ID:

dse-mir-133

 Coordinate:

scaffold_18:496883-496973 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

5pUTR

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-39.5 -39.3 -39.3

Flybase annnotation

utr5 [utr5_plus_2657]; pre_miRNA [Dsec\mir-133-RM]; miRNA [Dsec\miR-133-RA]

No Repeatable elements found

Sense Strand Reads

CAGCGCCCTAATGAAACTCGGCTCGCTTTCGCCACATTCGAGATTTGCACCTGCAACGCTGTGTGTAGCTGGTTGACATCGGGTCAGATCTGTTTTTTAAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTGGTTGCTGACATCGAAAGCCTAGCGAACTGCGATGGATTATTATTTTCCAGGTGAGCT

***************************************************.(((((((((..(((((((((((((....(((((((((((........)).)))))).)))..)))))))))))))..)))).)))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total V115

head

 V113

male body		 V114

embryo

 M054

female body
........................................................................................................TTGGTCCCCTTCAACCAGCTGT................................................................. 22 0 1 109751.00 109751 76208 16470 12266 4807
........................................................................................................TTGGTCCCCTTCAACCAGCTG.................................................................. 21 0 1 9396.00 9396 6150 285 167 2794
........................................................................................................TTGGTCCCCTTCAACCAGCT................................................................... 20 0 1 5839.00 5839 5257 201 24 357
........................................................................................................TTGGTCCCCTTCAACCAGCTGTT................................................................ 23 1 1 1477.00 1477 1258 126 50 43
..................................................................AGCTGGTTGACATCGGGTCAGAT...................................................................................................... 23 0 1 1363.00 1363 600 109 635 19
........................................................................................................TTGGTCCCCTTCAACCAG..................................................................... 18 0 1 1020.00 1020 830 126 63 1
........................................................................................................TTGGTCCCCTTCAACCAGCTGA................................................................. 22 1 1 574.00 574 476 82 4 12
..................................................................AGCTGGTTGACATCGGGTCAGA....................................................................................................... 22 0 1 456.00 456 113 14 329 0
.........................................................................................................TGGTCCCCTTCAACCAGCTGT................................................................. 21 0 1 440.00 440 70 8 18 344
........................................................................................................TTGGTCCCCTTCAACCAGCTGTA................................................................ 23 0 1 321.00 321 254 23 12 32
........................................................................................................TTGGTCCCCTTCAACCAGATGT................................................................. 22 1 1 240.00 240 99 139 2 0
........................................................................................................TTGGTCACCTTCAACCAGCTGT................................................................. 22 1 1 226.00 226 199 3 4 20
........................................................................................................TTGGTCCCCTTCAACCAGCTGC................................................................. 22 1 1 209.00 209 133 37 32 7
........................................................................................................TTGGTCCACTTCAACCAGCTGT................................................................. 22 1 1 195.00 195 174 3 3 15
........................................................................................................TTGGTCCCATTCAACCAGCTGT................................................................. 22 1 1 188.00 188 152 7 7 22
........................................................................................................TTGGCCCCCTTCAACCAGCTGT................................................................. 22 1 1 187.00 187 93 27 27 40
.........................................................................................................TGGTCCCCTTCAACCAGCTG.................................................................. 20 0 1 186.00 186 5 0 0 181
........................................................................................................TTGGTCCCCTTCAACCAGCTT.................................................................. 21 1 1 186.00 186 138 9 0 39
.........................................................................................................TTGTCCCCTTCAACCAGCTGT................................................................. 21 1 1 159.00 159 101 10 25 23
........................................................................................................TTTGTCCCCTTCAACCAGCTGT................................................................. 22 1 1 151.00 151 98 15 9 29
........................................................................................................TTGGTCCCCTTCAACCAGCCGT................................................................. 22 1 1 150.00 150 119 16 15 0
........................................................................................................TTGGTCCCCTTCAACCGGCTGT................................................................. 22 1 1 136.00 136 92 24 11 9
........................................................................................................TTGGTCCCCTTCAACCAGTTGT................................................................. 22 1 1 124.00 124 19 79 24 2
........................................................................................................TTGGTCCCCTTCAACCAGCTTT................................................................. 22 1 1 120.00 120 49 2 8 61
........................................................................................................TTGGTACCCTTCAACCAGCTGT................................................................. 22 1 1 117.00 117 107 7 1 2
........................................................................................................TTGTTCCCCTTCAACCAGCTGT................................................................. 22 1 1 116.00 116 73 16 15 12
........................................................................................................TTGGTCCCCTTCAACCACCTGT................................................................. 22 1 1 114.00 114 70 18 17 9
........................................................................................................TTGGTCCTCTTCAACCAGCTGT................................................................. 22 1 1 111.00 111 46 1 60 4
........................................................................................................TTGGTCCCCTTCAACTAGCTGT................................................................. 22 1 1 109.00 109 48 9 43 9
........................................................................................................TTGGTCCCCCTCAACCAGCTGT................................................................. 22 1 1 109.00 109 73 14 21 1
.......................................................................................................CTTGGTCCCCTTCAACCAGCTGT................................................................. 23 1 1 108.00 108 81 7 11 9
........................................................................................................TTGGTCCCCTTCAACCATCTGT................................................................. 22 1 1 106.00 106 78 18 8 2
........................................................................................................CTGGTCCCCTTCAACCAGCTGT................................................................. 22 1 1 96.00 96 65 17 9 5
........................................................................................................TTGGTCCCCTTCAACCCGCTGT................................................................. 22 1 1 93.00 93 68 13 12 0
........................................................................................................TTCGTCCCCTTCAACCAGCTGT................................................................. 22 1 1 93.00 93 67 11 4 11
........................................................................................................TCGGTCCCCTTCAACCAGCTGT................................................................. 22 1 1 92.00 92 58 17 11 6
........................................................................................................TTGGTCCCCTTCAGCCAGCTGT................................................................. 22 1 1 91.00 91 71 4 15 1
........................................................................................................TTGGTCCCCTTCAACCAGGTGT................................................................. 22 1 1 90.00 90 9 80 0 1
........................................................................................................TTGGTCCCCTTTAACCAGCTGT................................................................. 22 1 1 90.00 90 31 9 32 18
........................................................................................................TTGATCCCCTTCAACCAGCTGT................................................................. 22 1 1 89.00 89 68 8 9 4
........................................................................................................TTGGTCCCCTTCAATCAGCTGT................................................................. 22 1 1 89.00 89 36 11 37 5
........................................................................................................TTGGTCCCCTTCGACCAGCTGT................................................................. 22 1 1 88.00 88 55 10 19 4
..................................................................AGCTGGTTGACATCGGGTCAG........................................................................................................ 21 0 1 85.00 85 62 3 19 1
........................................................................................................TTGCTCCCCTTCAACCAGCTGT................................................................. 22 1 1 83.00 83 60 2 13 8
........................................................................................................TTGGTTCCCTTCAACCAGCTGT................................................................. 22 1 1 82.00 82 34 12 33 3
........................................................................................................TTGGTCCCCTTCAACCAGCAGT................................................................. 22 1 1 82.00 82 82 0 0 0
........................................................................................................TTGGTCCCCTCCAACCAGCTGT................................................................. 22 1 1 80.00 80 53 13 12 2
........................................................................................................TTGGTCCCTTTCAACCAGCTGT................................................................. 22 1 1 79.00 79 34 8 36 1
........................................................................................................TTGGTCCCCTTCAACCAGCTGTTT............................................................... 24 2 1 76.00 76 71 3 0 2
........................................................................................................TTGGTCCCCTTCAACCAGCTGTC................................................................ 23 1 1 70.00 70 56 10 3 1
........................................................................................................TTGGTCCCCATCAACCAGCTGT................................................................. 22 1 1 66.00 66 61 2 3 0
........................................................................................................TTGGTCCCCTTCAACCAACTGT................................................................. 22 1 1 64.00 64 52 7 3 2
........................................................................................................TTAGTCCCCTTCAACCAGCTGT................................................................. 22 1 1 63.00 63 39 10 5 9
........................................................................................................ATGGTCCCCTTCAACCAGCTGT................................................................. 22 1 1 58.00 58 47 4 3 4
........................................................................................................TTGGTCTCCTTCAACCAGCTGT................................................................. 22 1 1 56.00 56 36 4 12 4
........................................................................................................TTGGTCCCCTTCAACAAGCTGT................................................................. 22 1 1 55.00 55 37 6 12 0
........................................................................................................TTGGTCCCCTTCAACCAGCTGG................................................................. 22 1 1 51.00 51 28 9 2 12
........................................................................................................TTGGTCCCCTTAAACCAGCTGT................................................................. 22 1 1 50.00 50 40 7 3 0
........................................................................................................TAGGTCCCCTTCAACCAGCTGT................................................................. 22 1 1 50.00 50 45 1 1 3
........................................................................................................TTGGTCCCCTTCAACCAGCTAT................................................................. 22 1 1 50.00 50 39 3 5 3
..........................................................................................................GGTCCCCTTCAACCAGCTGT................................................................. 20 0 1 47.00 47 26 8 3 10
........................................................................................................TTGGTCCCCTTCAACCAGCTCT................................................................. 22 1 1 46.00 46 28 5 9 4
.........................................................................................................TTGTCCCCTTCAACCAGCTG.................................................................. 20 1 1 45.00 45 28 0 0 17
........................................................................................................TTGGACCCCTTCAACCAGCTGT................................................................. 22 1 1 44.00 44 32 6 3 3
........................................................................................................TTGGTCCCCTTCCACCAGCTGT................................................................. 22 1 1 43.00 43 28 5 9 1
........................................................................................................GTGGTCCCCTTCAACCAGCTGT................................................................. 22 1 1 38.00 38 31 5 0 2
........................................................................................................TTGGTCCCCTTCAACCAGC.................................................................... 19 0 1 35.00 35 16 0 0 19
........................................................................................................TTGGTCCCCTTCAACCTGCTGT................................................................. 22 1 1 32.00 32 13 3 14 2
........................................................................................................TTGGTCCCCTTCACCCAGCTGT................................................................. 22 1 1 31.00 31 28 3 0 0
........................................................................................................TTGGTCCCCTTCAAACAGCTGT................................................................. 22 1 1 31.00 31 16 2 13 0
........................................................................................................TTGGGCCCCTTCAACCAGCTGT................................................................. 22 1 1 30.00 30 17 6 5 2
........................................................................................................TTTGTCCCCTTCAACCAGCTG.................................................................. 21 1 1 29.00 29 15 1 0 13
........................................................................................................TTGGCCCCCTTCAACCAGCTG.................................................................. 21 1 1 29.00 29 11 0 1 17
...........................................................................................................GTCCCCTTCAACCAGCTGT................................................................. 19 0 1 29.00 29 18 2 3 6
........................................................................................................TTGGTCCCATTCAACCAGCTG.................................................................. 21 1 1 28.00 28 15 2 0 11
...........................................................................................................TTCCCCTTCAACCAGCTGT................................................................. 19 1 1 28.00 28 22 2 1 3
........................................................................................................TTGGTCACCTTCAACCAGCTG.................................................................. 21 1 1 27.00 27 10 0 0 17
........................................................................................................TTGGTCCACTTCAACCAGCTG.................................................................. 21 1 1 26.00 26 17 0 0 9
........................................................................................................TTGGTCCCCTTCAACCAGCGGT................................................................. 22 1 1 26.00 26 12 4 3 7
........................................................................................................TTCGTCCCCTTCAACCAGCTG.................................................................. 21 1 1 26.00 26 16 0 0 10
........................................................................................................TTGTTCCCCTTCAACCAGCTG.................................................................. 21 1 1 24.00 24 15 0 1 8
........................................................................................................TTGGTCCCCTACAACCAGCTGT................................................................. 22 1 1 24.00 24 16 2 5 1
........................................................................................................TTGCTCCCCTTCAACCAGCTG.................................................................. 21 1 1 22.00 22 15 0 0 7
............................................................................................................TCCCCTTCAACCAGCTGT................................................................. 18 0 1 20.00 20 17 0 2 1
........................................................................................................TGGGTCCCCTTCAACCAGCTGT................................................................. 22 1 1 20.00 20 4 5 1 10
........................................................................................................TTGGTCCCCTTCAACCACCTG.................................................................. 21 1 1 20.00 20 10 0 0 10
........................................................................................................TTGGTCCCCTTCAACCAGCTA.................................................................. 21 1 1 20.00 20 17 2 0 1
........................................................................................................TTGGTCCCCTTCAACGAGCTGT................................................................. 22 1 1 19.00 19 14 0 4 1
........................................................................................................TTGGTACCCTTCAACCAGCTGA................................................................. 22 2 1 17.00 17 17 0 0 0
..................................................................AGCTGGTTGACATCGGGTCA......................................................................................................... 20 0 1 16.00 16 12 4 0 0
........................................................................................................TTGGTCCACTTCAACCAGCT................................................................... 20 1 1 16.00 16 15 0 0 1
........................................................................................................TTGGTCCCCTTCAACCAGCTGTGGTC............................................................. 26 2 1 16.00 16 4 1 11 0
........................................................................................................TTGGTCCCCTTCAACCAGCCG.................................................................. 21 1 1 15.00 15 14 0 0 1
........................................................................................................TTGGTCGCCTTCAACCAGCTGT................................................................. 22 1 1 15.00 15 10 3 0 2
........................................................................................................TTGGTCCCCTTGAACCAGCTGT................................................................. 22 1 1 15.00 15 13 1 0 1
........................................................................................................TTGGTCCCCTTCTACCAGCTGT................................................................. 22 1 1 14.00 14 3 3 8 0
