-GGCTGTGAA..................................................................................................................................................................................................................1916.006001410
...............................................................................................................................................................CACAGCCATTTTGATGAGT....................................................................................................................................................................1916.006010104
............................................................................................................................................................TATCACAGCCATTTTGATGT......................................................................................................................................................................2016.006000105
................................................................................................................CTCCTCAAAG-GGCTGTGAAAT................................................................................................................................................................................................................2115.005131000
............................................................................................................................................................TATCACAGCCATTTTGATGAA.....................................................................................................................................................................2115.005100004
............................................................................................................................................................TATCACAGCCATTTTGAT........................................................................................................................................................................1814.004110002
.................................................................................................................................................................CAGCCATTTTGATGAGTT...................................................................................................................................................................1814.004040000
................................................................................................................CTCCTCAAAG-GGCTGTGAAA.................................................................................................................................................................................................................2014.004010201
.............................................................................................................................................................ATCACAGCCATTTTGATGAGTTT..................................................................................................................................................................2314.004110002
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTTT.................................................................................................................................................................2514.004000211
............................................................................................................................................................TATCACAGCCATTTTGAGT.......................................................................................................................................................................1943.00120000012
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTAAA................................................................................................................................................................2613.003030000
............................................................................................................................................................TATCACAGCCATTTTGATGAGCC...................................................................................................................................................................2313.003030000
...........................................................................................................................................................ATATCACAGCCATTTTGATGAGTT...................................................................................................................................................................2413.003030000
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTTG.................................................................................................................................................................2533.009000207
............................................................................................................................................................TATCACAGCCATTTTGATGAGAC...................................................................................................................................................................2313.003030000
............................................................................................................................................................TATCACAGCCATTTTGATGAC.....................................................................................................................................................................2113.003020001
............................................................................................................................................................TATCACAGCCATTTTGATGAGCA...................................................................................................................................................................2313.003010002
............................................................................................................................................................TATCACAGCCATTTTGATGATC....................................................................................................................................................................2212.002000200
..............................................................................................................................................................TCACAGCCATTTTGATGAGTC...................................................................................................................................................................2112.002020000
droBip1
AAGGATA--------------------AAGCTGCGCCAACAAGTGTTCTC---GAAGCCCCCCTA-----------------ACCCGAAGATCCATCC-AGTTCTTACGTAACTCTTCAAGG-GGCTGTGAAATGTTGC--ATT--A-TCTACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TTCCAA-A---------AAATCGCAT-------------CGTGGGGCG----------------------CGGCAGG-------------------C----------------------------GATTTCGTAACCGAT----TGTTCCG-SizeHit CountTotal NormTotal
No Reads
dp5
-----------------------------------CCAACAAGTGTTCGG---C-TCG-----TAC-TTTTTGGACAAAAAAAAAAAACCGTCAGCCC-CATACTTACGTAACCCATCAAAC-GGTTGTGAAATGTTGCA-TTT--A-TCAAATCATATCACAGCCATTTTGATGAGTTTCGTGTGGA--ATG-GC-CAG------CA-ATC-CAT-------------CATCGATCG----------------------GGGCAGG---GCAGGATGG--------AGCA----------------------------------CAGAGTGGACGGAAAGCSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
............................................................................................................................................................TATCACAGCCATTTTGATGAGTT...................................................................................................................................................................23156311.005631101841297839000899764231911075
............................................................................................................................................................TATCACAGCCATTTTGATGAGT....................................................................................................................................................................22115200.001520007342925767412772500731016
............................................................................................................................................................TATCACAGCCATTTTGATGAGTC...................................................................................................................................................................2313063.003063022672379631000
............................................................................................................................................................TATCACAGCCATTTTGATGAGC....................................................................................................................................................................2211455.00145500479966280000
............................................................................................................................................................TATCACAGCCATTTTGATGAG.....................................................................................................................................................................2111058.00105809190549492715012
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTT..................................................................................................................................................................2411054.001054038408412391487002
.............................................................................................................................................................ATCACAGCCATTTTGATGAGTT...................................................................................................................................................................221368.00368014212795220000
................................................................................................................CCCATCAAAC-GGTTGTGAAATG...............................................................................................................................................................................................................221333.00333045493217100009
................................................................................................................................................................ACAGCCATTTTGATGAGTT...................................................................................................................................................................191187.00187017591830000
............................................................................................................................................................TATCACAGCCATTTTGATGA......................................................................................................................................................................201160.001600275119180000
.............................................................................................................................................................ATCACAGCCATTTTGATGAGT....................................................................................................................................................................211160.00160056794120000
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTC..................................................................................................................................................................241133.00133017844460000
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTA..................................................................................................................................................................241119.00119086328693002
..............................................................................................................................................................TCACAGCCATTTTGATGAGTT...................................................................................................................................................................21180.00800831201720002
............................................................................................................................................................TATCACAGCCATTTTGATG.......................................................................................................................................................................19151.0051013329240000
