ID:

dse-mir-124

 Coordinate:

scaffold_7:1207328-1207408 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

5pUTR

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

utr5 [utr5_plus_2319]; pre_miRNA [Dsec\mir-124-RM]; miRNA [Dsec\miR-124-RA]

No Repeatable elements found

Sense Strand Reads

AGCTTCGTCGTTATGCAATGAGTAAAGCCCAAGTGTCCTTCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAATTACTCATACCCAATGATAGACAGAAATAATAGACAAATT

*************************************************...(((((..(((.((((((.((((((..((((.((((.........))))))))..)))))).)))))).))).))))).....*********************************************** 		Read size # Mismatch Hit Count Total Norm Total V115

head

 V114

embryo

 V113

male body		 M054

female body
..................................................................................................TAAGGCACGCGGTGAATGCCA.............................................................. 21 0 1 99797.00 99797 68823 27424 2162 1388
..................................................................................................TAAGGCACGCGGTGAATGCC............................................................... 20 0 1 44949.00 44949 42103 1264 1282 300
..................................................................................................TAAGGCACGCGGTGAATGC................................................................ 19 0 1 19485.00 19485 19113 108 206 58
..................................................................................................TAAGGCACGCGGTGAATGCCAA............................................................. 22 0 1 11729.00 11729 2549 8959 106 115
..................................................................................................TAAGGCACGCGGTGAATGCCAAG............................................................ 23 0 1 5283.00 5283 2735 2296 122 130
..................................................................................................TAAGGCACGCGGTGAATGCCT.............................................................. 21 1 1 1002.00 1002 960 9 19 14
..................................................................................................TAAGGCACGCGGTGAATGCCAAA............................................................ 23 1 1 463.00 463 211 237 6 9
................................................................GGTATCCACTGTAGGCCTATATG.............................................................................................. 23 0 1 461.00 461 46 399 3 13
..................................................................................................TAAGGCACGCGGTGAATG................................................................. 18 0 1 380.00 380 367 3 2 8
..................................................................................................TAATGCACGCGGTGAATGCCA.............................................................. 21 1 1 296.00 296 256 33 6 1
..................................................................................................TAAGGCACGCGGTGAATGCCAAGA........................................................... 24 0 1 291.00 291 232 42 13 4
...................................................................................................AAGGCACGCGGTGAATGCCA.............................................................. 20 0 1 283.00 283 111 33 3 136
..................................................................................................TAGGGCACGCGGTGAATGCCA.............................................................. 21 1 1 245.00 245 201 37 6 1
..................................................................................................TAAGGCACGTGGTGAATGCCA.............................................................. 21 1 1 244.00 244 78 164 2 0
..................................................................................................TAAGGTACGCGGTGAATGCCA.............................................................. 21 1 1 243.00 243 27 213 2 1
..................................................................................................TAAGGCACGCGGCGAATGCCA.............................................................. 21 1 1 230.00 230 151 71 7 1
..................................................................................................TAAGGCACGCGGTGAATGCCAAGT........................................................... 24 1 1 225.00 225 164 53 6 2
..................................................................................................TAACGCACGCGGTGAATGCCA.............................................................. 21 1 1 212.00 212 201 10 1 0
...............................................................TGGTATCCACTGTAGGCCTATATG.............................................................................................. 24 0 1 212.00 212 71 133 4 4
..................................................................................................TAAGGCACGCGGTGAATGCA............................................................... 20 1 1 196.00 196 185 5 5 1
..................................................................................................TAGGGCACGCGGTGAATGCC............................................................... 20 1 1 191.00 191 184 3 4 0
..................................................................................................TAAGTCACGCGGTGAATGCCA.............................................................. 21 1 1 190.00 190 148 29 3 10
..................................................................................................TAAGGCACACGGTGAATGCCA.............................................................. 21 1 1 161.00 161 115 40 2 4
..................................................................................................TAAGCCACGCGGTGAATGCCA.............................................................. 21 1 1 160.00 160 107 41 2 10
..................................................................................................TAAGGCACGCGGTGAATTCCA.............................................................. 21 1 1 157.00 157 131 21 1 4
..................................................................................................TAAGGCACGCGGTGAGTGCCA.............................................................. 21 1 1 149.00 149 96 49 3 1
..................................................................................................TAAGGCACGCGGTGAATCCCA.............................................................. 21 1 1 146.00 146 95 46 4 1
..................................................................................................TAAGGCACGCGGTGAATGCCAAT............................................................ 23 1 1 135.00 135 83 48 1 3
..................................................................................................TAAGGCACGCGGTGAATGCCG.............................................................. 21 1 1 134.00 134 91 37 3 3
..................................................................................................TAAGGCACGCGGTGAATGCCC.............................................................. 21 1 1 133.00 133 92 40 1 0
..................................................................................................TAAGGTACGCGGTGAATGCCAA............................................................. 22 1 1 132.00 132 5 127 0 0
.................................................................................................CTAAGGCACGCGGTGAATGCCA.............................................................. 22 1 1 130.00 130 86 41 1 2
..................................................................................................TAAGGCACGCGGTGAATGTCA.............................................................. 21 1 1 129.00 129 57 55 15 2
..................................................................................................TAAGGCACGCGGTGAATGCAA.............................................................. 21 1 1 123.00 123 104 19 0 0
..................................................................................................TAAGGCATGCGGTGAATGCCA.............................................................. 21 1 1 118.00 118 70 47 0 1
..................................................................................................TAAGGCACGCGGTGAATGACA.............................................................. 21 1 1 117.00 117 96 4 16 1
..................................................................................................TAAGGAACGCGGTGAATGCCA.............................................................. 21 1 1 116.00 116 109 7 0 0
..................................................................................................TAAGGCACGCGGTGAATGCCAT............................................................. 22 1 1 114.00 114 99 5 1 9
..................................................................................................TAAGGCACGCGGTGAATGT................................................................ 19 1 1 111.00 111 102 0 9 0
..................................................................................................TAAGGCACGAGGTGAATGCCA.............................................................. 21 1 1 110.00 110 86 21 3 0
..................................................................................................TAAGGCAAGCGGTGAATGCCA.............................................................. 21 1 1 109.00 109 97 8 0 4
..................................................................................................CAAGGCACGCGGTGAATGCCA.............................................................. 21 1 1 105.00 105 69 33 2 1
..................................................................................................TAAGGCACTCGGTGAATGCCA.............................................................. 21 1 1 95.00 95 82 12 1 0
..................................................................................................TAAGGCACGCGGTGAATACCA.............................................................. 21 1 1 93.00 93 71 19 2 1
..................................................................................................TAAGGCGCGCGGTGAATGCCA.............................................................. 21 1 1 93.00 93 50 41 0 2
..................................................................................................TAAGGCACGCGGCGAATGCC............................................................... 20 1 1 88.00 88 77 3 8 0
..................................................................................................TAAGGCACGCGGTGCATGCCA.............................................................. 21 1 1 88.00 88 56 28 4 0
...................................................................................................AAGGCACGCGGTGAATGCC............................................................... 19 0 1 88.00 88 68 0 0 20
..................................................................................................TAAGGCACGCGGTGACTGCCA.............................................................. 21 1 1 87.00 87 52 35 0 0
..................................................................................................TAAGGCACGCAGTGAATGCCA.............................................................. 21 1 1 83.00 83 59 24 0 0
..................................................................................................TAAGGCACGCGGGGAATGCCA.............................................................. 21 1 1 80.00 80 50 25 2 3
..................................................................................................TAAGGCACACGGTGAATGCC............................................................... 20 1 1 78.00 78 75 1 0 2
..................................................................................................TAAGGCACGCTGTGAATGCCA.............................................................. 21 1 1 77.00 77 67 7 2 1
..................................................................................................TAAGGCACGCGGTAAATGCCA.............................................................. 21 1 1 76.00 76 48 25 1 2
..................................................................................................TAAGGCACGCGGTGAACGCCA.............................................................. 21 1 1 76.00 76 42 33 1 0
..................................................................................................TAAGGCACGCGGTGAATGCTA.............................................................. 21 1 1 76.00 76 34 39 0 3
..................................................................................................TAATGCACGCGGTGAATGCC............................................................... 20 1 1 72.00 72 69 1 2 0
..................................................................................................TAAAGCACGCGGTGAATGCCA.............................................................. 21 1 1 71.00 71 55 14 1 1
..................................................................................................TGAGGCACGCGGTGAATGCCA.............................................................. 21 1 1 70.00 70 37 31 2 0
..................................................................................................TAAGTCACGCGGTGAATGCC............................................................... 20 1 1 68.00 68 61 0 3 4
..................................................................................................TAAGGCACGCGGTGAATGAC............................................................... 20 1 1 68.00 68 55 0 13 0
.................................................................................................CTAAGGCACGCGGTGAATGCC............................................................... 21 1 1 68.00 68 65 1 0 2
..................................................................................................TAAGGCAAGCGGTGAATGCC............................................................... 20 1 1 67.00 67 66 0 0 1
..................................................................................................TAAGGCACTCGGTGAATGCC............................................................... 20 1 1 67.00 67 64 1 0 2
..................................................................................................AAAGGCACGCGGTGAATGCCA.............................................................. 21 1 1 66.00 66 49 9 2 6
..................................................................................................TAAGGCACGCGGTGAATCCA............................................................... 20 2 1 66.00 66 52 14 0 0
..................................................................................................TAAGGCACGCGGTGAATGA................................................................ 19 1 1 65.00 65 58 0 6 1
..................................................................................................TAAGGCACGCGGTTAATGCCA.............................................................. 21 1 1 62.00 62 55 5 0 2
..................................................................................................TAAGGCACGAGGTGAATGCC............................................................... 20 1 1 61.00 61 59 2 0 0
..................................................................................................TAAGGAACGCGGTGAATGCC............................................................... 20 1 1 60.00 60 58 1 1 0
..................................................................................................TAAGGCACGCGGTGGATGCCA.............................................................. 21 1 1 58.00 58 35 22 1 0
..................................................................................................TAAGGCACCCGGTGAATGCCA.............................................................. 21 1 1 56.00 56 37 18 0 1
..................................................................................................TAAGGCACGCGGTGAATCCC............................................................... 20 1 1 55.00 55 49 2 4 0
..................................................................................................TACGGCACGCGGTGAATGCCA.............................................................. 21 1 1 55.00 55 36 17 2 0
................................................................GGTATCCACTGTAGGCCTATA................................................................................................ 21 0 1 55.00 55 24 31 0 0
..................................................................................................TAAGGCACGTGGTGAATGCC............................................................... 20 1 1 55.00 55 42 13 0 0
..................................................................................................TAAGGCACGCGGTGAATGCT............................................................... 20 1 1 54.00 54 51 0 2 1
..................................................................................................TAAGGCACGCGGTGAATTCC............................................................... 20 1 1 52.00 52 50 0 2 0
..................................................................................................TAAGGCACGCGGTCAATGCCA.............................................................. 21 1 1 51.00 51 34 16 1 0
..................................................................................................TCAGGCACGCGGTGAATGCCA.............................................................. 21 1 1 49.00 49 28 21 0 0
..................................................................................................TAGGGCACGCGGTGAATGC................................................................ 19 1 1 48.00 48 46 0 2 0
..................................................................................................TAAGACACGCGGTGAATGCCA.............................................................. 21 1 1 48.00 48 40 7 0 1
..................................................................................................TAAGGCACGCGGTAAATGCC............................................................... 20 1 1 46.00 46 40 2 2 2
..................................................................................................TAAGGCACGCTGTGAATGCC............................................................... 20 1 1 46.00 46 44 0 2 0
..................................................................................................TAAGGCACGCCGTGAATGCCA.............................................................. 21 1 1 46.00 46 30 13 1 2
...................................................................................................TAAGCACGCGGTGAATGCCA.............................................................. 20 2 2 45.50 91 82 5 3 1
..................................................................................................GAAGGCACGCGGTGAATGCCA.............................................................. 21 1 1 45.00 45 41 4 0 0
....................................................................................................AGGCACGCGGTGAATGCCA.............................................................. 19 0 1 45.00 45 25 11 0 9
..................................................................................................TAAGGCACGCGATGAATGCCA.............................................................. 21 1 1 45.00 45 28 16 1 0
..................................................................................................TAAGGCACGCGGCGAATGC................................................................ 19 1 1 45.00 45 42 2 1 0
..................................................................................................TAAGGCACGCGCTGAATGCCA.............................................................. 21 1 1 44.00 44 26 17 0 1
..................................................................................................TAAAGCACGCGGTGAATGCC............................................................... 20 1 1 44.00 44 42 1 0 1
..................................................................................................TAAGGCACGCGGTGAATACC............................................................... 20 1 1 43.00 43 42 0 0 1
..................................................................................................TAAGGCACGCGGTGAGTGCC............................................................... 20 1 1 42.00 42 39 2 0 1
..................................................................................................TAAGGCACGCGGTGAATGTC............................................................... 20 1 1 42.00 42 31 4 7 0
..................................................................................................TAAGGCACGCGGTGACTGCC............................................................... 20 1 1 42.00 42 39 2 1 0
..................................................................................................TAAGGCCCGCGGTGAATGCCA.............................................................. 21 1 1 41.00 41 25 6 0 10