........................................................................................................TTGGTACCCTTCAACCAGCT................................................................... 20 1 1 14.00 14 14 0 0 0
........................................................................................................TTGGTGCCCTTCAACCAGCTGT................................................................. 22 1 1 14.00 14 11 0 3 0
........................................................................................................TTGGTCCCCTTCAACCAGCTGTAT............................................................... 24 1 1 14.00 14 12 0 1 1
........................................................................................................TTGGTCCCCCTCAACCAGCTG.................................................................. 21 1 1 13.00 13 10 2 0 1
........................................................................................................TTGGTCCCAATCAACCAGCTGT................................................................. 22 2 1 13.00 13 13 0 0 0
........................................................................................................TTGGTCCCCTTCATCCAGCTGT................................................................. 22 1 1 13.00 13 7 1 4 1
........................................................................................................TTGGTCCCATTCAACCAGCT................................................................... 20 1 1 13.00 13 12 0 0 1
.........................................................................................................TGGTCCCCTTCAACCAGCT................................................................... 19 0 1 13.00 13 1 0 0 12
........................................................................................................TTTGTCCCCTTCAACCAGCT................................................................... 20 1 1 12.00 12 10 0 0 2
........................................................................................................TTGGTCCCCTTCAACCAGAT................................................................... 20 1 1 12.00 12 11 1 0 0
.......................................................................................................CTTGGTCCCCTTCAACCAGCTG.................................................................. 22 1 1 12.00 12 4 0 0 8
........................................................................................................TTGGTCCCCTTCAACCAGCAG.................................................................. 21 1 1 12.00 12 12 0 0 0
.........................................................................................................TTGGTCCCTTCAACCAGCTGT................................................................. 21 3 3 11.00 33 23 2 8 0
........................................................................................................TTGGTCCGCTTCAACCAGCTGT................................................................. 22 1 1 11.00 11 8 0 1 2
........................................................................................................TTGGTCCCCTTCAACCAGCTGTAA............................................................... 24 1 1 11.00 11 9 0 0 2
........................................................................................................TTGGTCACCTTCAACCAGCT................................................................... 20 1 1 10.00 10 10 0 0 0
........................................................................................................TTGGTCCCCTTCAACCAGCTC.................................................................. 21 1 1 10.00 10 9 0 0 1
..........................................................................................................TGTCCCCTTCAACCAGCTGT................................................................. 20 1 1 10.00 10 6 0 0 4
........................................................................................................TTGGTCCCCTTCAACCAACTG.................................................................. 21 1 1 10.00 10 7 0 0 3
........................................................................................................TTGGTCCCCACCAACCAGCTGT................................................................. 22 2 1 10.00 10 10 0 0 0
........................................................................................................TTGGTCCCCTTCAAGCAGCTGT................................................................. 22 1 1 10.00 10 7 3 0 0
........................................................................................................TTGGTCCCCTTCAACCGGCTG.................................................................. 21 1 1 10.00 10 6 0 0 4
........................................................................................................TTGGTCCCCTTCGACCAGCT................................................................... 20 1 1 9.00 9 8 1 0 0
........................................................................................................TTGCTCCCCTTCAACCAGCT................................................................... 20 1 1 9.00 9 8 1 0 0
.......................................................................................................TTTGGTCCCCTTCAACCAGCTGT................................................................. 23 0 1 9.00 9 1 0 0 8
........................................................................................................TTGGTCCCCTTCAACCAGTTG.................................................................. 21 1 1 9.00 9 5 1 1 2
..........................................................................................................GGTCCCCTTCAACCAGCTG.................................................................. 19 0 1 9.00 9 1 0 0 8
........................................................................................................TTGGTCCCCTTCAACCAGCTGAT................................................................ 23 2 1 9.00 9 6 1 2 0
........................................................................................................TTGGTCCCGTTCAACCAGCTGT................................................................. 22 1 1 9.00 9 8 1 0 0
........................................................................................................GTGGTCCCCTTCAACCAGCTG.................................................................. 21 1 1 9.00 9 7 0 0 2
........................................................................................................TTGGGCCCCTTCAACCAGCTAT................................................................. 22 2 1 8.00 8 8 0 0 0
........................................................................................................TTGGTCCCCTTCAACCAGATG.................................................................. 21 1 1 8.00 8 7 1 0 0
........................................................................................................TTCGTCCCCTTCAACCAGCT................................................................... 20 1 1 8.00 8 7 0 0 1
........................................................................................................TTGGTCCCCTTCAACCATCTG.................................................................. 21 1 1 8.00 8 4 0 0 4
........................................................................................................TTGGTCCCCTTTAACCAGCTG.................................................................. 21 1 1 8.00 8 2 0 0 6
........................................................................................................TTGGCCCCCTTCAACCAGCT................................................................... 20 1 1 8.00 8 4 0 0 4
........................................................................................................TTGGTCCCCTTCAACCAGCTGTTA............................................................... 24 2 1 8.00 8 8 0 0 0
........................................................................................................TTGGTACCCTTCAACCAGCTGC................................................................. 22 2 1 8.00 8 8 0 0 0
........................................................................................................TTGGTCAACTTCAACCAGCTGT................................................................. 22 2 1 8.00 8 7 0 1 0
........................................................................................................TTGGTCCCCTTCAACCACCT................................................................... 20 1 1 8.00 8 5 1 0 2
........................................................................................................TTGGTCCCCTTCAACCGGCT................................................................... 20 1 1 8.00 8 8 0 0 0
........................................................................................................TTGGTCCCCTTCAACCCGCT................................................................... 20 1 1 7.00 7 7 0 0 0
........................................................................................................TTGGTCCCCTTCAATCAGCTG.................................................................. 21 1 1 7.00 7 2 0 1 4
..................................................................ATCTGGTTGACATCGGGTCAGAT...................................................................................................... 23 1 1 7.00 7 2 0 5 0
.........................................................................................................TCGTCCCCTTCAACCAGCTGT................................................................. 21 1 1 7.00 7 5 0 1 1
..................................................................AGCTGGTTGACATCGGGCCAGAT...................................................................................................... 23 1 1 7.00 7 5 0 2 0
.........................................................................................................TTGTCCCCTTCAACCAGCT................................................................... 19 1 1 7.00 7 6 0 0 1
........................................................................................................TTGGTCCCCTTCAACTAGCTG.................................................................. 21 1 1 7.00 7 1 0 1 5
.......................................................................................................ATTGGTCCCCTTCAACCAGCTGT................................................................. 23 1 1 7.00 7 0 0 0 7
........................................................................................................TTGGTACCCTTCAACCAGCTG.................................................................. 21 1 1 7.00 7 7 0 0 0
........................................................................................................TTGGTCCCCTTCAACCATCT................................................................... 20 1 1 7.00 7 7 0 0 0
........................................................................................................TTGGTCCCCTCCAACCAGCTG.................................................................. 21 1 1 7.00 7 5 0 0 2
.......................................................................................................GTTGGTCCCCTTCAACCAGCTGT................................................................. 23 1 1 7.00 7 0 0 0 7
........................................................................................................TTGGTCCCCTTCAGCCAGCTG.................................................................. 21 1 1 7.00 7 6 0 0 1
......................................................................................................TCTTGGTCCCCTTCAACCAGCTGT................................................................. 24 2 1 7.00 7 6 0 1 0
..................................................................AGCTGGTTGACATCGGGTTAGAT...................................................................................................... 23 1 1 7.00 7 3 1 3 0
........................................................................................................TTGATCCCCTTCAACCAGCTG.................................................................. 21 1 1 7.00 7 4 0 0 3
........................................................................................................GAGGTCCCCTTCAACCAGCTGT................................................................. 22 2 1 6.00 6 6 0 0 0
.........................................................................................................TGGTCCCCTTCAACCAGCTGTT................................................................ 22 1 1 6.00 6 0 0 0 6
........................................................................................................TTGGTCCCCTTCAACCAGCA................................................................... 20 1 1 6.00 6 6 0 0 0
........................................................................................................TTGGTCCCCTTCAACCAGATGTT................................................................ 23 2 1 6.00 6 5 1 0 0
........................................................................................................TTGGTCCTCTTCAACCAGCTG.................................................................. 21 1 1 6.00 6 3 0 1 2
........................................................................................................TTGGTCCCCTTCACCCAGCT................................................................... 20 1 1 6.00 6 6 0 0 0
........................................................................................................TTGTTCCCCTTCAACCAGCT................................................................... 20 1 1 6.00 6 6 0 0 0
........................................................................................................TTGGTCCCCTTCAACAAGCTG.................................................................. 21 1 1 6.00 6 6 0 0 0
........................................................................................................ATGGTCCCCTTCAACCAGCTG.................................................................. 21 1 1 6.00 6 3 0 0 3
........................................................................................................TTGGTTCCCTTCAACCAGCTG.................................................................. 21 1 1 6.00 6 3 0 0 3
........................................................................................................TTGGTCCCCTTCGACCAGCTG.................................................................. 21 1 1 6.00 6 4 0 0 2
........................................................................................................TTGGTCCCCTTCAACCCGCTG.................................................................. 21 1 1 5.00 5 5 0 0 0
.........................................................................................................TTGTCCCCTTCAACCAGCTGTT................................................................ 22 2 1 5.00 5 5 0 0 0
......................................................................................................AATTGGTCCCCTTCAACCAGCTGT................................................................. 24 1 1 5.00 5 1 1 1 2
........................................................................................................TTGGTCCCCTTCAACCAGCC................................................................... 20 1 1 5.00 5 4 0 0 1
........................................................................................................TTGGTCCCTTTCAACCAGCTG.................................................................. 21 1 1 5.00 5 2 0 0 3
........................................................................................................TTGGTCCCCTTCAACCAGGTG.................................................................. 21 1 1 5.00 5 2 2 0 1
........................................................................................................TTGGTCCCCGTCAACCAGCTGT................................................................. 22 1 1 5.00 5 4 0 1 0
........................................................................................................TTGGTCCCAACCAACCAGCTGT................................................................. 22 3 1 5.00 5 5 0 0 0
.......................................................................................................TTTGGTCCCCTTCAACCAGCTG.................................................................. 22 0 1 5.00 5 0 0 1 4
..........................................................................................................TGTCCCCTTCAACCAGCTG.................................................................. 19 1 1 5.00 5 3 0 0 2
........................................................................................................TTGGTTCCCTTCAACCAGCT................................................................... 20 1 1 5.00 5 5 0 0 0
........................................................................................................ATGGTCCCCTTCAACCAGCT................................................................... 20 1 1 5.00 5 3 0 0 2
........................................................................................................TTGGTCCCCTTCAACCAAATGT................................................................. 22 2 1 5.00 5 5 0 0 0
........................................................................................................TTGGTCCCCTTCAACCTGCTG.................................................................. 21 1 1 4.00 4 2 0 0 2
........................................................................................................CTGGTCCCCTTCAACCAGCT................................................................... 20 1 1 4.00 4 4 0 0 0
........................................................................................................TTGGTCCCCTTCTTCCAGCTGT................................................................. 22 2 1 4.00 4 2 0 2 0
.........................................................................................................TTGCCCCCTTCAACCAGCTGT................................................................. 21 2 1 4.00 4 2 0 1 1
....................................................................CTGGTTGACATCGGGTCAGAT...................................................................................................... 21 0 1 4.00 4 1 1 1 1
.........................................................................................................TTGGCCCCTTCAACCAGCTGT................................................................. 21 2 1 4.00 4 1 2 1 0
........................................................................................................TTGGTCCCCTTCAACCCGCTGTT................................................................ 23 2 1 4.00 4 4 0 0 0
........................................................................................................AAGGTCCCCTTCAACCAGCTGT................................................................. 22 2 1 4.00 4 4 0 0 0
........................................................................................................TTGGTCCCCTTCAACCAGCTGTTC............................................................... 24 2 1 4.00 4 4 0 0 0
........................................................................................................TTGGTCTCCTTCAACCAGCTG.................................................................. 21 1 1 4.00 4 4 0 0 0
........................................................................................................TTGGTCCCCTTCAACCAGCGG.................................................................. 21 1 1 4.00 4 2 0 0 2
.........................................................................................................TGGTCCCCTTCAACCAGCTGG................................................................. 21 1 1 4.00 4 0 0 0 4
........................................................................................................GTGGTCCCCTTCAACCAGCT................................................................... 20 1 1 4.00 4 3 0 0 1
........................................................................................................TTGGTCCCCTTCAACTAGCT................................................................... 20 1 1 4.00 4 3 0 0 1
........................................................................................................TTGGTCCCCTTCAACCACCTGC................................................................. 22 2 1 4.00 4 3 0 1 0
........................................................................................................TTGGTCCCCTTCACCCAGCTG.................................................................. 21 1 1 4.00 4 3 1 0 0
........................................................................................................TAGGTCCCCTTCAACCAGCT................................................................... 20 1 1 4.00 4 4 0 0 0
........................................................................................................TTGGTCCAAATCAACCAGCTGT................................................................. 22 3 1 4.00 4 4 0 0 0
........................................................................................................TTGGTCACCTTCAACCAGCTGTT................................................................ 23 2 1 4.00 4 4 0 0 0
........................................................................................................TTGGTCTCCTTCAACCAGCT................................................................... 20 1 1 4.00 4 4 0 0 0
...........................................................................................................GTCCCCTTCAACCAGCTG.................................................................. 18 0 1 4.00 4 1 0 0 3
.........................................................................................................TCGTCCCCTTCAACCAGCTG.................................................................. 20 1 1 4.00 4 3 0 0 1
