ID:

dse-mir-10

 Coordinate:

scaffold_6:2726449-2726525 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

3pUTR

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-33.7 -33.4 -33.1

Flybase annnotation

pre_miRNA [Dsec\mir-10-RM]; utr3 [utr3_minus_6887]; miRNA [Dsec\miR-10-RA]

No Repeatable elements found

Sense Strand Reads

TGCCCAGCGGAGTTCATTTCGCCCCAGCGACTGTTCCTCATCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGCTTTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATCGAAAAAGTGTAGCTGATGGCAAGCGATAAAGTGATTT

*******************************************..(((..(((((...(((((.((((.(((((((((((((............))))))))))))).)))).)).)))...)))))..)))....***************************************** 		Read size # Mismatch Hit Count Total Norm Total V113

male body		 M054

female body

 V114

embryo

 V115

head
..........................................................ACCCTGTAGATCCGAATTTGTT................................................................................................. 22 0 1 161175.00 161175 77073 35307 38909 9886
..................................................................................................CAAATTCGGTTCTAGAGAGGTTT........................................................ 23 0 1 97296.00 97296 37344 36086 19707 4159
..................................................................................................CAAATTCGGTTCTAGAGAGGTT......................................................... 22 0 1 19300.00 19300 9706 6131 2042 1421
..........................................................ACCCTGTAGATCCGAATTTGT.................................................................................................. 21 0 1 14501.00 14501 8806 3685 897 1113
..................................................................................................CAAATTCGGTTCTAGAGAGGT.......................................................... 21 0 1 12774.00 12774 6992 3397 1592 793
..................................................................................................CAAATTCGGTTCTAGAGAGG........................................................... 20 0 1 5074.00 5074 2945 1330 253 546
...........................................................CCCTGTAGATCCGAATTTGTT................................................................................................. 21 0 1 3466.00 3466 24 3420 16 6
...................................................................................................AAATTCGGTTCTAGAGAGGTTT........................................................ 22 0 1 3265.00 3265 284 2838 119 24
..................................................................................................CAAATTCGGTTCTAGAGAGGTTTT....................................................... 24 1 1 2161.00 2161 1485 327 190 159
..........................................................ACCCTGTAGATCCGAATTTGTTT................................................................................................ 23 0 1 1749.00 1749 1046 354 193 156
..........................................................ACCCTGTAGATCCGAATTTG................................................................................................... 20 0 1 1605.00 1605 793 643 54 115
..................................................................................................CAAATTCGGTTCTAGAGAGGGTT........................................................ 23 1 1 811.00 811 46 758 6 1
..........................................................ACCCTGTAGATCCGAATTCGTT................................................................................................. 22 1 1 685.00 685 648 6 24 7
..................................................................................................CAACTTCGGTTCTAGAGAGGTTT........................................................ 23 1 1 545.00 545 328 193 18 6
...................................................................................................AAATTCGGTTCTAGAGAGGTT......................................................... 21 0 1 534.00 534 53 462 13 6
..........................................................ACCCTGTAGATCCGAATTAGTT................................................................................................. 22 1 1 524.00 524 517 1 2 4
..................................................................................................CAAATTCGGTTCTAGAGATGTTT........................................................ 23 1 1 402.00 402 214 149 33 6
..........................................................ACCCTGTAGATCCGAATTTTTT................................................................................................. 22 1 1 388.00 388 55 261 57 15
..................................................................................................CAAATTCGGTTCTAGAGAG............................................................ 19 0 1 385.00 385 144 132 69 40
..........................................................ACCCTGTAGATCCGAATTTGGT................................................................................................. 22 1 1 374.00 374 14 352 7 1
...........................................................CCCTGTAGATCCGAATTTGT.................................................................................................. 20 0 1 372.00 372 6 366 0 0
..........................................................ATCCTGTAGATCCGAATTTGTT................................................................................................. 22 1 1 352.00 352 32 43 275 2
..........................................................ACCCTGTAGATCCGACTTTGTT................................................................................................. 22 1 1 343.00 343 241 5 88 9
..................................................................................................CAAATTCGGTTCTAGAGAGTTTT........................................................ 23 1 1 333.00 333 27 264 35 7
..................................................................................................CAAATTCGGTTCTAGAGAAGTTT........................................................ 23 1 1 317.00 317 273 9 29 6
...................................................................................................AAATTCGGTTCTAGAGAGGT.......................................................... 20 0 1 311.00 311 34 266 6 5
..................................................................................................CAAATTCGGTTCTAGAGACGTTT........................................................ 23 1 1 290.00 290 248 30 8 4
..........................................................ACCCTGTAGATCCGAATTGGTT................................................................................................. 22 1 1 272.00 272 224 42 5 1
..........................................................ACCCTGTAGATCTGAATTTGTT................................................................................................. 22 1 1 265.00 265 46 15 193 11
..........................................................ACCCTGTAGATCCAAATTTGTT................................................................................................. 22 1 1 258.00 258 71 102 76 9
....................................................................................................AATTCGGTTCTAGAGAGGTTT........................................................ 21 0 1 239.00 239 30 199 10 0
..........................................................ACCATGTAGATCCGAATTTGTT................................................................................................. 22 1 1 224.00 224 15 178 10 21
..................................................................................................CAAATTCGTTTCTAGAGAGGTTT........................................................ 23 1 1 218.00 218 36 155 23 4
..................................................................................................CAAATTCTGTTCTAGAGAGGTTT........................................................ 23 1 1 203.00 203 35 125 34 9
..........................................................ACCCTGTAGATCCGAATTTGTC................................................................................................. 22 1 1 190.00 190 102 25 54 9
..........................................................ACCCTGTAGATCCGAATTTGCT................................................................................................. 22 1 1 186.00 186 119 12 45 10
..................................................................................................CAAATTCGGTTCTAGAGAGGTTTA....................................................... 24 1 1 178.00 178 63 66 36 13
..................................................................................................CAAATTTGGTTCTAGAGAGGTTT........................................................ 23 1 1 178.00 178 19 22 133 4
..........................................................ACCCCGTAGATCCGAATTTGTT................................................................................................. 22 1 1 177.00 177 75 45 52 5
..................................................................................................CAAATTAGGTTCTAGAGAGGTTT........................................................ 23 1 1 177.00 177 11 155 3 8
............................................................CCTGTAGATCCGAATTTGTT................................................................................................. 20 0 1 176.00 176 20 132 23 1
..........................................................ACCCTGTAGACCCGAATTTGTT................................................................................................. 22 1 1 175.00 175 85 23 60 7
..........................................................ACCCTGTAGATTCGAATTTGTT................................................................................................. 22 1 1 171.00 171 14 83 67 7
..........................................................ACCCTGTAGATCCGATTTTGTT................................................................................................. 22 1 1 169.00 169 33 71 65 0
..........................................................ACCCTGTAGATCCGAAATTGTT................................................................................................. 22 1 1 168.00 168 36 6 117 9
..................................................................................................CAAATTCGGCTCTAGAGAGGTTT........................................................ 23 1 1 167.00 167 59 59 44 5
..........................................................ACCCTGTAGATCCGAATTTGTTA................................................................................................ 23 1 1 165.00 165 72 60 28 5
..........................................................ACCCTGCAGATCCGAATTTGTT................................................................................................. 22 1 1 159.00 159 80 33 37 9
..................................................................................................CAAATTCGGTTCTAGAGAGTTT......................................................... 22 1 1 158.00 158 21 108 26 3
...................................................................................................CAATTCGGTTCTAGAGAGGTTT........................................................ 22 1 1 158.00 158 23 21 113 1
..........................................................ACCTTGTAGATCCGAATTTGTT................................................................................................. 22 1 1 155.00 155 28 23 99 5
..........................................................ACCCTGTATATCCGAATTTGTT................................................................................................. 22 1 1 147.00 147 44 44 45 14
..........................................................ACCCTGTAGATCCGATTTGTT.................................................................................................. 21 3 2 144.00 288 20 8 256 4
..........................................................ACTCTGTAGATCCGAATTTGTT................................................................................................. 22 1 1 141.00 141 29 20 86 6
..................................................................................................TAAATTCGGTTCTAGAGAGGTTT........................................................ 23 1 1 136.00 136 12 89 33 2
..................................................................................................CAAATTCGGTTTTAGAGAGGTTT........................................................ 23 1 1 133.00 133 5 76 50 2
..........................................................ACCCTGTGGATCCGAATTTGTT................................................................................................. 22 1 1 130.00 130 59 5 53 13
..................................................................................................CAAATTCGGTTCTAGAGCGGTTT........................................................ 23 1 1 129.00 129 11 110 8 0
..................................................................................................CAAATTCGGTTCTAGAGAGGCTT........................................................ 23 1 1 129.00 129 87 12 21 9
..........................................................ACCCTGTAGGTCCGAATTTGTT................................................................................................. 22 1 1 127.00 127 70 10 40 7
..................................................................................................CAAATTCGGGTCTAGAGAGGTTT........................................................ 23 1 1 125.00 125 17 104 4 0
..........................................................ACCCTGTACATCCGAATTTGTT................................................................................................. 22 1 1 125.00 125 44 53 20 8
..................................................................................................CAAATTCGGTTCTAGAGAGGGT......................................................... 22 1 1 123.00 123 10 112 1 0
..........................................................GCCCTGTAGATCCGAATTTGTT................................................................................................. 22 1 1 119.00 119 54 16 36 13
..................................................................................................CAAATTCGGTTCTAGAGAGGG.......................................................... 21 1 1 119.00 119 4 113 2 0
..................................................................................................CAAATTCGGTTCTAGAGAGGTA......................................................... 22 1 1 118.00 118 72 35 2 9
...................................................................................................AAATTCGGTTCTAGAGAGG........................................................... 19 0 1 117.00 117 21 95 0 1
..........................................................ACCCTGTAGATCCGCATTTGTT................................................................................................. 22 1 1 110.00 110 71 1 33 5
..................................................................................................CAACTTCGGTTCTAGAGAGGTT......................................................... 22 1 1 110.00 110 73 30 4 3
..........................................................ACCCTGTAGATCCGAATTTCTT................................................................................................. 22 1 1 104.00 104 48 18 29 9
..........................................................ACCCTTTAGATCCGAATTTGTT................................................................................................. 22 1 1 104.00 104 36 40 19 9
..................................................................................................CAAATTCGGTTCTAGAGAGGTTTTT...................................................... 25 1 1 103.00 103 87 8 5 3
..................................................................................................CAAATTCGGTTCTAGATAGGTTT........................................................ 23 1 1 103.00 103 16 68 15 4
..........................................................ACCCTGAAGATCCGAATTTGTT................................................................................................. 22 1 1 102.00 102 15 68 8 11
..................................................................................................CAAATTCGGTCCTAGAGAGGTTT........................................................ 23 1 1 97.00 97 44 21 29 3
..........................................................ACCCTGTAGATCCGAATCTGTT................................................................................................. 22 1 1 91.00 91 58 8 18 7
..................................................................................................CAAATTCGGTTCTAGAGGTTT.......................................................... 21 3 2 91.00 182 38 66 75 3
..................................................................................................CAAATTCGGTTCTATAGAGGTTT........................................................ 23 1 1 91.00 91 12 67 9 3
..........................................................ACCCTGTAGATCCGAACTTGTT................................................................................................. 22 1 1 90.00 90 56 4 27 3
..........................................................TCCCTGTAGATCCGAATTTGTT................................................................................................. 22 1 1 90.00 90 1 83 6 0
..........................................................ACCCTGTAGATCCTAATTTGTT................................................................................................. 22 1 1 86.00 86 23 42 13 8
..................................................................................................CAAATTCAGTTCTAGAGAGGTTT........................................................ 23 1 1 84.00 84 29 35 17 3
..........................................................ACCCTGTAGATCCGAATTT.................................................................................................... 19 0 1 84.00 84 11 44 14 15
..........................................................ACCCTGTAGATCCGAATTGTT.................................................................................................. 21 2 1 84.00 84 19 7 58 0
..................................................................................................CAACTTCGGTTCTAGAGAGGT.......................................................... 21 1 1 84.00 84 60 21 2 1
..........................................................ACCCTGTAGATCCCAATTTGTT................................................................................................. 22 1 1 84.00 84 35 5 43 1
..................................................................................................CAAATTCGGTTCTAGGGAGGTTT........................................................ 23 1 1 83.00 83 39 18 24 2
..................................................................................................CGAATTCGGTTCTAGAGAGGTTT........................................................ 23 1 1 83.00 83 30 36 16 1
...........................................................CCCTGTAGATCCGAATTTGTTT................................................................................................ 22 0 1 80.00 80 17 43 13 7
..........................................................ACCCTGTAGATCCGAATTCGT.................................................................................................. 21 1 1 79.00 79 75 1 2 1
..........................................................ACCCTGTAGATCCGAGTTTGTT................................................................................................. 22 1 1 79.00 79 48 4 23 4
.........................................................TACCCTGTAGATCCGAATTTGT.................................................................................................. 22 0 1 77.00 77 37 18 13 9
..................................................................................................CAAACTCGGTTCTAGAGAGGTTT........................................................ 23 1 1 76.00 76 23 32 18 3
..................................................................................................CAAATTCGGTTCTAGAGGGGTTT........................................................ 23 1 1 75.00 75 30 15 26 4
..................................................................................................CAAATTCGGTTCTAGTGAGGTTT........................................................ 23 1 1 75.00 75 10 58 7 0
..........................................................ACCCTGTAGATCCGAATTTTT.................................................................................................. 21 1 1 75.00 75 8 59 7 1