..................................................................................................TAAGGCACGCGTTGAATGCCA.............................................................. 21 1 1 40.00 40 28 10 0 2
..................................................................................................TAAGCCACGCGGTGAATGCC............................................................... 20 1 1 39.00 39 32 2 1 4
..................................................................................................CAAGGCACGCGGTGAATGCC............................................................... 20 1 1 38.00 38 33 3 2 0
...................................................................................................AAGGCACGCGGTGAATGCCAAG............................................................ 22 0 1 36.00 36 16 12 0 8
..................................................................................................TAAGGCGCGCGGTGAATGCC............................................................... 20 1 1 36.00 36 34 1 1 0
..................................................................................................TAAGGCACGCAGTGAATGCC............................................................... 20 1 1 36.00 36 34 1 1 0
..................................................................................................TAAGGCACGCGGTGAACGCC............................................................... 20 1 1 36.00 36 31 2 3 0
..................................................................................................TAACGCACGCGGTGAATGCC............................................................... 20 1 1 36.00 36 35 0 0 1
..................................................................................................TAAGGAACGCGGTGAATGC................................................................ 19 1 1 36.00 36 36 0 0 0
...................................................................................................TATGCACGCGGTGAATGCCA.............................................................. 20 2 2 35.50 71 61 8 0 2
...................................................................................................AAGGCACGCGGTGAATGC................................................................ 18 0 1 34.00 34 28 0 0 6
..................................................................................................TAAGACACGCGGTGAATGCC............................................................... 20 1 1 34.00 34 30 0 3 1
..................................................................................................TAAGGCACACGGTGAATGC................................................................ 19 1 1 34.00 34 34 0 0 0
..................................................................................................TAAGGCATGCGGTGAATGCC............................................................... 20 1 1 34.00 34 32 2 0 0
..................................................................................................TAAGGCTCGCGGTGAATGCCA.............................................................. 21 1 1 34.00 34 10 24 0 0
..................................................................................................TAAGGCACGCGGTGCATGCC............................................................... 20 1 1 34.00 34 33 0 1 0
..................................................................................................TAAGGCACGCGGTGAATGCCATT............................................................ 23 2 1 33.00 33 29 0 3 1
....................................................................................................AGGCACGCGGTGAATGCCAAG............................................................ 21 0 1 32.00 32 25 5 0 2
..................................................................................................TAAGGTACGCGGTGAATGCC............................................................... 20 1 1 32.00 32 20 11 1 0
..................................................................................................TAAGGCACGTGGTGAATGCCAA............................................................. 22 1 1 32.00 32 3 29 0 0
..................................................................................................TAAGGCACGCGGTGAATGGCA.............................................................. 21 1 1 31.00 31 11 7 10 3
..................................................................................................TAAGGCACGCGGAGAATGCCA.............................................................. 21 1 1 31.00 31 11 18 2 0
..................................................................................................TAAGGCACGCGTTGAATGCC............................................................... 20 1 1 31.00 31 29 1 1 0
..................................................................................................TAAGGCAGGCGGTGAATGCCA.............................................................. 21 1 1 30.00 30 15 14 0 1
..................................................................................................TAAGGCACGCGGTAAATGC................................................................ 19 1 1 29.00 29 28 0 0 1
..................................................................................................TAAGGCACGCGGTTAATGCC............................................................... 20 1 1 29.00 29 29 0 0 0
...............................................................TGGTATCCACTGTAGGCCTATA................................................................................................ 22 0 1 29.00 29 14 14 1 0
..................................................................................................TGAGGCACGCGGTGAATGCC............................................................... 20 1 1 29.00 29 28 1 0 0
..................................................................................................TAAGGCACGCGGTGACTGC................................................................ 19 1 1 29.00 29 28 0 1 0
..................................................................................................TAAGGCACGCGGTGAATGCCAC............................................................. 22 1 1 28.00 28 19 8 0 1
..................................................................................................TAAGGCACCCGGTGAATGCC............................................................... 20 1 1 28.00 28 25 1 1 1
..................................................................................................TAAGGCACGAGGTGAATGC................................................................ 19 1 1 27.00 27 27 0 0 0
..................................................................................................TAAGGCACGCGGTGAATGCCAAC............................................................ 23 1 1 27.00 27 11 15 0 1
..................................................................................................TAAGGCACGCGGTCAATGCC............................................................... 20 1 1 26.00 26 26 0 0 0
..................................................................................................TAAGGCACGCGGTGGATGCC............................................................... 20 1 1 26.00 26 26 0 0 0
..................................................................................................TAAGGCACTCGGTGAATGC................................................................ 19 1 1 26.00 26 26 0 0 0
..................................................................................................TAAGGCACGTGGTGAATGCCAAG............................................................ 23 1 1 25.00 25 4 21 0 0
..................................................................................................TAAGGCAAGCGGTGAATGC................................................................ 19 1 1 25.00 25 25 0 0 0
..................................................................................................TAAGGCATGCGGTGAATGC................................................................ 19 1 1 25.00 25 25 0 0 0
..................................................................................................TAAGCCACGCGGTGAATGCCAA............................................................. 22 1 1 25.00 25 1 23 0 1
..................................................................................................TAAGGCATGCGGTGAATGCCAA............................................................. 22 1 1 25.00 25 1 23 1 0
..................................................................................................TAAGGCACGCGATGAATGCC............................................................... 20 1 1 24.00 24 22 0 1 1
..................................................................................................AAAGGCACGCGGTGAATGCC............................................................... 20 1 1 24.00 24 24 0 0 0
...................................................................................................AAGGCACGCGGTGAATGCCAA............................................................. 21 0 1 24.00 24 5 5 0 14
..................................................................................................TAAGGCACGCGGTGAATGCCAAAA........................................................... 24 1 1 24.00 24 13 11 0 0
..................................................................................................TAAGGCACGCCGTGAATGCC............................................................... 20 1 1 23.00 23 22 1 0 0
..................................................................................................TAAGGCACGTGGTGAATGC................................................................ 19 1 1 23.00 23 23 0 0 0
..................................................................................................TAAGGCACGCGGTGATTGCCA.............................................................. 21 1 1 22.00 22 2 17 0 3
..................................................................................................TAAGGCCCGCGGTGAATGCC............................................................... 20 1 1 22.00 22 19 0 1 2
..................................................................................................TAAGGCACGCTGTGAATGC................................................................ 19 1 1 22.00 22 22 0 0 0
..................................................................................................TAAGGCACGCGGTGAATCC................................................................ 19 1 1 21.00 21 20 0 1 0
..................................................................................................TAAGGCACGCGCTGAATGCC............................................................... 20 1 1 21.00 21 20 1 0 0
..................................................................................................TAAGGCACACGGTGAATGCCAA............................................................. 22 1 1 21.00 21 5 15 0 1
.................................................................................................CTAAGGCACGCGGTGAATGC................................................................ 20 1 1 21.00 21 21 0 0 0
..................................................................................................TAAGGCACGCGGCGAATGCCAA............................................................. 22 1 1 21.00 21 3 18 0 0
....................................................................................................AGGCACGCGGTGAATGCC............................................................... 18 0 1 20.00 20 20 0 0 0
..................................................................................................TCAGGCACGCGGTGAATGCC............................................................... 20 1 1 20.00 20 19 1 0 0
..................................................................................................TAAGGCACGCGGTGAATTC................................................................ 19 1 1 20.00 20 20 0 0 0
..................................................................................................TACGGCACGCGGTGAATGCC............................................................... 20 1 1 20.00 20 20 0 0 0
..................................................................................................TAAGGCACGCGGTGAATT................................................................. 18 1 1 20.00 20 20 0 0 0
...................................................................................................TAGGCACGCGGTGAATGCCA.............................................................. 20 1 1 20.00 20 6 12 1 1
................................................................GGTATCCACTGTAGGCCTATAT............................................................................................... 22 0 1 19.00 19 3 15 0 1
..................................................................................................TAAGGCACGCGGTGAATGCCAG............................................................. 22 1 1 19.00 19 9 9 1 0
....................................................................................................AGGCACGCGGTGAATGCCAAGT........................................................... 22 1 1 19.00 19 14 5 0 0
..................................................................................................TAAGTCACGCGGTGAATGC................................................................ 19 1 1 19.00 19 19 0 0 0
..................................................................................................TAAGGCACGCGGTGAATGTCAA............................................................. 22 1 1 19.00 19 0 18 1 0
..................................................................................................AAAGGCACGCGGTGAATGC................................................................ 19 1 1 18.00 18 18 0 0 0
..................................................................................................TAAGGCACGCGGTAAATGCCAA............................................................. 22 1 1 18.00 18 7 11 0 0
..................................................................................................TAAGGCACGCGGGGAATGCC............................................................... 20 1 1 18.00 18 15 2 1 0
..................................................................................................TAAGCCACGCGGTGAATGC................................................................ 19 1 1 18.00 18 18 0 0 0
..................................................................................................TAATGCACGCGGTGAATGC................................................................ 19 1 1 18.00 18 18 0 0 0
..................................................................................................TAAGGCACGAGGTGAATGCCAA............................................................. 22 1 1 17.00 17 8 9 0 0
..................................................................................................TAAGGCACGCGGTGAGTGC................................................................ 19 1 1 17.00 17 17 0 0 0
..................................................................................................TAAGGCACGCGGTTAATGC................................................................ 19 1 1 17.00 17 17 0 0 0
..................................................................................................TAATGCACGCGGTGAATGCCAA............................................................. 22 1 1 17.00 17 10 7 0 0
..................................................................................................GAAGGCACGCGGTGAATGCC............................................................... 20 1 1 17.00 17 17 0 0 0
..................................................................................................TAAGGCACGCGGTGAATCCCAA............................................................. 22 1 1 16.00 16 6 10 0 0
..................................................................................................TAAGGCACGCGGTGAACGCCAA............................................................. 22 1 1 16.00 16 1 14 1 0
..................................................................................................TAAGTCACGCGGTGAATGCCAA............................................................. 22 1 1 16.00 16 2 14 0 0
..................................................................................................TAAGGCACGCGGTGAAAGCCA.............................................................. 21 1 1 16.00 16 7 9 0 0
..................................................................................................TAAGGCACGCGTTGAATGC................................................................ 19 1 1 16.00 16 15 0 0 1
..................................................................................................TAAAGCACGCGGTGAATGC................................................................ 19 1 1 16.00 16 16 0 0 0
..................................................................................................TAAGGCACGCGGTCAATGC................................................................ 19 1 1 16.00 16 16 0 0 0
...............................................................TGGTATCCACTGTAGGCCTATAT............................................................................................... 23 0 1 15.00 15 7 8 0 0
..................................................................................................TAAGGCACGCGGTGAATGTCAAG............................................................ 23 1 1 15.00 15 3 10 2 0
..................................................................................................TAAGGCACGCGGTGGATGCCAA............................................................. 22 1 1 15.00 15 1 14 0 0
..................................................................................................TAAGGCACGCGGTGCATGC................................................................ 19 1 1 15.00 15 15 0 0 0
..................................................................................................TAAGGCACGCGGTGAATAC................................................................ 19 1 1 15.00 15 14 0 1 0
..................................................................................................TAGGGCACGCGGTGAATGCCAA............................................................. 22 1 1 15.00 15 6 9 0 0
..................................................................................................TAAGGCACGCGGTGAATGCCAAGC........................................................... 24 1 1 15.00 15 12 3 0 0
..................................................................................................TAAGGCACCCGGTGAATGC................................................................ 19 1 1 15.00 15 15 0 0 0
..................................................................................................TAAGGCTCGCGGTGAATGCCAA............................................................. 22 1 1 14.00 14 0 14 0 0
..................................................................................................TAAGGCACGCGGTGAATGCTAA............................................................. 22 1 1 14.00 14 1 13 0 0
..................................................................................................TAAGGCACGCGGTGAGTGCCAA............................................................. 22 1 1 14.00 14 2 12 0 0
..................................................................................................TAAGGCACGCCGTGAATGC................................................................ 19 1 1 14.00 14 13 0 1 0
..................................................................................................TAAGGCACACGGTGAATGCCAAG............................................................ 23 1 1 14.00 14 7 7 0 0
..................................................................................................TAACGCACGCGGTGAATGC................................................................ 19 1 1 13.00 13 13 0 0 0
..................................................................................................TAAGGCACGCGGTGTATGCCA.............................................................. 21 1 1 13.00 13 6 7 0 0
..................................................................................................TGAGGCACGCGGTGAATGC................................................................ 19 1 1 13.00 13 13 0 0 0
..................................................................................................TAAGGCACGCGGTGCATGCCAA............................................................. 22 1 1 13.00 13 3 10 0 0
..................................................................................................TAAGGCACGCGATGAATGC................................................................ 19 1 1 12.00 12 10 0 2 0