........................................................................................................TTGGTCCCCCTCAACCAGCT................................................................... 20 1 1 4.00 4 2 2 0 0
........................................................................................................TTGGTCCCATTCAACCAGCTGTT................................................................ 23 2 1 4.00 4 4 0 0 0
........................................................................................................TTGGTCCCCTTCAACCAGTT................................................................... 20 1 1 4.00 4 1 1 0 2
........................................................................................................TCGGTCCCCTTCAACCAGCT................................................................... 20 1 1 4.00 4 4 0 0 0
........................................................................................................TTGGTCCACTTCAACCAGCTGTT................................................................ 23 2 1 4.00 4 4 0 0 0
...........................................................................................................TTCCCCTTCAACCAGCTG.................................................................. 18 1 2 3.50 7 3 0 0 4
........................................................................................................TAGATCCCCTTCAACCAGCTGT................................................................. 22 2 1 3.00 3 3 0 0 0
........................................................................................................TTGGTCCCCTTCACCCAGCTGC................................................................. 22 2 1 3.00 3 3 0 0 0
........................................................................................................CTGGTCCCCTTCAACCAGCTG.................................................................. 21 1 1 3.00 3 3 0 0 0
........................................................................................................TGGGTCCCCTTCAACCAGCTG.................................................................. 21 1 1 3.00 3 2 0 0 1
........................................................................................................TAGGACCCCTTCAACCAGCTGT................................................................. 22 2 1 3.00 3 3 0 0 0
........................................................................................................TTGGTCCACTTCAACCAGCTTT................................................................. 22 2 1 3.00 3 0 0 0 3
.........................................................................................................TGGTCCCCTTCAACCATCTGT................................................................. 21 1 1 3.00 3 0 0 0 3
.........................................................................................................TCGTCCCCTTCAACCAGCTGTT................................................................ 22 2 1 3.00 3 2 0 0 1
........................................................................................................TTGGTCCCCTTCAACCAGCGT.................................................................. 21 2 1 3.00 3 3 0 0 0
........................................................................................................TTGGTCCCCTTCAGCCAGCTGTT................................................................ 23 2 1 3.00 3 3 0 0 0
..................................................................AGCTGGTTGACATCGGTTCAGAT...................................................................................................... 23 1 1 3.00 3 1 0 0 2
........................................................................................................TTGGTCCCTTTCAACCAGCT................................................................... 20 1 1 3.00 3 3 0 0 0
........................................................................................................TTGGGCCCCTTCAACCAGCTG.................................................................. 21 1 1 3.00 3 1 0 0 2
........................................................................................................TTGGTCCCCTTCAACCAACT................................................................... 20 1 1 3.00 3 3 0 0 0
........................................................................................................TTGGTCCCCTCCAACCAGCTGTT................................................................ 23 2 1 3.00 3 3 0 0 0
........................................................................................................TTGGTCCCCTACAACCAGCTG.................................................................. 21 1 1 3.00 3 3 0 0 0
..........................................................................................................GGTCCCCTTCAACCAGCT................................................................... 18 0 1 3.00 3 3 0 0 0
........................................................................................................TTGGTCCCCTTCAACCAGCTGAA................................................................ 23 1 1 3.00 3 3 0 0 0
........................................................................................................TTGGTCCCCAACAACCAGCTGT................................................................. 22 2 1 3.00 3 3 0 0 0
..................................................................AGCTGGTTGACATCGGGTCAGT....................................................................................................... 22 1 1 3.00 3 2 0 1 0
..................................................................AGCTGGTTGACATCGGGCCAGA....................................................................................................... 22 1 1 3.00 3 0 0 3 0
........................................................................................................TTGGTCCCCATCAACCAGCT................................................................... 20 1 1 3.00 3 3 0 0 0
........................................................................................................TTGGTCCCCTTAAACCAGCTG.................................................................. 21 1 1 3.00 3 3 0 0 0
........................................................................................................TTGGTCCCCTTCAACTAGCTGTT................................................................ 23 2 1 3.00 3 3 0 0 0
........................................................................................................TTGGTCCCCTTCAACCAGGT................................................................... 20 1 1 3.00 3 0 2 0 1
........................................................................................................TTGGACCCCTTCAACCAGCT................................................................... 20 1 2 3.00 6 6 0 0 0
.......................................................................................................ATTGGTCCCCTTCAACCAGCTG.................................................................. 22 1 1 3.00 3 0 0 0 3
........................................................................................................TTGGTCCCCTTCAACCCG..................................................................... 18 1 2 3.00 6 4 0 2 0
........................................................................................................TTGATCCCCTTCAACCAGCT................................................................... 20 1 2 3.00 6 6 0 0 0
........................................................................................................TTGGTCCCCCACAACCAGCTGT................................................................. 22 2 1 3.00 3 3 0 0 0
........................................................................................................TTGGTCCCCATCAACCAGCTG.................................................................. 21 1 1 3.00 3 3 0 0 0
........................................................................................................TCGGTCCCCTTCAACCAGCTG.................................................................. 21 1 1 3.00 3 1 0 0 2
........................................................................................................TTGGTCCCACTCAACCAGCTGT................................................................. 22 2 1 3.00 3 3 0 0 0
........................................................................................................TTGGTCCCCTTCAACCCGCTGC................................................................. 22 2 1 3.00 3 2 0 1 0
..................................................................AGCTGGTTGACATTGGGTCAGAT...................................................................................................... 23 1 1 3.00 3 1 0 2 0
........................................................................................................TTGGTCACCTTCAACCAGCTGTA................................................................ 23 1 1 3.00 3 1 0 0 2
........................................................................................................TTAGTCCCCTTCAACCAGCTG.................................................................. 21 1 1 3.00 3 2 0 0 1
........................................................................................................TTGGTCCCCTTCCACCAGCTG.................................................................. 21 1 1 3.00 3 2 1 0 0
........................................................................................................TTGGTCCCCTTCAGCCAGCT................................................................... 20 1 1 3.00 3 2 1 0 0
.........................................................................................................TGGTACCCTTCAACCAGCTGT................................................................. 21 1 1 3.00 3 1 0 0 2
..........................................................................................................TTTCCCCTTCAACCAGCTGT................................................................. 20 2 2 2.50 5 3 1 0 1
..................................................................AGCTGGTTGACATCAGGTCAGA....................................................................................................... 22 1 1 2.00 2 0 0 2 0
........................................................................................................TTCTTCCCCTTCAACCAGCTG.................................................................. 21 2 1 2.00 2 1 0 0 1
..................................................................AGCTGGTTGACATCTGGTCAGAT...................................................................................................... 23 1 1 2.00 2 2 0 0 0
..................................................................AGTTGGTTGACATCGGGTCAGA....................................................................................................... 22 1 1 2.00 2 0 0 2 0
........................................................................................................TTGGTCCCCTGCAACCAGCTGT................................................................. 22 1 1 2.00 2 2 0 0 0
..................................................................AGCTGGTCGACATCGGGTCAGAT...................................................................................................... 23 1 1 2.00 2 0 0 2 0
........................................................................................................TTGTTCCCCTTCAACCAGCTGTAT............................................................... 24 2 1 2.00 2 2 0 0 0
........................................................................................................TTGGTCCACTTCAACCAGCTT.................................................................. 21 2 1 2.00 2 1 0 0 1
..................................................................AGCTGGCTGACATCGGGTCAGAT...................................................................................................... 23 1 1 2.00 2 0 0 2 0
..................................................................AGCTGGTTGACATCGGGTCAGG....................................................................................................... 22 1 1 2.00 2 0 1 1 0
........................................................................................................TTGGTCCCCCTCAACCAG..................................................................... 18 1 1 2.00 2 1 1 0 0
..................................................................AGCTGGTTGACATCGGGACAGAT...................................................................................................... 23 1 1 2.00 2 2 0 0 0
........................................................................................................TTGGTCCCCTTCAACAACCTGT................................................................. 22 2 1 2.00 2 2 0 0 0
........................................................................................................TTGGTCCCATTCAACCAGCTGA................................................................. 22 2 1 2.00 2 1 0 0 1
.........................................................................................................CGGTCCCCTTCAACCAGCTGT................................................................. 21 1 1 2.00 2 2 0 0 0
........................................................................................................TTGGTCCCCTTCAACAAGCTGC................................................................. 22 2 1 2.00 2 0 0 2 0
........................................................................................................TTGGTCCACTTCAACCAG..................................................................... 18 1 1 2.00 2 2 0 0 0
..................................................................ACCTGGTTGACATCGGGTCAGA....................................................................................................... 22 1 1 2.00 2 1 0 1 0
........................................................................................................TTGGTCCCCTTCTACCAGCTG.................................................................. 21 1 1 2.00 2 2 0 0 0
........................................................................................................TTGGTCCCCTTCAACTAG..................................................................... 18 1 1 2.00 2 2 0 0 0
..................................................................AGCTGGTTCACATCGGGTCAGAT...................................................................................................... 23 1 1 2.00 2 1 0 1 0
........................................................................................................TTGGTCCCCTCCAACCAGCT................................................................... 20 1 1 2.00 2 1 1 0 0
..................................................................AGCTGGTTTACATCGGGTCAGAT...................................................................................................... 23 1 1 2.00 2 2 0 0 0
..................................................................AGCTGGTTGACATCGGGTCAGGT...................................................................................................... 23 1 1 2.00 2 0 0 2 0
..................................................................ACCTGGTTGACATCGGGTCAGAT...................................................................................................... 23 1 1 2.00 2 2 0 0 0
........................................................................................................TTGGACCCCTTCAACCAGCTG.................................................................. 21 1 1 2.00 2 2 0 0 0
........................................................................................................TCGGTCCCCTTCAACCAGCTGA................................................................. 22 2 1 2.00 2 2 0 0 0
........................................................................................................TTTGTCCCCTTCAACCAGCTGTT................................................................ 23 2 1 2.00 2 2 0 0 0
........................................................................................................TTGGTCCCTTTCAACCAGCTGTT................................................................ 23 2 1 2.00 2 2 0 0 0
.........................................................................................................TGGTCCCCTTCAACCAGCTGTA................................................................ 22 0 1 2.00 2 1 0 0 1
.........................................................................................................TGGCCCCCTTCAACCAGCTG.................................................................. 20 1 1 2.00 2 0 0 0 2
.......................................................................................................CTTGGTCCCCTTCAACCAGCT................................................................... 21 1 1 2.00 2 2 0 0 0
........................................................................................................TTGGTCCCCTTCAACCAACTGC................................................................. 22 2 1 2.00 2 2 0 0 0
........................................................................................................TTGGTCCCCTTTAACCAGCT................................................................... 20 1 1 2.00 2 1 0 0 1
........................................................................................................TTGGTCCCCTTCAACCAGTTGTT................................................................ 23 2 1 2.00 2 2 0 0 0
.........................................................................................................TGGTCTCCTTCAACCAGCTGT................................................................. 21 1 1 2.00 2 0 0 0 2
........................................................................................................TTGCTCCCCTTCAACCAGCTGTT................................................................ 23 2 1 2.00 2 1 1 0 0
.......................................................................................................GTTGGTCCCCTTCAACCAGCTG.................................................................. 22 1 1 2.00 2 0 0 0 2
........................................................................................................TTGGTCCCCTTCAAAAAGCTGT................................................................. 22 2 1 2.00 2 2 0 0 0
..................................................................AGCCGGTTGACATCGGGTCAGA....................................................................................................... 22 1 1 2.00 2 1 0 1 0
........................................................................................................TATCTCCCCTTCAACCAGCTGT................................................................. 22 3 1 2.00 2 2 0 0 0
.........................................................................................................TGGTCCCCTTCAACCAGCTTT................................................................. 21 1 1 2.00 2 0 0 0 2
.......................................................................................................CTTGGTCCCCTTCAACCAGCTGA................................................................. 23 2 1 2.00 2 1 1 0 0
.........................................................................................................TGGTCCCCTTCAACCAGATGT................................................................. 21 1 1 2.00 2 0 0 0 2
........................................................................................................TTGGACCCCTTCAACCAGCTAT................................................................. 22 2 2 2.00 4 4 0 0 0
........................................................................................................TTGGTCCCCTTCAACCTG..................................................................... 18 1 2 2.00 4 1 1 0 2
.........................................................................................................TGGTCCCCTTCAACCAGCTT.................................................................. 20 1 1 2.00 2 0 0 0 2
........................................................................................................TTCTTCCCCTTCAACCAGCTGT................................................................. 22 2 1 2.00 2 2 0 0 0
........................................................................................................TTGGTCCGCTTCAACCAGCTG.................................................................. 21 1 1 2.00 2 1 0 0 1
..................................................................AGCTGGTTGACATCGGGTC.......................................................................................................... 19 0 1 2.00 2 0 0 2 0
........................................................................................................TTCGTCCCCTTCAACTAGCTGT................................................................. 22 2 1 2.00 2 1 0 1 0
........................................................................................................TTGGCCCCCTTCAACCAGCTGA................................................................. 22 2 1 2.00 2 1 0 1 0
........................................................................................................TTGTTCCCATTCAACCAGCTGT................................................................. 22 2 1 2.00 2 1 0 0 1
..................................................................AGCTGGTTGGCATCGGGTCAGA....................................................................................................... 22 1 1 2.00 2 1 0 1 0
........................................................................................................TTGGTCCCACCCAACCAGCTGT................................................................. 22 3 1 2.00 2 2 0 0 0