................................................................................................................................................................ACAGCCATTTTGATGAGT....................................................................................................................................................................18146.0046002013310000
............................................................................................................................................................TATCACAGCCATTTTGATGAGTG...................................................................................................................................................................23140.004000286510000
............................................................................................................................................................TATCACAGCCATTTTGATGAGA....................................................................................................................................................................22134.003404518070000
...............................................................................................................................................................CACAGCCATTTTGATGAGTT...................................................................................................................................................................20134.0034021114160000
............................................................................................................................................................TATCACAGCCATTTTGATGAC.....................................................................................................................................................................21125.002500718000000
............................................................................................................................................................TATCACAGCCATTTTGATGAGTA...................................................................................................................................................................23124.002400106530000
..............................................................................................................................................................TCACAGCCATTTTGATGAGT....................................................................................................................................................................20123.002303116110001
.............................................................................................................................................................ATCACAGCCATTTTGATGAGTC...................................................................................................................................................................22117.001700134000000
............................................................................................................................................................TATCACAGCCATTTTGATGAGAC...................................................................................................................................................................23116.001600142000000
................................................................................................................CCCATCAAAC-GGTTGTGAAA.................................................................................................................................................................................................................20115.00150251160000
............................................................................................................................................................TATCACAGCCATTTTGATGAGCC...................................................................................................................................................................23113.001300111010000
................................................................................................................CCCATCAAAC-GGTTGTGAAAT................................................................................................................................................................................................................21112.00120252210000
.............................................................................................................................................................ATCACAGCCATTTTGATGAGTTT..................................................................................................................................................................23110.00100307000000
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTG..................................................................................................................................................................24110.00100033130000
............................................................................................................................................................TATCACAGCCATTTTGATGAGG....................................................................................................................................................................22110.00100002620000
.................................................................................................................CCATCAAAC-GGTTGTGAAATG...............................................................................................................................................................................................................2119.0090500400000
...............................................................................................................................................................CACAGCCATTTTGATGAGT....................................................................................................................................................................1919.0090215100000
.................................................................................................................................................................CAGCCATTTTGATGAGTT...................................................................................................................................................................1819.0090140220000
............................................................................................................................................................TATCACAGCCATTTTGATGAA.....................................................................................................................................................................2119.0090108000000
.............................................................................................................................................................ATCACAGCCATTTTGATGAGC....................................................................................................................................................................2117.0070007000000
.............................................................................................................................................................ATCACAGCCATTTTGATGAG.....................................................................................................................................................................2017.0070502000000
...........................................................................................................................................................ATATCACAGCCATTTTGATGAGTT...................................................................................................................................................................2417.0070151000000
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTTT.................................................................................................................................................................2516.0060122010000
................................................................................................................CCCATCAAAC-GGTTGTGAA..................................................................................................................................................................................................................1915.0050310000001
................................................................................................................................................................ACAGCCATTTTGATGAGTTT..................................................................................................................................................................2014.0040001030000
droPer2
ACTATTTGG------------------A-------CAAAAAAAAAACCGT---C-ATC-----C---------------------------------C-CATACTTACGTAACCCATCAAAC-GGTTGTGAAATGTTGCA-TTT--A-TCAAATCATATCACAGCCATTTTGATGAGTTTCGTGTGGA--ATG-GC-CAG------CA-ATC-CAT-------------CATCGATCG----------------------GGGCAGG---GCAGGATGG--------AGCA----------------------------------CAGAGTGGACGGAAAGCSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
............................................................................................................................................................TATCACAGCCATTTTGATGAGTT...................................................................................................................................................................23114724.001472417346227965765406100
............................................................................................................................................................TATCACAGCCATTTTGATGAGT....................................................................................................................................................................2214959.00495953163632380186332
............................................................................................................................................................TATCACAGCCATTTTGATGAG.....................................................................................................................................................................211477.0047714592571623
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTT..................................................................................................................................................................241361.003610651531898
................................................................................................................................................................ACAGCCATTTTGATGAGTT...................................................................................................................................................................191147.00147001670610
................................................................................................................CCCATCAAAC-GGTTGTGAAATG...............................................................................................................................................................................................................22193.0093134488200
................................................................................................................................................................ACAGCCATTTTGATGAGT....................................................................................................................................................................18158.005800331240
.............................................................................................................................................................ATCACAGCCATTTTGATGAGTT...................................................................................................................................................................22142.00423311340
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTA..................................................................................................................................................................24140.004001512220
.............................................................................................................................................................ATCACAGCCATTTTGATGAGT....................................................................................................................................................................21132.00320290210
............................................................................................................................................................TATCACAGCCATTTTGATGAGC....................................................................................................................................................................22121.002100011100