..................................................................................................CAAATTCGGTTCTAGAGAGGTTC........................................................ 23 1 1 74.00 74 33 17 21 3
..................................................................................................CAAATTCCGTTCTAGAGAGGTTT........................................................ 23 1 1 74.00 74 26 37 2 9
..................................................................................................CAAATTCGGTTCTAGAGAAGTT......................................................... 22 1 1 72.00 72 67 2 1 2
..........................................................ACCCTGTAGATCCGGATTTGTT................................................................................................. 22 1 1 72.00 72 36 13 21 2
..................................................................................................CAAATTCGGTTCTAGAGACGTT......................................................... 22 1 1 71.00 71 67 3 0 1
...........................................................CCCTGTAGATCCGAATTTG................................................................................................... 19 0 1 71.00 71 0 71 0 0
..................................................................................................CACATTCGGTTCTAGAGAGGTTT........................................................ 23 1 1 70.00 70 53 1 12 4
..........................................................AGCCTGTAGATCCGAATTTGTT................................................................................................. 22 1 1 70.00 70 13 50 7 0
..................................................................................................CAAATTCGGTTCCAGAGAGGTTT........................................................ 23 1 1 69.00 69 36 12 18 3
..................................................................................................CAAATTCGGTTCTAGACAGGTTT........................................................ 23 1 1 68.00 68 33 21 11 3
................................................................................TTATACTAGCTTTAAGGA............................................................................... 18 0 1 66.00 66 0 0 65 1
..........................................................ACCCTCTAGATCCGAATTTGTT................................................................................................. 22 1 1 66.00 66 44 3 13 6
..................................................................................................CAAATTCGGTTCTAGAGA............................................................. 18 0 1 66.00 66 2 18 41 5
..................................................................................................CAAATTCGGTTCTAGAGAGGTTA........................................................ 23 1 1 65.00 65 23 27 10 5
..................................................................................................CAAATTCGGTTCTAGAGATGTT......................................................... 22 1 1 63.00 63 40 18 2 3
..................................................................................................CAAATTCGGTTCTGGAGAGGTTT........................................................ 23 1 1 62.00 62 23 16 20 3
..........................................................ACCCTGTCGATCCGAATTTGTT................................................................................................. 22 1 1 62.00 62 34 14 10 4
..........................................................ACACTGTAGATCCGAATTTGTT................................................................................................. 22 1 1 61.00 61 30 11 8 12
..................................................................................................CAAATTCGGTTCTAGAGACGT.......................................................... 21 1 1 61.00 61 58 3 0 0
..........................................................ACCCTGTAAATCCGAATTTGTT................................................................................................. 22 1 1 60.00 60 15 18 19 8
..........................................................ACCCTGTAGATCCGAATTTGG.................................................................................................. 21 1 1 60.00 60 0 60 0 0
.........................................................TACCCTGTAGATCCGAATTTGTT................................................................................................. 23 0 1 59.00 59 20 24 13 2
..........................................................ACCCTGTAGATCCGAATTAGT.................................................................................................. 21 1 1 59.00 59 59 0 0 0
..........................................................ACCCTGTAGCTCCGAATTTGTT................................................................................................. 22 1 1 58.00 58 39 0 18 1
..........................................................ACCCTGTAGATCAGAATTTGTT................................................................................................. 22 1 1 58.00 58 20 5 25 8
..................................................................................................CAAATTCGGTTCTAGAGAGGTCT........................................................ 23 1 1 58.00 58 26 9 19 4
.................................................................................................ACAAATTCGGTTCTAGAGAGGTTT........................................................ 24 0 1 58.00 58 8 38 9 3
..................................................................................................CCAATTCGGTTCTAGAGAGGTTT........................................................ 23 1 1 57.00 57 41 1 14 1
..................................................................................................CAGATTCGGTTCTAGAGAGGTTT........................................................ 23 1 1 56.00 56 16 19 17 4
..................................................................................................CAACTTCGGTTCTAGAGCGGTTT........................................................ 23 2 1 55.00 55 0 55 0 0
..........................................................ACCCTGTAGATCCGTATTTGTT................................................................................................. 22 1 1 54.00 54 2 42 9 1
..................................................................................................CAAATTCGGATCTAGAGAGGTTT........................................................ 23 1 1 54.00 54 7 36 9 2
..........................................................ACCCTATAGATCCGAATTTGTT................................................................................................. 22 1 1 54.00 54 23 10 14 7
..................................................................................................CAAATCCGGTTCTAGAGAGGTTT........................................................ 23 1 1 54.00 54 26 15 12 1
..................................................................................................CAAATTCGGTTCTAGAGAAGT.......................................................... 21 1 1 52.00 52 49 2 0 1
..................................................................................................CAAATTCGGTTCTAGAGATGT.......................................................... 21 1 1 50.00 50 30 16 2 2
..........................................................ACCCTGTAGATACGAATTTGTT................................................................................................. 22 1 1 50.00 50 24 4 16 6
..........................................................ACGCTGTAGATCCGAATTTGTT................................................................................................. 22 1 1 50.00 50 12 35 2 1
..................................................................................................CAAATTCGGTTCTAGAGAGGTTTG....................................................... 24 0 1 50.00 50 4 42 4 0
..................................................................................................CAAATTCGGTTCTTGAGAGGTTT........................................................ 23 1 1 49.00 49 9 28 12 0
.............................................................CTGTAGATCCGAATTTGTT................................................................................................. 19 0 1 48.00 48 12 29 6 1
..........................................................ACCCTGTAGATCCGAATTTATT................................................................................................. 22 1 1 48.00 48 12 20 8 8
...................................................................................................AAATTCGGTTCTAGAGAGGTTTT....................................................... 23 1 1 47.00 47 12 33 1 1
..........................................................ACCCTGTTGATCCGAATTTGTT................................................................................................. 22 1 1 47.00 47 13 4 29 1
..........................................................ACCCTGTAGATCCGAATT..................................................................................................... 18 0 1 46.00 46 0 15 26 5
..................................................................................................CAAATTCGGTTCTAGAGAGGATT........................................................ 23 1 1 45.00 45 25 14 4 2
..................................................................................................CAAATTCGGCTCTAGAGAGGTT......................................................... 22 1 1 45.00 45 27 15 3 0
..................................................................................................CAAATTCGCTTCTAGAGAGGTTT........................................................ 23 1 1 44.00 44 19 7 17 1
..................................................................................................CAAATTCGTTTCTAGAGAGGTT......................................................... 22 1 1 43.00 43 5 36 1 1
..........................................................ACCCTGTAGAACCGAATTTGTT................................................................................................. 22 1 1 42.00 42 8 9 23 2
..................................................................................................CAAATTCGATTCTAGAGAGGTTT........................................................ 23 1 1 42.00 42 14 15 10 3
..................................................................................................CAAATTCGGTTCTACAGAGGTTT........................................................ 23 1 1 41.00 41 20 5 15 1
..................................................................................................CAACTTCGGTTCTAGAGAGG........................................................... 20 1 1 41.00 41 31 10 0 0
..................................................................................................CAAGTTCGGTTCTAGAGAGGTTT........................................................ 23 1 1 41.00 41 21 8 12 0
..................................................................................................CAAATTCGGTTCTAGAGAGCTTT........................................................ 23 1 1 41.00 41 22 5 10 4
..........................................................ACCCTGTAGATCCGAATTTGTA................................................................................................. 22 1 1 40.00 40 14 18 4 4
..................................................................................................CTAATTCGGTTCTAGAGAGGTTT........................................................ 23 1 1 38.00 38 5 24 9 0
..........................................................ACCCTGTAGATCCGAATTTGTTG................................................................................................ 23 1 1 38.00 38 3 33 2 0
..................................................................................................CAAATTCGGTTCTAAAGAGGTTT........................................................ 23 1 1 38.00 38 4 18 16 0
..................................................................................................CAAATTCGGTTCTAGAGAGTT.......................................................... 21 1 1 37.00 37 6 25 2 4
....................................................................................................CATTCGGTTCTAGAGAGGTTT........................................................ 21 1 1 36.00 36 8 1 27 0
..............................................................TGTAGATCCGAATTTGTT................................................................................................. 18 0 1 36.00 36 12 8 16 0
.....................................................................................................ATTCGGTTCTAGAGAGGTTT........................................................ 20 0 1 36.00 36 9 24 3 0
..........................................................AACCTGTAGATCCGAATTTGTT................................................................................................. 22 1 1 35.00 35 17 1 4 13
..........................................................ACCCTGTAGATCCGAATTTGTG................................................................................................. 22 1 1 34.00 34 5 24 2 3
..................................................................................................CAAATTCGGTTCTAGAGACG........................................................... 20 1 1 34.00 34 32 0 0 2
..........................................................ACCCTGTAGATCCGAATTGGT.................................................................................................. 21 1 1 34.00 34 30 4 0 0
..................................................................................................CAAATTCTGTTCTAGAGAGGTT......................................................... 22 1 1 34.00 34 7 23 2 2
...........................................................CCCTGTAGATCCGAATTTTTT................................................................................................. 21 1 1 32.00 32 0 32 0 0
..........................................................ACCCTGTAGATCCGAATTTTTTT................................................................................................ 23 1 1 32.00 32 0 32 0 0
..................................................................................................CAAATTCGGTTCTGGAGAGGT.......................................................... 21 1 1 31.00 31 21 3 0 7
..................................................................................................CAAATTCGGTTCTAGAGAGGA.......................................................... 21 1 1 31.00 31 21 6 0 4
..................................................................................................CAAATTCGGTTCTAGCGAGGTTT........................................................ 23 1 1 31.00 31 17 3 10 1
..................................................................................................CAATTTCGGTTCTAGAGAGGTTT........................................................ 23 1 1 30.00 30 7 9 13 1
.................................................................................................TCAAATTCGGTTCTAGAGAGGTTT........................................................ 24 1 1 30.00 30 0 30 0 0
....................................................................................................AATTCGGTTCTAGAGAGGTT......................................................... 20 0 1 29.00 29 8 21 0 0
..................................................................................................CAAATTCGGTTCTAGAGTGGTTT........................................................ 23 1 1 29.00 29 5 7 14 3
..........................................................CCCCTGTAGATCCGAATTTGTT................................................................................................. 22 1 1 28.00 28 17 2 7 2
.........................................................CACCCTGTAGATCCGAATTTGTT................................................................................................. 23 1 1 28.00 28 6 19 2 1
..................................................................................................CAAATTCGGTTCTAGAGAGGTC......................................................... 22 1 1 28.00 28 15 7 4 2
..........................................................ACCCTGTAGATCCGAATTATTT................................................................................................. 22 2 1 28.00 28 2 19 7 0
..........................................................ACCCTGGAGATCCGAATTTGTT................................................................................................. 22 1 1 27.00 27 20 6 1 0
..................................................................................................CAAATTCGGTTCTAGAGCGGTT......................................................... 22 1 1 27.00 27 5 22 0 0
.................................................................................................CCAAATTCGGTTCTAGAGAGGTTT........................................................ 24 1 1 27.00 27 1 26 0 0
..................................................................................................CAAATTCGGTTCTAGAAAGGTTT........................................................ 23 1 1 27.00 27 13 11 1 2
...........................................................ACCTGTAGATCCGAATTTGTT................................................................................................. 21 1 1 27.00 27 9 0 17 1
...................................................................................................CAATTCGGTTCTAGAGAGGTT......................................................... 21 1 1 26.00 26 10 0 16 0
............................................................CCTGTAGATCCGAATTTGT.................................................................................................. 19 0 1 26.00 26 1 23 1 1
..................................................................................................CAAATTCGGTTCTCGAGAGGTTT........................................................ 23 1 1 26.00 26 13 2 8 3
..................................................................................................CAAATTCGGTTCTAGAGGT............................................................ 19 2 1 26.00 26 12 8 5 1
..................................................................................................CAAATTCGGTTCTAGAGAGGCT......................................................... 22 1 1 26.00 26 21 0 4 1
..........................................................ACCCTGTAGATCGGAATTTGTT................................................................................................. 22 1 1 26.00 26 7 11 8 0
..................................................................................................CAAATTCGGTTCTAGAGAGGTTTC....................................................... 24 1 1 26.00 26 12 9 5 0
..........................................................ACCCTGTAGATCCGAATTTGC.................................................................................................. 21 1 1 26.00 26 20 3 1 2
..................................................................................................CAAATTCGGCTCTAGAGAGGT.......................................................... 21 1 1 26.00 26 19 3 3 1
..................................................................................................TAAATTCGGTTCTAGAGAGGTT......................................................... 22 1 1 25.00 25 3 18 2 2
...................................................................................................AAATTCGGTTCTAGAGAGTTTT........................................................ 22 1 1 25.00 25 3 22 0 0
...................................................................................................AAATTCGGTTCTAGAGAGGGTT........................................................ 22 1 1 25.00 25 0 25 0 0
......................................................................................................TTCGGTTCTAGAGAGGTTT........................................................ 19 0 1 24.00 24 0 23 1 0
..................................................................................................CAAATTCGGTTTTAGAGAGGTT......................................................... 22 1 1 24.00 24 1 19 4 0
..........................................................ACCCTGTAGATCCGAATTTT................................................................................................... 20 1 1 24.00 24 2 22 0 0
..........................................................ACCCTGTAGATCCGAATTTGAT................................................................................................. 22 1 1 24.00 24 8 8 4 4