Anti-sense strand reads

GTCGCGGGATTACTTTGAGCCGAGCGAAAGCGGTGTAAGCTCTAAACGTGGACGTTGCGACACACATCGACCAACTGTAGCCCAGTCTAGACAAAAAATTCGTAAACCAGGGGAAGTTGGTCGACATCGGTCACCAACGACTGTAGCTTTCGGATCGCTTGACGCTACCTAATAATAAAAGGTCCACTCGA

**************************************************.(((((((((..(((((((((((((....(((((((((((........)).)))))).)))..)))))))))))))..)))).)))))..*************************************************** 		Read size # Mismatch Hit Count Total Norm Total M054

female body
..CGCGGGATAAGTCTGAGC........................................................................................................................................................................... 18 3 20 0.05 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droSec2 scaffold_18:496833-497023 + dse-mir-133 Known_mirbase CA---GCGCCCTAATGAA--------------------------ACTCGGCTCGCTTTC--GC------------------CAC---------------------------------ATTCGA--G-ATTTGCACCTGCAAC-GCTGTGTGTAGCTGGTTGACATCGGGTCAGATCTGT--TT--TTTAAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTGGTTGCTGACATCGAAAGCCTAGCGAACTG--CGATGGAT-----------------------TATTATTTTCC-A--------------------------------------------------------------------------------------------GGTGAGCT
droSim2 2l:20064840-20065031 + dsi-mir-133 Known_mirbase CA---GCGTCCTAATGAA--------------------------ACTCGGCTCGATTTC--GC------------------CGC---------------------------------ATTCAA--AAATCTGCACCTGCAAC-GCTGTGTGTAGCTGGTTGACATCGGGTCAGATCTGT--TT--TTTAAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTGGTTGCTGACATCGAAAGCCGAGGGAACTG--CGATGGAT-----------------------TATTATTTTCC-A--------------------------------------------------------------------------------------------GGTGAGCT
dm3 chr2L:20616568-20616769 + dme-mir-133 Known_mirbase CA---GCGCCCTAATGAA--------------------------ACTCGGCTCGATTTC--AC------------------CGC---------------------------------ATTCGA--GAATTTCCACCTGCAAC-ACTGTGTGTAGCTGGTTGACATCGGGTCAGATCTGT--TT--TTCAAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTGGTTGATGACAACGAAAGCCTAGTGAACTG--CGATGGAT-----------------------TACCATTTTCC-A----------------------------------------TGG-------------------------------------ACTAAA-A----GGTGAGCT
droEre2 scaffold_4845:3836552-3836752 - der-mir-133 Known_mirbase CA---GCTC----ATGAA--------------------------ACTCGGCCCAATCTG--GC------------------CAT---------------------------------T-------------TCCTCTGCAAC-GCTGTGTGTAGCTGGTTGACATCGGGTCAGATCTGT--TT--TCCTAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTGGTTGATGCCAACTAAATTCGAGTGAACTG--TGCACTGTGA----C--CTGT------GAACTGTGACCT--GT--GA-----------------------------------------------------------------------ACTGCAACAAAA-G----TGTGAGCT
droYak3 2R:6964766-6964977 + dya-mir-133 Known_mirbase TT----------ACTGAA--------------------------ACTCGGCTTAATTTC--GC------------------CAT---------------------------------ATTCCA--GAATTTCCTCCTGCAAC-GCTGTGTGTAGCTGGTTGACATCGGGTCAGATCTGT--TT-TTCCAAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTGGTTGATGACAACGAAGTACGAGTAAACTG--TGATAGACAGACTGAAAGCGT------AAATTACTATTTTTTC--AA-----------------------------------------------------------------------------ACAAAA-A----TGTGGGAT
droEug1 scf7180000409767:678602-678863 - CACAAGTGCACAAATGAA--------------------------ACTTTATTCAATTTT--GC------------------GAT---------------------------------TTTCCAGAAAATGATTATCTGCAAC-GCTGTGTGTAGCTGGTTGACATCGGGTCAGATCTACTTTT-TTCCAAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTGGTCGTTGACAACGAATTTCGAGTGAAACG--TGATAGATGGT---CAAACAT------AAATTGTGATTTTTA-ATAAAAAATAAAAAAACAAATGAAAAAAGAATAACAAACAATGGACAAA--------------------------------------------AGTTAATT
droBia1 scf7180000302422:7474987-7475246 - TA---GTGCACAATTGGA--------------------------GCCTGATTGAATTTC--GC------------------GAT---------------------------------GTTTAA---AATCATTACCTGCAAC-GCTGTGTGTAGCTGGTTGACATCGGGTCAGATCTAC--TT-TTTCAAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTGGTTGCTGACAGCGGAGTACGAGTGAACTG--TGATAAATGG----CAAACAT------ATAATATTATGCTTGC--GAAAACAAGAGCATCAAATGA-----------------------------AAATAGACA--CCCAGGACATTAACTCCACTAAGA-A----CATGAGCG
droTak1 scf7180000415104:189880-190129 - TA---GTGCACAAATGGA--------------------------ACCTGATTGAAATTC--GC------------------GAT---------------------------------ATTTAA--AAATGATTACCTGCAAC-GCTGTGTGTAGCTGGTTGACATCGGGTCAGATCTAC--TT-TTTCAAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTGGTTGATGACAACTCGACACTAGTGAACTG--TGATAGATGG----CAAACAT------ATATTAATATTATTAT--AAAA----ATGC---------------------AAACAATTGA------TAAATTGACA--C--AGAACATAAAATTCA------------CTTGAAAT
droEle1 scf7180000491186:607637-607811 + CA---GTGCACAAAAGAA--------------------------ACTTGATTCAATTTT--GT------------------GAT---------------------------------ATTAAAC-AAATTATTACCTGCAAC-GCTGTGTGTAGCTGGTTGACATCGGGTCAGATCTAT--TTTTTCAAAGTATTTGGTCCCCTTCAACCAGCTGTAGCCAGTGGTTGGTGACAACGAAATACGAGTGAACTG--TGATAGAT----------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000777920:26435-26706 + CA---GTGCACAAAAGAA--------------------------AACTGATTCAATTTT--AT------------------GAT---------------------------------ATTAAAC-AAATTATTATCTGCAAC-GCTGTGTGTAGCTGGTTGACATCGGGTCAGATCTAT--TTTTTCCAAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTGGTTGGTGACAACGAAATACGAGTGAACTG--TGATCGATGG----CAAACAC------AAATTATTATTTCTGT--GCAAAAAATAAT---------------------AAACAATAAACAAAAGTTAATTGGCA--CAAAGAACATAAATTTCACTAAAAAA----TGTAAGCG
droFic1 scf7180000453842:123917-124172 + CA---GTGCACAAACGAA--------------------------ACTTGATTCAATTCT--GC------------------GAT---------------------------------ATTCAA--AAATTATTATCTGCAAC-GCTGTGTGTAGCTGGTTGACATCGGGTCAGATCTGT--TTTTTCCAAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTGGTTGATGACAACGAAACCCGAGTGAACTG--TGATAGATGG----CAAACAT------AAATTATTATTTTTGT--AAAAAACAAAGC---------------------AAACAATGGAG-AAGATAAATTGACA--CACAGAGCATTTAC------------------TTAGCT
droKik1 scf7180000302408:807266-807549 + CAT-AGTGAACAAATGCA--------------------------ATTTGATTCAATTTT--GT------------------GAT---------------------------------ATTTAA--AATTTATTATCTGCAAC-GCTGTATGTAGCTGGTTGACATCGGGTCAGATCTAC--TGTTTCCAAGCATTTGGTCCCCTTCAACCAGCTGTAG-CAGTGGTTGATGACAACGAAATACGAGTGAACTGAGTGATAAATGA----CAAACAAAGCAAAAAAGTGCGATTT--GT--AAACACGAAAGC---------------------AAACAATGGTTAAAAATTAATTGACATACGCGGAACATTACCCGCACGAAAAAAAATCTTTAAGCG
droAna3 scaffold_12916:7117465-7117645 + dan-mir-133 Known_mirbase CA---GTGACA----GA----GA--AGCTGAACAAA-AAAGTGTATTTGATTTAATTTTTCGT------------------G--------------------------------------------AATGATTATCTGCAAC-GCTGTATGTAGCTGGTTGACATCGGGTCAGATCTAT--CT-TTTCAAGCATTTGGTCCCCTTCAACCAGCTGTAG-CAGTGGTTGATGACAACAAAGTACAAGTGAAAAG--TGATTTAT-----------------------T----------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396566:293404-293592 + CA---GTGACA----GAAACAGAAGAGCTGAACAAAAAAAGTGCATTTGATTTAATTTTTTGT------------------G--------------------------------------------AATGATTATCTGCAAC-GCTGTATGTAGCTGGTTGACATCGGGTCAGATCTAC--GTTTTTCAAGCATTTGGTCCCCTTCAACCAGCTGTAG-CAGTGGTTGATGACAACAAAGTACAAGTGAAAAG--TGATTTAT-----------------------T----------------------------------------------------------------------------------------------------------------
dp5 4_group3:7700004-7700159 - dps-mir-133 Known_mirbase CA---ATATTCA--------------------------------ATTTAATTCAATTCT--GT------------------G-TATT-----------------TGTATGTGACGCG-TG------TGTGCTTATGTACAACGGCTGTATGTAGCTGGTTGACATCGGGTCAGATCTAT--TT-TATCAAGTATTTGGTCCCCTTCAACCAGCTGTAT-CAGTGGTTGATTCCAACAAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_1:9145725-9145898 - dpe-mir-133 Known_mirbase CA---ATATTCA--------------------------------ATTTAATTCAATTCT--GTATCTGTGTATTTGTATGTG-TATT-----------------TGTATGTGACGCG-TG------TGTGCTTATGTACAACGGCTGTATGTAGCTGGTTGACATCGGGTCAGATCTAT--TT-TATCAAGTATTTGGTCCCCTTCAACCAGCTGTAT-CAGTGGTTGATTCCAACAAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004521:2027532-2027655 + dwi-mir-133 Known_mirbase GA---A--------------------------------------------------------------------------------------------------------------------------TTATT-TTTACAAC-ACTGAATGTAGCTGGTTGACATCGGGTCAGATCTAT--TTATTTGAAGCATTTGGTCCCCTTCAACCAGCTGTAG-CAGTGGTTGATCCCAACAAAAAGCAATGGAA-------------------------------------------------------------------------------------------------------------------------------------------------AATT
droVir3 scaffold_12963:13475793-13475969 - dvi-mir-133 Known_mirbase CA---ATGTTAAA-------------------------------ATTCAATTCAAATCA--ATTAATGTGCAAAATAATAAT-AATATGAACCAAACGAAGATA--TATATTGCCAA--TCG-----AATCACATTCACAAC-GCTGTGTGTAGTTGGTTGACATCGGGTCAGATCTAT--TT-CTGAAAGCATTTGGTCCCCTTCAACCAGCTGTAG-CAGTGGTTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6500:24707671-24707770 + dmo-mir-133 Known_mirbase CA------------------------------------------------------------------------------------------------------------------------------------TCCACAAC-GCTGTGTGTAGTTGGTTGACATCGGGTCAGATCTGT--TT--TTCGAGAATTTGGTCCCCTTCAACCAGCTGTAG-CAGTGGTTGATGACAACAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15126:6389780-6389967 + dgr-mir-133 Known_mirbase CA---ATATACA--------------------------------ATTCAATCCAATTCA--ATCAATATACAACTCAATAAC-ATTAACAAACAAACAAAACTATATACATGATTAA-TTTG------AATTTATTTACAAC-GCTGTATGTAGCTGGTTGACATCGGGTCAGATCTAT--TT-ATTCGAGTATTTGGTCCCCTTCAACCAGCTGTAG-CAGTGGTTGATGTCAACAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSec2
CA---GCGCCCTAATGAA--------------------------ACTCGGCTCGCTTTC--GC------------------CAC---------------------------------ATTCGA--G-ATTTGCACCTGCAAC-GCTGTGTGTAGCTGGTTGACATCGGGTCAGATCTGT--TT--TTTAAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTGGTTGCTGACATCGAAAGCCTAGCGAACTG--CGATGGAT-----------------------TATTATTTTCC-A--------------------------------------------------------------------------------------------GGTGAGCTSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGT.......................................................................................................................................................................................221109751.001097514807164701226676208
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTG........................................................................................................................................................................................2119396.00939627942851676150
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCT.........................................................................................................................................................................................2015839.005839357201245257
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTT......................................................................................................................................................................................2311477.00147743126501258
........................................................................................................................................................AGCTGGTTGACATCGGGTCAGAT................................................................................................................................................................................................................................2311363.00136319109635600
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAG...........................................................................................................................................................................................1811020.001020112663830
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGA.......................................................................................................................................................................................221574.0057412824476
........................................................................................................................................................AGCTGGTTGACATCGGGTCAGA.................................................................................................................................................................................................................................221456.00456014329113
...................................................................................................................................................................................................TGGTCCCCTTCAACCAGCTGT.......................................................................................................................................................................................211440.0044034481870
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTA......................................................................................................................................................................................231321.00321322312254
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGC.......................................................................................................................................................................................221209.0020973732133
...................................................................................................................................................................................................TGGTCCCCTTCAACCAGCTG........................................................................................................................................................................................201186.00186181005
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTT........................................................................................................................................................................................211186.001863990138
........................................................................................................................................................AGCTGGTTGACATCGGGTCAG..................................................................................................................................................................................................................................21185.0085131962
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTTT.....................................................................................................................................................................................24176.007623071
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTC......................................................................................................................................................................................23170.0070110356
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGG.......................................................................................................................................................................................22151.0051129228
....................................................................................................................................................................................................GGTCCCCTTCAACCAGCTGT.......................................................................................................................................................................................20147.0047108326
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGC..........................................................................................................................................................................................19135.0035190016
.....................................................................................................................................................................................................GTCCCCTTCAACCAGCTGT.......................................................................................................................................................................................19129.002962318
......................................................................................................................................................................................................TCCCCTTCAACCAGCTGT.......................................................................................................................................................................................18120.002010217
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTA........................................................................................................................................................................................21120.002012017
........................................................................................................................................................AGCTGGTTGACATCGGGTCA...................................................................................................................................................................................................................................20116.001604012
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTAT.....................................................................................................................................................................................24114.001410112
...................................................................................................................................................................................................TGGTCCCCTTCAACCAGCT.........................................................................................................................................................................................19113.001312001
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTAA.....................................................................................................................................................................................24111.00112009
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTC........................................................................................................................................................................................21110.00101009
.................................................................................................................................................................................................TTTGGTCCCCTTCAACCAGCTGT.......................................................................................................................................................................................2319.0098001
....................................................................................................................................................................................................GGTCCCCTTCAACCAGCTG........................................................................................................................................................................................1919.0098001
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGAT......................................................................................................................................................................................2319.0090126
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTTA.....................................................................................................................................................................................2418.0080008
...................................................................................................................................................................................................TGGTCCCCTTCAACCAGCTGTT......................................................................................................................................................................................2216.0066000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCA.........................................................................................................................................................................................2016.0060006
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCC.........................................................................................................................................................................................2015.0051004
.................................................................................................................................................................................................TTTGGTCCCCTTCAACCAGCTG........................................................................................................................................................................................2215.0054010
..........................................................................................................................................................CTGGTTGACATCGGGTCAGAT................................................................................................................................................................................................................................2114.0041111
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTTC.....................................................................................................................................................................................2414.0040004
...................................................................................................................................................................................................TGGTCCCCTTCAACCAGCTGG.......................................................................................................................................................................................2114.0044000
.....................................................................................................................................................................................................GTCCCCTTCAACCAGCTG........................................................................................................................................................................................1814.0043001
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCGT........................................................................................................................................................................................2113.0030003
....................................................................................................................................................................................................GGTCCCCTTCAACCAGCT.........................................................................................................................................................................................1813.0030003
........................................................................................................................................................AGCTGGTTGACATCGGGTCAGT.................................................................................................................................................................................................................................2213.0030012
........................................................................................................................................................AGCTGGTTGACATCGGGTCAGG.................................................................................................................................................................................................................................2212.0020110
...................................................................................................................................................................................................TGGTCCCCTTCAACCAGCTGTA......................................................................................................................................................................................2212.0021001
...................................................................................................................................................................................................TGGTCCCCTTCAACCAGCTT........................................................................................................................................................................................2012.0022000
........................................................................................................................................................AGCTGGTTGACATCGGGTC....................................................................................................................................................................................................................................1912.0020020
droSim2
CA---GCGTCCTAATGAA--------------------------ACTCGGCTCGATTTC--GC------------------CGC---------------------------------ATTCAA--AAATCTGCACCTGCAAC-GCTGTGTGTAGCTGGTTGACATCGGGTCAGATCTGT--TT--TTTAAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTGGTTGCTGACATCGAAAGCCGAGGGAACTG--CGATGGAT-----------------------TATTATTTTCC-A--------------------------------------------------------------------------------------------GGTGAGCTSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTG........................................................................................................................................................................................21131865.0031865284552379228372132500412094067000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGT.......................................................................................................................................................................................22127221.00272212162490412177412742622112412810199304000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAG...........................................................................................................................................................................................1816182.0061824100139603501000200000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGC.......................................................................................................................................................................................2214084.004084379910417810000000200000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGG.......................................................................................................................................................................................2213695.003695325016827100000000600000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGC..........................................................................................................................................................................................1913650.0036501251060139336901000000000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCT.........................................................................................................................................................................................2011100.001100230320402475107000907000
........................................................................................................................................................AGCTGGTTGACATCGGGTCAGAT................................................................................................................................................................................................................................231659.00659258121612030002022100000
........................................................................................................................................................AGCTGGTTGACATCGGGTCAGA.................................................................................................................................................................................................................................221467.00467106213602451001017400000
........................................................................................................................................................AGCTGGTTGACATCGGGTCAGATC...............................................................................................................................................................................................................................241144.001440000214200000000000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTT......................................................................................................................................................................................231128.001288520800112920900000
.....................................................................................................................................................................................................GTCCCCTTCAACCAGCTGT.......................................................................................................................................................................................19198.0098902600000000000000
........................................................................................................................................................AGCTGGTTGACATCGGGTCAG..................................................................................................................................................................................................................................21196.0096255110040000001500000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTA......................................................................................................................................................................................23196.00965322521105760300000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGA.......................................................................................................................................................................................22177.00771530200053100300000
...................................................................................................................................................................................................TGGTCCCCTTCAACCAGCTGT.......................................................................................................................................................................................21155.0055501400900000000000
.....................................................................................................................................................................................................GTCCCCTTCAACCAGCTG........................................................................................................................................................................................18144.0044421100000000000000
...................................................................................................................................................................................................TGGTCCCCTTCAACCAGCTG........................................................................................................................................................................................20143.00431310230600000000000
........................................................................................................................................................AGCTGGTTGACATCGGGTCAGG.................................................................................................................................................................................................................................22136.00361412000000000100000
........................................................................................................................................................AGCTGGTTGACATCGGGTCA...................................................................................................................................................................................................................................20132.0032802002200000000000
......................................................................................................................................................................................................TCCCCTTCAACCAGCTGT.......................................................................................................................................................................................18129.0029261200000000000000
........................................................................................................................................................AGCTGGTTGACATCGGGTC....................................................................................................................................................................................................................................19128.00281610001100000000000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCC.........................................................................................................................................................................................20127.0027234000000000000000
...................................................................................................................................................................................................TGGTCCCCTTCAACCAGC..........................................................................................................................................................................................18120.0020000002000000000000
........................................................................................................................................................AGCTGGTTGACATCGGGTCAGAC................................................................................................................................................................................................................................23118.0018160200000000000000
.....................................................................................................................................................................................................GTCCCCTTCAACCAGCTGG.......................................................................................................................................................................................19117.0017150200000000000000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTA........................................................................................................................................................................................21115.0015121020000000000000
........................................................................................................................................................AGCTGGTTGACATCGGGT.....................................................................................................................................................................................................................................18113.0013000001300000000000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTAC.......................................................................................................................................................................................22112.0012120000000000000000
.....................................................................................................................................................................................................GTCCCCTTCAACCAGCTGC.......................................................................................................................................................................................19112.0012120000000000000000
...................................................................................................................................................................................................TGGTCCCCTTCAACCAGCT.........................................................................................................................................................................................19111.001100030800000000000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCG.........................................................................................................................................................................................20111.001192000000000000000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGA..........................................................................................................................................................................................19110.001010000009000000000
....................................................................................................................................................................................................GGTCCCCTTCAACCAGCTGT.......................................................................................................................................................................................2018.00870010000000000000