............................................................................................................................................................TATCACAGCCATTTTGATGAGTC...................................................................................................................................................................23119.00190106120
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTC..................................................................................................................................................................24117.0017002951
................................................................................................................CCCATCAAAC-GGTTGTGAAAT................................................................................................................................................................................................................21115.00152100111
............................................................................................................................................................TATCACAGCCATTTTGATGAGG....................................................................................................................................................................22112.0012022350
............................................................................................................................................................TATCACAGCCATTTTGATGAGA....................................................................................................................................................................22112.0012011640
............................................................................................................................................................TATCACAGCCATTTTGATGAGTA...................................................................................................................................................................23110.0010000370
...............................................................................................................................................................CACAGCCATTTTGATGAGTT...................................................................................................................................................................20110.0010211510
................................................................................................................CCCATCAAAC-GGTTGTGAAA.................................................................................................................................................................................................................20110.0010111430
............................................................................................................................................................TATCACAGCCATTTTGATGA......................................................................................................................................................................2019.009012240
..............................................................................................................................................................TCACAGCCATTTTGATGAGTT...................................................................................................................................................................2117.007001420
............................................................................................................................................................TATCACAGCCATTTTGATG.......................................................................................................................................................................1916.006110130
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTTT.................................................................................................................................................................2516.006010140
.................................................................................................................................................................CAGCCATTTTGATGAGTT...................................................................................................................................................................1815.005011300
............................................................................................................................................................TATCACAGCCATTTTGATGAGTG...................................................................................................................................................................2315.005000140
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTAA.................................................................................................................................................................2515.005000320
..............................................................................................................................................................TCACAGCCATTTTGATGAGT....................................................................................................................................................................2014.004020200
................................................................................................................CCCATCAAAC-GGTTGTGA...................................................................................................................................................................................................................1814.004000040
.............................................................................................................................................................ATCACAGCCATTTTGATGAG.....................................................................................................................................................................2014.004040000
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTG..................................................................................................................................................................2413.003000120
............................................................................................................................................................TATCACAGCCATTTTGAT........................................................................................................................................................................1813.003100020
..............................................................................................................................................................TCACAGCCATTTTGATGAG.....................................................................................................................................................................1913.003000210
............................................................................................................................................................TATCACAGCCATTTTGATGAGTAA..................................................................................................................................................................2412.002000110
................................................................................................................................................................ACAGCCATTTTGATGAGTTT..................................................................................................................................................................2012.002000020
................................................................................................................................................................ACAGCCATTTTGATGAGTTA..................................................................................................................................................................2012.002001010
................................................................................................................CCCATCAAAC-GGTTGTGAAATGA..............................................................................................................................................................................................................2312.002200000
.............................................................................................................................................................ATCACAGCCATTTTGATGAGTTT..................................................................................................................................................................2312.002010010
............................................................................................................................................................TATCACAGCCATTTTGATGATC....................................................................................................................................................................2212.002000020
...................................................................................................................................................................................TCGTGTGGA--ATG-GC-CAG------C.......................................................................................................................................1812.002000020
...............................................................................................................................................................CACAGCCATTTTGATGAGT....................................................................................................................................................................1912.002002000
droWil2
AGTTATTGC--AC-TCT-G---CAAGTGAGTGGAGCCAACAAGTGTTTTTTTGGAATCCGTTCCGGCA---------AA---------AGA----TGGAATTTCTTACGTAACTCTTCAAGGGGGTTGTGAAATGTTGCC-ATTTTATTCAACTCATATCACAGCCATTTTGATGAGTTTCGTGCGAGTATTCCTG-CAACA---------GT----ATTC------------GAAATGGATGGTATCCTTAGA-------------------------------------------------------------------ATAT----GTGAATTGACTGCSizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
............................................................................................................................................................TATCACAGCCATTTTGATGAGTT...................................................................................................................................................................23154258.005425824712822583985612615
............................................................................................................................................................TATCACAGCCATTTTGATGAGT....................................................................................................................................................................22110521.00105211793935036416258
................................................................................................................CTCTTCAAGGGGGTTGTGAAATG...............................................................................................................................................................................................................2314092.00409224153299772
............................................................................................................................................................TATCACAGCCATTTTGATGAG.....................................................................................................................................................................2111119.001119234402115728
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTT..................................................................................................................................................................241289.00289010721458
.............................................................................................................................................................ATCACAGCCATTTTGATGAGTT...................................................................................................................................................................221157.00157211102816
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTA..................................................................................................................................................................241143.0014303001067