..................................................................................................TAAGGCACGGGGTGAATGCCA.............................................................. 21 1 1 12.00 12 7 5 0 0
..................................................................................................TAAGGCACCCGGTGAATGCCAA............................................................. 22 1 1 12.00 12 2 9 0 1
..................................................................................................TTAGGCACGCGGTGAATGCCA.............................................................. 21 1 1 12.00 12 3 8 0 1
..................................................................................................TAAGGCACGCAGTGAATGC................................................................ 19 1 1 12.00 12 12 0 0 0
..................................................................................................TAAGGCACGCGGTGAATGCCGA............................................................. 22 1 1 12.00 12 3 9 0 0
..................................................................................................TATGGCACGCGGTGAATGCCA.............................................................. 21 1 1 12.00 12 4 8 0 0
..................................................................................................TAAGGCACGCGGGGAATGC................................................................ 19 1 1 12.00 12 12 0 0 0
.................................................................................................CTAAGGCACGCGGTGAATGCCAA............................................................. 23 1 1 12.00 12 3 7 0 2
..................................................................................................TAAGGCACGCGGTGAATGCG............................................................... 20 1 1 11.00 11 9 1 1 0
..................................................................................................CAAGGCACGCGGTGAATGCCAA............................................................. 22 1 1 11.00 11 1 10 0 0
..................................................................................................TAAGGCACGCGGCGAATGCCAAG............................................................ 23 1 1 11.00 11 4 7 0 0
..................................................................................................TAAGGCACGCGGTGACTGCCAA............................................................. 22 1 1 11.00 11 3 8 0 0
..................................................................................................TAAGGCACGCGGTGAATGCCACG............................................................ 23 1 1 11.00 11 7 4 0 0
..................................................................................................TAAGGCACGCGGTGAATACCAA............................................................. 22 1 1 11.00 11 2 9 0 0
....................................................................................................AGGCACGCGGTGAATGCCAAGA........................................................... 22 0 1 11.00 11 8 3 0 0
..................................................................................................TAAGGTACGCGGTGAATGCCAAG............................................................ 23 1 1 11.00 11 0 11 0 0
..................................................................................................TAAGGCACGCGGGGAATGCCAAG............................................................ 23 1 1 11.00 11 4 4 0 3
..................................................................................................TAAGGCACGCGGGGAATGCCAA............................................................. 22 1 1 11.00 11 1 9 0 1
..................................................................................................TAAGGCACGCAGTGAATGCCAA............................................................. 22 1 1 11.00 11 0 11 0 0
..................................................................................................TAAGGCACGCGGTGAGTGCCAAG............................................................ 23 1 1 10.00 10 4 6 0 0
..................................................................................................TAAGGCACAAGGTGAATGCC............................................................... 20 2 1 10.00 10 10 0 0 0
................................................................GGTATCCACTGTAGGCCTATATGA............................................................................................. 24 1 1 10.00 10 0 10 0 0
..................................................................................................TAAGGGACGCGGTGAATGCCA.............................................................. 21 1 1 10.00 10 6 3 0 1
..................................................................................................TAAGGCACGCGGTCAATGCCAA............................................................. 22 1 1 10.00 10 1 9 0 0
..................................................................................................CAAGGCACGCGGTGAATGC................................................................ 19 1 1 10.00 10 10 0 0 0
..................................................................................................TAAGGCACGCGGAGAATGCC............................................................... 20 1 1 9.00 9 7 2 0 0
..................................................................................................TGAGGCACGCGGTGAATGCCAA............................................................. 22 1 1 9.00 9 2 7 0 0
..................................................................................................TAAGGCACGCGGTGAACGC................................................................ 19 1 1 9.00 9 9 0 0 0
..................................................................................................GAAGGCACGCGGTGAATGCCAA............................................................. 22 1 1 9.00 9 4 5 0 0
..................................................................................................TACGGCACGCGGTGAATGC................................................................ 19 1 1 9.00 9 9 0 0 0
..................................................................................................TAAGGCACGCGGTGAATGCCCA............................................................. 22 1 1 9.00 9 3 6 0 0
..................................................................................................TAAGACACGCGGTGAATGC................................................................ 19 1 1 9.00 9 9 0 0 0
..................................................................................................TAAGGCACGCGCTGAATGCCAA............................................................. 22 1 1 9.00 9 2 7 0 0
..................................................................................................TAAGGCACGCGGTGAATGCGA.............................................................. 21 1 1 9.00 9 7 1 0 1
...................................................................................................AGGGCACGCGGTGAATGCCA.............................................................. 20 1 1 9.00 9 9 0 0 0
..................................................................................................TAAGGTACGCGGTGAATGC................................................................ 19 1 1 9.00 9 7 2 0 0
..................................................................................................TAAGGCATGCGGTGAATGCCAAG............................................................ 23 1 1 9.00 9 3 6 0 0
..................................................................................................TACGGCACGCGGTGAATGCCAA............................................................. 22 1 1 9.00 9 3 6 0 0
..................................................................................................TAATGCACGCGGTGAATGCCAAG............................................................ 23 1 1 8.00 8 4 3 0 1
..................................................................................................TAAGGCACGCGGTGAATGCCAATT........................................................... 24 2 1 8.00 8 4 2 2 0
..................................................................................................TAAGGCACGCGGTGAATGCCAAGTT.......................................................... 25 2 1 8.00 8 8 0 0 0
..................................................................................................CAAGGCACGCGGTGAATGCCAAG............................................................ 23 1 1 8.00 8 2 6 0 0
...............................................................TGGTATCCACTGTAGGCCTAT................................................................................................. 21 0 1 8.00 8 2 5 0 1
..................................................................................................TAAGGCACGCGGTTAATGCCAA............................................................. 22 1 1 8.00 8 5 3 0 0
...................................................................................................TAGGCACGCGGTGAATGCC............................................................... 19 1 1 8.00 8 8 0 0 0
..................................................................................................TAAGGCGCGCGGTGAATGCCAA............................................................. 22 1 1 8.00 8 2 6 0 0
.................................................................................................CTAAGGCACGCGGTGAATGCCAAG............................................................ 24 1 1 8.00 8 3 5 0 0
..................................................................................................TAAGGCACGCGGTGCCTGCCA.............................................................. 21 2 1 8.00 8 7 1 0 0
..................................................................................................TAAGGCACGCGGTGGATGC................................................................ 19 1 1 8.00 8 8 0 0 0
..................................................................................................TAAGGCACGCGATGAATGCCAA............................................................. 22 1 1 8.00 8 3 5 0 0
...................................................................................................TAAGCACGCGGTGAATGCC............................................................... 19 2 2 8.00 16 14 0 1 1
..................................................................................................TAAGGCACAAGGTGAATGCCA.............................................................. 21 2 1 8.00 8 8 0 0 0
..................................................................................................TATGGCACGCGGTGAATGCCAA............................................................. 22 1 1 8.00 8 0 8 0 0
..................................................................................................TAAGGCACGCGGTGATTGCCAA............................................................. 22 1 1 8.00 8 0 6 0 2
..................................................................................................TATGGCACGCGGTGAATGCC............................................................... 20 1 1 8.00 8 7 0 1 0
................................................................GGTATCCACTGTAGGCCTAT................................................................................................. 20 0 1 8.00 8 2 6 0 0
..................................................................................................TAAGGCAAGCGGTGAATGCCAA............................................................. 22 1 1 7.00 7 4 3 0 0
..................................................................................................TAAGGCACGCGGTGAAGGCCA.............................................................. 21 1 1 7.00 7 2 5 0 0
..................................................................................................TAAGCCACGCGGTGAATGCCAAG............................................................ 23 1 1 7.00 7 2 5 0 0
..............................................................CTGGTATCCACTGTAGGCCTATA................................................................................................ 23 0 1 7.00 7 6 0 1 0
..................................................................................................TAAGGCACGCGGTGACTGCCAAG............................................................ 23 1 1 7.00 7 4 3 0 0
..................................................................................................TAAGGCACGCGGTGAATGCCATA............................................................ 23 2 1 7.00 7 7 0 0 0
..................................................................................................TAAGGCACGCGGTGAATGCTAAG............................................................ 23 1 1 7.00 7 1 5 0 1
...................................................................................................AGGGCACGCGGTGAATGCCAAG............................................................ 22 1 1 7.00 7 7 0 0 0
..................................................................................................TAAGGCACGCGGTGAATGACAA............................................................. 22 1 1 7.00 7 5 2 0 0
..................................................................................................TAAGGCGCGCGGTGAATGC................................................................ 19 1 1 7.00 7 7 0 0 0
..................................................................................................TAAGGCACGCGGTGTATGCC............................................................... 20 1 1 7.00 7 5 1 1 0
..................................................................................................TAAGGCACGCGGTGAATGCCAGG............................................................ 23 1 1 7.00 7 4 3 0 0
..................................................................................................TAAGGCAAGCGGTGAATGCCAAG............................................................ 23 1 1 7.00 7 7 0 0 0
..................................................................................................TAAGGCACGCCGTGAATGCCAA............................................................. 22 1 1 7.00 7 1 6 0 0
..................................................................................................TAACGCACGCGGTGAATGCCAA............................................................. 22 1 1 7.00 7 6 1 0 0
..................................................................................................TAAGGCACGCGGTGAATGCCTA............................................................. 22 1 1 6.00 6 4 2 0 0
................................................................................................TCTAAGGCACGCGGTGAATGCCA.............................................................. 23 2 1 6.00 6 2 4 0 0
..................................................................................................TAAGGCACGCGGTGAATTCCAAG............................................................ 23 1 1 6.00 6 4 2 0 0
..................................................................................................TAAGGCAGGCGGTGAATGCCAA............................................................. 22 1 1 6.00 6 2 4 0 0
..................................................................................................TAAGGCACGCGTTGAATGCCAA............................................................. 22 1 1 6.00 6 0 6 0 0
..................................................................................................TAAGGCACGCGGAGAATGC................................................................ 19 1 1 6.00 6 6 0 0 0
..................................................................................................TAAAGCACGCGGTGAATGCCAA............................................................. 22 1 1 6.00 6 1 5 0 0
..................................................................................................TAAGGCCCGCGGTGAATGC................................................................ 19 1 1 6.00 6 6 0 0 0
....................................................................................................AGGCACGCGGTGAATGCCAA............................................................. 20 0 1 6.00 6 6 0 0 0
..................................................................................................TAAGGCACTCGGTGAATGCCAA............................................................. 22 1 1 6.00 6 2 4 0 0
..................................................................................................TAAGGCACGCGGTGATTGCC............................................................... 20 1 1 6.00 6 6 0 0 0
..................................................................................................TAAGGCACGCGGTGAAAGCC............................................................... 20 1 1 6.00 6 5 1 0 0
..................................................................................................TAAGGCACGCGGTGAATAAC............................................................... 20 2 1 6.00 6 6 0 0 0
..................................................................................................TAAGGCACGCGGAGAATGCCAA............................................................. 22 1 1 6.00 6 1 5 0 0
..................................................................................................TAAGGCACGCGGTCAATGCCAAG............................................................ 23 1 1 6.00 6 3 3 0 0
...............................................................TGGTATCCACTGTAGGCCTA.................................................................................................. 20 0 1 6.00 6 5 1 0 0
..................................................................................................TAAGGCACGCGGTAAATGCCAAG............................................................ 23 1 1 6.00 6 4 2 0 0
..................................................................................................TAGGGCACGCGGTGAATGCCAAG............................................................ 23 1 1 6.00 6 2 4 0 0
..................................................................................................GAAGGCACGCGGTGAATGC................................................................ 19 1 1 6.00 6 6 0 0 0
..................................................................................................TAAGGCACGCGGTGAATGACAAG............................................................ 23 1 1 6.00 6 3 2 1 0
..................................................................................................TAAGGCACGCGGTGAATGCCAAGG........................................................... 24 1 1 5.00 5 4 0 0 1
..................................................................................................TAAGGCGCGCGGTGAATGCCAAG............................................................ 23 1 1 5.00 5 3 2 0 0
...................................................................................................TAGGCACGCGGTGAATGCCAA............................................................. 21 1 1 5.00 5 1 4 0 0
..................................................................................................TAAGGCACGCGGTGTATGC................................................................ 19 1 1 5.00 5 5 0 0 0
..................................................................................................TAAGGCTCGCGGTGAATGCC............................................................... 20 1 1 5.00 5 4 1 0 0
..................................................................................................TAAGGCACGCGGTGAATGTT............................................................... 20 2 1 5.00 5 5 0 0 0
..................................................................................................TAAGGCACGGGGTGAATGCC............................................................... 20 1 1 5.00 5 5 0 0 0
..................................................................................................TAAGGCACCAGGTGAATGCCA.............................................................. 21 2 1 5.00 5 4 1 0 0
..................................................................................................TAAGGCACGCGGTGAATACCAAG............................................................ 23 1 1 5.00 5 3 1 1 0
..................................................................................................TAAGGCACGCGGTGAATGCAAAG............................................................ 23 1 1 5.00 5 4 1 0 0
..................................................................................................TAAGGCAGGCGGTGAATGC................................................................ 19 1 1 5.00 5 5 0 0 0
..................................................................................................TAAGGCACGCGGTGAATCCCAAG............................................................ 23 1 1 5.00 5 3 2 0 0