......................................................................................................................................................................................................TCCCCTTCAACCAGCTGC.......................................................................................................................................................................................1817.00760100000000000000
.................................................................................................................................................................................................TTTGGTCCCCTTCAACCAGCTGT.......................................................................................................................................................................................2316.00610040100000000000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTC........................................................................................................................................................................................2116.00642000000000000000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTT........................................................................................................................................................................................2116.00620020001000001000
....................................................................................................................................................................................................GGTCCCCTTCAACCAGCTG........................................................................................................................................................................................1916.00630030000000000000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTAA.....................................................................................................................................................................................2415.00520010000200000000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTC......................................................................................................................................................................................2314.00440000000000000000
......................................................................................................................................................................................................TCCCCTTCAACCAGCTGG.......................................................................................................................................................................................1823.50770000000000000000
........................................................................................................................................................AGCTGGTTGACATCGGGTCAGT.................................................................................................................................................................................................................................2213.00330000000000000000
.................................................................................................................................................................................................TTTGGTCCCCTTCAACCAGCTG........................................................................................................................................................................................2213.00310010001000000000
...................................................................................................................................................................................................TGGTCCCCTTCAACCAGCTGC.......................................................................................................................................................................................2113.00321000000000000000
.....................................................................................................................................................................................................GTCCCCTTCAACCAGCTGTT......................................................................................................................................................................................2012.00220000000000000000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTTT.....................................................................................................................................................................................2412.00200010001000000000
........................................................................................................................................................AGCTGGTTGACATCGGGTCAGATA...............................................................................................................................................................................................................................2412.00220000000000000000
...................................................................................................................................................................................................TGGTCCCCTTCAACCAGCTGG.......................................................................................................................................................................................2112.00200020000000000000
........................................................................................................................................................AGCTGGTTGACATCGGGTCAGC.................................................................................................................................................................................................................................2212.00210000000000100000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGAC......................................................................................................................................................................................2312.00220000000000000000
.........................................................................................................................................................GCTGGTTGACATCGGGTCAGA.................................................................................................................................................................................................................................2112.00220000000000000000
....................................................................................................................................................................................................GGTCCCCTTCAACCAGCTGC.......................................................................................................................................................................................2012.00220000000000000000
.........................................................................................................................................................GCTGGTTGACATCGGGTCAGAT................................................................................................................................................................................................................................2211.00100000000000100000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTG......................................................................................................................................................................................2311.00100010000000000000
...................................................................................................................................................................................................TGGTCCCCTTCAACCAGCTGTT......................................................................................................................................................................................2211.00100000000100000000
.................................................................................................................................................................................................TTTGGTCCCCTTCAACCAGC..........................................................................................................................................................................................2011.00100000100000000000
dm3
CA---GCGCCCTAATGAA--------------------------ACTCGGCTCGATTTC--AC------------------CGC---------------------------------ATTCGA--GAATTTCCACCTGCAAC-ACTGTGTGTAGCTGGTTGACATCGGGTCAGATCTGT--TT--TTCAAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTGGTTGATGACAACGAAAGCCTAGTGAACTG--CGATGGAT-----------------------TACCATTTTCC-A----------------------------------------TGG-------------------------------------ACTAAA-A----GGTGAGCTSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGT.......................................................................................................................................................................................221596198.005961980000374300017252362561167200101660102317120169741555812622023101252219400022140001021400000000000000000191714616134732727143217111728558625950795581820463214417613941219141675163766151194603198410159100982073811009101770121555169177664701001572240000001200128800301017720000000011562291713011151460103542519927762271807944132603926998049539840032492378391210019136170000015421030000001334271651368730121131172023300001000447947384158315646359634934411108708256411004813700020201030110010611130937141920513062423409185853141879500348521863815220561132169062612845231561225186022018174013414154440287611929815871250078183800387410386141310
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTG........................................................................................................................................................................................21159534.0059534000015040003131020003010001300400455023071530670000000000000000000000229300000000000000000354055950630101101175463219791113405312384513505327111193410101531051595033431360186842392123480112310320000000000000000000010000000000000002048224501080921716177055250349851496478007005417403000030100000000000000000024561185137194270000110023300491352393221672846225624000001230000000000000100000000010010182645574116010184013080000206011018600000000500006006357074354613680623600000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCT.........................................................................................................................................................................................20125901.002590100002700000000041211200021020134151135100000000000000000000000622000000000000000001010148100010001113105259285301071257600403351300184512752220621015030123360278000000000000000000001000000000000000376745026231302147415934840475220000010361000000000000000100000000000204010000000000000003015911123200612744632154000002590000000000010000000000100300527166415777007104000073029560000101020000200868932246408550701702002
........................................................................................................................................................AGCTGGTTGACATCGGGTCAGAT................................................................................................................................................................................................................................23112111.00121110000800004121020000000010000029589100000000000100000000000111420000000000000000000105221600028935224109518125137223100341011401315072260131181589380390000000000232000000020000000000000001672490159101931143101119404031400000591100000000300000020000000000001611602040700000000163175092210023796033000008110000000001000021600011000130101280602375670391701176512120001273024023800006201850010540048169520310984204916400100
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTT......................................................................................................................................................................................2315602.0056020000620000000000040000000100000000000000000000000000000000000000000000000000100012000000000016001813100011030110031102006143670490903414461297173103000000000000000000000000000000000000178235013500153932110114802396000005721031000001000000000000000000101010130303000011001512027215600116416204000000760000000000000000001000000200271173172332011420101009903953000000006000010001166835112781500000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAG...........................................................................................................................................................................................1813243.003243000000000000000100000000000231811553070000000000000000000000000000000000000000000000810001000001100710000038100000000000001515011075171411032319000000000000000000000000000000000000162302452135781173114021400000260021000000000000000000000000000000000000000100023150118810021410601300001570000000000000000000000000001107619213805680000003401941000000014000020025124294122936301800000
........................................................................................................................................................AGCTGGTTGACATCGGGTCAGA.................................................................................................................................................................................................................................2213190.0031900000000002000000000000000000200000000000000000000000000000000000000000000000000000000000000502131111001900000000106002815070142100011000000000042100000000000000000000000131501100211007214036100000710010000100000000000000000000000020000000000000076101055000010190500000240000000000000000000000000102554845674126383018110000400363900000100300000130017544210103213147700000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGC.......................................................................................................................................................................................2212871.002871000051000500000000000000000000000000000000000000101000000000000000000000000000003500000000013701180100003530000100000050341105010841155447330000000000000000000000000000000000301491090104008814016034051100000050700100000000000000000000000000010001000000000000101604604001154401300000140000000000000000100001100200147112951590101650000001410327600000000800005006304293111232301000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGA.......................................................................................................................................................................................2211944.0019440000162000300000000200000000000000000000000000000000000000000000000000000000000004000000001006501201000117900100000000302230501632802212419000000000000000000000000000000000000475804801313013513705430000024600200002020000000000000000000010000000000007600310244000076003000001200000000000000000000000000008252571050261020000350213000000000100001002448266822400000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTA......................................................................................................................................................................................2311889.0018890000100000000000000000000000104631000000000000000000000000137400000000000000000000030000000001102021290000641101000100002149180140291248164364310000000000000000000000000000000000009499060007533046145070600000232000000000000000000000000000000004010100000027110022075900041444012000001700000000000000000000000000005850305701200000002005180000000000000200010971222200000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGG.......................................................................................................................................................................................2211615.00161500003000010000000100000000000000000000000000000000000000000000000000000000000000000000002000006010000110001000000001016406010250311115200000000000000000000000000000000000039470410061001311230150500000860000000000000000000000000000000000000000000000067033100011243060000021000000000000000000000000010218214810928059800010069053112000000001000000015820111700000
...................................................................................................................................................................................................TGGTCCCCTTCAACCAGCTGT.......................................................................................................................................................................................2111576.001576000000000000000000000000000214734800000000000000000000000000000000000000000000000020001000000400122500002200000000100001901401201210501604446200000000000000000000000000000000000011912109702995747811601900000020600100000000000000000000000000000200000200000000240316000021000000005000000000000000000000000000030181220032201000040330010000000001000145302131800000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGC..........................................................................................................................................................................................191888.0088800000000000000000000000000016192423030260000000000000000000000000000000000000000000000010000000003001001100119000100101000003000000001120210000000000000000000000000000000000001302472341434218300170000015000000000000000000000000000000005010001000000000000100000500000001000000000000000000000000000030260000000000100000000000000000000600000000000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTC......................................................................................................................................................................................231532.0053200003000000000100000000000000000000000000000000000000000000000000000000000000000100000000001003000000400000000000000620306160501512000000000000000000000000000000000000660200124070805100000390000000000000000000000000000000000000000000200011021500011190600000800000000000000000000000000003610152702510000001101012000000001000010041471801132100000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTT........................................................................................................................................................................................211518.0051800000000000000000000000000000000000000000000000000000000000000000000000000000000400000000002001000000500000000000000200000000411153400000000000000000000000000000000000094020043000205000000120000000000000000000000000000000000000000000000000010160001510803000005000000000000000000000000010083118000000000010110000000000000000018621000100000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGATC.....................................................................................................................................................................................241410.004100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000292118000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................TGGTCCCCTTCAACCAGCTG........................................................................................................................................................................................201286.002860000000000000000000000000000112318000000000000000000000000000000000000000000000000100000000000007100000400000000000000730301320121760000000000000000000000000000000000002228011001622128120400000036000000000000000000000000000000000000001000000000000300000401000001000000000000000000000000000010010000000000000000000000000000000200000000000
........................................................................................................................................................AGCTGGTTGACATCGGGTCAG..................................................................................................................................................................................................................................211284.0028400000000000000000000000000002000001000000000000000000000000000000000000000000000100000000000001000000000000000000000100101140000200000000000000000000000000000000000065060030043809110000090000000000000000000000000000000000000000000000012015100009030000011000000000000000000000000010019121027210100000006015000000000000000046261021200000
....................................................................................................................................................................................................GGTCCCCTTCAACCAGCTGT.......................................................................................................................................................................................201246.0024600000000000000000000000000001000000000001000000000000000000000000000000000000000000000000000000000000100000000000000200201110400000000000000000000000000000000000000054050042051201000000027000000000000000000000000000000000000000000000000100400002601000003000000000000000100300000000012148240270000000604110000000010000000134112221400000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTTT.....................................................................................................................................................................................241180.00180000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000030000009000000000000004201020603041000000000000000000000000000000000000860300630304060000002200000000010000000000000000000000000000000000000010050000121000000020000000000000000000000000000827900000000002001000000000000000002300000000000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTAA.....................................................................................................................................................................................241173.001730000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000200160100001700000000000000501004000120630000000000000000000000000000000000001622013004302040700000014100000000000000000000000000000002000000000000000001200001000000000000000000000000000000000000024000000000000000000000000000000000700000000000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTA........................................................................................................................................................................................211169.0016900001120000000000000000000000000000000000000000000000000000000000000000000000000031100000000100000100002200001100000001100000003012000000000000000000000000000000000000380400191604020000002400000000000000000000000000000000000000000001000000250000014020000110000000000000000000000000000003200100000000000000000000000000002830100000000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTC........................................................................................................................................................................................211146.0014600000000000000000010000000000000000000000000000000000000000000000000000000000000000000000003005000000120000000000000000000000512400000000000000000000000000000000000075050017005040300000052000000000000000000000000000000000000000000000000000100002800000001000000000000000000000000000010150000000000000000000000000000000500000000000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTAT.....................................................................................................................................................................................241128.0012800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000100000000000000500100020211300000000000000000000000000000000000024030011000601000000200000000000000000000000000000000000000000005417000000400000500000001000000000000000000000000000030210000000000000000000000000000000400000000000
.................................................................................................................................................................................................TTTGGTCCCCTTCAACCAGCTGT.......................................................................................................................................................................................23194.009400001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000100000000000000000000010000000000000000000000000000000000060500000010021010100000000280000000010000000006000012000000000010000000000000000000000000000001000000000000100000000000000010010000000001206800000000100000000110010000000
.....................................................................................................................................................................................................GTCCCCTTCAACCAGCTGT.......................................................................................................................................................................................19190.009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100900000000000000000000000100000000000000000000000000000000000000013010013060000000000500000000000000000000000000000000000000000000000310000000000000000000000000000000000000000000008571000100000000002000000001000010001420100300000
......................................................................................................................................................................................................TCCCCTTCAACCAGCTGT.......................................................................................................................................................................................18187.00870000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000001000050000000000000000000000060020000000000000001000000000000000000001103002204000100000010000000000000000001000000000000000000000000000001400100000000000000000000000000000000000000000052460000010000102700000000000000001800001100000
........................................................................................................................................................AGCTGGTTGACATCGGGTCA...................................................................................................................................................................................................................................20181.00810000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000100000000000000000000010000000000010000000000000000000000000000000000002000000000110310000090000000000000000000000000000000000000000000000000001000004000000000000000000000000000000000000454601000000000031000000000000000022710000100000
...................................................................................................................................................................................................TGGTCCCCTTCAACCAGCT.........................................................................................................................................................................................19164.00640000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000034000100040330000000000000000000000000000000000003505001003010100000021000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000010000000000000000000000000000000000300000000000
droEre2
CA---GCTC----ATGAA--------------------------ACTCGGCCCAATCTG--GC------------------CAT---------------------------------T-------------TCCTCTGCAAC-GCTGTGTGTAGCTGGTTGACATCGGGTCAGATCTGT--TT--TCCTAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTGGTTGATGCCAACTAAATTCGAGTGAACTG--TGCACTGTGA----C--CTGT------GAACTGTGACCT--GT--GA-----------------------------------------------------------------------ACTGCAACAAAA-G----TGTGAGCTSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGT.......................................................................................................................................................................................221177371.0017737115650617026894154331232958802
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTG........................................................................................................................................................................................21115317.0015317629447813578242766745
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCT.........................................................................................................................................................................................2014419.00441948874001125832550
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGC.......................................................................................................................................................................................2211870.001870151506994272190
........................................................................................................................................................AGCTGGTTGACATCGGGTCAGAT................................................................................................................................................................................................................................2311696.0016962729928815513050
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTT......................................................................................................................................................................................2311509.001509972431271209490
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAG...........................................................................................................................................................................................1811462.00146210149419611120
...................................................................................................................................................................................................TGGTCCCCTTCAACCAGCTGT.......................................................................................................................................................................................2111137.001137991327181070
........................................................................................................................................................AGCTGGTTGACATCGGGTCAGA.................................................................................................................................................................................................................................221603.006031153276264530
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTA......................................................................................................................................................................................231597.00597686792204175
...................................................................................................................................................................................................TGGTCCCCTTCAACCAGCTG........................................................................................................................................................................................201398.00398392110040
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGA.......................................................................................................................................................................................221166.0016688261221010
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTC......................................................................................................................................................................................231165.00165103230201090
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTT........................................................................................................................................................................................211159.00159867934500
....................................................................................................................................................................................................GGTCCCCTTCAACCAGCTGT.......................................................................................................................................................................................201107.00107442319480
........................................................................................................................................................AGCTGGTTGACATCGGGTCAG..................................................................................................................................................................................................................................21187.008710424760
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGG.......................................................................................................................................................................................22186.00861611458420
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTTT.....................................................................................................................................................................................24179.0079311005600
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGC..........................................................................................................................................................................................19139.0039211500030
.....................................................................................................................................................................................................GTCCCCTTCAACCAGCTGT.......................................................................................................................................................................................19139.003920503290
...................................................................................................................................................................................................TGGTCCCCTTCAACCAGCT.........................................................................................................................................................................................19133.003329010030
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTAT.....................................................................................................................................................................................24130.003010700220
.................................................................................................................................................................................................TTTGGTCCCCTTCAACCAGCTGT.......................................................................................................................................................................................23129.0029180000011
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTAA.....................................................................................................................................................................................24126.002650300180
.................................................................................................................................................................................................TTTGGTCCCCTTCAACCAGCTG........................................................................................................................................................................................22125.002580000116
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTG......................................................................................................................................................................................23123.002314010170
....................................................................................................................................................................................................GGTCCCCTTCAACCAGCTG........................................................................................................................................................................................19120.002020000000
........................................................................................................................................................AGCTGGTTGACATCGGGTCAGAC................................................................................................................................................................................................................................23117.001704001120