............................................................................................................................................................TATCACAGCCATTTTGATG.......................................................................................................................................................................191109.001095320153
................................................................................................................................................................ACAGCCATTTTGATGAGTT...................................................................................................................................................................191108.0010812016629
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTAA.................................................................................................................................................................251105.001050210840
..............................................................................................................................................................TCACAGCCATTTTGATGAGTT...................................................................................................................................................................21183.008301004627
............................................................................................................................................................TATCACAGCCATTTTGATGA......................................................................................................................................................................20163.0063860247
.................................................................................................................TCTTCAAGGGGGTTGTGAAATG...............................................................................................................................................................................................................22155.0055012439
............................................................................................................................................................TATCACAGCCATTTTGATGAGTC...................................................................................................................................................................23147.00470003215
................................................................................................................................................................ACAGCCATTTTGATGAGT....................................................................................................................................................................18144.00444001228
.............................................................................................................................................................ATCACAGCCATTTTGATGAGT....................................................................................................................................................................21141.0041526037
............................................................................................................................................................TATCACAGCCATTTTGATGAGC....................................................................................................................................................................22138.0038500429
.......................................................................................................................................TTGCC-ATTTTATTCAACTCA..........................................................................................................................................................................................20129.0029820163
...............................................................................................................................................................CACAGCCATTTTGATGAGTT...................................................................................................................................................................20126.0026030716
............................................................................................................................................................TATCACAGCCATTTTGATGAGG....................................................................................................................................................................22125.0025180025
................................................................................................................CTCTTCAAGGGGGTTGTGAAAT................................................................................................................................................................................................................22121.0021000210
............................................................................................................................................................TATCACAGCCATTTTGATGAGTA...................................................................................................................................................................23121.0021020811
............................................................................................................................................................TATCACAGCCATTTTGATGAGA....................................................................................................................................................................22120.0020010316
...............................................................................................................................................................CACAGCCATTTTGATGAGT....................................................................................................................................................................19120.0020010019
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTAAA................................................................................................................................................................26217.0034050290
..............................................................................................................................................................TCACAGCCATTTTGATGAGT....................................................................................................................................................................20116.0016000115
.................................................................................................................................................................CAGCCATTTTGATGAGTT...................................................................................................................................................................18114.001404037
............................................................................................................................................................TATCACAGCCATTTTGATGAC.....................................................................................................................................................................21113.0013120001
................................................................................................................CTCTTCAAGGGGGTTGTGAAA.................................................................................................................................................................................................................21112.0012000120
.................................................................................................................TCTTCAAGGGGGTTGTGAAA.................................................................................................................................................................................................................20111.001102153
..............................................................................................................................................................TCACAGCCATTTTGATGAGTTT..................................................................................................................................................................22110.001000082
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTG..................................................................................................................................................................24110.001013042
.................................................................................................................TCTTCAAGGGGGTTGTGA...................................................................................................................................................................................................................1819.00900045
.................................................................................................................TCTTCAAGGGGGTTGTGAAAT................................................................................................................................................................................................................2118.00800053
.......................................................................................................................................TTGCC-ATTTTATTCAACTC...........................................................................................................................................................................................1918.00860011
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTC..................................................................................................................................................................2427.5015000105
................................................................................................................CTCTTCAAGGGGGTTGTG....................................................................................................................................................................................................................1817.00710024
................................................................................................................CTCTTCAAGGGGGTTGTGAA..................................................................................................................................................................................................................2016.00600060
................................................................................................................CTCTTCAAGGGGGTTGTGA...................................................................................................................................................................................................................1916.00600042
............................................................................................................................................................TATCACAGCCATTTTGATAGT.....................................................................................................................................................................2185.88470011630
................................................................................................................CTCTTCAAGGGGGTTGTGAAATT...............................................................................................................................................................................................................2315.00500050
............................................................................................................................................................TATCACAGCCATTTTGATGT......................................................................................................................................................................2015.00500005
............................................................................................................................................................TATCACAGCCATTTTGATGAGTAA..................................................................................................................................................................2415.00500050
............................................................................................................................................................TATCACAGCCATTTTGATGG......................................................................................................................................................................2014.00440000