Anti-sense strand reads

TCGAAGCAGCAATACGTTACTCATTTCGGGTTCACAGGAAGCAGTAAACCATGCAAAAAGAGGACCATAGGTGACATCCGGATATACATAAAGGTGGTATTCCGTGCGCCACTTACGGTTCTCGCTTGCGTCAAGATGTTTAATGAGTATGGGTTACTATCTGTCTTTATTATCTGTTTAA

***********************************************...(((((..(((.((((((.((((((..((((.((((.........))))))))..)))))).)))))).))).))))).....************************************************* 		Read size # Mismatch Hit Count Total Norm Total V113

male body		 M054

female body

 V115

head
..............................................................................................................................TGCGTCAAGTTGATTCATGAG.................................. 21 3 4 0.25 1 1 0 0
...............................................................ACCATAGCGGCCATCCGGA................................................................................................... 19 3 8 0.13 1 0 1 0
..............................................................................................................................TGAGTCAAGGTGTTTACTGA................................... 20 3 9 0.11 1 1 0 0
........GGAATAGGTTCCTCATTTC.......................................................................................................................................................... 19 3 19 0.11 2 0 1 1
...............................................................................................................................GAGTCAAGGTGTTTACTGA................................... 19 3 20 0.10 2 2 0 0
................................................................................CATATACAGAAGGGTGGTA.................................................................................. 19 3 15 0.07 1 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droSec2 scaffold_7:1207278-1207458 + dse-mir-124 Known_mirbase AGCTTCG------------TCGTTA---TGCA--ATGA-GTAAAGCCCAAG---------------------------------------------------TGTC------------CT-TCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAA------TTACTCATA-CC-------CAA----------TGATAGACAGAAA-----------------------------------TAATAGAC-AAATT
droSim2 2l:17125761-17125962 + dsi-mir-124 Known_mirbase AGCTTCG------------ACGTTA---TGCA--ATGA-GTAAAGCCCAAG---------------------------------------------------TGTC------------CT-TCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAA------TTACTCATA-CC-------CAA----------TGATACACCGAAAGTGTTTAAT-AGCCCGAAATCA-------------TAATAGCC-AAATT
dm3 chr2L:17566322-17566529 + dme-mir-124 Known_mirbase AGTTTCG------------TTGTTACATTGCATAACGACATAAAGCCCAAG---------------------------------------------------TGTC------------CT-TCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAA------TTACTCATA-CC-------CAA----------TAATAGACAGAAAGTGTTTAAA-AGCCTGAAATCA-------------TAATAGAC-AAATT
droEre2 scaffold_4845:6683894-6684109 - der-mir-124 Known_mirbase AGTTTCG------------TCGTTA---TGCA--ATGA-GTAAAGCCCAAG---------------------------------------------------TGTC------------CT-TCATCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAA------TTACTCATA-CC-------CAA----------TGATAGACCAAAAGTGTTTGAA-GGCCCTAAAACTTCAATAACAAATAAAATAAACGAAATT
droYak3 2R:3533107-3533321 - dya-mir-124 Known_mirbase AGTTTCG------------TCGTTA---TGCA--ATGA-GTAAAGCCCAAG---------------------------------------------------TGTT------------CT-TCATCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAA------TTTCTCATA-CC-------CAA----------TGATAGACCAAAACTGCCTGAC-AGCCCTAAAACTTCAGCGACAAATAAAATAAAC-AAGTT
droEug1 scf7180000409016:190087-190264 + ACTTCCG------------CTGTTA---TGCA--ATGA-GTAAACCCCAAG---------------------------------------------------TGCC------------CT-TTGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAA------TTACTCAGATCT-------CAA----------CTTTAAAGAAATAGTGTTAAAA----------------------------------------
droBia1 scf7180000302422:6140599-6140776 - AGCTT---------------TGTTA---TGCA--ATGA-GTAAAGTCCAAG---------------------------------------------------TGTC------------CT-CCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAA------TTACTCATA-CC-------CAG----------GAACCAACAAAAAGTGTTCAGA-AGC-----------------------------------C
droTak1 scf7180000415617:20626-20813 - ACT----------------TCGTTA---TGCA--ATGA-GTTCAGCCCAAG---------------------------------------------------TGCC------------TT-TCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATCTCTACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAA------TTACTCATA-AT-------TAT----------AAACAAACAAAAAGTGTTTAAC-A------------------------TCGTATACAATATT
droEle1 scf7180000491046:269579-269767 + --CTTC---------AATGTCGTTA---TGCA--ATGA-GTAAAGCCCAAG---------------------------------------------------TGTT------------CC-TCTTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGCTCTACAAG------TTACTCAAA-CAAAAAACAAAG----------CGACAAACAAAAAGTGTTTATA-AGG-----------------------------------C
droRho1 scf7180000777709:22753-22935 + AGCCACA------------TCGTTA---TGCA--ATGA-GTAAAGCCCAAG---------------------------------------------------TGTT------------CC-TCTTGATTGGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAA------TTACTCAAA-GC-------AAA----------T-ATAAACAAAAAGTGCTTAAAAAGGC---------------------------------CT
droFic1 scf7180000453855:351046-351210 + AC----G------------ACGTTA---TGCA--ATGA-GTAAAGCCCAAG---------------------------------------------------TGTT------------CG-CCATCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAA------TTACTCAAA-TC-------CAAGGAAGATAATTGAT----------------------------------------------------------
droKik1 scf7180000302246:118953-119093 - GGTT-CA------------TAATTA---CGCA--ATGA-GGACCCCTGAAG---------------------------------------------------TGTA-------------------TATTTTGTACTGTTTTCTCCTGGTGTCCACTGTAGGCCTATATGTATTTCGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAATTCTACTGT------TTACTCA---------------------------------------------------------------------------------------
droAna3 scaffold_12916:3309654-3309829 - dan-mir-124 Known_mirbase AGA----------------TGGTTA---TGCA--ATCG-CCTTGCCCAGAG---------------------------------------------------GCTT------------TT-GTGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTACAAA------CTACAA---------------A-TGACATA--TTAAAAATACAAA-------------------------------------ATATATATGATT
droBip1 scf7180000396737:1463460-1463628 + ACCGTCCTCCCATTCAAGATGGTTA---TGCA--ATCG-CCTCGCCCTGAG---------------------------------------------------GCTT------------TT-GTGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTACAAA------TCTC--AA-------------A-CGAC--------------------------------------------------------------ATATT
dp5 4_group3:10867589-10867760 - dps-mir-124 Known_mirbase GCCTT----------------GT-----------ATGG-GGGA--TCC-----------------------------------------------------------ATTTTTCTCAGTGCTCGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCGACCATAAGGCACGCGGTGAATGCCAAGAGCGGACGAAACTCTACTATCAAAAACAGC---------------AAA-CGAC-----------GCCAAAAGTGTTTAAG-----------------------------------AAAAT
droPer2 scaffold_8:2078686-2078857 - dpe-mir-124 Known_mirbase GCCTT----------------GT-----------ATGG-GGGA--TCC-----------------------------------------------------------ATTTTTCTCAGTGCTCGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCGACCATAAGGCACGCGGTGAATGCCAAGAGCGGACGAAACTCTACTATCAAAAACAGC---------------AAA-CGAC-----------GCCAAAAGTGTTTAAG-----------------------------------AAAAT
droWil2 scf2_1100000004577:940165-940334 - dwi-mir-124 Known_mirbase TGAATTG------------AC---A---TACA--TTTT-G----------G---------------------------------------------------AGTGCTTTATTCTC---A-GAGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGCAGGCCTATATGTTATTTGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAATTCTACAAA------AACC-AAAA-CG-------CAA----------AAATATAAAAATA----------------------------------------AAG-AAA-A
droVir3 scaffold_12963:16493103-16493280 + dvi-mir-124 Known_mirbase AGTTCCG------------GT--------------------------TTGGTGTTT---TTGA----TGTCCTGC---CAACATTCAGGACAACATT---CGTGAG------------TG-CCGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTCTATGAATTTTGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTACAAT------TAACAAAAA-----------------------------------------------------------------------TAACAAAC-GA---
droMoj3 scaffold_6500:21419399-21419600 + dmo-mir-124 Known_mirbase TGCTTTG--------CATCTCATTA---CGCA--AGTT-CC---GGTTTG-TGCGTCAATCGACAATTGCCCTGCGCTCAGCGTGCGGGAC-----TCGCCGTGAG------------TG-ACGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTCTATGAATTTTGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTACAAA------ATCC----------------AA----------CAAGCGAC-----------------------------------------------------C
droGri2 scaffold_15252:13906818-13906948 + dgr-mir-124 Known_mirbase --------------------------------------------------G---------------------------------------------------TGTG------------TG-CCGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTCTATGTTTTTTGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTACACT------TC-----CA-TT-------CAA----------ATATAACCAGCAA-------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSec2
AGCTTCG------------TCGTTA---TGCA--ATGA-GTAAAGCCCAAG---------------------------------------------------TGTC------------CT-TCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAA------TTACTCATA-CC-------CAA----------TGATAGACAGAAA-----------------------------------TAATAGAC-AAATTSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCA..........................................................................................................................21199797.0099797138821622742468823
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCC...........................................................................................................................20144949.00449493001282126442103
....................................................................................................................................................................................TAAGGCACGCGGTGAATGC............................................................................................................................19119485.00194855820610819113
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAA.........................................................................................................................22111729.001172911510689592549
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAG........................................................................................................................2315283.00528313012222962735
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCT..........................................................................................................................2111002.00100214199960
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAA........................................................................................................................231463.0046396237211
..................................................................................................................................................GGTATCCACTGTAGGCCTATATG..........................................................................................................................................................231461.0046113339946
....................................................................................................................................................................................TAAGGCACGCGGTGAATG.............................................................................................................................181380.00380823367
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGA.......................................................................................................................241291.0029141342232
.....................................................................................................................................................................................AAGGCACGCGGTGAATGCCA..........................................................................................................................201283.00283136333111
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGT.......................................................................................................................241225.002252653164
.................................................................................................................................................TGGTATCCACTGTAGGCCTATATG..........................................................................................................................................................241212.002124413371
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCA...........................................................................................................................201196.00196155185
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAT........................................................................................................................231135.00135314883
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCG..........................................................................................................................211134.00134333791
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCC..........................................................................................................................211133.00133014092
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAT.........................................................................................................................221114.0011491599
....................................................................................................................................................................................TAAGGCACGCGGTGAATGT............................................................................................................................191111.00111090102
.....................................................................................................................................................................................AAGGCACGCGGTGAATGCC...........................................................................................................................19188.0088200068
....................................................................................................................................................................................TAAGGCACGCGGTGAATGA............................................................................................................................19165.006516058
..................................................................................................................................................GGTATCCACTGTAGGCCTATA............................................................................................................................................................21155.0055003124
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCT...........................................................................................................................20154.005412051
......................................................................................................................................................................................AGGCACGCGGTGAATGCCA..........................................................................................................................19145.0045901125
.....................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAG........................................................................................................................22136.0036801216
.....................................................................................................................................................................................AAGGCACGCGGTGAATGC............................................................................................................................18134.003460028
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCATT........................................................................................................................23133.003313029
......................................................................................................................................................................................AGGCACGCGGTGAATGCCAAG........................................................................................................................21132.003220525
.................................................................................................................................................TGGTATCCACTGTAGGCCTATA............................................................................................................................................................22129.0029011414
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAC.........................................................................................................................22128.002810819
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAC........................................................................................................................23127.0027101511
.....................................................................................................................................................................................AAGGCACGCGGTGAATGCCAA.........................................................................................................................21124.002414055
......................................................................................................................................................................................AGGCACGCGGTGAATGCC...........................................................................................................................18120.002000020
....................................................................................................................................................................................TAAGGCACGCGGTGAATT.............................................................................................................................18120.002000020
..................................................................................................................................................GGTATCCACTGTAGGCCTATAT...........................................................................................................................................................22119.001910153
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAG.........................................................................................................................22119.00190199
......................................................................................................................................................................................AGGCACGCGGTGAATGCCAAGT.......................................................................................................................22119.001900514
.................................................................................................................................................TGGTATCCACTGTAGGCCTATAT...........................................................................................................................................................23115.00150087
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGC.......................................................................................................................24115.001500312
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCG...........................................................................................................................20111.00110119
......................................................................................................................................................................................AGGCACGCGGTGAATGCCAAGA.......................................................................................................................22111.00110038
..................................................................................................................................................GGTATCCACTGTAGGCCTATATGA.........................................................................................................................................................24110.001000100
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAATT.......................................................................................................................2418.0080224
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGTT......................................................................................................................2518.0080008
.................................................................................................................................................TGGTATCCACTGTAGGCCTAT.............................................................................................................................................................2118.0081052
..................................................................................................................................................GGTATCCACTGTAGGCCTAT.............................................................................................................................................................2018.0080062
................................................................................................................................................CTGGTATCCACTGTAGGCCTATA............................................................................................................................................................2317.0070106
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCATA........................................................................................................................2317.0070007
......................................................................................................................................................................................AGGCACGCGGTGAATGCCAA.........................................................................................................................2016.0060006
.................................................................................................................................................TGGTATCCACTGTAGGCCTA..............................................................................................................................................................2016.0060015
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGG.......................................................................................................................2415.0051004
....................................................................................................................................................................................TAAGGCACGCGGTGAATGTT...........................................................................................................................2015.0050005
droSim2
AGCTTCG------------ACGTTA---TGCA--ATGA-GTAAAGCCCAAG---------------------------------------------------TGTC------------CT-TCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAA------TTACTCATA-CC-------CAA----------TGATACACCGAAAGTGTTTAAT-AGCCCGAAATCA-------------TAATAGCC-AAATTSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCA..........................................................................................................................21120419.00204198302572275231156210221031358308731312
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCC...........................................................................................................................2019569.009569152620849150749905915028700010
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAA.........................................................................................................................2216139.00613990153448542630234601141611601315
..................................................................................................................................................GGTATCCACTGTAGGCCTATATG..........................................................................................................................................................2313611.00361110372622973170053023101000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGC............................................................................................................................1912368.00236810000433221403140302202
....................................................................................................................................................................................TAAGGCACGCGGTGAATG.............................................................................................................................1812061.002061910126201601110400001
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAG........................................................................................................................231893.0089316315446023001012157802012
.....................................................................................................................................................................................AAGGCACGCGGTGAATGCCA..........................................................................................................................201359.0035900023831800000900001
..................................................................................................................................................GGTATCCACTGTAGGCCTATAT...........................................................................................................................................................221192.00192151153011100300800000
..................................................................................................................................................GGTATCCACTGTAGGCCTATA............................................................................................................................................................211192.001923501210015000002100000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCT..........................................................................................................................211164.001641581010000000400000
.................................................................................................................................................TGGTATCCACTGTAGGCCTATATG..........................................................................................................................................................241140.0014058156102000002200000
..................................................................................................................................................GGTATCCACTGTAGGCCT...............................................................................................................................................................181137.0013712011000600000000000
................................................................................................................................................CTGGTATCCACTGTAGGCCT...............................................................................................................................................................201109.001091081000000000000000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAA........................................................................................................................23184.0084506300020306203000
.....................................................................................................................................................................................AAGGCACGCGGTGAATGCC...........................................................................................................................19182.0082000237700000000000
.....................................................................................................................................................................................AAGGCACGCGGTGAATGCCAA.........................................................................................................................21179.0079000237000000200101
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCC..........................................................................................................................21168.00682120000000004500000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGA.......................................................................................................................24161.006110000140313260400000
..................................................................................................................................................GGTATCCACTGTAGGCCTATATGA.........................................................................................................................................................24156.0056204800000000600000
.....................................................................................................................................................................................AAGGCACGCGGTGAATGC............................................................................................................................18154.0054000025200000000000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCG..........................................................................................................................21152.00523127200000001000000
......................................................................................................................................................TCCACTGTAGGCCTATATG..........................................................................................................................................................19150.0050480200000000000000
....................................................................................................................................................TATCCACTGTAGGCCTATATG..........................................................................................................................................................21135.00352401100000000000000
...................................................................................................................................................GTATCCACTGTAGGCCTATATG..........................................................................................................................................................22132.00321401800000000000000
...............................................................................................................................................CCTGGTATCCACTGTAGGCCT...............................................................................................................................................................21126.0026230300000000000000
......................................................................................................................................................................................AGGCACGCGGTGAATGCCA..........................................................................................................................19124.0024000202100000100000
..................................................................................................................................................GGTATCCACTGTAGGCCTAT.............................................................................................................................................................20123.002380500600000400000
.......................................................................................................................................................CCACTGTAGGCCTATATG..........................................................................................................................................................18121.0021200100000000000000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGT.......................................................................................................................24116.0016200100000001300000
..................................................................................................................................................GGTATCCACTGTAGGCCTATATGT.........................................................................................................................................................24115.001540900100000100000
..............................................................................................................................................TCCTGGTATCCACTGTAGGCCT...............................................................................................................................................................22113.001350800000000000000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAT.........................................................................................................................22113.001320000001000226000
................................................................................................................................................CTGGTATCCACTGTAGGCCC...............................................................................................................................................................20113.0013130000000000000000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAT........................................................................................................................23113.001330000002100205000
......................................................................................................................................................................................AGGCACGCGGTGAATGCCAA.........................................................................................................................20112.0012000001200000000000
....................................................................................................................................................................................TAAGGCACGCGGTGAA...............................................................................................................................16111.001100000006410000000
..................................................................................................................................................GGTATCCACTGTAGGCCC...............................................................................................................................................................18111.0011110000000000000000
..................................................................................................................................................GGTATCCACTGTAGGCCTA..............................................................................................................................................................19110.001030200400000100000
................................................................................................................................................CTGGTATCCACTGTAGGCCTAT.............................................................................................................................................................2219.00990000000000000000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAC........................................................................................................................2319.00910000000000800000
.................................................................................................................................................TGGTATCCACTGTAGGCCTATA............................................................................................................................................................2219.00910201200000300000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCATT........................................................................................................................2318.00800000000000017000
.................................................................................................................................................TGGTATCCACTGTAGGCCTATAT...........................................................................................................................................................2318.00820202200000000000