.........................................................GACCCTGTAGATCCGAATTTGTT................................................................................................. 23 1 1 23.00 23 0 23 0 0
..................................................................................................AAAATTCGGTTCTAGAGAGGTTT........................................................ 23 1 1 23.00 23 11 3 7 2
..................................................................................................CAAATTCGGTTCTAGGGAGGTT......................................................... 22 1 1 23.00 23 15 3 3 2
..................................................................................................CAAATTCGGTTCTAGAGAGGTTG........................................................ 23 1 1 23.00 23 3 16 2 2
..................................................................................................CAAATTAGGTTCTAGAGAGGTT......................................................... 22 1 1 22.00 22 1 19 0 2
..........................................................ACCCTGTAGATCCGAAGTTGGT................................................................................................. 22 2 1 22.00 22 0 22 0 0
....................................................................................................AATTCGGTTCTAGAGAGGT.......................................................... 19 0 1 22.00 22 9 12 1 0
..........................................................ACCCTGTAGATCCGAAATTT................................................................................................... 20 2 1 22.00 22 8 7 6 1
..................................................................................................CAAATTCGGTTCTAGAGGGGTT......................................................... 22 1 1 22.00 22 9 5 6 2
..................................................................................................CAAATTCGGTTCTAGTGAGGGTT........................................................ 23 2 1 21.00 21 0 21 0 0
..................................................................................................CAAATTCGGTTCTGGAGAGG........................................................... 20 1 1 21.00 21 11 2 0 8
..................................................................................................CAAATTCGGTTCTGGAGAGGTT......................................................... 22 1 1 21.00 21 15 3 3 0
..........................................................ACCCAGTAGATCCGAATTTGTT................................................................................................. 22 1 1 21.00 21 7 3 10 1
..................................................................................................CAAATTCGGTTCTAGAGAGGC.......................................................... 21 1 1 21.00 21 15 4 1 1
..........................................................ACCATGTAGATCCGAATTTGT.................................................................................................. 21 1 1 21.00 21 2 15 0 4
..........................................................ACCCTGTAGATCCAAATTTGT.................................................................................................. 21 1 1 21.00 21 6 12 0 3
..........................................................ACCCTGTAGATCTGAATTTGT.................................................................................................. 21 1 1 20.00 20 14 2 2 2
..................................................................................................CAACTTCGGTTCTAGAGAGGTTTT....................................................... 24 2 1 20.00 20 18 2 0 0
...................................................................................................AAATTCGGTTCTAGAGAGGTGT........................................................ 22 1 1 20.00 20 0 20 0 0
....................................................................................................AATTCGGTTCTAGAGAGG........................................................... 18 0 1 20.00 20 1 16 3 0
..................................................................................................CAAATTCGGTTCTAGAGAGGTTTAA...................................................... 25 2 1 20.00 20 8 7 4 1
...................................................................................................CAATTCGGTTCTAGAGAGGT.......................................................... 20 1 1 19.00 19 8 1 10 0
..........................................................ACCCTGTAGATCCGAATTTGTTC................................................................................................ 23 1 1 19.00 19 5 10 2 2
..........................................................ACCCCCTAGATCCGAATTTGTT................................................................................................. 22 2 1 19.00 19 5 1 12 1
..................................................................................................CAAATTCGGTTCTAGATAGGTT......................................................... 22 1 1 19.00 19 6 9 1 3
..................................................................................................CAAATTCTGTTCTAGAGAGGT.......................................................... 21 1 1 19.00 19 5 11 2 1
..................................................................................................CAAATTCGGGTCTAGAGAGGT.......................................................... 21 1 1 19.00 19 6 12 1 0
..........................................................ACCCTGTAGATCCGACTTTGT.................................................................................................. 21 1 1 18.00 18 16 0 1 1
..................................................................................................CAAATTTGGTTCTAGAGAGGTT......................................................... 22 1 1 18.00 18 8 3 7 0
.......................................................................................................TCGGTTCTAGAGAGGTTT........................................................ 18 0 1 18.00 18 0 18 0 0
..................................................................................................CAAATTCGGTTCTAGAGAAG........................................................... 20 1 1 18.00 18 16 1 0 1
..................................................................................................CAGATTCGGTTCTAGAGAGGTT......................................................... 22 1 1 18.00 18 9 4 2 3
..................................................................................................CAAATTCGGTTTTAGAGAGGT.......................................................... 21 1 1 18.00 18 0 9 9 0
...........................................................CCCTGTAGATCCGAATTTGTG................................................................................................. 21 1 1 18.00 18 0 18 0 0
..................................................................................................CAAATTCGGTCCTAGAGAGGTT......................................................... 22 1 1 18.00 18 11 5 2 0
..........................................................ACCCTGCAGATCCGAATTTGT.................................................................................................. 21 1 1 18.00 18 12 4 1 1
...........................................................CCCTGTCGATCCGAATTTGTT................................................................................................. 21 1 1 17.00 17 0 17 0 0
..................................................................................................CAAATTCGGTTCTAGAGAGGTTTAT...................................................... 25 1 1 17.00 17 12 2 0 3
..................................................................................................CAAATTCGGTCCTAGAGAGGT.......................................................... 21 1 1 17.00 17 9 6 2 0
..................................................................................................CAAATTCGTTTCTAGAGAGGT.......................................................... 21 1 1 17.00 17 7 10 0 0
..................................................................................................CAAACTCGGTTCTAGAGAGGTT......................................................... 22 1 1 17.00 17 5 12 0 0
..................................................................................................CAAATTCGGTTCTAGAGAGATTT........................................................ 23 1 1 17.00 17 6 6 1 4
..........................................................ACCCTGTAGATCCGCATTTGT.................................................................................................. 21 1 1 17.00 17 15 0 1 1
..........................................................ACCCTGTAGATCCGATTTTGT.................................................................................................. 21 1 1 17.00 17 4 8 5 0
..........................................................ACCGTGTAGATCCGAATTTGTT................................................................................................. 22 1 1 16.00 16 7 7 2 0
..................................................................................................CAAATTCGGTTCTAGAGAGGTTTTTT..................................................... 26 2 1 16.00 16 13 2 1 0
...........................................................CCCTGTAGATCCAAATTTGTT................................................................................................. 21 1 1 16.00 16 0 16 0 0
..................................................................................................CAAATTCGGTTATAGAGAGGTTT........................................................ 23 1 1 16.00 16 7 1 6 2
..................................................................................................CAAATTAGGTTCTAGAGAGGT.......................................................... 21 1 1 16.00 16 3 13 0 0
..................................................................................................CAAATTCGGTTCGAGAGAGGTTT........................................................ 23 1 1 16.00 16 0 9 7 0
..................................................................................................CAAATTCGGTACTAGAGAGGTTT........................................................ 23 1 1 16.00 16 2 8 4 2
..........................................................ACCCTGTAGATTCGAATTTGT.................................................................................................. 21 1 1 16.00 16 3 10 3 0
..................................................................................................CAAATTCAGTTCTAGAGAGGTT......................................................... 22 1 1 16.00 16 4 8 1 3
..........................................................ACCCTGTAGTTCCGAATTTGTT................................................................................................. 22 1 1 15.00 15 4 2 8 1
..................................................................................................CGAATTCGGTTCTAGAGAGGTT......................................................... 22 1 1 15.00 15 5 4 3 3
..................................................................................................CAAATTCGGTTCTAGAGAGGGTTT....................................................... 24 2 1 15.00 15 3 12 0 0
..................................................................................................CAAATTCAGTTCTAGAGAGGT.......................................................... 21 1 1 15.00 15 7 6 0 2
.................................................................................................GCAAATTCGGTTCTAGAGAGGTTT........................................................ 24 1 1 14.00 14 0 14 0 0
..........................................................ACCCTGTAGATCCGCCTTTGTT................................................................................................. 22 2 1 14.00 14 4 0 8 2
..................................................................................................CAAATTCGGGTCTAGAGAGGTT......................................................... 22 1 1 14.00 14 1 13 0 0
..................................................................................................TAAATTCGGTTCTAGAGAGGT.......................................................... 21 1 1 14.00 14 1 8 4 1
..................................................................................................CAAATTCGGTTCTAGAGACGTTTT....................................................... 24 2 1 14.00 14 14 0 0 0
...................................................................................................AAATTCGGTTCTAGAGAGGTTTA....................................................... 23 1 1 14.00 14 2 11 1 0
..................................................................................................CAAATTCGGTTCTAGAAAGG........................................................... 20 1 1 14.00 14 12 2 0 0
..................................................................................................CAAATTCGGTTCAAGAGAGGTTT........................................................ 23 1 1 14.00 14 3 4 7 0
..................................................................................................CAAATTCGGTTCTAGAGATG........................................................... 20 1 1 14.00 14 13 1 0 0
...................................................................................................AAATTCTGTTCTAGAGAGGTTT........................................................ 22 1 1 14.00 14 0 14 0 0
...................................................................................................AAATTCGTTTCTAGAGAGGTTT........................................................ 22 1 1 14.00 14 0 14 0 0
..................................................................................................CAAATTCGGTTCCAGAGAGGT.......................................................... 21 1 1 13.00 13 9 1 3 0
..........................................................ACCCGGTAGATCCGAATTTGTT................................................................................................. 22 1 1 13.00 13 6 2 4 1
..................................................................................................CAAATACGGTTCTAGAGAGGTTT........................................................ 23 1 1 13.00 13 2 5 3 3
..................................................................................................CAAATTCGGTTCTAGACAGGTT......................................................... 22 1 1 13.00 13 8 1 1 3
..................................................................................................CAAATTCGGTTCTATAGAGGT.......................................................... 21 1 1 13.00 13 4 5 2 2
..................................................................................................CACATTCGGTTCTAGAGAGGTT......................................................... 22 1 1 13.00 13 12 1 0 0
..................................................................................................CAAATTCGGTTCTAGAGAGT........................................................... 20 1 1 13.00 13 5 7 0 1
...................................................................................................AAATTCGGTTCTAGAGAG............................................................ 18 0 1 13.00 13 1 12 0 0
..................................................................................................CAAATTCGGTTCTAGAGCGGT.......................................................... 21 1 1 13.00 13 3 9 1 0
..................................................................................................CAAATTCGGTTCTAGAGG............................................................. 18 1 1 13.00 13 6 4 0 3
..........................................................ACCCCGTAGATCCGAATTTGT.................................................................................................. 21 1 1 12.00 12 8 4 0 0
..................................................................................................CAAATTCGGTTCCAGAGAGGTT......................................................... 22 1 1 12.00 12 5 1 3 3
..................................................................................................CGAATTCGGTTCTAGAGAGGT.......................................................... 21 1 1 12.00 12 5 3 4 0
..................................................................................................CAAATTCGGTTCTAGAGCGG........................................................... 20 1 1 12.00 12 5 6 0 1
..........................................................ACCCTGTAGACCCGAATTTGT.................................................................................................. 21 1 1 12.00 12 9 3 0 0
..................................................................................................CAAATTCCGTTCTAGAGAGGTT......................................................... 22 1 1 12.00 12 3 6 3 0
..................................................................................................CAAATTCGGTTCTATAGAGGTT......................................................... 22 1 1 12.00 12 2 9 0 1
..........................................................ACCCTGTAGATCCGAATTTATTT................................................................................................ 23 1 1 12.00 12 4 5 3 0
..................................................................................................CAAATTCGGTTCTAGAGAAGTTTT....................................................... 24 2 1 12.00 12 12 0 0 0
...........................................................ACCCTTAGATCCGAATTTGTT................................................................................................. 21 3 2 11.50 23 7 7 7 2
..................................................................................................CAAATTCGGTTCTAGAGAGTTTTT....................................................... 24 2 1 11.00 11 0 9 1 1
..................................................................................................CAAATTCGGTTCTAGAGAGGTTTGG...................................................... 25 1 1 11.00 11 0 11 0 0
..................................................................................................CAAATTCGGTTCTAGAGGGGT.......................................................... 21 1 1 11.00 11 6 2 2 1
..................................................................................................CAAATTCTGTTCTAGAGAGG........................................................... 20 1 1 11.00 11 4 4 1 2
..................................................................................................CAAATTCGGTTCTAGAGAGCT.......................................................... 21 1 1 11.00 11 5 3 2 1
..................................................................................................CAACTTCGGTTCGAGAGCGGTTT........................................................ 23 3 1 11.00 11 0 11 0 0
..........................................................ACCCTGTAGATCCGAATTTGTTTT............................................................................................... 24 0 1 11.00 11 6 4 0 1
..................................................................................................CAAATTCGGTTCTAGATAGG........................................................... 20 1 1 11.00 11 5 5 0 1
..........................................................ACCCTGTAGATCCGAATCTGT.................................................................................................. 21 1 1 11.00 11 8 3 0 0
..................................................................................................CCAATTCGGTTCTAGAGAGGTT......................................................... 22 1 1 11.00 11 8 0 2 1
..................................................................................................CAAATTTGGTTCTAGAGAGGT.......................................................... 21 1 1 11.00 11 4 1 5 1
..................................................................................................CAAATTCGGTTCTAGGGAGGT.......................................................... 21 1 1 11.00 11 6 3 2 0
..........................................................ACCACGTAGATCCGAATTTGTT................................................................................................. 22 2 1 11.00 11 0 11 0 0
..........................................................ACCCTGTAGATCCTAATTTTTT................................................................................................. 22 2 1 11.00 11 0 11 0 0
..................................................................................................CAAATTAGGTTCTAGAGAGG........................................................... 20 1 1 11.00 11 1 9 0 1