...................................................................................................................................................................................................TGGTCCCCTTCAACCAGCTGG.......................................................................................................................................................................................21116.001616000000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTC........................................................................................................................................................................................21114.00145130050
......................................................................................................................................................................................................TCCCCTTCAACCAGCTGT.......................................................................................................................................................................................18113.00131240060
........................................................................................................................................................AGCTGGTTGACATCGGGTCA...................................................................................................................................................................................................................................20113.001300102100
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTA........................................................................................................................................................................................21111.00117000040
........................................................................................................................................................AGCTGGTTGACATCGGGTCAGAA................................................................................................................................................................................................................................23111.001100000110
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTTA.....................................................................................................................................................................................24111.00110020090
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTGT.....................................................................................................................................................................................24111.001100100100
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAT...........................................................................................................................................................................................18110.001000000100
........................................................................................................................................................AGCTGGTTGACATCGGGTCAGAG................................................................................................................................................................................................................................2319.0090010080
...................................................................................................................................................................................................TGGTCCCCTTCAACCAGCTGTT......................................................................................................................................................................................2219.0098000010
.....................................................................................................................................................................................................GTCCCCTTCAACCAGCTG........................................................................................................................................................................................1818.0082000060
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTCT.....................................................................................................................................................................................2418.0082030030
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCC.........................................................................................................................................................................................2017.0071310020
................................................................................................................................................................................................ATTTGGTCCCCTTCAACCAGCT.........................................................................................................................................................................................2216.0060000006
...................................................................................................................................................................................................TGGTCCCCTTCAACCAGCTGTA......................................................................................................................................................................................2216.0066000000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTTC.....................................................................................................................................................................................2416.0061000140
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGTGT........................................................................................................................................................................................2125.00100000190
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCGT........................................................................................................................................................................................2115.0051000220
droYak3
TT----------ACTGAA--------------------------ACTCGGCTTAATTTC--GC------------------CAT---------------------------------ATTCCA--GAATTTCCTCCTGCAAC-GCTGTGTGTAGCTGGTTGACATCGGGTCAGATCTGT--TT-TTCCAAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTGGTTGATGACAACGAAGTACGAGTAAACTG--TGATAGACAGACTGAAAGCGT------AAATTACTATTTTTTC--AA-----------------------------------------------------------------------------ACAAAA-A----TGTGGGATSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGT.......................................................................................................................................................................................221131535.00131535694970821477712523798252500109930000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTG........................................................................................................................................................................................21112197.00121973844389289851144718881770000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGC.......................................................................................................................................................................................2216342.0063421347445462108304310000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCT.........................................................................................................................................................................................2012082.0020825030341660974900000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTT......................................................................................................................................................................................2311447.0014472372645535686620000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGG.......................................................................................................................................................................................2211330.00133011812323526540000
........................................................................................................................................................AGCTGGTTGACATCGGGTCAGAT................................................................................................................................................................................................................................231787.0078710626232114111173212020
...................................................................................................................................................................................................TGGTCCCCTTCAACCAGCTGT.......................................................................................................................................................................................211638.006382549130234380000
........................................................................................................................................................AGCTGGTTGACATCGGGTCAGA.................................................................................................................................................................................................................................221448.00448832186115124640000
...................................................................................................................................................................................................TGGTCCCCTTCAACCAGCTG........................................................................................................................................................................................201273.002730271000200000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAG...........................................................................................................................................................................................181270.00270100294128450000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTA......................................................................................................................................................................................231222.002221923131659560000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGA.......................................................................................................................................................................................221135.00135381615142140000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGC..........................................................................................................................................................................................191110.0011033333802400000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTC......................................................................................................................................................................................231101.001010650305370000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTTT.....................................................................................................................................................................................24158.00580420212920000
........................................................................................................................................................AGCTGGTTGACATCGGGTCAG..................................................................................................................................................................................................................................21157.005782316131500000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTT........................................................................................................................................................................................21157.005705100172410000
....................................................................................................................................................................................................GGTCCCCTTCAACCAGCTGT.......................................................................................................................................................................................20156.00560261141950000
........................................................................................................................................................AGCTGGTTGACATCGGGTCAGAC................................................................................................................................................................................................................................23132.0032402700100000
...................................................................................................................................................................................................TGGTCCCCTTCAACCAGCT.........................................................................................................................................................................................19130.0030030000000000
.....................................................................................................................................................................................................GTCCCCTTCAACCAGCTGT.......................................................................................................................................................................................19126.0026153002600000
....................................................................................................................................................................................................GGTCCCCTTCAACCAGCTG........................................................................................................................................................................................19125.0025025000000000
......................................................................................................................................................................................................TCCCCTTCAACCAGCTGT.......................................................................................................................................................................................18124.0024113100810000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTG......................................................................................................................................................................................23115.0015010003110000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTAC.......................................................................................................................................................................................22115.0015201200100000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTAA.....................................................................................................................................................................................24114.001416002500000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGCT......................................................................................................................................................................................23111.001100203600000
........................................................................................................................................................AGCTGGTTGACATCGGGTCA...................................................................................................................................................................................................................................20110.001010111600000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTC........................................................................................................................................................................................21110.001010400500000
.................................................................................................................................................................................................TTTGGTCCCCTTCAACCAGCTGT.......................................................................................................................................................................................23110.001007002100000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTTC.......................................................................................................................................................................................2228.501700702800000
........................................................................................................................................................AGCTGGTTGACATCGGGTCAGT.................................................................................................................................................................................................................................2218.00831001300000
droEug1
CACAAGTGCACAAATGAA--------------------------ACTTTATTCAATTTT--GC------------------GAT---------------------------------TTTCCAGAAAATGATTATCTGCAAC-GCTGTGTGTAGCTGGTTGACATCGGGTCAGATCTACTTTT-TTCCAAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTGGTCGTTGACAACGAATTTCGAGTGAAACG--TGATAGATGGT---CAAACAT------AAATTGTGATTTTTA-ATAAAAAATAAAAAAACAAATGAAAAAAGAATAACAAACAATGGACAAA--------------------------------------------AGTTAATTSizeHit CountTotal NormTotal
No Reads
droBia1
TA---GTGCACAATTGGA--------------------------GCCTGATTGAATTTC--GC------------------GAT---------------------------------GTTTAA---AATCATTACCTGCAAC-GCTGTGTGTAGCTGGTTGACATCGGGTCAGATCTAC--TT-TTTCAAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTGGTTGCTGACAGCGGAGTACGAGTGAACTG--TGATAAATGG----CAAACAT------ATAATATTATGCTTGC--GAAAACAAGAGCATCAAATGA-----------------------------AAATAGACA--CCCAGGACATTAACTCCACTAAGA-A----CATGAGCGSizeHit CountTotal NormTotal
No Reads
droTak1
TA---GTGCACAAATGGA--------------------------ACCTGATTGAAATTC--GC------------------GAT---------------------------------ATTTAA--AAATGATTACCTGCAAC-GCTGTGTGTAGCTGGTTGACATCGGGTCAGATCTAC--TT-TTTCAAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTGGTTGATGACAACTCGACACTAGTGAACTG--TGATAGATGG----CAAACAT------ATATTAATATTATTAT--AAAA----ATGC---------------------AAACAATTGA------TAAATTGACA--C--AGAACATAAAATTCA------------CTTGAAATSizeHit CountTotal NormTotal
No Reads
droEle1
CA---GTGCACAAAAGAA--------------------------ACTTGATTCAATTTT--GT------------------GAT---------------------------------ATTAAAC-AAATTATTACCTGCAAC-GCTGTGTGTAGCTGGTTGACATCGGGTCAGATCTAT--TTTTTCAAAGTATTTGGTCCCCTTCAACCAGCTGTAGCCAGTGGTTGGTGACAACGAAATACGAGTGAACTG--TGATAGAT----------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
CA---GTGCACAAAAGAA--------------------------AACTGATTCAATTTT--AT------------------GAT---------------------------------ATTAAAC-AAATTATTATCTGCAAC-GCTGTGTGTAGCTGGTTGACATCGGGTCAGATCTAT--TTTTTCCAAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTGGTTGGTGACAACGAAATACGAGTGAACTG--TGATCGATGG----CAAACAC------AAATTATTATTTCTGT--GCAAAAAATAAT---------------------AAACAATAAACAAAAGTTAATTGGCA--CAAAGAACATAAATTTCACTAAAAAA----TGTAAGCGSizeHit CountTotal NormTotal
No Reads
droFic1
CA---GTGCACAAACGAA--------------------------ACTTGATTCAATTCT--GC------------------GAT---------------------------------ATTCAA--AAATTATTATCTGCAAC-GCTGTGTGTAGCTGGTTGACATCGGGTCAGATCTGT--TTTTTCCAAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTGGTTGATGACAACGAAACCCGAGTGAACTG--TGATAGATGG----CAAACAT------AAATTATTATTTTTGT--AAAAAACAAAGC---------------------AAACAATGGAG-AAGATAAATTGACA--CACAGAGCATTTAC------------------TTAGCTSizeHit CountTotal NormTotal
No Reads
droKik1
CAT-AGTGAACAAATGCA--------------------------ATTTGATTCAATTTT--GT------------------GAT---------------------------------ATTTAA--AATTTATTATCTGCAAC-GCTGTATGTAGCTGGTTGACATCGGGTCAGATCTAC--TGTTTCCAAGCATTTGGTCCCCTTCAACCAGCTGTAG-CAGTGGTTGATGACAACGAAATACGAGTGAACTGAGTGATAAATGA----CAAACAAAGCAAAAAAGTGCGATTT--GT--AAACACGAAAGC---------------------AAACAATGGTTAAAAATTAATTGACATACGCGGAACATTACCCGCACGAAAAAAAATCTTTAAGCGSizeHit CountTotal NormTotal
No Reads
droAna3
CA---GTGACA----GA----GA--AGCTGAACAAA-AAAGTGTATTTGATTTAATTTTTCGT------------------G--------------------------------------------AATGATTATCTGCAAC-GCTGTATGTAGCTGGTTGACATCGGGTCAGATCTAT--CT-TTTCAAGCATTTGGTCCCCTTCAACCAGCTGTAG-CAGTGGTTGATGACAACAAAGTACAAGTGAAAAG--TGATTTAT-----------------------T----------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGT.......................................................................................................................................................................................22178640.007864060203123271372951030821623
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTG........................................................................................................................................................................................2117499.00749931321492221032031890
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCT.........................................................................................................................................................................................2015193.0051932867125862602053
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTT......................................................................................................................................................................................2311768.00176811317183684717
........................................................................................................................................................AGCTGGTTGACATCGGGTCAGAT................................................................................................................................................................................................................................2311446.00144627221763241293
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGC.......................................................................................................................................................................................2211414.0014145106413071126
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAG...........................................................................................................................................................................................181483.0048300016285236
...................................................................................................................................................................................................TGGTCCCCTTCAACCAGCTGT.......................................................................................................................................................................................211470.00470432722027
........................................................................................................................................................AGCTGGTTGACATCGGGTCAGA.................................................................................................................................................................................................................................221380.0038011191783322
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGA.......................................................................................................................................................................................221189.00189147076983
...................................................................................................................................................................................................TGGTCCCCTTCAACCAGCTG........................................................................................................................................................................................201182.0018218000101
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTA......................................................................................................................................................................................231173.00173383175650
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTTT-....................................................................................................................................................................................241135.00135141065352
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGG.......................................................................................................................................................................................221115.00115212179111
........................................................................................................................................................AGCTGGTTGACATCGGGTCAG..................................................................................................................................................................................................................................211111.0011120052102
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTT........................................................................................................................................................................................211105.0010562049543
....................................................................................................................................................................................................GGTCCCCTTCAACCAGCTGT.......................................................................................................................................................................................20148.0048220013310
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGC..........................................................................................................................................................................................19146.004610230508
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTC......................................................................................................................................................................................23141.00415302337
........................................................................................................................................................AGCTGGTTGACATCGGGTCA...................................................................................................................................................................................................................................20138.00382002133
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTA........................................................................................................................................................................................21137.00370008326
.....................................................................................................................................................................................................GTCCCCTTCAACCAGCTGT.......................................................................................................................................................................................19120.00202103113
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTC........................................................................................................................................................................................21116.0016100735
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTTA-....................................................................................................................................................................................24115.0015100608
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTG......................................................................................................................................................................................23114.00141200200
...................................................................................................................................................................................................TGGTCCCCTTCAACCAGCT.........................................................................................................................................................................................19114.00141100300
......................................................................................................................................................................................................TCCCCTTCAACCAGCTGT.......................................................................................................................................................................................18112.0012510312
.................................................................................................................................................................................................TTTGGTCCCCTTCAACCAGCTGT.......................................................................................................................................................................................23110.0010900001
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTTT-T...................................................................................................................................................................................2519.009000216
...................................................................................................................................................................................................TGGTCCCCTTCAACCAGCTGTT......................................................................................................................................................................................2219.009600201
....................................................................................................................................................................................................GGTCCCCTTCAACCAGCTG........................................................................................................................................................................................1917.007600001
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCC.........................................................................................................................................................................................2017.007010501
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTGT-....................................................................................................................................................................................2417.007000115
........................................................................................................................................................AGCTGGTTGACATCGGGTCAGATT...............................................................................................................................................................................................................................2416.006010005
droBip1
CA---GTGACA----GAAACAGAAGAGCTGAACAAAAAAAGTGCATTTGATTTAATTTTTTGT------------------G--------------------------------------------AATGATTATCTGCAAC-GCTGTATGTAGCTGGTTGACATCGGGTCAGATCTAC--GTTTTTCAAGCATTTGGTCCCCTTCAACCAGCTGTAG-CAGTGGTTGATGACAACAAAGTACAAGTGAAAAG--TGATTTAT-----------------------T----------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dp5
CA---ATATTCA--------------------------------ATTTAATTCAATTCT--GT------------------G-TATT-----------------TGTATGTGACGCG-TG------TGTGCTTATGTACAACGGCTGTATGTAGCTGGTTGACATCGGGTCAGATCTAT--TT-TATCAAGTATTTGGTCCCCTTCAACCAGCTGTAT-CAGTGGTTGATTCCAACAAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGT.......................................................................................................................................................................................221171914.001719141917041104439393338114054860850133
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTG........................................................................................................................................................................................21150293.0050293679244697376762182289100002
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGC.......................................................................................................................................................................................22123186.002318609296819980142105000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTT......................................................................................................................................................................................2313950.00395004404526252373482001
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCT.........................................................................................................................................................................................2013712.0037120869721751359652000
...................................................................................................................................................................................................TGGTCCCCTTCAACCAGCTGT.......................................................................................................................................................................................2111624.00162401198934012578000
...................................................................................................................................................................................................TGGTCCCCTTCAACCAGCTG........................................................................................................................................................................................201737.007370663074000000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTA......................................................................................................................................................................................231372.00372080132384343000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGC..........................................................................................................................................................................................191359.0035905018290010000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTT........................................................................................................................................................................................211338.00338014112872213000
........................................................................................................................................................AGCTGGTTGACATCGGGTCAGAT................................................................................................................................................................................................................................231337.0033705556101504025001
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCC.........................................................................................................................................................................................201314.00314011310020000
........................................................................................................................................................AGCTGGTTGACATCGGGTCAGA.................................................................................................................................................................................................................................221232.00232174051481313005
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGA.......................................................................................................................................................................................221231.00231016101452508000