...............................................................................................................................................CCTGGTATCCACTGTAGGCCC...............................................................................................................................................................2117.00770000000000000000
..................................................................................................................................................GGTATCCACTGTAGGCCTATAC...........................................................................................................................................................2217.00710600000000000000
.......................................................................................................................................................................................GGCACGCGGTGAATGCCA..........................................................................................................................1817.00700000600001000000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAC.........................................................................................................................2217.00700000000000700000
.................................................................................................................................................TGGTATCCACTGTAGGCCT...............................................................................................................................................................1916.00640000200000000000
..................................................................................................................................................GGTATCCACTGTAGGCCTATATGG.........................................................................................................................................................2416.00600600000000000000
......................................................................................................................................................................................AGGCACGCGGTGAATGCCAAGA.......................................................................................................................2216.00600000500000100000
.....................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAG........................................................................................................................2216.00600011200000200000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAG.........................................................................................................................2216.00620110000000200000
....................................................................................................................................................................................TAAGGCACGCGGTGA................................................................................................................................1516.00600000005010000000
......................................................................................................................................................................................AGGCACGCGGTGAATGCCAAG........................................................................................................................2115.00500010300000100000
.....................................................................................................................................................ATCCACTGTAGGCCTATATG..........................................................................................................................................................2015.00520300000000000000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCT...........................................................................................................................2015.00530000002000000000
..................................................................................................................................................GGTATCCACTGTAGGCCTATATA..........................................................................................................................................................2315.00510200000000200000
....................................................................................................................................................................................TAAGGCACGCGGTGAAT..............................................................................................................................1715.00500000001220000000
..................................................................................................................................................GGTATCCACTGTAGGCCTATATT..........................................................................................................................................................2314.00410100000000200000
.................................................................................................................................................TGGTATCCACTGTAGGCC................................................................................................................................................................1814.00420000200000000000
..................................................................................................................................................GGTATCCACTGTAGGCCTT..............................................................................................................................................................1914.00440000000000000000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGA............................................................................................................................1914.00400000003000001000
..................................................................................................................................................GGTATCCACTGTAGGCCG...............................................................................................................................................................1814.00440000000000000000
.................................................................................................................................................TGGTATCCACTGTAGGCCTAT.............................................................................................................................................................2114.00400000200110000000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCA...........................................................................................................................2013.00310000000000101000
..................................................................................................................................................GGTATCCACTGTAGGCCTATATGC.........................................................................................................................................................2413.00310200000000000000
................................................................................................................................................CTGGTATCCACTGTAGGCCG...............................................................................................................................................................2013.00330000000000000000
................................................................................................................................................CTGGTATCCACTGTAGGCCTATA............................................................................................................................................................2313.00330000000000000000
...................................................................................................................................................GTATCCACTGTAGGCCTATA............................................................................................................................................................2013.00300300000000000000
....................................................................................................................................................................................TAAGGCACGCGGTGAATTT............................................................................................................................1922.50500000001010003000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGT............................................................................................................................1912.00200000002000000000
..................................................................................................................................................GGTATCCACTGTAGGCCTATAG...........................................................................................................................................................2212.00200200000000000000
.................................................................................................................................................TGGTATCCACTGTAGGCCC...............................................................................................................................................................1912.00220000000000000000
..................................................................................................................................................GGTATCCACTGTAGGCCTATATAA.........................................................................................................................................................2412.00200200000000000000
....................................................................................................................................................................................TAAGGCACGCGGTGAATTA............................................................................................................................1912.00200000000000002000
.................................................................................................................................................TGGTATCCACTGTAGGCCTATATGT.........................................................................................................................................................2512.00200000100000001000
......................................................................................................................................................................................AGGCACGCGGTGAATGCCAAGAGCG....................................................................................................................2512.00200000200000000000
......................................................................................................................................................................................AGGCACGCGGTGAATGCC...........................................................................................................................1812.00200000200000000000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAATT.......................................................................................................................2412.00200000001000001000
............................................................................................................................................TCTCCTGGTATCCACTGTAGGCC................................................................................................................................................................2312.00200200000000000000
.....................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAGA.......................................................................................................................2312.00200000200000000000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGG............................................................................................................................1911.00110000000000000000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCATA........................................................................................................................2311.00100000000000100000
.................................................................................................................................................TGGTATCCACTGTAGGCCTATATGA.........................................................................................................................................................2511.00100000000000100000
..............................................................................................................................................TCCTGGTATCCACTGTAGGCCC...............................................................................................................................................................2211.00100100000000000000
dm3
AGTTTCG------------TTGTTACATTGCATAACGACATAAAGCCCAAG---------------------------------------------------TGTC------------CT-TCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAA------TTACTCATA-CC-------CAA----------TAATAGACAGAAAGTGTTTAAA-AGCCTGAAATCA-------------TAATAGAC-AAATTSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCA..........................................................................................................................211710203.007102030000399013672026213601581071159015093306885390018121039420136225118349578263113111000220360203012000311717205030000000000000000010211047738317236177986523241115920644915492709141996714321627493140317476832115291376088188318105516547656460810154348366496427591341209317352440513832775151996626847663336561610000000000189161592910020001604520000008012814121841693501038559244388111552591296016846902345355441921700133031041443020560432000007001420324201744392300030000200006300670487344136211185185513358251039682297020135316103032321701210015940311441304106121767340122612635068816130412444109313542146183673323713541213693230020211121115430597306100531039271271218
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAA.........................................................................................................................221237584.0023758400009583832220160517601501046134095317614401002202006205224401060100000100000020010003321736200000000000000000021223734154774255573881615723796944657184480429119608180460177013831347461891564130118641943452182199154116481620890342325771639282540130165312773116420100000000001392619287701001200400000000170006801129080150265520215716284130632000008279141000505000000110000000116133811000302000056002881282815421520012344861128020004540000000010010001101007050000054710177989321114419712456402801157096165000021011000002175612322941723104200
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCC...........................................................................................................................201191799.0019179900001154025352152080922111080000404424467330561877108780000001000800100000001931124900000000000000000000043915131232441001120614144188121576358171591177456719711867301313110615031111522102721514608446115248979461512110000000000262280000010000101000000004617312887011821961552219879334656179281365159212104730210140300130141000000000000017050151156011000010000220041750207741189818912192765150106888011001700001100027000000261014110100251495614861181802797869954494169960120421251112916430200503000000020304295785431844422713341117114
....................................................................................................................................................................................TAAGGCACGCGGTGAATGC............................................................................................................................19151356.005135600000000000000684010200000020219204242543770000000000000000000002816700000000000000000000066255181106010421312034142112277641005035218621027217089127012340431721371980000000000505400000011000000000000201813480103921313112146724175580270000035960700004020000000000000150000116000001000000000019402892353291093304976149500000386000000011000000000000000000139742562521167323543517222000218401061310000000000000000172180921614276102840113110
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAG........................................................................................................................23131933.003193300009140812213912947045202517000000100101856745101000000000000000000000054332200000000000000000000094121511697179242039491822181653879835169859325237124711621243131610583660558398117810011046415014119116135000000000037738123101000000000000000000405696038220102452619629113861406610010025833020000200000000000000000001117020513230000000050157914835450001434691104020001810000000010100000511010300002820158312481359437185013052330100940478000000000012000111087919301091523001500
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCC..........................................................................................................................21111343.00113430000500011001000000000000000000000000000000000000000000000000000000000000000000028202611300004151994188212511554212013212000021072201163228529410288075123129276535874300000000004020000000000000000000002126921101570051001303041000001600000000000000000000000000000000000000000000100694804261311002140170024000001600000000000000000000000000002855413117541040000003801109132000000000000000024000100000000
..................................................................................................................................................GGTATCCACTGTAGGCCTATATG..........................................................................................................................................................23110344.0010344000012123084304680100000000000026214246503510000000000000000000002010000000000000000000001350710522611204280110131592710581455410125913421200032121422791040713201209049260371131410000000000210227610000000300000000000005055080622756050502214918316378000002900000000000000000000000000001000001000000000000158144010111000173307000004000100000000000000000000001164102871451475603211312110012018180000000200000000213921511000100
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAA........................................................................................................................2319113.00911300005400435508453030011110000300000000001000000000000000000000000000000000000000000000966020686640520814110247113124742187514814618423329522231812939131419405006700901203027228380000000000817040000000000000000000001181990870014110521040900735000004010020000101000000000000000101000000000100000010056570215000018410140000012100000000000000000000010000075102708319112149000000120711000000000000000002800202000000
....................................................................................................................................................................................TAAGGCACGCGGTGAATG.............................................................................................................................1817444.00744400000000000000100130000402001935929430000000000000000000000100000000000000000000000159025447000416115161654122697114215739001041124217250712416010251094710000000000000100000000000000010000000213608502036459222847620000043103000010100000000000008000000300000000000000005160480300111225180000013000000000000000000000000000020911425733789321100000380313100000001000000004624431795317001000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCT..........................................................................................................................2114729.00472900004700001229301400410000000000000000000000000000000000000000000000000000000000000128002422000232519811916381914173195690050201630025098419017210907928800000000000010000000000000000000000016218201000025654421530246000006010100000000000000000000000000000000000000005100121101510930027946002500000280000000010000000000000000000132871532452102201000090670000000000000000241231112000000
.....................................................................................................................................................................................AAGGCACGCGGTGAATGCCA..........................................................................................................................2013007.00300700003000020210000010000000000000000000000000000000000000737013000000000000000000000700111600020717125102210111014223000200111263031112121350269260330826000000000000000000000000000000000000381340019000562146185097013180000020110000000000000000000000000000000000000000000000580115100071302000006000000000000000000000000000028334052321330000002022000000000000000001510111000000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCG..........................................................................................................................2112959.002959000035200210231070013000010000000000000000000000000000000000000000000000000000000020710162300032152261392565266527455881301105157720260140501102401114040122180000000000000000000000000000000000001401180800093602322001910000046000000000000000000000000000100100000000000000001621036730003170070001028000000000000000000001000000031595454030531100007045000000000000000005601100000000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAT........................................................................................................................2312270.00227000001010082201100100310000200000000000000000000000000000000000000000000000000000000195714514400060226148111982014202855707270202018065690160110000101016187000000000021200000000000000000000000293902700242902901008000000580000000000000000000000000000000000000000000140015190121000790100000300000000000000000000000000001144221941621000000500400000000000000001601000000000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGA.......................................................................................................................2412147.002147000082000412200001000000000001423201000000000000000000000052000000000000000000010094051200013318521141520231016243200400333527010354040614011114120000000000000000000000000000000000004486051001234014704317510000002652030000204000000000000000000000010000000000000028021620001330090000011000000000000000000000000000087140788722213500000010024000000000000000022520300000000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAT.........................................................................................................................2212123.0021230000132121624212303005100000000000000000000000000000000000000000000000000000000000003212015995000451161135401316173414368352207011422490190201010711023141400000000000000000000000000000000000027360211051302309043000006000000000000000000000000000000000000000000064002601500004300100000200000000000000000000000000002516153004110000005002000000000000000012010010000000
.................................................................................................................................................TGGTATCCACTGTAGGCCTATATG..........................................................................................................................................................2411517.0015170000400143000040000000000000000000000000000000000000000000000000000000000000000021126566000015204230012392000300005215030750204050415200000000004141360000000000000000000001526019002182170263491000000600000000000000000000000000000000000000000000000443202400005160100000900000000000000000000000000013686761032432304100000030610000000010000000017920915000000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAC.........................................................................................................................2211470.00147000003200120200200110000000000000000000000000000000000000000000000000000000000000388333389000119323831310552516192100300201615801014560104110382392100000000001020000000000000000000000018150130045040101000000100000000000000000000000000000000000000000000100013902160000340200000400000000000000000000000000004371761611000000700300000000000000000300000000000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCA...........................................................................................................................2011421.001421000014200010200200110000001000000006000000000000000000000000000000000000000000000200100000001107151003430001001031101226101020140100390000000000000000000000000000000000001216040183132301311220000021000000000000000000000000000000100000000000000004101280001511805000006000000000000000000000000000050286382051011000040480000000000000000566622011000000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGT............................................................................................................................1911384.0013840000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000100000000020000000000000040000000000510000000000000000000000000000000000000500001519090030000030000000101000000000000040000000000000000000000000031000001850100000200000000000000000000000000002410122400000200001002000000000000000012113321011000000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGT.......................................................................................................................2411280.00128000006000110200000300000000000000000000000000000000000000000000000000000000000000921233600011714124106212151112166000401002519130001220301110915700000000000010000000000000000000000020330220057171291280310000001320000000000000000000000000000000000000000000000012150124000033505000003000000000000000010000000000030373030530430000004036000000000000001017120010000000
...................................................................................................................................................................................ATAAGGCACGCGGTGAATGCCA..........................................................................................................................2211056.00105600001600019160051004000000000000000000000000000000000000000000000000000000000000030006391003114403381835152317454905004011025591100000000006034000000000000000000000000000000000000000200000300000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021110200000000000000000000000000000000000000000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAG.........................................................................................................................221738.007380000160007162810100000000000000000000000000000000000000000000000000000000000000000211415265000207393172935641128166200001115440150603100020005014000000000000000000000000000000000000620300250402030000005000000000000000000000000000000000000000000000004400300001400000002000000000000000000000000000033291200000000200000000000000000000600000000000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCT...........................................................................................................................201724.0072400005000000100000000000100000000000000000000000000000000000000000000000000000000700000001008000010000461000000000001112000050201601110000000000000000000000000000000000000613080011501408010000000910000000000000000000000000000000000000000000000010317300056402000003000000000000000000000000000023263635023001000020240000000000000000427001111000000
......................................................................................................................................................................................AGGCACGCGGTGAATGCCA..........................................................................................................................191682.00682000000000000000000000000000000000000000000000000000000003000000000000000000000001300513100311315014116171782122400000001621000300302100100000000000000000000000000000000000000018150200076090506000000280000000000000000000000000000000000000000000000053010000007050000020000000000000000000000000000111091301110000000001100000000000000000200000000000
.....................................................................................................................................................................................AAGGCACGCGGTGAATGCC...........................................................................................................................191628.006280000000000000031000000000001000000000000000000000000000042100000000000000000000040000000000001102000190000000002002016002011050402300000000000000000000000000000000000060580260115472480410420000005600000000000000000000000000000000000000000000000000170000350400000400000000000000000000000000001620283702100000002010000000000000000002400000000000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGA............................................................................................................................191616.0061600000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000001200000000000000110002000402200000000000000000000000000000000000026020007010501000000300000000000000000000000000000000000000000000000000012000003701000002000000000000000000000000000037275017000000000040320000000000000000537140100000000
...................................................................................................................................................................................ATAAGGCACGCGGTGAATGCCAA.........................................................................................................................231606.006060000200175140000005000000000000000000000000000000000000000000000000000000000000092506315000040109132161113161815500000000243370100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCATC........................................................................................................................231551.005510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100010110000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000335208000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000
..................................................................................................................................................GGTATCCACTGTAGGCCTATAT...........................................................................................................................................................221535.00535000010005100000000000000000100000000000000000000000000000000000000000000000000002397139774001063034000021714000101006187010000000000001200000000001107100000000000000000000027044146320645300000300000000000000000000000000000000000000000000000860020000110000000000000000000000000000000000004511611200000000001100000000000000000400000000000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAATC.......................................................................................................................241467.004670000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000100001000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000278180000000000000100000000000000000000000000000000000000010100000000000000000000000000000000000000000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAC........................................................................................................................231466.004660000100032041000000000000000000000100000000000000000000000000000000000000000000061125570000082302022120346440000000115241406012000000004027000000000000200000000000000000000000460500551203020000001800000000000000000000000000000000002000000004200480000000140100000000000000000000000000000000006117932300010000100100000000000000000500000000000
.....................................................................................................................................................................................AAGGCACGCGGTGAATGCCAA.........................................................................................................................211461.0046100002000001200000000000000000000000000000000000000000000114200000000000000000000077044430015165028230310319640002000074301010010022201011000000000000000000000000000000000000232201300114011050900000016000000000000000000000000000000000000000000000006300000003000000002000000000000000000000000000011220800000000000000000000000000000000000000000
......................................................................................................................................................................................AGGCACGCGGTGAATGCCAA.........................................................................................................................201283.002830000100000000000000000000000000000000000000000000000000001000000000000000000000016628760003053010222131911540000000061540000000000000000000000000000000000000000000000000000040100020100000000003000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000
..................................................................................................................................................GGTATCCACTGTAGGCCTATATGA.........................................................................................................................................................241270.00270000000004010000000000000000000000000000000000000000000000000000000000000000000000120996510000010212001002000000001160050000000000000000000000000000000000000000000000000020000001100100000000000000000000000000000000000000000000000000000000230000000000000000000000000000000000000000000000000361100000000000000000000000000000000000000000
.....................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAG........................................................................................................................221258.0025800000000000000000000000000000000000000000000000000000000110000000000000000000000110460001002033010011390000000031000030000000000100000000000000000000000000000000000001510012001591110110100000003600000000000000000000000000000000000000000000000200010000110100000200000000000000000000000000002135831220000000000000000000000000000110000000000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCG...........................................................................................................................201257.0025700000000000000000000000000000000000000000000000000000000000000000000000000000000200110000006001000002500000000000000120110301060620000000000000000000000000000000000004502001120723312620000010000000000000000000000000000000000000000000000000201600000500000002000000000000000000000000000061210300100000001011000000000000000024900000000000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCATC.........................................................................................................................221254.002540000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000141113000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................GGTATCCACTGTAGGCCTATA............................................................................................................................................................211254.002540000000100000000000000000004040301000000000000000000000002000000000000000000000021015517000001001700002400000000004200110000015010220000000000202000000000000000000000006302134035007101000000000000000000000000000000000000000000000000000000850010000130100000000000000000000000000000000104526326000000000001000000000000000002101000000000
..................................................................................................................................................GGTATCCACTGTAGGCCTAT.............................................................................................................................................................201191.0019100000000110000000000000000020000005000000000000000000000000000000000000000000000070342700001100250000031010010000213100000000000000040000000000000000000000000000000000000170222022104645000000000000000000000000000000000000000000000000000002500000001300000000000000000000000000000000000000203300000000000000000000000000000400000000000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCCC.........................................................................................................................221183.001830000000000000000000000000000000000000000000000000000000000000000000000000000000080003600000060824000010100000000002001610000000012293000000000000000000000000000000000000320100000000000000001000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