Anti-sense strand reads

ACGGGTCGCCTCAAGTAAAGCGGGGTCGCTGACAAGGAGTAGTCAAACGAGGTGCAGATGGGACATCTAGGCTTAAACAAAATATGATCGAAATTCCTGTTTAAGCCAAGATCTCTCCAAACACACCAAGTTATAGGTAGCTTTTTCACATCGACTACCGTTCGCTATTTCACTAAA

*****************************************..(((..(((((...(((((.((((.(((((((((((((............))))))))))))).)))).)).)))...)))))..)))....******************************************* 		Read size # Mismatch Hit Count Total Norm Total V113

male body		 V114

embryo

 M054

female body

 V115

head
..........................................................TTGGAGATCTTGGCTTAAAC................................................................................................... 20 3 9 2.89 26 7 10 9 0
...............................ACAAGGAGTGGTCAAGCG................................................................................................................................ 18 2 2 0.50 1 0 0 0 1
..........................................................TGGGAGATCTTGGCTTAAAC................................................................................................... 20 2 2 0.50 1 1 0 0 0
..........................................TCAATCGACGTGCACATGG.................................................................................................................... 19 3 10 0.10 1 1 0 0 0
..........................................................TGGAAGATCTTGGCTTAAAC................................................................................................... 20 3 11 0.09 1 0 1 0 0
.................................................................................................TGTTTAAGCCTAGATCCCA............................................................. 19 3 17 0.06 1 1 0 0 0
..........................................................TTGGAGATCTTGGCTTAAA.................................................................................................... 19 3 20 0.05 1 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droSec2 scaffold_6:2726399-2726575 - dse-mir-10 Known_mirbase TGCCCAG-CGG--------------------------------------------------AGT------------TCATTTCGC-C-CCAGCGA--------CTGT----TCCTCA------TCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATCGAAA---------------AAG-----TGTAGCTGATGGCAAGCGATAAAGTGAT--------TT
droSim2 3r:2529786-2529962 - dsi-mir-10 Known_mirbase TGCCCAG-CGG--------------------------------------------------AGT------------TCATTTCGC-C-CCAGCGA--------CTGT----TCCTCA------TCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATCGAAA---------------AAG-----TGTAGCTTATGGCAAGCGATAAAGTGAT--------TT
dm3 chr3R:2635178-2635354 - dme-mir-10 Known_mirbase TGCCTAG-CGG--------------------------------------------------ACT------------TCATTTCGC-C-CCAGCGA--------CTGT----TCCTCA------TCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATCGAAA---------------AAG-----TGTTGCTGATGGCAAGCGGAAAAGTGAT--------TT
droEre2 scaffold_4770:2882520-2882695 - der-mir-10 Known_mirbase TGCCCAG-CGC--------------------------------------------------AGT------------TCATTTCGC-C-CCTCCGA--------C-GT----TCCTCA------TCAGTTTGCTCTACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATCGGAA---------------AAG-----TGAAGCTGATGTCAAGCGGAAAAGTGAT--------TT
droYak3 3R:7777948-7778131 + dya-mir-10 Known_mirbase TGCCCAG-CGA--------------------------------------------------AGT------------TCATTTCGC-C-CCTGCGACGA-ACTGACGT----TCCTCA------TCACTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGTT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATCGGAA---------------AAG-----TGAAGCTGATGTCAAGCGGAAAAGTGAT--------GT
droEug1 scf7180000409886:257292-257460 + TGCTCAC-CTG--------------------------------------------------AGC------------TCATTCAGC-CGCCTGCGA--------CTGTTAGGTCTCCT------TCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTACTCTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATGTTCATCGATA-GCCGAA---TACG-----------------------------GAAGTGAA--------AT
droBia1 scf7180000302155:2026079-2026248 + TGCGCGCCCTG--------------------------------------------------AGC------------TCCCTTCGC-C-CCTGCGA--------CTGC----TCGCCT------CCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTGTATACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATGTCCATCGTAAAACGCAT-----TTTG---------------------AGTGAAAAAG--AA--------AT
droTak1 scf7180000415671:411398-411584 + TGCCCACCCTG--------------------------------------------------AGT------------TCACTTCGC-C-CCTGCGA--------CTGC----TCTCCT------TCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATCGATA-AAACAT-----TTAAAG-----TGAAACTGAAATGAAGTGAAAAAGTGAA--------AC
droEle1 scf7180000491278:1424337-1424525 - TGCTCAC-CTC--------------------------------------------------AGT------------TCATTTCGC-C-GCTGCGA--------CTGC----TCCCCT------TCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTACATTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCAGCGAAA-TAGCATGAT--TTCAAA-----TGAAGCCGAAATCAAGTGACAAAGTGAA--------TT
droRho1 scf7180000777432:2214-2399 + TGCTCAC-CTC--------------------------------------------------CGT------------TCATTTCAC-C-CATGCGACGCGA---CTGT----TCTCCT------TCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTACATTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTCCAATATCCATCGATA-AATC----------AAA-----AGAAGCCGGAATCAAGTGAAAAAGTGAA--------TT
droFic1 scf7180000453835:71946-72119 - TGCTCAC-CTG--------------------------------------------------AGTCACT-G----CGTCATTTCAA-C-CCGGCGA--------CTGC----TCCCCTCCAGTTTCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATGTCCATCGAAA---------------AA-----------------------------GTGATCTCAGCTGAT
droKik1 scf7180000302639:2316878-2317063 + TGCTCAC-CTG--------------------------------------------------CCTCACCTGACT---TCATTATCC-C-GCAGCGG--------CTGT----TCAGCG------CCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGTT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCAACGTAA-AATCATAATTA--AAAC-----TAAA-ACGAAACC--------AAGTGA-----------
droAna3 scaffold_13340:5417309-5417487 + dan-mir-10 Known_mirbase TGCCCAC-CGC---------------------------------------------------CTCACCCAACACCG---T--CACAC-CTTGCGG--------CTGT--GCTCCTAT------CCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGTT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATTTCCATCGTAA---------------AATAAAAGTGTT--TAA----------TGAAGTGAT--------TG
droBip1 scf7180000396708:3396377-3396551 - TGCCTGC-CTT------------------------------------------------------GCCCGACACCG---T--CACAC-CTTGCAA--------CTGT----TCCTAT------CCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGTT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATCGTAA---------------AAGAAGAGTGTT-----------TTGTTAAAGTGTT--------TG
dp5 2:19739416-19739628 + dps-mir-10 Known_mirbase TGCTCAC-CTCTCGGCGCCCTCGGGCATGGCACCGGGCTCCACACCCCGTCCTCTGCAGGCAGT------------TTTTTTG----------------------G-----TTC--T------CAAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTACATTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATGTACAACGAAA-ACAGATAGTTATTAAAG-----TGAA---------AAGTGATAAAGTG------------
droPer2 scaffold_3:2487609-2487821 + dpe-mir-10 Known_mirbase TGCTCAC-CTCTCGGCGCCCTCGGGCTTGGCACCGGGCTCCACACCCCGTTCTCTGCAGGCAGT------------TTTTTTG----------------------G-----TTC--T------CAAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTACATTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATGTACAACGAAA-ACAGATAGTTATTAAAG-----TGAA---------AAGTGATAAAGTG------------
droWil2 scf2_1100000004902:12007283-12007422 - dwi-mir-10 Known_mirbase T---------------------------------------------------------------------------------------------------------------------------CGCTTTGTTCTACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGTTTTTAAGGACAAATTCGGTTCTAGAGAGGTTTAAGTGGTTCAATGTTCTACAAACAAACCAA-----AAAAAG-----TAACAACAATAACAA--------GTGAC--------AA
droVir3 scaffold_13047:6092022-6092162 + dvi-mir-10 Known_mirbase TAC--AC-CTG--------------------------------------------------TGT------------GTATTGCCA-C----GCGT--------CTAG-------GTT------TCACTTTGTTCCACGTCCACCCTGTAGATCCGAATTTGTTGTACACTAGTT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTCTGTGGCTCATTGTCCAGCGAAT---------------AT-----------------------------GTG------------
droMoj3 scaffold_6540:16502888-16503004 + dmo-mir-10 Known_mirbase TGCATGT-CTA--------------------------------------------------AGT------------TC----------------------------------------------CACTCTGTTCCACGTCTACCCTGTAGATCCGAATTTGTTGTACCATAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTATGTGGCTCATTGTCCAGCGAA--------------------------------------------------------------
droGri2 scaffold_14906:11443516-11443688 + dgr-mir-10 Known_mirbase TATATAT-ATA--------------------------------------------------TAT------------ACATATAGT-TTATATATA--------CTGT----T----T------TCACTTTGTTCCACGTCTACCCTGTAGATCCGAATTTGTTGTACACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGCTCAATGCCCACCGAAA-TGAGT-A-------AAGAATAGTGAA---------TAGTGA-ATAGTGAA----------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSec2
TGCCCAG-CGG--------------------------------------------------AGT------------TCATTTCGC-C-CCAGCGA--------CTGT----TCCTCA------TCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATCGAAA---------------AAG-----TGTAGCTGATGGCAAGCGATAAAGTGAT--------TTSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTT..............................................................................................................................221161175.001611753530777073389099886
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTT....................................................................................23197296.00972963608637344197074159
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTT.....................................................................................22119300.00193006131970620421421
.............................................................................................................................................ACCCTGTAGATCCGAATTTGT...............................................................................................................................21114501.0014501368588068971113
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGT......................................................................................21112774.0012774339769921592793
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGG.......................................................................................2015074.00507413302945253546
..............................................................................................................................................CCCTGTAGATCCGAATTTGTT..............................................................................................................................2113466.003466342024166
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTT....................................................................................2213265.003265283828411924
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTT...................................................................................2412161.0021613271485190159
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTT.............................................................................................................................2311749.0017493541046193156
.............................................................................................................................................ACCCTGTAGATCCGAATTTG................................................................................................................................2011605.00160564379354115
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTT.....................................................................................211534.0053446253136
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAG........................................................................................191385.003851321446940
..............................................................................................................................................CCCTGTAGATCCGAATTTGT...............................................................................................................................201372.00372366600
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGGT......................................................................................201311.003112663465
........................................................................................................................................................................................AATTCGGTTCTAGAGAGGTTT....................................................................................211239.0023919930100
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTC..............................................................................................................................221190.0019025102549
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTA...................................................................................241178.0017866633613
...............................................................................................................................................CCTGTAGATCCGAATTTGTT..............................................................................................................................201176.0017613220231
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTA.............................................................................................................................231165.001656072285
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGG......................................................................................211119.00119113420
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTA.....................................................................................221118.00118357229
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGG.......................................................................................191117.00117952101
.............................................................................................................................................ACCCTGTAGATCCGAATTT.................................................................................................................................19184.008444111415
..............................................................................................................................................CCCTGTAGATCCGAATTTGTTT.............................................................................................................................22180.00804317137
............................................................................................................................................TACCCTGTAGATCCGAATTTGT...............................................................................................................................22177.00771837139
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTC....................................................................................23174.00741733213
..............................................................................................................................................CCCTGTAGATCCGAATTTG................................................................................................................................19171.007171000
...................................................................................................................................................................TTATACTAGCT-TTAAGGA...........................................................................................................18166.006600651
......................................................................................................................................................................................CAAATTCGGTTCTAGAGA.........................................................................................18166.0066182415
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTA....................................................................................23165.00652723105
.............................................................................................................................................ACCCTGTAGATCCGAATTTGG...............................................................................................................................21160.006060000
............................................................................................................................................TACCCTGTAGATCCGAATTTGTT..............................................................................................................................23159.00592420132
.....................................................................................................................................................................................ACAAATTCGGTTCTAGAGAGGTTT....................................................................................24158.005838893
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTG...................................................................................24150.005042440
................................................................................................................................................CTGTAGATCCGAATTTGTT..............................................................................................................................19148.0048291261
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTTT...................................................................................23147.0047331211
.............................................................................................................................................ACCCTGTAGATCCGAATT..................................................................................................................................18146.0046150265
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTA..............................................................................................................................22140.0040181444
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTG.............................................................................................................................23138.003833320
.................................................................................................................................................TGTAGATCCGAATTTGTT..............................................................................................................................18136.0036812160
.........................................................................................................................................................................................ATTCGGTTCTAGAGAGGTTT....................................................................................20136.003624930
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTG..............................................................................................................................22134.003424523
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGA......................................................................................21131.003162104
........................................................................................................................................................................................AATTCGGTTCTAGAGAGGTT.....................................................................................20129.002921800
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTC.....................................................................................22128.002871542
...............................................................................................................................................CCTGTAGATCCGAATTTGT...............................................................................................................................19126.002623111
......................................................................................................................................................................................CAAATTCGGTTCTAGAGGT........................................................................................19126.002681251
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTC...................................................................................24126.002691250
.............................................................................................................................................ACCCTGTAGATCCGAATTTGC...............................................................................................................................21126.002632012
..........................................................................................................................................................................................TTCGGTTCTAGAGAGGTTT....................................................................................19124.002423010
.............................................................................................................................................ACCCTGTAGATCCGAATTTT................................................................................................................................20124.002422200
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTG....................................................................................23123.002316322
........................................................................................................................................................................................AATTCGGTTCTAGAGAGGT......................................................................................19122.002212910
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGC......................................................................................21121.002141511
........................................................................................................................................................................................AATTCGGTTCTAGAGAGG.......................................................................................18120.002016130
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTAA..................................................................................25120.00207841
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTC.............................................................................................................................23119.001910522
...........................................................................................................................................................................................TCGGTTCTAGAGAGGTTT....................................................................................18118.001818000
..............................................................................................................................................CCCTGTAGATCCGAATTTGTG..............................................................................................................................21118.001818000