................................................................................................................CTCTTCAAGGGGGTTGTGAAATA...............................................................................................................................................................................................................2314.00400022
.............................................................................................................................................................ATCACAGCCATTTTGATGAGTTA..................................................................................................................................................................2313.00303000
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTAT.................................................................................................................................................................2513.00300030
.............................................................................................................................................................ATCACAGCCATTTTGATGAGTTT..................................................................................................................................................................2313.00303000
................................................................................................................CTCTTCAAGGGGGTTGTGAAATC...............................................................................................................................................................................................................2313.00300012
............................................................................................................................................................TATCACAGCCATTTTGATGTT.....................................................................................................................................................................2113.00301002
..............................................................................................................................................................TCACAGCCATTTTGATGAGTTA..................................................................................................................................................................2213.00300012
............................................................................................................................................................TATCACAGCCATTTTGATGAA.....................................................................................................................................................................2112.00200002
.............................................................................................................................................................ATCACAGCCATTTTGATGAG.....................................................................................................................................................................2012.00201001
................................................................................................................CTCTTCAAGGGGGTTGTGAATG................................................................................................................................................................................................................2212.00200011
............................................................................................................................................................TATCACAGCCATTTTGATGAT.....................................................................................................................................................................2112.00200011
............................................................................................................................................................TATCACAGCCATTTTGATGAGTAAA.................................................................................................................................................................2512.00200020
..............................................................................................................................................................TCACAGCCATTTTGATGAG.....................................................................................................................................................................1912.00200002
.............................................................................................................................................................ATCACAGCCATTTTGATGA......................................................................................................................................................................1912.00202000
............................................................................................................................................................TATCACAGCCATTTTGAT........................................................................................................................................................................1812.00200002
................................................................................................................CTCTTCAAGGGGGTTGTGAAATGT..............................................................................................................................................................................................................2412.00200020
droVir3
TACGGTGATAGATA-------------ACGTCGC----------------------TT-----CGATAC---------GT--AAAGACCAACCCACTC-AATTCTTGCGTAACTCTTCAAGG-GGTTGTGAAATGTTGCC-GTT--A-TCAAGTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TTGCTT-A---------A-ATT-CATTG-CCCTCGTCGGCA--GAATG-G-------------GCT---------------------GGCAAGGACGATTA----TCG-----------------TTT-----------T----TGCATTGCSizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
............................................................................................................................................................TATCACAGCCATTTTGATGAGTT...................................................................................................................................................................23130205.0030205224105143455520117283340003195610164461111108155841194012766533355737150522835311670727012612918275910106612111539294251454241758171185056443500101800310023121000
............................................................................................................................................................TATCACAGCCATTTTGATGAGT....................................................................................................................................................................22119272.0019272039944814163913194181012419161040680151713636881121390155914321653539831109385121487211232316913000000011122222200211128265376012556206004260000
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTC..................................................................................................................................................................2416046.00604600201362220790000000201310734121892151211928573371293235311102872200000200000022000041573300000000000000000
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTT..................................................................................................................................................................2413040.00304001511692392003001025713559160142986812819482153216367994221832108161080000000011231210001161371602201100000020000
............................................................................................................................................................TATCACAGCCATTTTGATGAG.....................................................................................................................................................................2111964.00196426115718160261121000113624886664388983032312171709632908002001500000000120412200139195800211200000100000
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTA..................................................................................................................................................................241840.0084000110361001000015731033458109567818113258180920414745390000000000000000000412503200000000000000
............................................................................................................................................................TATCACAGCCATTTTGATGAGTC...................................................................................................................................................................231347.00347005243000000000001011050110010162841902000004000000000000000000039300000000000000000
................................................................................................................................................................ACAGCCATTTTGATGAGTT...................................................................................................................................................................191248.00248101217100200001411255619791000381121105030001400000000000000000002275000000000000000000
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTAA.................................................................................................................................................................251216.002160010001000003000001150234344352412375432391068000000000000000000000204110000000000000
................................................................................................................CTCTTCAAGG-GGTTGTGAAATG...............................................................................................................................................................................................................221204.002040023405010000024053213111000003060004210000000000000100000001046200000200000004310
............................................................................................................................................................TATCACAGCCATTTTGATGAGC....................................................................................................................................................................221149.001490511030000000000031210103000002103000000000000000000000000000023000000000000000000
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTCA.................................................................................................................................................................251139.00139000033100000000000001100102322519435090100511000000000000000000000201100000000000000
................................................................................................................................................................ACAGCCATTTTGATGAGT....................................................................................................................................................................181124.001240000101101000034377421013000007224060030030000000000000000000139000000000000000000
.............................................................................................................................................................ATCACAGCCATTTTGATGAGTT...................................................................................................................................................................221115.00115008421000000000011100001300001110000000000000000000000000000000000000000000000000
............................................................................................................................................................TATCACAGCCATTTTGATGA......................................................................................................................................................................20196.00960427600000000005512330620000024010020000000000000000000000000111100000010000000000
.............................................................................................................................................................ATCACAGCCATTTTGATGAGT....................................................................................................................................................................21196.009600787000000000011200002000000000500000000000000000000000000000000000000000000000