....................................................................................................................................................................................................GGTCCCCTTCAACCAGCTGT.......................................................................................................................................................................................201211.002110650136181000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAG...........................................................................................................................................................................................181201.002010100914150000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTC......................................................................................................................................................................................231199.001990631612207000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGG.......................................................................................................................................................................................22196.00962742710460000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTAC.......................................................................................................................................................................................22162.0062001250000000
...................................................................................................................................................................................................TGGTCCCCTTCAACCAGCT.........................................................................................................................................................................................19158.005805305000000
....................................................................................................................................................................................................GGTCCCCTTCAACCAGCTG........................................................................................................................................................................................19158.0058039018010000
...................................................................................................................................................................................................TGGTCCCCTTCAACCAGCTGC.......................................................................................................................................................................................21156.005600451010000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTC........................................................................................................................................................................................21151.005101642020000
...................................................................................................................................................................................................TGGTCCCCTTCAACCAGCTGTT......................................................................................................................................................................................22143.004303508000000
.................................................................................................................................................................................................TTTGGTCCCCTTCAACCAGCTGT.......................................................................................................................................................................................23140.0040025112010010
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTG......................................................................................................................................................................................23131.0031013115020000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTTC.......................................................................................................................................................................................22129.002900222050000
........................................................................................................................................................AGCTGGTTGACATCGGGTCAG..................................................................................................................................................................................................................................21124.002406201231000
....................................................................................................................................................................................................GGTCCCCTTCAACCAGCTGC.......................................................................................................................................................................................20123.002300121010000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTA........................................................................................................................................................................................21122.002200021010000
.................................................................................................................................................................................................TTTGGTCCCCTTCAACCAGCTG........................................................................................................................................................................................22119.001901602010000
.....................................................................................................................................................................................................GTCCCCTTCAACCAGCTGT.......................................................................................................................................................................................19118.00180809010000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTAA-....................................................................................................................................................................................24117.001706011000000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGCT......................................................................................................................................................................................23116.001600130120000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTTC-....................................................................................................................................................................................24116.001601015000000
......................................................................................................................................................................................................TCCCCTTCAACCAGCTGT.......................................................................................................................................................................................18113.00130603031000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTCC.......................................................................................................................................................................................22111.00110019010000
droPer2
CA---ATATTCA--------------------------------ATTTAATTCAATTCT--GTATCTGTGTATTTGTATGTG-TATT-----------------TGTATGTGACGCG-TG------TGTGCTTATGTACAACGGCTGTATGTAGCTGGTTGACATCGGGTCAGATCTAT--TT-TATCAAGTATTTGGTCCCCTTCAACCAGCTGTAT-CAGTGGTTGATTCCAACAAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGT.......................................................................................................................................................................................221119711.001197113782311104033932800671983
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTG........................................................................................................................................................................................2115011.005011961237781695187728
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTT......................................................................................................................................................................................2312596.0025960446695182427
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCT.........................................................................................................................................................................................2011215.001215193843566711
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGC.......................................................................................................................................................................................221946.0094625451977150
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAG...........................................................................................................................................................................................181372.0037200415819020
........................................................................................................................................................AGCTGGTTGACATCGGGTCAGAT................................................................................................................................................................................................................................231344.00344112104825518
...................................................................................................................................................................................................TGGTCCCCTTCAACCAGCTGT.......................................................................................................................................................................................211277.002770173134663
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGA.......................................................................................................................................................................................221258.00258081691791
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGG.......................................................................................................................................................................................221210.0021067152231030
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTA......................................................................................................................................................................................231172.001720130511080
........................................................................................................................................................AGCTGGTTGACATCGGGTCAGA.................................................................................................................................................................................................................................221107.001072611618424
...................................................................................................................................................................................................TGGTCCCCTTCAACCAGCTG........................................................................................................................................................................................20189.00890870110
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTC......................................................................................................................................................................................23178.007800010680
....................................................................................................................................................................................................GGTCCCCTTCAACCAGCTGT.......................................................................................................................................................................................20170.007026019430
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTT........................................................................................................................................................................................21124.00240008151
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGCT......................................................................................................................................................................................23124.00240004200
........................................................................................................................................................AGCTGGTTGACATCGGGTCAG..................................................................................................................................................................................................................................21118.00182004111
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGC..........................................................................................................................................................................................19117.0017060470
.....................................................................................................................................................................................................GTCCCCTTCAACCAGCTGT.......................................................................................................................................................................................19113.0013000481
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTCC.......................................................................................................................................................................................22112.00120001110
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTC........................................................................................................................................................................................21112.0012010290
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTTC.......................................................................................................................................................................................22111.00110001100
......................................................................................................................................................................................................TCCCCTTCAACCAGCTGT.......................................................................................................................................................................................18111.0011000380
....................................................................................................................................................................................................GGTCCCCTTCAACCAGCTG........................................................................................................................................................................................19110.0010090010
droWil2
GA---A--------------------------------------------------------------------------------------------------------------------------TTATT-TTTACAAC-ACTGAATGTAGCTGGTTGACATCGGGTCAGATCTAT--TTATTTGAAGCATTTGGTCCCCTTCAACCAGCTGTAG-CAGTGGTTGATCCCAACAAAAAGCAATGGAA-------------------------------------------------------------------------------------------------------------------------------------------------AATTSizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGT.......................................................................................................................................................................................22188980.008898020802610064922224433342
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTG........................................................................................................................................................................................21122830.00228301656425511034093203
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCT.........................................................................................................................................................................................2017488.0074881924401081116637
........................................................................................................................................................AGCTGGTTGACATCGGGTCAGAT................................................................................................................................................................................................................................2314337.004337317355627041225
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGC.......................................................................................................................................................................................2212863.00286327254103886
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGG.......................................................................................................................................................................................2212737.00273727216136
........................................................................................................................................................AGCTGGTTGACATCGGGTCAGA.................................................................................................................................................................................................................................2212350.002350175781688472
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAG...........................................................................................................................................................................................181868.008680049206613
...................................................................................................................................................................................................TGGTCCCCTTCAACCAGCTGT.......................................................................................................................................................................................211490.004901440491647
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTT......................................................................................................................................................................................231282.0028232241051165
........................................................................................................................................................AGCTGGTTGACATCGGGTCAG..................................................................................................................................................................................................................................211279.00279191178180
...................................................................................................................................................................................................TGGTCCCCTTCAACCAGCTG........................................................................................................................................................................................201163.001634154005
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTA......................................................................................................................................................................................231121.00121292221850
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGC..........................................................................................................................................................................................191112.0011210010101
.....................................................................................................................................................................................................GTCCCCTTCAACCAGCTGT.......................................................................................................................................................................................191104.001048530115
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTT........................................................................................................................................................................................21184.0084162570
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGA.......................................................................................................................................................................................22183.0083965459
....................................................................................................................................................................................................GGTCCCCTTCAACCAGCTGT.......................................................................................................................................................................................20141.0041620276
...................................................................................................................................................................................................TGGTCCCCTTCAACCAGCT.........................................................................................................................................................................................19138.0038031007
......................................................................................................................................................................................................TCCCCTTCAACCAGCTGT.......................................................................................................................................................................................18137.0037304111
........................................................................................................................................................AGCTGGTTGACATCGGGTCA...................................................................................................................................................................................................................................20128.0028130519
.....................................................................................................................................................................................................GTCCCCTTCAACCAGCTG........................................................................................................................................................................................18126.0026242000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCC.........................................................................................................................................................................................20123.0023140009
........................................................................................................................................................AGCTGGTTGACATCGGGTCAGG.................................................................................................................................................................................................................................22120.0020200000
.....................................................................................................................................................................................................GTCCCCTTCAACCAGCTGC.......................................................................................................................................................................................19119.0019190000
....................................................................................................................................................................................................GGTCCCCTTCAACCAGCTG........................................................................................................................................................................................19118.0018510003
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTA........................................................................................................................................................................................21116.0016510010
.....................................................................................................................................................................................................GTCCCCTTCAACCAGCTGG.......................................................................................................................................................................................19113.0013130000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTTT-....................................................................................................................................................................................24113.0013020110
.................................................................................................................................................................................................TTTGGTCCCCTTCAACCAGCTG........................................................................................................................................................................................22110.001026020
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTC........................................................................................................................................................................................21110.001040006
.................................................................................................................................................................................................TTTGGTCCCCTTCAACCAGCTGT.......................................................................................................................................................................................23110.001004132
........................................................................................................................................................AGCTGGTTGACATCGGGTCAGATA...............................................................................................................................................................................................................................2418.00810052
........................................................................................................................................................AGCTGGTTGACATCGGGTCAGAC................................................................................................................................................................................................................................2316.00650010
.........................................................................................................................................................GCTGGTTGACATCGGGTCAGAT................................................................................................................................................................................................................................2216.00602022
......................................................................................................................................................................................................TCCCCTTCAACCAGCTGC.......................................................................................................................................................................................1815.00550000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTAA-....................................................................................................................................................................................2415.00522010
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCG.........................................................................................................................................................................................2015.00530002
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTC......................................................................................................................................................................................2315.00521002
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAA...........................................................................................................................................................................................1814.00400004
........................................................................................................................................................AGCTGGTTGACATCGGGT.....................................................................................................................................................................................................................................1814.00400022
........................................................................................................................................................AGCTGGTTGACATCGGGTCAGT.................................................................................................................................................................................................................................2214.00411011
........................................................................................................................................................AGCTGGTTGACATCGGGTC....................................................................................................................................................................................................................................1914.00430010
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCGT........................................................................................................................................................................................2114.00400013
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTG......................................................................................................................................................................................2314.00404000
........................................................................................................................................................AGCTGGTTGACATCGGGTCAGATT...............................................................................................................................................................................................................................2414.00400031
droVir3
CA---ATGTTAAA-------------------------------ATTCAATTCAAATCA--ATTAATGTGCAAAATAATAAT-AATATGAACCAAACGAAGATA--TATATTGCCAA--TCG-----AATCACATTCACAAC-GCTGTGTGTAGTTGGTTGACATCGGGTCAGATCTAT--TT-CTGAAAGCATTTGGTCCCCTTCAACCAGCTGTAG-CAGTGGTTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGT.......................................................................................................................................................................................221102659.001026593053427657681101104222034512273691928856627804439593412976982710178142831925132921516354128131100000001011113525138510621203151190310113112493064418312531248788110128
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTG........................................................................................................................................................................................21120955.002095595231806257514000000000015589783576969855401162710640000134041300120002000000000010015239441712911130011319543710041225233115
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCT.........................................................................................................................................................................................2014737.00473744292590000000000263175130192333150047321800000100104020000000000000000000001201169210700010002000000000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGC.......................................................................................................................................................................................2212652.00265234567318260000000000207414450151000000000000000000000000000000000000010124700100100000000000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTT......................................................................................................................................................................................2312401.002401319181105000000000027415585182190960327304000001010010000100000000000000000000143579800200102000000002
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGG.......................................................................................................................................................................................221839.00839626967100000000006136610470000000000000000000000000000000000002191700000000010000000
...................................................................................................................................................................................................TGGTCCCCTTCAACCAGCTGT.......................................................................................................................................................................................211606.0060630539600000000008405300125000000001000000000000000000000000000114400010000000000000
...................................................................................................................................................................................................TGGTCCCCTTCAACCAGCTG........................................................................................................................................................................................201497.00497004940000000000000111000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................AGTTGGTTGACATCGGGTCAGAT................................................................................................................................................................................................................................231334.00334918714011000000033211335111002028000000100010000000000000000000000001021661100000003000000000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTA......................................................................................................................................................................................231254.00254072960000000000312211101512015190100000000001110000000000000000000000254000672040010134106
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAG...........................................................................................................................................................................................181197.00197001000000000001878161311125220000000000000000100000000000000000005244500000000000000000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGC..........................................................................................................................................................................................191148.00148012758000000000033443404200000000000000000000000000000000002407000012003030001102
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTTT-....................................................................................................................................................................................241146.0014600190000000000017125104701724000000001000000000000000000000000000025300200000000000000
........................................................................................................................................................AGTTGGTTGACATCGGGTCAGA.................................................................................................................................................................................................................................221106.001060611200000000004423120210000000000000000100100000000000000093613700000001000000000