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTTA...................................................................................23114.001411210
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGT.......................................................................................20113.00137501
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAG........................................................................................18113.001312100
......................................................................................................................................................................................CAAATTCGGTTCTAGAGG.........................................................................................18113.00134603
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTGG..................................................................................25111.001111000
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTTT............................................................................................................................24111.00114601
droSim2
TGCCCAG-CGG--------------------------------------------------AGT------------TCATTTCGC-C-CCAGCGA--------CTGT----TCCTCA------TCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATCGAAA---------------AAG-----TGTAGCTTATGGCAAGCGATAAAGTGAT--------TTSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTT..............................................................................................................................221217078.0021707811214374698834890997743441651629201274310253321262684798124
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTT....................................................................................231135074.0013507480511772331242160532151109616694346866674886374014238291187167428
.............................................................................................................................................ACCCTGTAGATCCGAATTTGT...............................................................................................................................21144410.00444101028317348913285132617924224321649117626491095000
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTT.....................................................................................22144113.0044113103641368256542192182106126229919861470227836652992240
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGT......................................................................................2119073.0090739342072165710353241394759751637561041313073511
.............................................................................................................................................ACCCTGTAGATCCGAATTTG................................................................................................................................2019034.00903436143379557162723261138311064311108000
............................................................................................................................................TACCCTGTAGATCCGAATTTGT...............................................................................................................................2214033.004033851304531235232123730051211000
.............................................................................................................................................ACCCTGTAGATCCGAATTTGG...............................................................................................................................2112895.002895562144387790020000200000
.............................................................................................................................................ACCCTGTAGATCCGAATT..................................................................................................................................1812345.002345286420415688231383551100000
.............................................................................................................................................ACCCTGTAGATCCGAATTTGC...............................................................................................................................2111975.00197566584845910000010100000
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGG.......................................................................................2011763.00176320940483239294169126268054126049111
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTT....................................................................................2211563.001563818371278623020220181149010
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTA.............................................................................................................................2311516.0015167247573616005214103390702000
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTC..............................................................................................................................2211366.001366126329851700217813400000
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTT.............................................................................................................................2311301.001301583533351307834701327174167015000
..............................................................................................................................................CCCTGTAGATCCGAATTTGTT..............................................................................................................................2111290.001290811242498181031550300000
......................................................................................................................................................................................CAAATTCGGTTCTAGAGA.........................................................................................1811283.0012837205148033815116280300000
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTT...................................................................................2411235.001235602211101830027713141690520136
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAG........................................................................................1911213.001213192353170633328624261603002
.............................................................................................................................................ACCCTGTAGATCCGAATTT.................................................................................................................................1911035.0010351732346483681371789120401000
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTC....................................................................................231441.0044111113717050030130209000
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGG......................................................................................211439.0043974163175230011000002000
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTA...................................................................................241401.0040126429002052931051267011
..............................................................................................................................................CCCTGTAGATCCGAATTTGTTT.............................................................................................................................221365.00365578919972010010801000
.................................................................................................................................................TGTAGATCCGAATTTGTT..............................................................................................................................181324.003242253196100333483100000
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTAA............................................................................................................................241314.003141517891100201970001000
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTG..............................................................................................................................221307.0030789519500000000900000
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTT.....................................................................................211298.0029811191120311215604033001
............................................................................................................................................TACCCTGTAGATCCGAATTTG................................................................................................................................211287.002872114261014215110102000
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTC.....................................................................................221273.002731011154850000100003000
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGC......................................................................................211271.00271701217440010000001000
...............................................................................................................................................CCTGTAGATCCGAATTTGTT..............................................................................................................................201182.001821232942900100301001000
............................................................................................................................................TACCCTGTAGATCCGAATTT.................................................................................................................................201174.001741000003170000000000
..............................................................................................................................................CCCTGTAGATCCGAATTTGT...............................................................................................................................201165.00165243116840008200000000
............................................................................................................................................TACCCTGTAGATCCGAATTTGTT..............................................................................................................................231147.00147202543800630630402000
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTC...................................................................................241123.0012322374530010630204000
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTA....................................................................................231116.001162631800514501071000
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGGT......................................................................................201110.00110126911011210004000
................................................................................................................................................CTGTAGATCCGAATTTGTT..............................................................................................................................191110.001107136260011664400000
........................................................................................................................................................................................AATTCGGTTCTAGAGAGGTTT....................................................................................211102.00102012902100030002001
.....................................................................................................................................................................................ACAAATTCGGTTCTAGAGAGGTTT....................................................................................24186.008623271312025501024001
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTA.....................................................................................22185.008552331900201000032000
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTA..............................................................................................................................22177.007711381250030321200000
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTG.............................................................................................................................23173.00736193670040000100000
..................................................................................................................................................GTAGATCCGAATTTGTT..............................................................................................................................17173.00730000002603287000000
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTG....................................................................................23172.00726282450000000207000
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTG.....................................................................................22166.006614321420000000004000
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTG...................................................................................24155.00555516154000140005000
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTAA..................................................................................25155.00551334002310700022000
............................................................................................................................................TACCCTGTAGATCCGAATTTGG...............................................................................................................................22147.00475142800000000000000
......................................................................................................................................................................................CAAATTCGGTTCTAGA...........................................................................................16134.00340000005210170000000
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTC.............................................................................................................................23133.003306670050510300000
............................................................................................................................................TACCCTGTAGATCCGAATT..................................................................................................................................19131.0031224000122000000000
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTTT...................................................................................23130.0030002190010000008000
............................................................................................................................................TACCCTGTAGATCCGAATTTGC...............................................................................................................................22128.0028432100000000000000
..........................................................................................................................................................................................TTCGGTTCTAGAGAGGTTT....................................................................................19127.0027236100000030102000
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTTA...................................................................................23127.0027000500001100020000
...............................................................................................................................................CCTGTAGATCCGAATTTGT...............................................................................................................................19125.002578540000010000000
.........................................................................................................................................................................................ATTCGGTTCTAGAGAGGTTT....................................................................................20124.0024016120000020003000
.....................................................................................................................................................................................ACAAATTCGGTTCTAGAGAGGTT.....................................................................................23123.002345430010120102000
......................................................................................................................................................................................CAAATTCGGTTCTAGAG..........................................................................................17123.0023000000201470000000
.............................................................................................................................................ACCCTGTAGATCCGAATTTGA...............................................................................................................................21123.00231011000010100000000
.............................................................................................................................................ACCCTGTAGATCCGAATTTT................................................................................................................................20117.001755130001200000000
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGG.......................................................................................19117.0017100150000010000000
..............................................................................................................................................CCCTGTAGATCCGAATTTG................................................................................................................................19116.0016111121000000000000
............................................................................................................................................TACCCTGTAGATCCGAATTTGA...............................................................................................................................22116.0016000000115000000000
........................................................................................................................................................................................AATTCGGTTCTAGAGAGGTT.....................................................................................20115.0015111100000100001000
............................................................................................................................................TACCCTGTAGATCCGAATTTGTA..............................................................................................................................23115.0015010000014000000000
.............................................................................................................................................ACCCTGTAGATCCGAAT...................................................................................................................................17113.001300000052132000000
......................................................................................................................................................................................CAAATTCGGTTCTAGAGG.........................................................................................18113.001385000000000000000
......................................................................................................................................................................................CAAATTCGGTTCTAGAGT.........................................................................................18113.001374100000000100000
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGA......................................................................................21113.001355010010000001000
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTTTATACT.......................................................................................................................29112.001206500010000000000
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTAA...................................................................................24111.001110010000020007000
............................................................................................................................................TACCCTGTAGATCCGAAT...................................................................................................................................18110.001000200008000000000
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTTTAT..........................................................................................................................26110.001062200000000000000
................................................................................................................................................CTGTAGATCCGAATTTGT...............................................................................................................................18110.001023200100110000000
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTAA.............................................................................................................................2319.00917000000000001000
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAG........................................................................................1819.00900033300000000000
dm3
TGCCTAG-CGG--------------------------------------------------ACT------------TCATTTCGC-C-CCAGCGA--------CTGT----TCCTCA------TCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATCGAAA---------------AAG-----TGTTGCTGATGGCAAGCGGAAAAGTGAT--------TTSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTT..............................................................................................................................2211499097.0014990970000567402263107701100600212511470271374615533175869147128130231219512347518861270328110610810866000156892400000000000000000242311102517412221117840278144461410572513129310082168896160330091516244459328168420219206266212411551135031645330470042151627223603078649010779159059861323744083151064381159152202450000001010191412121161010319240681846171349471092379246628653410153210712971743654205362130401710368265717625115015214637725116174257640009933753247524986317379785021301281584257526250023790018430192861176139024211611653264088395711211976020521841861838369365711564117043511111337220338382661835502171432012365815911051701794136093245303016703264104894747291386710278517449761260411520966628287294051934682149299434783799099852710962758017144251041716571425541252242898423345382438487099636468702972121374163312752