droEre2
AGTTTCG------------TCGTTA---TGCA--ATGA-GTAAAGCCCAAG---------------------------------------------------TGTC------------CT-TCATCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAA------TTACTCATA-CC-------CAA----------TGATAGACCAAAAGTGTTTGAA-GGCCCTAAAACTTCAATAACAAATAAAATAAACGAAATTSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCA..........................................................................................................................211303392.003033923542220183393243054892063370
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCC...........................................................................................................................20175048.00750484671056107352141677608990
....................................................................................................................................................................................TAAGGCACGCGGTGAATGC............................................................................................................................19112704.001270455432661191121480
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAA.........................................................................................................................22112519.00125195147613124125028565850
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAG........................................................................................................................2315016.00501633431980521912432150
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCC..........................................................................................................................2111841.0018412115604602320
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCT..........................................................................................................................2111661.00166112152841810980
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAA........................................................................................................................231810.00810294912338205510
.....................................................................................................................................................................................AAGGCACGCGGTGAATGCCA..........................................................................................................................201779.0077925711133353700
..................................................................................................................................................GGTATCCACTGTAGGCCTATATG..........................................................................................................................................................231688.00688171325312263580
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCA...........................................................................................................................201551.005510041055050
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCG..........................................................................................................................211494.00494192220742420
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGA.......................................................................................................................241313.00313912523122250
....................................................................................................................................................................................TAAGGCACGCGGTGAATG.............................................................................................................................181210.00210100173111690
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAT........................................................................................................................231210.0021061731231510
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGT.......................................................................................................................241199.0019971327651410
.....................................................................................................................................................................................AAGGCACGCGGTGAATGCC...........................................................................................................................191164.0016431114101170
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAT.........................................................................................................................221145.001451013441950
......................................................................................................................................................................................AGGCACGCGGTGAATGCCA..........................................................................................................................191132.001321812401880
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAC.........................................................................................................................221124.001242107280320
.................................................................................................................................................TGGTATCCACTGTAGGCCTATATG..........................................................................................................................................................241122.00122687131870
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAC........................................................................................................................23199.00990221021640
.....................................................................................................................................................................................AAGGCACGCGGTGAATGCCAA.........................................................................................................................21170.0070432920140
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCT...........................................................................................................................20159.0059011302430
....................................................................................................................................................................................TAAGGCACGCGGTGAATGA............................................................................................................................19153.005300100520
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAG.........................................................................................................................22148.0048521621220
..................................................................................................................................................GGTATCCACTGTAGGCCTATA............................................................................................................................................................21143.004339080230
.....................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAG........................................................................................................................22140.0040181510150
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCAC..........................................................................................................................21136.003600331020
......................................................................................................................................................................................AGGCACGCGGTGAATGCC...........................................................................................................................18129.002910300250
.....................................................................................................................................................................................AAGGCACGCGGTGAATGC............................................................................................................................18125.002500100240
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCATT........................................................................................................................23123.002310601150
..................................................................................................................................................GGTATCCACTGTAGGCCTATAT...........................................................................................................................................................22122.002214160100
....................................................................................................................................................................................TAAGGCACGCGGTGAATGT............................................................................................................................19121.002100002190
......................................................................................................................................................................................AGGCACGCGGTGAATGCCAAG........................................................................................................................21120.002020311130
.................................................................................................................................................TGGTATCCACTGTAGGCCTATA............................................................................................................................................................22116.001600020140
..................................................................................................................................................GGTATCCACTGTAGGCCTAT.............................................................................................................................................................20115.00151212090
......................................................................................................................................................................................AGGCACGCGGTGAATGCCAAGT.......................................................................................................................22114.001410201100
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCG...........................................................................................................................20112.00120060150
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGC.......................................................................................................................24112.00120301080
......................................................................................................................................................................................AGGCACGCGGTGAATGCCAA.........................................................................................................................20111.00111102070
droYak3
AGTTTCG------------TCGTTA---TGCA--ATGA-GTAAAGCCCAAG---------------------------------------------------TGTT------------CT-TCATCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAA------TTTCTCATA-CC-------CAA----------TGATAGACCAAAACTGCCTGAC-AGCCCTAAAACTTCAGCGACAAATAAAATAAAC-AAGTTSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCA..........................................................................................................................211142288.0014228815938099452392640696835516901220
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCC...........................................................................................................................20140745.0040745258518535631811212227872950010
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAA.........................................................................................................................22114074.00140741424258223893124928073033110
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAG........................................................................................................................2314473.004473914317155996231365181000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGC............................................................................................................................1914095.0040951377240212662463340000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCC..........................................................................................................................2112757.002757202433416228200000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCT..........................................................................................................................2111903.0019031716226433140720000
..................................................................................................................................................GGTATCCACTGTAGGCCTATATG..........................................................................................................................................................2311797.0017976938820245151600000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAA........................................................................................................................231830.008302144381068318410020
.....................................................................................................................................................................................AAGGCACGCGGTGAATGCCA..........................................................................................................................201568.0056803693933212410000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCG..........................................................................................................................211566.0056673101110443100000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAT........................................................................................................................231267.00267051468386910000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAC.........................................................................................................................221215.002150462202310500100
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGA.......................................................................................................................241189.0018916522329600000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAC........................................................................................................................231168.0016800129492510000
....................................................................................................................................................................................TAAGGCACGCGGTGAATG.............................................................................................................................181163.0016323634610120000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGT.......................................................................................................................241157.0015711677255510000
.................................................................................................................................................TGGTATCCACTGTAGGCCTATATG..........................................................................................................................................................241150.0015017480318910000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAT.........................................................................................................................221139.00139011114397310000
..................................................................................................................................................GGTATCCACTGTAGGCCTATA............................................................................................................................................................211106.0010614072200000000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCT...........................................................................................................................201100.0010001111226410000
.....................................................................................................................................................................................AAGGCACGCGGTGAATGCC...........................................................................................................................19198.0098046121102900000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCA...........................................................................................................................20175.00750130244700000
..................................................................................................................................................GGTATCCACTGTAGGCCTATAT...........................................................................................................................................................22159.005915027170000000
.....................................................................................................................................................................................AAGGCACGCGGTGAATGCCAA.........................................................................................................................21158.00580202072900000
......................................................................................................................................................................................AGGCACGCGGTGAATGCCA..........................................................................................................................19153.00530234061910000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAG.........................................................................................................................22149.0049032593000000
.....................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAG........................................................................................................................22139.00392129331000000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCATT........................................................................................................................23123.0023013081100000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCACA........................................................................................................................23121.0021002321400000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCG...........................................................................................................................20121.0021000051600000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGC.......................................................................................................................24118.0018001402200000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGA............................................................................................................................19118.0018010071000000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCTT..........................................................................................................................21118.0018001001700000
..................................................................................................................................................GGTATCCACTGTAGGCCTATATGT.........................................................................................................................................................24117.001761820000000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCAC..........................................................................................................................21117.0017000141200000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGT............................................................................................................................19115.0015000031200000
droEug1
ACTTCCG------------CTGTTA---TGCA--ATGA-GTAAACCCCAAG---------------------------------------------------TGCC------------CT-TTGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAA------TTACTCAGATCT-------CAA----------CTTTAAAGAAATAGTGTTAAAA----------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
AGCTT---------------TGTTA---TGCA--ATGA-GTAAAGTCCAAG---------------------------------------------------TGTC------------CT-CCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAA------TTACTCATA-CC-------CAG----------GAACCAACAAAAAGTGTTCAGA-AGC-----------------------------------CSizeHit CountTotal NormTotal
No Reads
droTak1
ACT----------------TCGTTA---TGCA--ATGA-GTTCAGCCCAAG---------------------------------------------------TGCC------------TT-TCGTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATCTCTACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAA------TTACTCATA-AT-------TAT----------AAACAAACAAAAAGTGTTTAAC-A------------------------TCGTATACAATATTSizeHit CountTotal NormTotal
No Reads
droEle1
--CTTC---------AATGTCGTTA---TGCA--ATGA-GTAAAGCCCAAG---------------------------------------------------TGTT------------CC-TCTTCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGCTCTACAAG------TTACTCAAA-CAAAAAACAAAG----------CGACAAACAAAAAGTGTTTATA-AGG-----------------------------------CSizeHit CountTotal NormTotal
No Reads
droRho1
AGCCACA------------TCGTTA---TGCA--ATGA-GTAAAGCCCAAG---------------------------------------------------TGTT------------CC-TCTTGATTGGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAA------TTACTCAAA-GC-------AAA----------T-ATAAACAAAAAGTGCTTAAAAAGGC---------------------------------CTSizeHit CountTotal NormTotal
No Reads
droFic1
AC----G------------ACGTTA---TGCA--ATGA-GTAAAGCCCAAG---------------------------------------------------TGTT------------CG-CCATCATTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCCACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAGTTCTACAAA------TTACTCAAA-TC-------CAAGGAAGATAATTGAT----------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
GGTT-CA------------TAATTA---CGCA--ATGA-GGACCCCTGAAG---------------------------------------------------TGTA-------------------TATTTTGTACTGTTTTCTCCTGGTGTCCACTGTAGGCCTATATGTATTTCGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGCAATTCTACTGT------TTACTCA---------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
AGA----------------TGGTTA---TGCA--ATCG-CCTTGCCCAGAG---------------------------------------------------GCTT------------TT-GTGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTACAAA------CTACAA---------------A-TGACATA--TTAAAAATACAAA-------------------------------------ATATATATGATTSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCA..........................................................................................................................21186069.00860691689183029734073128346897
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCC...........................................................................................................................20150146.00501463541236471421188333415
....................................................................................................................................................................................TAAGGCACGCGGTGAATGC............................................................................................................................19137468.0037468156742323925033747
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAA.........................................................................................................................2214890.0048901396499322241351650
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAG........................................................................................................................2313791.003791218350341151661972
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCT..........................................................................................................................2112160.0021602551961371131
....................................................................................................................................................................................TAAGGCACGCGGTGAATG.............................................................................................................................181511.005118111725324
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCG..........................................................................................................................211445.0044553120711218
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCC..........................................................................................................................211442.00442014343490
..................................................................................................................................................GGTATCCACTGTAGGCCTATATG..........................................................................................................................................................231342.003427951752216
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCA...........................................................................................................................201323.00323010646252
.....................................................................................................................................................................................AAGGCACGCGGTGAATGCCA..........................................................................................................................201288.0028813010067180
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAA........................................................................................................................231211.002114382622103
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGT.......................................................................................................................241209.002093253514123
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGA.......................................................................................................................241193.001931290533116
....................................................................................................................................................................................TAAGGCACGCGGTGAATGA............................................................................................................................191192.00192000180174
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCT...........................................................................................................................201167.0016715077975
....................................................................................................................................................................................TAAGGCACGCGGTGAATGT............................................................................................................................191158.001585002310120
.................................................................................................................................................TGGTATCCACTGTAGGCCTATATG..........................................................................................................................................................241117.001171117426455
.....................................................................................................................................................................................AAGGCACGCGGTGAATGCC...........................................................................................................................19199.0099219021246
.....................................................................................................................................................................................AAGGCACGCGGTGAATGC............................................................................................................................18180.008011001068
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAT........................................................................................................................23176.0076110119144
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAT.........................................................................................................................22173.007350137129
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAC.........................................................................................................................22162.006219239011
.....................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAG........................................................................................................................22151.0051272012010
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAC........................................................................................................................23141.004102011406
................................................................................................................................................CTGGTATCCACTGTAGGCCTATA............................................................................................................................................................23132.00321000130
.....................................................................................................................................................................................AAGGCACGCGGTGAATGCCAA.........................................................................................................................21129.00297301009
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAG.........................................................................................................................22129.00295002202
......................................................................................................................................................................................AGGCACGCGGTGAATGCCA..........................................................................................................................19127.00276008013
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCG...........................................................................................................................20127.00270008118
..................................................................................................................................................GGTATCCACTGTAGGCCTATA............................................................................................................................................................21121.00211530012
....................................................................................................................................................................................TAAGGCACGCGGTGAATT.............................................................................................................................18119.0019200908
......................................................................................................................................................................................AGGCACGCGGTGAATGCC...........................................................................................................................18118.00181007010
.................................................................................................................................................TGGTATCCACTGTAGGCCTATA............................................................................................................................................................22118.00180103014
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCATT........................................................................................................................23117.00170001106
..................................................................................................................................................GGTATCCACTGTAGGCCTATAT...........................................................................................................................................................22116.0016082105
....................................................................................................................................................................................TAAGGCACGCGGTGAATGG............................................................................................................................19114.00140003110
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCTT.........................................................................................................................22112.0012000606
....................................................................................................................................................................................TAAGGCACGCGGTGAATC.............................................................................................................................18112.00120001011
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCTG..........................................................................................................................21112.00120001101
droBip1
ACCGTCCTCCCATTCAAGATGGTTA---TGCA--ATCG-CCTCGCCCTGAG---------------------------------------------------GCTT------------TT-GTGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTACAAA------TCTC--AA-------------A-CGAC--------------------------------------------------------------ATATTSizeHit CountTotal NormTotal
No Reads
dp5
GCCTT----------------GT-----------ATGG-GGGA--TCC-----------------------------------------------------------ATTTTTCTCAGTGCTCGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCGACCATAAGGCACGCGGTGAATGCCAAGAGCGGACGAAACTCTACTATCAAAAACAGC---------------AAA-CGAC-----------GCCAAAAGTGTTTAAG-----------------------------------AAAATSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCA..........................................................................................................................21149140.004914033959211850993038344324580033
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAG........................................................................................................................23120538.002053803094457824654518555712610199
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCC...........................................................................................................................20113545.0013545169761663382075470215001
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAA.........................................................................................................................2217820.0078200331117237822703599190051
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGT.......................................................................................................................2411723.00172301103497267244021005
.................................................................................................................................................TGGTATCCACTGTAGGCCTATATG..........................................................................................................................................................2411271.0012711127281423461202000334
....................................................................................................................................................................................TAAGGCACGCGGTGAATGC............................................................................................................................191933.009330132404614252340010