...................................................................................................................................................................................................TGGTCCCCTTCAACCAGCT.........................................................................................................................................................................................19178.007800770000000000000100000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................GGTCCCCTTCAACCAGCTGT.......................................................................................................................................................................................20175.007501356000000000060046305300000000000000000000000000000000000006000000000000000000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTC......................................................................................................................................................................................23162.006200412010000000041245113100000110303000000000000000000000000037500000000000000000
.....................................................................................................................................................................................................GTCCCCTTCAACCAGCTGT.......................................................................................................................................................................................19152.005211661000000000040241503400000000000000000000000000000000000003200000000000000000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGA.......................................................................................................................................................................................22152.005200290000000000620130024000000000000000000000000000000000000018500000000000000000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTT........................................................................................................................................................................................21143.004300610000000000025324100000000000000000000000000000000000000017200000000000000000
....................................................................................................................................................................................................GGTCCCCTTCAACCAGCTG........................................................................................................................................................................................19141.004101371000000000000001000100000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTG......................................................................................................................................................................................23133.003300212000000000031110001100000000000000000000000000000000000001000000000000000001
......................................................................................................................................................................................................TCCCCTTCAACCAGCTGT.......................................................................................................................................................................................18133.00332740000001000022411101200000000000000000000000000000000000003100000010000000000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTAA-....................................................................................................................................................................................24132.00320030000000000011101001300000000000001100000000000000000000003001030100000040223
.................................................................................................................................................................................................TTTGGTCCCCTTCAACCAGCTGT.......................................................................................................................................................................................23126.002600161000000000001010000200000010000000000000000000000000001002000000000000000001
...................................................................................................................................................................................................TGGTCCCCTTCAACCAGCTGTT......................................................................................................................................................................................22124.002400230000000000000000000000000000000000000000000000000000000000100000000000000000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTA........................................................................................................................................................................................21117.00170810000000000002000102100000000000000000000000000000000000001100000000000000000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTTA-....................................................................................................................................................................................24114.00140010000000000010040003100000000110000000000000000000000000002000000000000000000
.................................................................................................................................................................................................TTTGGTCCCCTTCAACCAGCTG........................................................................................................................................................................................22114.001400130000000000000000000100000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTC........................................................................................................................................................................................21114.00140002000000000000120102000000000000000000000000000000000000006000000000000000000
.....................................................................................................................................................................................................GTCCCCTTCAACCAGCTG........................................................................................................................................................................................18113.00130390000000000000010000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................ATTTGGTCCCCTTCAACCAGCTGT.......................................................................................................................................................................................24111.00110081000000000000010001000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................AGTTGGTTGACATCGGGTCAG..................................................................................................................................................................................................................................21111.00110200000000000010102000000000000000000000000000000000000000004100000000000000000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGGT......................................................................................................................................................................................2319.0090000000000000042100002000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTTC-....................................................................................................................................................................................2418.0080002000000000000011020000000000001000000000000000000000000001000000000000000000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTAA-A...................................................................................................................................................................................2518.0080000000000000000000000001010000010000000000000000000000000000000011000000000201
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCC.........................................................................................................................................................................................2018.0081400000000000000000000000000000000000000000000000000000000003000000000000000000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCG.........................................................................................................................................................................................2018.0080300000000000000000000000000000000000000000000000000000000004000000001000000000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTTA-A...................................................................................................................................................................................2517.0070000000000000010000000100000000000000000000000000000000000000000011000000010002
....................................................................................................................................................................................................GGTCCCCTTCAACCAGCT.........................................................................................................................................................................................1816.0060050000000000000000000000000000000000000000000000000000000001000000000000000000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTGT-....................................................................................................................................................................................2416.0060010000000000000010000100000000000000000000000000000000000002100000000000000000
...................................................................................................................................................................................................TGGTCCCCTTCAACCAGCTGTA......................................................................................................................................................................................2215.0050040000000000010000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGCT......................................................................................................................................................................................2315.0050000000000000000001000200000000000000000000000000000000000110000000000000000000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTCT-....................................................................................................................................................................................2414.0040000000000000000010011000000000000000001000000000000000000000000000000000000000
........................................................................................................................................................AGTTGGTTGACATCGGGTCAGAC................................................................................................................................................................................................................................2314.0040202000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTCC.......................................................................................................................................................................................2214.0040000000000000000000010000000000000000000000000000000000000003000000000000000000
droMoj3
CA------------------------------------------------------------------------------------------------------------------------------------TCCACAAC-GCTGTGTGTAGTTGGTTGACATCGGGTCAGATCTGT--TT--TTCGAGAATTTGGTCCCCTTCAACCAGCTGTAG-CAGTGGTTGATGACAACAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGT.......................................................................................................................................................................................221135967.0013596718377728446065326790389951
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTG........................................................................................................................................................................................21111059.00110598109911191355334133
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTT......................................................................................................................................................................................2314298.00429846571616197290148
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCT.........................................................................................................................................................................................2013409.0034091117098011695138
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGC.......................................................................................................................................................................................2212980.00298011413628125399
...................................................................................................................................................................................................TGGTCCCCTTCAACCAGCTGT.......................................................................................................................................................................................2111538.001538144923039162
...................................................................................................................................................................................................TGGTCCCCTTCAACCAGCTG........................................................................................................................................................................................201646.0064664500100
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTTT-....................................................................................................................................................................................241468.0046853218721817
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAG...........................................................................................................................................................................................181467.0046751178213070
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTA......................................................................................................................................................................................231268.002685639410078
........................................................................................................................................................AGTTGGTTGACATCGGGTCAGAT................................................................................................................................................................................................................................231222.00222131747695917
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGA.......................................................................................................................................................................................221181.001811007080147
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGC..........................................................................................................................................................................................191144.001441000113300
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGG.......................................................................................................................................................................................221123.00123111604551
....................................................................................................................................................................................................GGTCCCCTTCAACCAGCTGT.......................................................................................................................................................................................201110.00110600232214
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTT........................................................................................................................................................................................21189.0089240242993
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTC......................................................................................................................................................................................23177.0077302826146
...................................................................................................................................................................................................TGGTCCCCTTCAACCAGCT.........................................................................................................................................................................................19177.00777501100
........................................................................................................................................................AGTTGGTTGACATCGGGTCAGA.................................................................................................................................................................................................................................22172.0072122918175
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTTA-....................................................................................................................................................................................24147.004760202010
...................................................................................................................................................................................................TGGTCCCCTTCAACCAGCTGTT......................................................................................................................................................................................22137.00373500110
....................................................................................................................................................................................................GGTCCCCTTCAACCAGCTG........................................................................................................................................................................................19134.00343400000
.................................................................................................................................................................................................TTTGGTCCCCTTCAACCAGCTGT.......................................................................................................................................................................................23133.00333200010
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGCT......................................................................................................................................................................................23132.003200171500
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTG......................................................................................................................................................................................23130.00302404200
.....................................................................................................................................................................................................GTCCCCTTCAACCAGCTGT.......................................................................................................................................................................................19128.00286041422
........................................................................................................................................................AGTTGGTTGACATCGGGTCAG..................................................................................................................................................................................................................................21123.00231061411
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTGT-....................................................................................................................................................................................24122.00220091300
.................................................................................................................................................................................................TTTGGTCCCCTTCAACCAGCTG........................................................................................................................................................................................22121.00212100000
........................................................................................................................................................AGTTGGTTGACATCGGGTCA...................................................................................................................................................................................................................................20119.0019303805
......................................................................................................................................................................................................TCCCCTTCAACCAGCTGT.......................................................................................................................................................................................18119.0019905500
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTTT-T...................................................................................................................................................................................25115.00151031100
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTAA-....................................................................................................................................................................................24115.0015606300
........................................................................................................................................................AGTTGGTTGACATCGGGTCAGAC................................................................................................................................................................................................................................23114.00140100130
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGGT......................................................................................................................................................................................23111.0011009200
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTAT-....................................................................................................................................................................................24110.0010204400
...................................................................................................................................................................................................TGGTCCCCTTCAACCAGC..........................................................................................................................................................................................18110.00101000000
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTCC.......................................................................................................................................................................................2218.008002420
.....................................................................................................................................................................................................GTCCCCTTCAACCAGCTG........................................................................................................................................................................................1818.008700100
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTC........................................................................................................................................................................................2118.008202220
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTA........................................................................................................................................................................................2118.008303200
...................................................................................................................................................................................................TGGTCCCCTTCAACCAGCTGTTT-....................................................................................................................................................................................2317.007700000
droGri2
CA---ATATACA--------------------------------ATTCAATCCAATTCA--ATCAATATACAACTCAATAAC-ATTAACAAACAAACAAAACTATATACATGATTAA-TTTG------AATTTATTTACAAC-GCTGTATGTAGCTGGTTGACATCGGGTCAGATCTAT--TT-ATTCGAGTATTTGGTCCCCTTCAACCAGCTGTAG-CAGTGGTTGATGTCAACAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGT.......................................................................................................................................................................................2213133.00313317851348
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTG........................................................................................................................................................................................211400.0040038614
...................................................................................................................................................................................................TGGTCCCCTTCAACCAGCTGT.......................................................................................................................................................................................211144.001441440
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTT......................................................................................................................................................................................23146.0046379
...................................................................................................................................................................................................TGGTCCCCTTCAACCAGCTG........................................................................................................................................................................................20137.0037370
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCT.........................................................................................................................................................................................20136.0036333
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGC..........................................................................................................................................................................................19112.0012120
....................................................................................................................................................................................................GGTCCCCTTCAACCAGCTGT.......................................................................................................................................................................................20111.0011110
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAG...........................................................................................................................................................................................18111.0011011
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGC.......................................................................................................................................................................................2217.00725
........................................................................................................................................................AGCTGGTTGACATCGGGTCAGAT................................................................................................................................................................................................................................2316.00633
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTA......................................................................................................................................................................................2316.00651
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTG......................................................................................................................................................................................2315.00550
....................................................................................................................................................................................................GGTCCCCTTCAACCAGCTG........................................................................................................................................................................................1915.00550
.................................................................................................................................................................................................TTTGGTCCCCTTCAACCAGCTGT.......................................................................................................................................................................................2314.00440
......................................................................................................................................................................................................TCCCCTTCAACCAGCTGT.......................................................................................................................................................................................1814.00440
.....................................................................................................................................................................................................GTCCCCTTCAACCAGCTGT.......................................................................................................................................................................................1913.00330
.................................................................................................................................................................................................TTTGGTCCCCTTCAACCAGCTG........................................................................................................................................................................................2213.00330
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTC......................................................................................................................................................................................2313.00321
...................................................................................................................................................................................................TGGTCCCCTTCAACCAGCTGTT......................................................................................................................................................................................2212.00220
........................................................................................................................................................AGCTGGTTGACATCGGGTCAGA.................................................................................................................................................................................................................................2212.00202
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTTT-....................................................................................................................................................................................2412.00220
...................................................................................................................................................................................................TGGTCCCCTTCAACCAGCT.........................................................................................................................................................................................1912.00220
...................................................................................................................................................................................................TGGTCCCCTTCAACCAGCTGTA......................................................................................................................................................................................2211.00110
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTTA-....................................................................................................................................................................................2411.00110
................................................................................................................................................................................................ATTTGGTCCCCTTCAACCAGCTGT.......................................................................................................................................................................................2411.00110
.................................................................................................................................................................................................TTTGGTCCCCTTCAACCAGC..........................................................................................................................................................................................2011.00110
...................................................................................................................................................................................................TGGTCCCCTTCAACCAGC..........................................................................................................................................................................................1811.00110
................................................................................................................................................................................................ATTTGGTCCCCTTCAACCAGCTG........................................................................................................................................................................................2311.00110
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGA.......................................................................................................................................................................................2211.00110
...................................................................................................................................................................................................TGGTCCCCTTCAACCAGCTGTTA-....................................................................................................................................................................................2311.00110
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGG.......................................................................................................................................................................................2211.00101
..................................................................................................................................................................................................TTGGTCCCCTTCAACCAGCTGTAG-....................................................................................................................................................................................2411.00110
................................................................................................................................................................................TAT--TT-ATTCGAGTATTTGGT........................................................................................................................................................................................................2011.00101

Generated: 10/20/2015 at 07:37 PM