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTT....................................................................................231647414.00647414000068943313114435116079118010012301516126290141393816596618656450325111573411333463411241938313872410001582153133000000000000000000543261263855233782487312015580132350419510340040990322723142569502314101933326107886250332303373118613535223686510169384188983411023537413244050344202618192467198427892529167971532221325718332834522300000700111431173216025798245117622621911082442375258454390370101023591180228502044228817075157561172760502000193919342513782414504004112846177901438642616949711788389220262997360052160085956734422539843436010220850542618620403441879825281278018639464131217031281301153541611974528905541452224400744329151557869489452343707741073733759482140701735572957714001800052398415096267177131521942944837462301043714549628274593562037494632662516947251862974826158950296217310
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTT.....................................................................................221138858.00138858000051741683212890150020001549507019952195349259712141321392343421789880002062025300000000000000000110014262241811242601951528029112120874192719195555209420090155128208011682551016097542159642565732011256029244210335830533038513101434125346311120000000000068972005624122193391582179584901018341100005406334563124705011120512521130500015027390231000003530228221709483411082464741179175120118600773670255631387026203020879200761319611801947116629870630241001839081736222061018108498010110701957210720712294275845901779107037121621052431523225020460044526022938758162618212628383605481483864961861028250935200734866853017033300
.............................................................................................................................................ACCCTGTAGATCCGAATTTGT...............................................................................................................................211131646.001316460000020116131010000027140040651473126115081142061246310137441000107883200000000000000000110271012355400258991041834537511881157861500027619132217138381200822423644911315021651014113828642115192023481485777128000010000000315346021398188145178053304563877001030635159372247942317011934618611161010052191252236000007626523194247221697820815206246330008200775840161020610403463116137821013441416831160299841650732087129000470357438324873842978215137103103423123410956501712161532672090149978396896285177520399725713750713041714832874311918642174121513610210738992840494519775662465968712638881615
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGT......................................................................................21131375.00313750000260048002021020002242300021133765022360101030534111220000726522000000000000000000001222622000017441813102416192245572100010388682414014111110013924114625802522030033163168102457418400320000000400012012706833307014421105814140000072239139499530025212802503000236901722300326142116490316402746777620000116700205136014675420020680023100025975400205912905507064011000291802111843227229911405415124063755252036243562086534735782272125211134999016861641811387203031382174519126713021735126910831134138070266415
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTT...................................................................................24118860.001886000000215161130100000011300100000000032000100050000022100000000000000000000000000013116181002129312615282292616300002221590240103020011101208100000000501168110923044424322010000000000039820444329305181549987000004823131515200052142126000004246001000000134636524242510141034152900001050093660773301005422095000100053104125163640100300034218744285732948184000058289163149128272342806733308144342786480116961404842122819130107821209211511049781346853608121398510206200
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGG.......................................................................................20115056.001505600001100010000207400007500000000003251130000100100012010001110200000000000000000000012124000315111331320101800000110133070198050105221519104381535105546141848000012326003000000000000338402215142310155497781200000407739153100071052503000010003100000868550466037616121561021520024210423110157550105000932150061050274990200500025765599771036000130120311518025461100130631623112822941023340034890893250003311150679101234221310045776186979015093000
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTT.............................................................................................................................23113353.0013353000000000100000001001201000010000020300000102130000000002622400000000000000000000004377000102000002120130200001010120400000021300000000000000034437564251230441402000000000005140500480211581950000069047323700011512801100000324533030000052316936451113310200800017600102900896110084405800020901100182622871410410300034336693534333130241010015423610151642216733534719552460194051961306671126102311400168212014021524960496305887674843223919620
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTATC..................................................................................2519737.009737000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000082601477000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................ACCCTGTAGATCCGAATTTG................................................................................................................................2018795.00879500003100110000000000100100000000008320000000100000012000001272000000000000000001000111416161009024104712342082793200038624608015401033102032011000000071721500110126004000000000000328402020172832505596416000007181532321000110059000000060040000005231111810305121100700002100474104919100137420380008128104135199360000100035200971291431272000036110060821645011513589431223168213370215381021443249112002311201634418395308992231383062013100
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTT....................................................................................2214723.004723000000000100000000000071000000000000000020021221211020001116000000000000000000010032320001020001110034010000000000010930101120305320000010010192730110100170010000000170000444103000144031203237420000031591716140003217530000051300000000071715912811379584200000000493202250000133014000340500181038340010100063743093641600003533533751370356594224574856132017516500201626149830024020199513669183109180181179101900
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAG........................................................................................1913705.00370500000000000000004200003400036427100100000030001020001000182150000000000000000000000000200060410025120213820000000000030400100000011200372900003213600001101100000000000000073504334852612119500000146259130005003520100054100000000111181195155415330020000033220147000013221380002302002520834700101000102309128190000894141504116562019564410258701551160001129163800038020174017619216393129160150400300
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTA.............................................................................................................................2312658.0026580000000001000000000000120000000000100000000000000200000000000000000000000000000002232113000180110392003000000011151040010000000000000000000004492614012151412640000000000000001100001310020300000032410810000230301000002120000000002318170361049130000725100161002000007105000150100267011220010000058411756752422000095225926217201480448310575100148411361000190102641451243238061770021900
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTC..............................................................................................................................2212610.00261000000000031000000000000000000000000010000000000001001000000000000000000000000000001310004010000000103000000000000000000000100000000000000001571201010040010000000000002501007102043730000039121188000240221000007112000000003244153000200000000000019250121000070090006206004510191800000000131121171467320000064992121691271612172183812721931030201114166200016020204129152933129851170032200
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTA...................................................................................2411901.0019010000100200000000000000300000000000100000000000000100000000000000000000000000000001000710020131012137103592000006123201002000000201011000000000022516001451040000000000000001111090191012060110000001025348000204270000031100000000028451704006510040000153780076062000052070009030023107300000000105261732001200004292715193944151729213440049500041126120003010461633712455714862001200
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTC....................................................................................2311084.001084000023115723100000000010000000000000000000010000000000000000000000000000000000000621100039061001110017210010020111012000000000000210000000000113300000020000000000000003701210911203116000000131832200080700000051000001000133523010000000000114001090110100200600080200120011800000000315412270200007141672064541033271004420442500012430000603034023302824372833003100
......................................................................................................................................................................................CAAATTCGGTTCTAGAGA.........................................................................................1811081.001081000000000000000000000001000052023100100000000000000000009820000000000000000000000007000000000200523000000100000020000000000100301133911300000303300000006000000000000000060210122050151100000328140200016010006000062000000002914010800130000000000002714023000013040009000011601050010000003240005000025124111017279752810002301619001013000000001301514231272326100000
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTAA............................................................................................................................2411044.001044000000000000000000000000000000000000000000000000020000000000000000000000000000000308020000300100200200000000000000000000000000000000000000023416005515720000000000000000000000110000000000000262500001100000001000000000000201400210000000000200100000100000010000017024000000009557021721214000021010302201000120630018531140000101022010451065000000
............................................................................................................................................TACCCTGTAGATCCGAATTTGT...............................................................................................................................2211019.001019000000000000000000000001000000000000000001000100000000000000000000000000000002310507210000400002100206100310011200100100000000002000000000002740010006010000003500000030210111003011220500001733260020019000000251221103320001224230010021000000000271900101000001000110300124016500000000181132512000012652994589125511021712431011433000001001056112514103424300026017
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTA....................................................................................231986.00986000002032933400000000020000000000000000000000000000000000000000000000000000000000621000043022000160000200000210030128030000102020100000000000073000110010000000000000003130410140409125000000714304000302500000022000000000032411130005100000159230093011000052070001020001101040000000012020602000048119141815553171021180242600402282000901015629173911152228000300
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTT.....................................................................................211930.009300000000000000000000000500000000000000000000000000000000000100000000000000000000000001000100000100000000000000000000011020221000020000000000053100001010000000000000006904006743082219000001223020005090000000000000000003259031001100000000063053000032060008010001207130000000005230702000041014111925391284131326400423500032430000800028056335534273739200100
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTG..............................................................................................................................221812.008120000000000100000000000000000000000000000000000000000000000000000000000000000000002011000300000000000000000000000002000000002000000000000000346140000001010000000000000000010000002263232800001212000020151000001100700100000014110000000000000000049031000040000002010039033000000006710642600002991271178210281020480113129000001000001000701101145000000
.................................................................................................................................................TGTAGATCCGAATTTGTT..............................................................................................................................181805.008050000000000000000000000000000000000000000000000000000000000000000000000000000000008011000002000011001010000000012200000000000000000000000000411112020000180000000000000000000001200020000000043915291700046013218000000140500000001242200000000000000009130100000000100030000020230000100001000070600006020144295433111212013190102310000301029220299251733000103
.............................................................................................................................................ACCCTGTAGATCCGAATT..................................................................................................................................181729.00729000000000000000000000000000110001000000000000000000000001100000000000000000000000000000000000000000100000000000000000000000000000011524360000000020000000100000000000000001002100001100300000203000003020100000100000000020273000021000000000005901100001000000201001502200000000000001000000010122112020000101200000000000000000000000000100
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTA..............................................................................................................................221651.0065100000001140020000000000000000000000000000000001000000000000000000000000000000000010000006000000000000010000000000000000000000000000000000001105800000000000000000000002001020301032420000021711000405000000120000000000286970000000000001160067010000011040001000001601100000000126110120600001110311133246302380202200155490000100202941149617611000600
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTG....................................................................................231593.005930000110006323000000000000000000000000000000000000000000000000000000000000000000000002000690000000011000000000010020180200101000000000000000001011000000100000000000000056040013000303630000006400000000140000000000000000000541600000000000000002202000001303000003000203200000000414124110000101815183750213420201602916000014000010006031851422000000
.............................................................................................................................................ACCCTGTAGATCCGAATTTGC...............................................................................................................................211550.005500000000000000000000000000000000000000000000000000000000000000000000000000000000000001100001000000000000000000000000010000000000000000000000011210000120000000000000004202000000040500000085314000300000000000000000000087000000000000000034010000010030008000018033000000002453124210900003862489999292015390274000042280000900016214810810811100100
..............................................................................................................................................CCCTGTAGATCCGAATTTGTT..............................................................................................................................211523.00523000000001100000000000000000100000000000000000001000000000000000000000000000000000822500000600003020142100000100232000000000000011000000000021150000004000000000000000770901870606590000001823110006050000003200000000002110010000000000000089030000020000003040003013000000003200628120000542141615112100002041300021332010802027175133272134002200
............................................................................................................................................TACCCTGTAGATCCGAATTTGTT..............................................................................................................................231517.0051700000000000000000000000000000000000000000000000000000000100000000000000000000000000020100000000100000000000000010000000000200000000000000000030011000900000000000000010010001000200000000012513000150130000000200400000000712010000000000000067051100030010004010001903500000000022613010000513012713621200039034300002325100040003801261810252829000600
..............................................................................................................................................CCCTGTAGATCCGAATTTGTTT.............................................................................................................................221440.0044000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000001000000000003020000000100000000000000001011030000001000000164121009012000000000000000000076000000000000000035041000011020009000008044000000001514070200005331141512000301001223000135210008000560136105212533000500
................................................................................................................................................CTGTAGATCCGAATTTGTT..............................................................................................................................191408.00408000000000000000000000001000000000000000000000000000000000000000000000000000000000301120000000000000000000000000010000000000000000000000000005102000110020000000000000000000001001000000000021116140001303000000040000000000319220000010000000000750000000000200030200050220000000021802040400005201435317243010150913000023100030001705436131312000005
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTG...................................................................................241378.00378000000010000000000000000000000000000000000000000000000004533170000000000000000000000302300000400210100000000100001040200000000000000000000000001100000100000000000000020120100000202180000002801100020300000001000000000148700000101000000003300000000001000100000300200000000003103010000253041020060301007049000005100020005077118241813000000
.............................................................................................................................................ACCCTGTAGATCCGAATTTGG...............................................................................................................................211377.0037700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000001010000000000000000000000021010011000721600000061010000001000000000000000000062000000000000000024002010010010005000002033000000003913112300004023291724101064230114180353500001500000000103102031000000
.............................................................................................................................................ACCCTGTAGATCCGAATTT.................................................................................................................................191334.0033400000000000000000000000000001101102000000000000000000000424000000000000000000000000001001000010000200000030000102040000000000110000612000001002000000170000000000000003290310211014050000009481000040200200000000000000019160412010000000000420210000010300040000212071000020000902140300007322511020401015034000018000010005061054357100100
...............................................................................................................................................CCTGTAGATCCGAATTTGTT..............................................................................................................................201334.00334000000000000000000000000000000000010000000000010000000000000000000000000000000000022000000000000000020000000000000001001000000000000000000011300100001000000000000000030001000200050000000211100020400000010000000000001411000110000000003170100000000000030300070210000000072734391200002200112150100011020422002008000020002511261182319000300
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTC...................................................................................241325.0032500000000000000000000000000000000000000010000000000010000000000000000000000000000106270001030000110001130000000001100000000000010000010000000010000000040000000000000000200000202021100000004002000004000000100000000000086000102000000481700120010000300100030000160540000000020110401000030053812000300215046000021820001000807111351280000000
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTTT...................................................................................231293.00293000000001000000000000010000000000000000000001100000000000000000000000000000000000003000000000000010000000000000000001000000100000000000000000000000001000000000000000330001110100350000001130200010400000000000000000024300000010000000002001200000000000201001200100000000041600010000191428710160101801533008029000010009012202065178001200
.....................................................................................................................................................................................ACAAATTCGGTTCTAGAGAGGTTT....................................................................................241289.0028900001001020000000000000000000000000000000000000000000000250000000000000000000000020040000020101130008000000000012000000000000000000000000000107000000000000000000000031010002030002000000060200004020000000000000000002220404000000000000430000000010000030100020210000100002061201000032610361044670000601070030461000401010043134693100100
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTA.....................................................................................221288.002880000010001101000010000110000000000000000000000000000000000000000000000000000000001000000201200001000000000000000000020010000010000000000000022000000010000000000000003301000101000100000010103000201000000020000000000137020001010000110001100210003201000001000404400000000030000000000553612011107100260111000002160000000017110222164813001000
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTTC............................................................................................................................241276.002760000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000139136000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................TTATACTAGCT-TTAAGGA...........................................................................................................181258.00258000000000000000000000000000000000000000000000000000000000000000000000000000000000200020000000000100010000000000200000000000001001000000000010100000100000000000000000010100010001000000000101000000000000000000000000012200100000000000007608000001000000100000102100000000000000000000210021038522030000300200000000000000000000001000000