............................................................................................................................................................TATCACAGCCATTTTGATG.......................................................................................................................................................................19183.00830351510000000000321202023000000201100000000000000000000000011011000000000000000000
............................................................................................................................................................TATCACAGCCATTTTGATGAGTA...................................................................................................................................................................23179.00790002000000000013014360100020141361502010012000000000000000000002000000000000000000
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTG..................................................................................................................................................................24175.00750010000000000025153021200000101421202001103000000000000000000008000000000000000000
................................................................................................................................................................ACAGCCATTTTGATGAGTTC..................................................................................................................................................................20173.007300101800000000000000800100009368090000316000000000000000000000000000000000000000
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTCT.................................................................................................................................................................25161.0061000000000000000000002000010099524000000010000000000000000000000100000000000000000
................................................................................................................................................................ACAGCCATTTTGATGAGTTT..................................................................................................................................................................20142.00420000020000000023100327100000132104000008000000000000000000002000000000000000000
............................................................................................................................................................TATCACAGCCATTTTGATGAGTAA..................................................................................................................................................................24141.004100001000000000000010000100003451011134023000000000000000000001000000000000000000
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTTT.................................................................................................................................................................25137.00370000000000000044022204200000381500000000000000000000000000000000000000000000000
............................................................................................................................................................TATCACAGCCATTTTGATGAGA....................................................................................................................................................................22134.00340070000000000022011211200000024600000000000000000000000000003000000000000000000
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTAAA................................................................................................................................................................26225.005000000000000030000000100211512126401311310000000000000000000000000100100000000000
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTTA.................................................................................................................................................................25123.00230000020000000010000010000000330301001003000000000000000000000000500000000000000
.................................................................................................................TCTTCAAGG-GGTTGTGAAATG...............................................................................................................................................................................................................21121.00210012000000000000010101000001111100000000000000000000000000042300000000000000001
..............................................................................................................................................................TCACAGCCATTTTGATGAGT....................................................................................................................................................................20118.00180032000000000101021000300000320000000000000000000000000000000000000000000000000
.............................................................................................................................................................ATCACAGCCATTTTGATGAG.....................................................................................................................................................................20117.001700170000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................TCACAGCCATTTTGATGAGTT...................................................................................................................................................................21115.00150034000000000000000001000000210100000000000000000000000000011100000000000000000
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTTC.................................................................................................................................................................25114.00140000000000000000000040000000121300000003000000000000000000000000000000000000000
............................................................................................................................................................TATCACAGCCATTTTGAT........................................................................................................................................................................18114.00140200000000000011111011000000200200000000000000000000000000001000000000000000000
...............................................................................................................................................................CACAGCCATTTTGATGAGTT...................................................................................................................................................................20111.00110016100000000000010000000000000000000000000000000000000000011000000000000000000
............................................................................................................................................................TATCACAGCCATTTTGATGAGTG...................................................................................................................................................................23110.00100003000000000000000000010000000000000000000000000000000000013002000000000000000
............................................................................................................................................................TATCACAGCCATTTTGATGAGG....................................................................................................................................................................22110.00100300000000000010000000000000000000000000000000000000000000006000000000000000000
............................................................................................................................................................TATCACAGCCATTTTGATGAGTCC..................................................................................................................................................................24110.00100000011000000000000010000100001101000003000000000000000000000000000000000000000
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTAT.................................................................................................................................................................25110.00100000000000000000000000000000420301000000000000000000000000000000000000000000000
............................................................................................................................................................TATCACAGCCATTTTGATGAGTCA..................................................................................................................................................................24110.00100000000000000000000000000000151201000000000000000000000000000000000000000000000
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTTCC................................................................................................................................................................2619.0090000011000000000000000000000030002000002000000000000000000000000000000000000000
................................................................................................................................................................ACAGCCATTTTGATGAGTTA..................................................................................................................................................................2018.0080000110000000000000000000000101000000004000000000000000000000000000000000000000
............................................................................................................................................................TATCACAGCCATTTTGATGAC.....................................................................................................................................................................2118.0080401000000000000000000000000000000000000000000000000000000003000000000000000000
.............................................................................................................................................................ATCACAGCCATTTTGATGAGTTT..................................................................................................................................................................2318.0080043000000000000000000000000000100000000000000000000000000000000000000000000000
.................................................................................................................................................................CAGCCATTTTGATGAGTT...................................................................................................................................................................1817.0070002000000000001100000010000010100000000000000000000000000000000000000000000000
............................................................................................................................................................TATCACAGCCATTTTGATC.......................................................................................................................................................................1917.0070000000000000000000000000000320200000000000000000000000000000000000000000000000
............................................................................................................................................................TATCACAGCCATTTTGA.........................................................................................................................................................................1736.67200000000000000000000000000000000000000000000000000200000000000009600200000000001
............................................................................................................................................................TATCACAGCCATTTTGATGAA.....................................................................................................................................................................2115.0050000000000000000101001000000100000000000000000000000000000001000000000000000000
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTTTCC...............................................................................................................................................................2715.0050000000000000000000000000100010201000000000000000000000000000000000000000000000
..............................................................................................................................................................TCACAGCCATTTTGATGAGTTT..................................................................................................................................................................2215.0050001000000000012000000000000010000000000000000000000000000000000000000000000000