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCT..........................................................................................................................211619.006192512193123545000
..................................................................................................................................................GGTATCCACTGTAGGCCTATATG..........................................................................................................................................................231610.00610116198619414020179
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGA.......................................................................................................................241593.0059305287252241714003
.....................................................................................................................................................................................AAGGCACGCGGTGAATGCCA..........................................................................................................................201502.00502034423751131000
.....................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAG........................................................................................................................221421.004210283162245512002
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCC..........................................................................................................................211295.0029502145232240000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGC.......................................................................................................................241210.00210046211912130000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAA........................................................................................................................231178.00178018582330432004
.....................................................................................................................................................................................AAGGCACGCGGTGAATGCC...........................................................................................................................191120.001200632400150000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAC........................................................................................................................231111.001110068236140000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCG..........................................................................................................................211110.00110016915790000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAC.........................................................................................................................22194.00940433155370000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAT........................................................................................................................23187.00870423266280000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAT.........................................................................................................................22178.00780111237350001
....................................................................................................................................................................................TAAGGCACGCGGTGAATG.............................................................................................................................18169.0069013343382006
.....................................................................................................................................................................................AAGGCACGCGGTGAATGCCAA.........................................................................................................................21156.0056029345131001
.................................................................................................................................................TGGTATCCACTGTAGGCCTATAT...........................................................................................................................................................23151.0051031118710020
.................................................................................................................................................TGGTATCCACTGTAGGCCTATA............................................................................................................................................................22150.0050041012610008
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCATT........................................................................................................................23141.0041071160170000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCT...........................................................................................................................20138.0038021221120000
.................................................................................................................................................TGGTATCCACTGTAGGCCTA..............................................................................................................................................................20135.003506011240003
.....................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAGT.......................................................................................................................23134.0034012316120000
......................................................................................................................................................................................AGGCACGCGGTGAATGCCA..........................................................................................................................19133.003302300280000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGTT......................................................................................................................25132.0032042140120000
......................................................................................................................................................................................AGGCACGCGGTGAATGCCAAG........................................................................................................................21128.002801401760000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAG.........................................................................................................................22127.00270346680000
......................................................................................................................................................................................AGGCACGCGGTGAATGCCAAGT.......................................................................................................................22127.002704273101000
..................................................................................................................................................GGTATCCACTGTAGGCCTATA............................................................................................................................................................21125.002500701500003
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCA...........................................................................................................................20121.002102010171000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAATT.......................................................................................................................24120.002001211060000
.....................................................................................................................................................................................AAGGCACGCGGTGAATGC............................................................................................................................18119.001901008010000
.................................................................................................................................................TGGTATCCACTGTAGGCCTATATGA.........................................................................................................................................................25119.001902101100005
..................................................................................................................................................GGTATCCACTGTAGGCCTATATGA.........................................................................................................................................................24119.00190210800008
.................................................................................................................................................TGGTATCCACTGTAGGCCTAT.............................................................................................................................................................21116.00160511540000
..................................................................................................................................................GGTATCCACTGTAGGCCTATAT...........................................................................................................................................................22116.00160141610003
....................................................................................................................................................................................TAAGGCACGCGGTGAATGT............................................................................................................................19115.00150703041000
.................................................................................................................................................TGGTATCCACTGTAGGCCT...............................................................................................................................................................19113.00130301080001
......................................................................................................................................................................................AGGCACGCGGTGAATGCCAA.........................................................................................................................20111.00110500240000
.....................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAGA.......................................................................................................................23110.00100702010000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGG.......................................................................................................................24110.00100423010000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCACT........................................................................................................................2319.0090111060000
...................................................................................................................................................................................ATAAGGCACGCGGTGAATGCCAAG........................................................................................................................2419.0090900000000
......................................................................................................................................................................................AGGCACGCGGTGAATGCCAAGA.......................................................................................................................2219.0090411030000
..................................................................................................................................................GGTATCCACTGTAGGCCTAT.............................................................................................................................................................2018.0080410110001
......................................................................................................................................................................................AGGCACGCGGTGAATGCC...........................................................................................................................1817.0070303010000
.................................................................................................................................................TGGTATCCACTGTAGGCCTT..............................................................................................................................................................2017.0070400030000
droPer2
GCCTT----------------GT-----------ATGG-GGGA--TCC-----------------------------------------------------------ATTTTTCTCAGTGCTCGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTATATGTATTTCGACCATAAGGCACGCGGTGAATGCCAAGAGCGGACGAAACTCTACTATCAAAAACAGC---------------AAA-CGAC-----------GCCAAAAGTGTTTAAG-----------------------------------AAAATSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCA..........................................................................................................................21162853.006285384984992971831672458
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCC...........................................................................................................................20114609.00146091535852449033220
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAG........................................................................................................................23110994.00109942534750945675365181
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAA.........................................................................................................................2214506.00450615582592796134038
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGT.......................................................................................................................241955.009550171233057521
....................................................................................................................................................................................TAAGGCACGCGGTGAATGC............................................................................................................................191889.00889022121259955
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCT..........................................................................................................................211685.006850901605115
.................................................................................................................................................TGGTATCCACTGTAGGCCTATATG..........................................................................................................................................................241482.004822514621522272
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCC..........................................................................................................................211473.004730021932780
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGA.......................................................................................................................241389.00389011413922312
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCG..........................................................................................................................211251.00251011611880
.....................................................................................................................................................................................AAGGCACGCGGTGAATGCCA..........................................................................................................................201247.002470412831210
..................................................................................................................................................GGTATCCACTGTAGGCCTATATG..........................................................................................................................................................231192.001921353331191
.....................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAG........................................................................................................................221116.00116035233460
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAA........................................................................................................................231114.0011401355532
....................................................................................................................................................................................TAAGGCACGCGGTGAATG.............................................................................................................................181103.0010303219790
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAT.........................................................................................................................22197.009702141530
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAC.........................................................................................................................22185.008500143410
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAT........................................................................................................................23167.006701023430
.................................................................................................................................................TGGTATCCACTGTAGGCCTA..............................................................................................................................................................20153.005302021300
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAC........................................................................................................................23146.004600116290
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCA...........................................................................................................................20144.004400022220
.....................................................................................................................................................................................AAGGCACGCGGTGAATGCC...........................................................................................................................19138.003804011230
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCT...........................................................................................................................20131.00310009220
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCACT........................................................................................................................23131.00310006250
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGC.......................................................................................................................24128.002801010170
.................................................................................................................................................TGGTATCCACTGTAGGCCTATA............................................................................................................................................................22126.0026308960
.....................................................................................................................................................................................AAGGCACGCGGTGAATGCCAA.........................................................................................................................21126.00260401570
......................................................................................................................................................................................AGGCACGCGGTGAATGCCA..........................................................................................................................19125.00250209140
......................................................................................................................................................................................AGGCACGCGGTGAATGCCAAGT.......................................................................................................................22122.002200010120
.................................................................................................................................................TGGTATCCACTGTAGGCCT...............................................................................................................................................................19118.00180102150
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGTT......................................................................................................................25116.0016000790
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCATT........................................................................................................................23116.00160005110
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCAC..........................................................................................................................21116.0016000790
......................................................................................................................................................................................AGGCACGCGGTGAATGCCAAG........................................................................................................................21115.0015021660
....................................................................................................................................................................................TAAGGCACGCGGTGAATGT............................................................................................................................19114.00140002120
.................................................................................................................................................TGGTATCCACTGTAGGCCTATAT...........................................................................................................................................................23114.00140011030
.................................................................................................................................................TGGTATCCACTGTAGGCCTAT.............................................................................................................................................................21113.0013000760
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCTG..........................................................................................................................21113.00130001120
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGG.......................................................................................................................2419.009000180
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAG.........................................................................................................................2219.009000180
..................................................................................................................................................GGTATCCACTGTAGGCCTATA............................................................................................................................................................2118.008201140
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAATT.......................................................................................................................2418.008000521
.....................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAGT.......................................................................................................................2318.008020150
.................................................................................................................................................TGGTATCCACTGTAGGCC................................................................................................................................................................1818.008000170
......................................................................................................................................................................................AGGCACGCGGTGAATGCCAAGA.......................................................................................................................2217.007000250
droWil2
TGAATTG------------AC---A---TACA--TTTT-G----------G---------------------------------------------------AGTGCTTTATTCTC---A-GAGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGCAGGCCTATATGTTATTTGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAATTCTACAAA------AACC-AAAA-CG-------CAA----------AAATATAAAAATA----------------------------------------AAG-AAA-ASizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCA..........................................................................................................................21176943.007694349918907293438639439
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAA.........................................................................................................................22124092.00240928728063218781784
....................................................................................................................................................................................TAAGGCACGCGGTGAATGC............................................................................................................................19123262.002326229668534722735
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCC...........................................................................................................................20120630.0020630549245360221717259
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAG........................................................................................................................2315236.005236651423334711525
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAA........................................................................................................................231491.00491341377106
.....................................................................................................................................................................................AAGGCACGCGGTGAATGCCA..........................................................................................................................201309.00309117414786
....................................................................................................................................................................................TAAGGCACGCGGTGAATG.............................................................................................................................181291.0029146413264
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCA...........................................................................................................................201263.002630016256
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCT..........................................................................................................................211244.00244254712196
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAT........................................................................................................................231193.0019312113950
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCG..........................................................................................................................211158.00158132126116
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGT.......................................................................................................................241123.001234503579
....................................................................................................................................................................................TAAGGCACGCGGTGAATGA............................................................................................................................191110.001100002108
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCC..........................................................................................................................21198.00983002867
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGA.......................................................................................................................24181.00811613241
..................................................................................................................................................GGTATCCACTGCAGGCCTATATG..........................................................................................................................................................23176.007638120206
.....................................................................................................................................................................................AAGGCACGCGGTGAATGCCAA.........................................................................................................................21156.00560200306
.....................................................................................................................................................................................AAGGCACGCGGTGAATGCC...........................................................................................................................19152.00520210229
.....................................................................................................................................................................................AAGGCACGCGGTGAATGC............................................................................................................................18147.0047050339
.....................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAG........................................................................................................................22142.004211301711
....................................................................................................................................................................................TAAGGCACGCGGTGAATGT............................................................................................................................19137.0037011035
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAC.........................................................................................................................22136.00360102411
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAT.........................................................................................................................22136.0036410823
......................................................................................................................................................................................AGGCACGCGGTGAATGCCA..........................................................................................................................19136.00360911511
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCT...........................................................................................................................20125.0025003517
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAC........................................................................................................................23121.0021000138
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAG.........................................................................................................................22119.0019210115
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCG...........................................................................................................................20113.0013000013
....................................................................................................................................................................................TAAGGCACGCGGTGAATCA............................................................................................................................1927.5015000114
.................................................................................................................................................TGGTATCCACTGCAGGCCTATATG..........................................................................................................................................................2417.00711050
....................................................................................................................................................................................TAAGGCACGCGGTGAATGG............................................................................................................................1916.00610005
......................................................................................................................................................................................AGGCACGCGGTGAATGCCAAG........................................................................................................................2115.00500050
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAATT.......................................................................................................................2415.00500041
droVir3
AGTTCCG------------GT--------------------------TTGGTGTTT---TTGA----TGTCCTGC---CAACATTCAGGACAACATT---CGTGAG------------TG-CCGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTCTATGAATTTTGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTACAAT------TAACAAAAA-----------------------------------------------------------------------TAACAAAC-GA---SizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCA..........................................................................................................................211126422.001264229813934141511807030000172509625480897771020349926159781836411022191561105022811501000010111743512111108028224428012111016000020012
..................................................................................................................................................GGTATCCACTGTAGGCCTCTATG..........................................................................................................................................................23160381.0060381156123753020000000000104451100700000000000020000273641746228942483321761433960744958023827523243342852211401135615434000131331263511000701982106785
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCC...........................................................................................................................20119738.00197385102620533000401100012199154539751341657119511694000000200000002000000000000000110291298886524600001109005000165
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAA.........................................................................................................................2219515.009515174155521200000000121293038569848938518211133000013203106262313000100030025125710110122135419313500100001000020001
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCC..........................................................................................................................2113666.003666071400000000003832421252644132860148811900000000000000000000000000000000000114319000000000000000000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGC............................................................................................................................1912407.002407081122800010000008579426997390103117000000000000000000000000000000000011315654500000000002001405