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTAA..................................................................................251237.00237000000000000000000000020000000000000000000100000000000000000000000000000000000000500010000000001200000000000100100100000000000000000000000001020030400000000000000000012010000000001000000031110000035000000000000000002620140002130000000000010000010000001000000012000000009611211010000013412501110000702300242500000000800243263000000
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTTC..................................................................................251225.00225000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000015654000000000000000000000000100000000000000000010000010001010000010001000001000000000200002000000000
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTC.....................................................................................221220.0022000000000000110000000000000000000000000000000000000000000000000000000000000000000010000003020000000000000000000000020000000000001000000000000001000000000000000000000012010010000404000000911100002000000000000000000000360000000000002000100100000000000000000030310000000002022501000035846231204010019115900000600001000806111061015001100
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTC.............................................................................................................................231212.002120000000000000000000001000000000000000000000000000000000000000000000000000000000000001000010000000000100000000000001000000001000000000000000013810000000000000000000000100000000000200000000000000105000000000000000000033000000000000261700430200000200100020000060300000000019010614000020001149310110001021001007000010109011511293000300
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTAT...................................................................................241203.00203000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000100000000000000000000000000100000000000000000000000001000000000000000010000000001000000000000000000200000000000000000001000000000000010921000000000000000000100000001000000000021301010000022210000000000005100000900001000207457015000000
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGC......................................................................................211197.001970000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000001000000001000000000000000000000003200000001040300000000100000100000000000000000000132000000000000600000000000021010004000016071000000000310030200001462412022071000210158100005000020003065536104000000
.........................................................................................................................................................................................ATTCGGTTCTAGAGAGGTTT....................................................................................201194.00194000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000010000000000000102000010002010000000000000000000000000000000000000460310071201000000001110000010000000000000000000011721000000000000000040000000000010001010000010000000003150604010000121011115200300002041000003000001000103051374000000
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGG......................................................................................211191.0019100000000000000000000000000000000000000000000000010000000000000000000000000000000000000001000000010000000000000000000000000000000000000000001000000000000000000000000011010001001647000000000000000000000000000000000000410000000000000000210000000000300030200060650000100010100010000012142110007200100000120121500000100001000000111224000000
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTAC...................................................................................241168.00168000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013329000000000000000000000000000000000000000000000000000000000010000000100000100000000002010000000000
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGGT......................................................................................201165.00165000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000110000010100000000001020200010100000000000000000031313000000000000000000000000020000002000005033000000000200000000003312216312000008033000007000030009071278465000000
.............................................................................................................................................ACCCTGTAGATCCGAATTTGA...............................................................................................................................211162.0016200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000013010010010005100000200000001020000000000000000000530000000000003000200000000100000000100040000000000018140702000023311033320411009052300010910000000001110023000000
droEre2
TGCCCAG-CGC--------------------------------------------------AGT------------TCATTTCGC-C-CCTCCGA--------C-GT----TCCTCA------TCAGTTTGCTCTACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATCGGAA---------------AAG-----TGAAGCTGATGTCAAGCGGAAAAGTGAT--------TTSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTT..............................................................................................................................221238423.00238423489036282094810865102365125220
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTT....................................................................................231130742.0013074275348188149151450266147469132
.............................................................................................................................................ACCCTGTAGATCCGAATTTGT...............................................................................................................................21118168.0018168416124781632949770122280
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTT.....................................................................................22116487.0016487701922422861494892188415
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTT....................................................................................2216342.00634259264636307459
..............................................................................................................................................CCCTGTAGATCCGAATTTGTT..............................................................................................................................2114621.0046214584140012110
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTT.............................................................................................................................2314585.0045851445472177722593132
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTC..............................................................................................................................2214023.00402328391511059100
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTT...................................................................................2413262.0032621286137293113284510
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGT......................................................................................2112492.002492879127602511092920
.............................................................................................................................................ACCCTGTAGATCCGAATTTG................................................................................................................................2011587.001587627151678009527
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGG.......................................................................................2011396.001396427122887311900
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTC....................................................................................231719.00719345812012900
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTT.....................................................................................211606.006065314106190
..............................................................................................................................................CCCTGTAGATCCGAATTTGT...............................................................................................................................201379.00379376100020
.............................................................................................................................................ACCCTGTAGATCCGAATTTGC...............................................................................................................................211356.00356234801410
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTA...................................................................................241348.003481861143121212
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAG........................................................................................191345.00345111455190300
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTA.............................................................................................................................231323.00323905902159130
........................................................................................................................................................................................AATTCGGTTCTAGAGAGGTTT....................................................................................211321.0032129511101130
...............................................................................................................................................CCTGTAGATCCGAATTTGTT..............................................................................................................................201241.00241192121418140
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTA..............................................................................................................................221158.001583586052840
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTA....................................................................................231149.001496401017670
..............................................................................................................................................CCCTGTAGATCCGAATTTGTTT.............................................................................................................................221141.00141136102200
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTTT...................................................................................231138.001381130012220
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTG....................................................................................231102.001024120006350
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTG...................................................................................241101.00101810201440
.............................................................................................................................................ACCCTGTAGATCCGAATTT.................................................................................................................................19191.00915321120140
......................................................................................................................................................................................CAAATTCGGTTCTAGAGA.........................................................................................18186.00862781915260
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTC...................................................................................24178.00784316111250
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTC.....................................................................................22178.007846900230
.........................................................................................................................................................................................ATTCGGTTCTAGAGAGGTTT....................................................................................20177.007759602910
.............................................................................................................................................ACCCTGTAGATCCGAATTTGG...............................................................................................................................21168.006857600410
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGGT......................................................................................20167.006756100820
.....................................................................................................................................................................................ACAAATTCGGTTCTAGAGAGGTTT....................................................................................24166.006644622930
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTAA............................................................................................................................24161.0061241003510
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTC.............................................................................................................................23159.00591722031250
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTG.............................................................................................................................23149.0049323011120
.............................................................................................................................................ACCCTGTAGATCCGAATTTT................................................................................................................................20146.004632400820
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTTT............................................................................................................................24144.0044113012441
............................................................................................................................................TACCCTGTAGATCCGAATTTG................................................................................................................................21143.004300000043
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTG..............................................................................................................................22142.004221517710
..........................................................................................................................................................................................TTCGGTTCTAGAGAGGTTT....................................................................................19141.004133600200
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGG.......................................................................................19138.0038210001610
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGG......................................................................................21137.003730211300
............................................................................................................................................TACCCTGTAGATCCGAATTTGTT..............................................................................................................................23135.003532300000
..............................................................................................................................................CCCTGTAGATCCGAATTTG................................................................................................................................19134.003434000000
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTA.....................................................................................22133.0033160101240
........................................................................................................................................................................................AATTCGGTTCTAGAGAGGTT.....................................................................................20132.003230000200
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTAA..................................................................................25130.003017000850
............................................................................................................................................TACCCTGTAGATCCGAATTTGT...............................................................................................................................22130.003031011024
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTTA...................................................................................23127.002722100400
............................................................................................................................................TACCCTGTAGATCCGAATTT.................................................................................................................................20127.002710000026
.............................................................................................................................................ACCCTGTAGATCCGAATT..................................................................................................................................18125.002584001120
.................................................................................................................................................TGTAGATCCGAATTTGTT..............................................................................................................................18125.002591001140
..............................................................................................................................................CCCTGTAGATCCGAATTTGTG..............................................................................................................................21125.002525000000
................................................................................................................................................CTGTAGATCCGAATTTGTT..............................................................................................................................19125.002516001440
...........................................................................................................................................................................................TCGGTTCTAGAGAGGTTT....................................................................................18120.002020000000
.............................................................................................................................................ACCCTGTAGATCCGAATTTGGC..............................................................................................................................22119.001951400000
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTGG..................................................................................25117.001717000000
droYak3
TGCCCAG-CGA--------------------------------------------------AGT------------TCATTTCGC-C-CCTGCGACGA-ACTGACGT----TCCTCA------TCACTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGTT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATCGGAA---------------AAG-----TGAAGCTGATGTCAAGCGGAAAAGTGAT--------GTSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTT..............................................................................................................................221803250.008032504626199907403141959359515151658512227
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTC..............................................................................................................................22172243.00722436720721073225100000
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTT....................................................................................23371583.3321475037195264213660527275861915152573951887412
.............................................................................................................................................ACCCTGTAGATCCGAATTTGT...............................................................................................................................21130913.0030913255918832431545717328212440000
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTT.............................................................................................................................2318319.0083195246472511798213440000
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTT.....................................................................................2237005.672101723455805855216816047834023226112
.............................................................................................................................................ACCCTGTAGATCCGAATTTGC...............................................................................................................................2114684.0046841700450821210000
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTC....................................................................................2332283.0068493416678520470010
..............................................................................................................................................CCCTGTAGATCCGAATTTGTT..............................................................................................................................2112093.00209316186419870170000
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTT....................................................................................2231531.3345943414132716313890020
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGT......................................................................................2131356.674070276118896434491531335200510
.............................................................................................................................................ACCCTGTAGATCCGAATTTG................................................................................................................................2011082.001082443324204101122680000
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTC.............................................................................................................................231719.007192770431110000
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTA..............................................................................................................................221576.0057622453951050000
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGG.......................................................................................203407.6712234939211010103259050250