...............................................................................................................................................................CACAGCCATTTTGATGAGT....................................................................................................................................................................1915.0050030000000000000101000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................TATCACAGCCATTTTGATGAT.....................................................................................................................................................................2114.0040000000000000000010000010000000000000000000000000000000000002000000000000000000
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTTTT................................................................................................................................................................2614.0040000000001000000000000000000102000000000000000000000000000000000000000000000000
...........................................................................................................................................................ATATCACAGCCATTTTGATGAGTT...................................................................................................................................................................2414.0040040000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................ATCACAGCCATTTTGATGA......................................................................................................................................................................1914.0040040000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTCTC................................................................................................................................................................2614.0040000100000000000000010000000011000000000000000000000000000000000000000000000000
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTTAA................................................................................................................................................................2623.5070000000000000000000000000021111100000000000000000000000000000000000000000000000
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTCAA................................................................................................................................................................2623.5070000000000000000000000000010200201010000000000000000000000000000000000000000000
............................................................................................CCACTC-AATTCTTGCGTAA......................................................................................................................................................................................................................................1913.0030000000000000010000000000000100000000000000000000000000000001000000000000000000
droMoj3
GACTACAAC------------------AAACACAACCAACAAGTGTTTGC---A-TCT-----CATTATATGGGACACTTAACGATCTCCGCCCATTC-AATTCTTGCGTAACTCTTCAAGG-GGTTGTGAAATGTAGCC-ATT--A-TCAAGTCATATCACAGCCATTTTGATGAGTTTCGTGTGAA--TTGCTTTCAG------CA-------TTGTCCC------------ATCCGTTTTGTGTCACTGGATT--A-----------------------------------------TCCACCTCAATCTCCATCTTCATTTGCATT----CGAATTGCSizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
............................................................................................................................................................TATCACAGCCATTTTGATGAGTT...................................................................................................................................................................231190549.0019054929361155441457518163827569
............................................................................................................................................................TATCACAGCCATTTTGATGAGT....................................................................................................................................................................22117075.001707513529341070172111853145
............................................................................................................................................................TATCACAGCCATTTTGATGAGTC...................................................................................................................................................................2319237.0092377166192070
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTT..................................................................................................................................................................2413042.0030425982122264249025
.............................................................................................................................................................ATCACAGCCATTTTGATGAGTT...................................................................................................................................................................2212246.00224628951319480
............................................................................................................................................................TATCACAGCCATTTTGATGAGC....................................................................................................................................................................2211724.0017241421117060
................................................................................................................CTCTTCAAGG-GGTTGTGAAATG...............................................................................................................................................................................................................221999.0099954366125373
............................................................................................................................................................TATCACAGCCATTTTGATGAG.....................................................................................................................................................................211795.00795160289012038116
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTC..................................................................................................................................................................241423.004231314543816
..............................................................................................................................................................TCACAGCCATTTTGATGAGTT...................................................................................................................................................................211362.0036259123450
................................................................................................................................................................ACAGCCATTTTGATGAGTT...................................................................................................................................................................191351.0035129247951150
.............................................................................................................................................................ATCACAGCCATTTTGATGAGT....................................................................................................................................................................211243.002431341111060
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTA..................................................................................................................................................................241223.0022361012131811
...............................................................................................................................................................CACAGCCATTTTGATGAGTT...................................................................................................................................................................201217.0021752122070
............................................................................................................................................................TATCACAGCCATTTTGATGAGTG...................................................................................................................................................................231111.0011110021080
.............................................................................................................................................................ATCACAGCCATTTTGATGAGTC...................................................................................................................................................................221107.0010700001070
.................................................................................................................................................................CAGCCATTTTGATGAGTT...................................................................................................................................................................181101.001012111960
............................................................................................................................................................TATCACAGCCATTTTGATGAGCC...................................................................................................................................................................23190.00900001890
............................................................................................................................................................TATCACAGCCATTTTGATGA......................................................................................................................................................................20175.0075244710300
................................................................................................................................................................ACAGCCATTTTGATGAGT....................................................................................................................................................................18165.0065220172420
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTG..................................................................................................................................................................24149.00493232390
.............................................................................................................................................................ATCACAGCCATTTTGATGAGTTT..................................................................................................................................................................23146.00462000431
............................................................................................................................................................TATCACAGCCATTTTGATGAGTA...................................................................................................................................................................23137.00372043280
............................................................................................................................................................TATCACAGCCATTTTGATGAGA....................................................................................................................................................................22135.00355115230
............................................................................................................................................................TATCACAGCCATTTTGATGAGAC...................................................................................................................................................................23128.00280000280
...........................................................................................................................................................ATATCACAGCCATTTTGATGAGTT...................................................................................................................................................................24126.00261000250
............................................................................................................................................................TATCACAGCCATTTTGATG.......................................................................................................................................................................19124.00241405500