.................................................................................................................................................TGGTATCCACTGTAGGCCTCTATG..........................................................................................................................................................2412306.0023060100190000000000100100012000000000000000001244310382119244182264218154213138171311450911000028000000210674
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAG........................................................................................................................2311958.00195855106151000000000022513177166938401852760000000000000110000000100331412612710121832751000000100000000002
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCT..........................................................................................................................211977.009770152770001000000397231425215098800000000000000000000000000000000000010491600000000000000000
.....................................................................................................................................................................................AAGGCACGCGGTGAATGCCA..........................................................................................................................201544.005440036780000000000201341413403030000000000000000000000000000000000000041000000000000000000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAA........................................................................................................................231531.005310014290000000000675030662535048770010001000001110000000000000201300031362100000000000000000
..................................................................................................................................................GGTATCCACTGTAGGCCTCTA............................................................................................................................................................211260.00260214114000000000000011000000000000000000100000001779341137191219130103810000001400000011100
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCG..........................................................................................................................211211.00211067200000000009251443015200000000000000000000000000000000000003112000000000000000000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAT........................................................................................................................231206.00206006250000000000411732210502327000000000000000000000000000001000000518200000000010000000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAT.........................................................................................................................221198.00198001620000000000281471217902931000000000000000000000000000000000000032100000000000000000
..................................................................................................................................................GGTATCCACTGTAGGCCTCTAT...........................................................................................................................................................221168.001681102400000000000101000020000000001001000000010931196201984100003142100010001000001121
....................................................................................................................................................................................TAAGGCACGCGGTGAATG.............................................................................................................................181144.001440011100000000008109117701212000000000000000000000000000000000001152000000000000001100
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAC.........................................................................................................................221126.00126003130000000000196311990166000000000000000000000000000000000000525100000000000000000
..................................................................................................................................................GGTATCCACTGTAGGCCTCTATA..........................................................................................................................................................231111.0011100010000000000000000000000000000000000000000110691671569570001710000000100000000000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGA.......................................................................................................................24184.00840054000000000098293100416000000000000000000000000000010000000013000000000000000000
.....................................................................................................................................................................................AAGGCACGCGGTGAATGCC...........................................................................................................................19183.0083015210000000000021241042000000000000000000000000000000000000112000000000000000000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGT.......................................................................................................................24173.00730041200000000001051714038000000000000001000000000000000000000116000000000000000000
..................................................................................................................................................GGTATCCACTGTAGGCCTCT.............................................................................................................................................................20164.006401406000000000000011000100000000000000000001000013025324000522000003201000013001
.....................................................................................................................................................................................AAGGCACGCGGTGAATGCCAA.........................................................................................................................21162.006200406000000000040001303100000000000000000000000000000000000013000000000000000000
..................................................................................................................................................GGTATCCACTGTAGGCCTCTATT..........................................................................................................................................................23160.006009000000000000000010000000000000000000000000001041403440009190000000100000000000
..................................................................................................................................................GGTATCCACTGTAGGCCTCTATGA.........................................................................................................................................................24155.005500020000000000000000000000000000000000000000024094108522100500000000000000000100
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCATT........................................................................................................................23150.005000300000000000850542011700000000000000000000000000000000000004100000000000000000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCA...........................................................................................................................20149.004900000000000000520300023000000000000000000000000000000000000033000000000000000001
......................................................................................................................................................................................AGGCACGCGGTGAATGCCA..........................................................................................................................19145.0045002100000000000400111033000000000000000000000000000000000000011000000000000000000
..................................................................................................................................................GGTATCCACTGTAGGCCT...............................................................................................................................................................18138.003801900000000000000000000000000000000000000000000023305120000300000000000000000000
..........................................................................................................................................................CTGTAGGCCTCTATG..........................................................................................................................................................15136.00360000000000000000000000000000000000000000000002123253044010900000000000000000000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAG.........................................................................................................................22136.00360083000000000012121203600000000000000000000000000000001000015000000000000000000
.....................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAG........................................................................................................................22136.003600108000000000033021003300000000000000000000000000000010000110000000000000000000
..................................................................................................................................................GGTATCCACTGTAGGCCTCTATGT.........................................................................................................................................................24134.00340301000000000000000000000000000000000000000002103226022000900000000000000000100
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAC........................................................................................................................23131.00310019000000000030032201200000000000010000000000000000000000114000000100000000000
..................................................................................................................................................GGTATCCACTGTAGGCCTCTATC..........................................................................................................................................................23129.00290101000000000000000000000000000000000000000000052282221000300000000000000000000
..................................................................................................................................................GGTATCCACTGTAGGCCTCTATAT.........................................................................................................................................................24122.00220000000000000000000000000000000000000000000002030432103000400000000000000000000
...................................................................................................................................................................................ATAAGGCACGCGGTGAATGCCA..........................................................................................................................22121.002100180000000000000010100100000000000000000000000000000000000000000000000000000000
......................................................................................................................................................TCCACTGTAGGCCTCTATG..........................................................................................................................................................19120.002001700000000000000000000000000000000000000000000000001010000100000000000000000000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAATT.......................................................................................................................24118.00180002000000000051013002200000000000000000000000000000000000101000000000000000000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCT...........................................................................................................................20117.001700010000000000100010011000000000000000000000000000000000000012000000000000000000
.....................................................................................................................................................................................AAGGCACGCGGTGAATGC............................................................................................................................18114.00140080000000000002000000000000000000000000000000000000000000004000000000000000000
.......................................................................................................................................................CCACTGTAGGCCTCTATG..........................................................................................................................................................18113.001301000000000000000000000000000000000000000000000100010000000100000000000000000000
.................................................................................................................................................TGGTATCCACTGTAGGCCTCTA............................................................................................................................................................22112.00120000000000000000000000000000000000000000000000112021030000100000000100000000000
....................................................................................................................................................TATCCACTGTAGGCCTCTATG..........................................................................................................................................................21111.00110400000000000000000000000000000000000000000000000110000201200000000000000000000
.................................................................................................................................................TGGTATCCACTGTAGGCCTCTAT...........................................................................................................................................................23111.00110000000000000000100100100000000000010000000001100101001000110000000000000000000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGT............................................................................................................................19111.00110010000000000000000000000000000000000000000000000000000000019000000000000000000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCAC..........................................................................................................................21110.00100000000000000010000001000000000000000000000000000000000000017000000000000000000
....................................................................................................................................................................................TAAGGCACGCGGTGAAT..............................................................................................................................1719.0090000000000000000000000000000000000000000000000000000000000104000000100000010020
.................................................................................................................................................TGGTATCCACTGTAGGCCTCT.............................................................................................................................................................2119.0090200000000000000102000100000000000100000000000000001000000001000000000000000000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCATTT.......................................................................................................................2419.0090000000000000001220001200000000000000000000000000000000000001000000000000000000
....................................................................................................................................................................................TAAGGCACGCGGTGAATGA............................................................................................................................1919.0090010000000000001000000100000000000000000000000000000000000006000000000000000000
droMoj3
TGCTTTG--------CATCTCATTA---CGCA--AGTT-CC---GGTTTG-TGCGTCAATCGACAATTGCCCTGCGCTCAGCGTGCGGGAC-----TCGCCGTGAG------------TG-ACGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTCTATGAATTTTGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTACAAA------ATCC----------------AA----------CAAGCGAC-----------------------------------------------------CSizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCA..........................................................................................................................211148445.0014844556403768316744978456696883
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAA.........................................................................................................................22149537.00495376843483181329034057975
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCC...........................................................................................................................20133691.003369164426210559150926791343
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAG........................................................................................................................2319441.009441309488600926708830
..................................................................................................................................................GGTATCCACTGTAGGCCTCTATG..........................................................................................................................................................2315658.0056589704232748878
....................................................................................................................................................................................TAAGGCACGCGGTGAATGC............................................................................................................................1914792.004792128916912282549133
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCT..........................................................................................................................2112286.00228654684713284011
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAA........................................................................................................................2311720.0017201480508714872
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAT........................................................................................................................2311224.0012241614396610890
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCC..........................................................................................................................211996.00996045663270180
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAC.........................................................................................................................221977.0097731633259000
.....................................................................................................................................................................................AAGGCACGCGGTGAATGCCA..........................................................................................................................201961.00961518537703292
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAC........................................................................................................................231402.0040219163850
.................................................................................................................................................TGGTATCCACTGTAGGCCTCTATG..........................................................................................................................................................241367.00367261652921
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGT.......................................................................................................................241362.003627730612534
.....................................................................................................................................................................................AAGGCACGCGGTGAATGCCAA.........................................................................................................................211355.00355685362730
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCG..........................................................................................................................211347.0034721194165741
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAT.........................................................................................................................221289.0028940445901091
....................................................................................................................................................................................TAAGGCACGCGGTGAATG.............................................................................................................................181238.0023810683125113
..................................................................................................................................................GGTATCCACTGTAGGCCTCTAT...........................................................................................................................................................221188.00188019011680
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGA.......................................................................................................................241147.001471341448671
.....................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAG........................................................................................................................221128.0012832444840
.....................................................................................................................................................................................AAGGCACGCGGTGAATGCC...........................................................................................................................191109.00109550219330
..................................................................................................................................................GGTATCCACTGTAGGCCTCTA............................................................................................................................................................211108.0010803001050
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCT...........................................................................................................................20196.0096003643170
..................................................................................................................................................GGTATCCACTGTAGGCCTCT.............................................................................................................................................................20194.00940500890
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCA...........................................................................................................................20170.007012204223
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCATT........................................................................................................................23164.006470113790
......................................................................................................................................................................................AGGCACGCGGTGAATGCCA..........................................................................................................................19163.00631901117151
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAATT.......................................................................................................................24161.00611047490
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAG.........................................................................................................................22151.005186611200
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGC.......................................................................................................................24142.00420111390
....................................................................................................................................................................................TAAGGCACGCGGTGAATGT............................................................................................................................19141.004100112703
..................................................................................................................................................GGTATCCACTGTAGGCCTCTATGA.........................................................................................................................................................24137.00370000370
..................................................................................................................................................GGTATCCACTGTAGGCCTCTAC...........................................................................................................................................................22126.00260000260
..................................................................................................................................................GGTATCCACTGTAGGCCTCC.............................................................................................................................................................20123.00230000230
......................................................................................................................................................................................AGGCACGCGGTGAATGCCAA.........................................................................................................................20123.00232101190
.................................................................................................................................................TGGTATCCACTGTAGGCCTCTAT...........................................................................................................................................................23122.002201001110
.....................................................................................................................................................................................AAGGCACGCGGTGAATGC............................................................................................................................18121.00211501230
..................................................................................................................................................GGTATCCACTGTAGGCCTCTATT..........................................................................................................................................................23121.00210611130
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAAT.......................................................................................................................24120.00200000200
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCACT........................................................................................................................23119.00190041140
...................................................................................................................................................................................ATAAGGCACGCGGTGAATGCCA..........................................................................................................................22118.00181201320
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCTT..........................................................................................................................21117.00170071000
..................................................................................................................................................GGTATCCACTGTAGGCCTCTATGT.........................................................................................................................................................24117.00170300131
droGri2
--------------------------------------------------G---------------------------------------------------TGTG------------TG-CCGTCGTTTGGTACGTTTTTCTCCTGGTATCCACTGTAGGCCTCTATGTTTTTTGACCATAAGGCACGCGGTGAATGCCAAGAGCGAACGAAACTCTACACT------TC-----CA-TT-------CAA----------ATATAACCAGCAA-------------------------------------------------SizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCA..........................................................................................................................211652.0065258765
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAG........................................................................................................................231164.0016415014
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAA.........................................................................................................................22189.0089809
.....................................................................................................................................................................................AAGGCACGCGGTGAATGCCA..........................................................................................................................20167.0067670
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCC...........................................................................................................................20149.0049454
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGA.......................................................................................................................24110.001082
.....................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAG........................................................................................................................2218.00880
......................................................................................................................................................................................AGGCACGCGGTGAATGCCA..........................................................................................................................1916.00660
.....................................................................................................................................................................................AAGGCACGCGGTGAATGCCAA.........................................................................................................................2115.00550
...................................................................................................................................................................................ATAAGGCACGCGGTGAATGCCA..........................................................................................................................2215.00550
.................................................................................................................................................TGGTATCCACTGTAGGCCTCTATG..........................................................................................................................................................2415.00523
.....................................................................................................................................................................................AAGGCACGCGGTGAATGCC...........................................................................................................................1915.00550
....................................................................................................................................................................................TAAGGCACGCGGTGAATGC............................................................................................................................1913.00321
..................................................................................................................................................GGTATCCACTGTAGGCCTCTATG..........................................................................................................................................................2313.00321
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAT........................................................................................................................2313.00330
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGT.......................................................................................................................2413.00330
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAA........................................................................................................................2312.00220
.................................................................................................................................................TGGTATCCACTGTAGGCCTCTAT...........................................................................................................................................................2312.00211
.....................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAGA.......................................................................................................................2312.00220
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAC.........................................................................................................................2212.00220
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAAT.......................................................................................................................2411.00110
...................................................................................................................................................................................ATAAGGCACGCGGTGAATGCCAAT........................................................................................................................2411.00110
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAC........................................................................................................................2311.00101
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAG.........................................................................................................................2211.00110
...................................................................................................................................................................................ATAAGGCACGCGGTGAATGCCAAG........................................................................................................................2411.00110
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCT..........................................................................................................................2111.00110
.....................................................................................................................................................................................AAGGCACGCGGTGAATGCCAAGCT......................................................................................................................2411.00110
.....................................................................................................................................................................................AAGGCACGCGGTGAATGC............................................................................................................................1811.00110
................................................................................................................................................CTGGTATCCACTGTAGGCCTCT.............................................................................................................................................................2211.00110
....................................................................................................................................................................................TAAGGCACGCGGTGAATGCCAAGG.......................................................................................................................2411.00110

Generated: 10/20/2015 at 10:20 PM