...............................................................................................................................................................CACAGCCATTTTGATGAGTC...................................................................................................................................................................20124.00240000240
..............................................................................................................................................................TCACAGCCATTTTGATGAGT....................................................................................................................................................................20124.00244003170
.............................................................................................................................................................ATCACAGCCATTTTGATGAGC....................................................................................................................................................................21122.00220000220
..............................................................................................................................................................TCACAGCCATTTTGATGAGTC...................................................................................................................................................................21122.00220000220
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTTT.................................................................................................................................................................25120.00201132130
............................................................................................................................................................TATCACAGCCATTTTGATGAGG....................................................................................................................................................................22118.0018052380
.............................................................................................................................................................ATCACAGCCATTTTGATGAG.....................................................................................................................................................................20117.00171400030
................................................................................................................CTCTTCAAGG-GGTTGTGAAAT................................................................................................................................................................................................................21115.00150100140
................................................................................................................CTCTTCAAGG-GGTTGTGAAA.................................................................................................................................................................................................................20115.00150001140
............................................................................................................................................................TATCACAGCCATTTTGATGAC.....................................................................................................................................................................21113.00130000130
...............................................................................................................................................................CACAGCCATTTTGATGAGT....................................................................................................................................................................19112.0012220080
................................................................................................................................................................ACAGCCATTTTGATGAGTC...................................................................................................................................................................19111.00110000110
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTAA.................................................................................................................................................................2519.009301131
.............................................................................................................................................................ATCACAGCCATTTTGATGAGTTA..................................................................................................................................................................2319.009200070
..............................................................................................................................................................TCACAGCCATTTTGATGAGTTT..................................................................................................................................................................2217.007000070
............................................................................................................................................................TATCACAGCCATTTTGATGATC....................................................................................................................................................................2217.007000070
droGri2
CATTATTTT--AT-TCTTGCATA----C-----ATCTGCAGACTGTGAGC---G-AAC-----CAAGC------------------------CCACCC-AATTCTTGCGTAACTCTTCAAGG-GGTTGTGAAATGTGGG-TATT--A-TCAAGTCATATCACAGCCATTTTGATGAGTTTCGTGCGAA--TTGCTT-TCATCACAGTG-AT--CATTGTCCC-------------TCG----------------------C--CGGG---GCCGGTTCG--------TGCAGTCGCCGCCTCCTCCTGTTCCTCCTCCTT---------C----TCCTTTGTSizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
............................................................................................................................................................TATCACAGCCATTTTGATGAGTT...................................................................................................................................................................231455.00455293162
............................................................................................................................................................TATCACAGCCATTTTGATGAGT....................................................................................................................................................................221180.0018014436
.............................................................................................................................................................ATCACAGCCATTTTGATGAGTT...................................................................................................................................................................22128.0028280
............................................................................................................................................................TATCACAGCCATTTTGATGAG.....................................................................................................................................................................21121.0021201
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTT..................................................................................................................................................................24119.0019118
.............................................................................................................................................................ATCACAGCCATTTTGATGAGT....................................................................................................................................................................21117.0017170
................................................................................................................CTCTTCAAGG-GGTTGTGAAATG...............................................................................................................................................................................................................2214.00422
............................................................................................................................................................TATCACAGCCATTTTGATGA......................................................................................................................................................................2013.00321
..............................................................................................................................................................TCACAGCCATTTTGATGAGTT...................................................................................................................................................................2112.00220
............................................................................................................................................................TATCACAGCCATTTTGATG.......................................................................................................................................................................1912.00220
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTA..................................................................................................................................................................2412.00220
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTC..................................................................................................................................................................2412.00220
.............................................................................................................................................................ATCACAGCCATTTTGATGAGTTT..................................................................................................................................................................2311.00110
............................................................................................................................................................TATCACAGCCATTTTGATGAGTTG..................................................................................................................................................................2411.00110
...........................................................................................................................................................ATATCACAGCCATTTTGATGAGTT...................................................................................................................................................................2411.00110
..............................................................................................................................................................TCACAGCCATTTTGATGAGT....................................................................................................................................................................2011.00110
............................................................................................................................................................TATCACAGCCATTTTGATGAGC....................................................................................................................................................................2211.00101
...........................................................................................................................................................ATATCACAGCCATTTTGATGAG.....................................................................................................................................................................2211.00110
............................................................................................................................................................TATCACAGCCATTTTGATGAGTA...................................................................................................................................................................2320.50101
............................................................................................................................................................TATCACAGCCATTTTGAGT.......................................................................................................................................................................1960.17101

Generated: 10/20/2015 at 06:46 PM