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTA.............................................................................................................................231381.003815164229821260000
.............................................................................................................................................ACCCTGTAGATCCGAATTTT................................................................................................................................201372.003720137000010000
.............................................................................................................................................ACCCTGTAGATCCGAATTTGAC..............................................................................................................................221288.002880028800000000
.............................................................................................................................................ACCCTGTAGATCCGAATTTGG...............................................................................................................................211252.0025216208810010000
...............................................................................................................................................CCTGTAGATCCGAATTTGTT..............................................................................................................................201227.0022738013030290000
.............................................................................................................................................ACCCTGTAGATCCGAATTTGGC..............................................................................................................................221212.002120021200000000
............................................................................................................................................TACCCTGTAGATCCGAATTTGT...............................................................................................................................221198.0019810717701030000
.............................................................................................................................................ACCCTGTAGATCCGAATTT.................................................................................................................................191186.00186302312621220000
..............................................................................................................................................CCCTGTAGATCCGAATTTGTTT.............................................................................................................................221178.0017895110770040000
..............................................................................................................................................CCCTGTAGATCCGAATTTGT...............................................................................................................................201173.001738154900200000
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTC.....................................................................................223171.6751529447010380000
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTT.....................................................................................213166.00498845912102160000
.............................................................................................................................................ACCCTGTAGATCCGAATT..................................................................................................................................181138.0013853374700100000
............................................................................................................................................TACCCTGTAGATCCGAATTTGTT..............................................................................................................................231134.001342259960110000
........................................................................................................................................................................................AATTCGGTTCTAGAGAGGTTT....................................................................................213113.00339025256003280000
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTG..............................................................................................................................221111.001117574410110000
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAG........................................................................................19396.3328926913371416710130
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTG...................................................................................24177.00772538201110000
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGC......................................................................................21368.6720615118210160000
.............................................................................................................................................ACCCTGTAGATCCGAATTTGCC..............................................................................................................................22166.0066006410010000
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTA...................................................................................24364.67194011535626290010
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTG.............................................................................................................................23157.00575222800020000
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTAA............................................................................................................................24153.00532671200080000
................................................................................................................................................CTGTAGATCCGAATTTGTT..............................................................................................................................19152.0052053571040000
.....................................................................................................................................................................................ACAAATTCGGTTCTAGAGAGGTTT....................................................................................24350.3315114410030030000
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTG....................................................................................23348.6714651112601120000
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTTT............................................................................................................................24140.0040023611000000
............................................................................................................................................TACCCTGTAGATCCGAATTTGC...............................................................................................................................22137.0037003700000000
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTC...................................................................................24334.3310318156312130000
..........................................................................................................................................................................................TTCGGTTCTAGAGAGGTTT....................................................................................19331.67950533900030000
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGGT......................................................................................20330.6792281000090000
..............................................................................................................................................CCCTGTAGATCCGAATTTG................................................................................................................................19130.0030129000000000
droEug1
TGCTCAC-CTG--------------------------------------------------AGC------------TCATTCAGC-CGCCTGCGA--------CTGTTAGGTCTCCT------TCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTACTCTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATGTTCATCGATA-GCCGAA---TACG-----------------------------GAAGTGAA--------ATSizeHit CountTotal NormTotal
No Reads
droBia1
TGCGCGCCCTG--------------------------------------------------AGC------------TCCCTTCGC-C-CCTGCGA--------CTGC----TCGCCT------CCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTGTATACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATGTCCATCGTAAAACGCAT-----TTTG---------------------AGTGAAAAAG--AA--------ATSizeHit CountTotal NormTotal
No Reads
droTak1
TGCCCACCCTG--------------------------------------------------AGT------------TCACTTCGC-C-CCTGCGA--------CTGC----TCTCCT------TCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATCGATA-AAACAT-----TTAAAG-----TGAAACTGAAATGAAGTGAAAAAGTGAA--------ACSizeHit CountTotal NormTotal
No Reads
droEle1
TGCTCAC-CTC--------------------------------------------------AGT------------TCATTTCGC-C-GCTGCGA--------CTGC----TCCCCT------TCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTACATTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCAGCGAAA-TAGCATGAT--TTCAAA-----TGAAGCCGAAATCAAGTGACAAAGTGAA--------TTSizeHit CountTotal NormTotal
No Reads
droRho1
TGCTCAC-CTC--------------------------------------------------CGT------------TCATTTCAC-C-CATGCGACGCGA---CTGT----TCTCCT------TCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTACATTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTCCAATATCCATCGATA-AATC----------AAA-----AGAAGCCGGAATCAAGTGAAAAAGTGAA--------TTSizeHit CountTotal NormTotal
No Reads
droFic1
TGCTCAC-CTG--------------------------------------------------AGTCACT-G----CGTCATTTCAA-C-CCGGCGA--------CTGC----TCCCCTCCAGTTTCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATGTCCATCGAAA---------------AA-----------------------------GTGATCTCAGCTGATSizeHit CountTotal NormTotal
No Reads
droKik1
TGCTCAC-CTG--------------------------------------------------CCTCACCTGACT---TCATTATCC-C-GCAGCGG--------CTGT----TCAGCG------CCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGTT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCAACGTAA-AATCATAATTA--AAAC-----TAAA-ACGAAACC--------AAGTGA-----------SizeHit CountTotal NormTotal
No Reads
droAna3
TGCCCAC-CGC---------------------------------------------------CTCACCCAACACCG---T--CACAC-CTTGCGG--------CTGT--GCTCCTAT------CCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGTT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATTTCCATCGTAA---------------AATAAAAGTGTT--TAA----------TGAAGTGAT--------TGSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTT..............................................................................................................................221107386.001073863065425704251927181923626555
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTT....................................................................................23172010.007201037540119114792054165363490
.............................................................................................................................................ACCCTGTAGATCCGAATTTGT...............................................................................................................................21110625.0010625405414119343619912640
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTT.....................................................................................22110012.001001238278683952335241231
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTT...................................................................................2414130.0041301220161818114171143
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTT.............................................................................................................................2313914.0039141462256341017831278
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTT....................................................................................2213125.00312529404331410421
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGT......................................................................................2113098.0030988029072281757214
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTC..............................................................................................................................2212941.002941512837241829
..............................................................................................................................................CCCTGTAGATCCGAATTTGTT..............................................................................................................................2112785.0027852761110076
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGG.......................................................................................2011659.00165948522280963107
.............................................................................................................................................ACCCTGTAGATCCGAATTTG................................................................................................................................2011543.001543113920453225102
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTC....................................................................................231656.00656762213221
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAG........................................................................................191368.003681031052319532
..............................................................................................................................................CCCTGTAGATCCGAATTTGT...............................................................................................................................201367.0036736410011
.............................................................................................................................................ACCCTGTAGATCCGAATTTGC...............................................................................................................................211346.00346432103153
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTT.....................................................................................211344.00344317211185
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTA...................................................................................241207.002071331414478
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTA.............................................................................................................................231205.002058563112926
........................................................................................................................................................................................AATTCGGTTCTAGAGAGGTTT....................................................................................211203.00203172260140
...............................................................................................................................................CCTGTAGATCCGAATTTGTT..............................................................................................................................201191.0019116781096
..............................................................................................................................................CCCTGTAGATCCGAATTTGTTT.............................................................................................................................221159.00159140200512
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTTT...................................................................................231132.00132112101135
.............................................................................................................................................ACCCTGTAGATCCGAATTT.................................................................................................................................191115.00115561193234
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTG..............................................................................................................................221114.0011410530213
..............................................................................................................................................CCCTGTAGATCCGAATTTG................................................................................................................................191105.0010510400001
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTC.....................................................................................22181.00817670151
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTG....................................................................................23176.00762314152211
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTTT............................................................................................................................24172.0072212041332
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTA..............................................................................................................................22167.006735210074
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTG...................................................................................24162.00624910282
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTA....................................................................................23160.006029207202
.............................................................................................................................................ACCCTGTAGATCCGAATTTGA...............................................................................................................................21158.005820013619
......................................................................................................................................................................................CAAATTCGGTTCTAGAGA.........................................................................................18153.005320118347
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGGT......................................................................................20152.00524600150
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTC.............................................................................................................................23151.005115330021
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTAA............................................................................................................................24147.00473141083
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTC...................................................................................24142.004219801113
............................................................................................................................................TACCCTGTAGATCCGAATTTGT...............................................................................................................................22142.004213163055
............................................................................................................................................TACCCTGTAGATCCGAATTTGTT..............................................................................................................................23142.00423210144
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTG.............................................................................................................................23140.00403321103
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGG.......................................................................................19139.00393500040
...........................................................................................................................................................................................TCGGTTCTAGAGAGGTTT....................................................................................18139.00393630000
.........................................................................................................................................................................................ATTCGGTTCTAGAGAGGTTT....................................................................................20139.00393080010
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGA......................................................................................21139.00392000334
.....................................................................................................................................................................................ACAAATTCGGTTCTAGAGAGGTTT....................................................................................24138.00382490050
.............................................................................................................................................ACCCTGTAGATCCGAATT..................................................................................................................................18138.003826100002
................................................................................................................................................CTGTAGATCCGAATTTGTT..............................................................................................................................19133.00332431041
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGC......................................................................................21133.003311903100
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTA.....................................................................................22131.003116101103
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTAA..................................................................................25127.00272000142
...............................................................................................................................................CCTGTAGATCCGAATTTGT...............................................................................................................................19125.00252310001
..........................................................................................................................................................................................TTCGGTTCTAGAGAGGTTT....................................................................................19124.00242030010
.................................................................................................................................................TGTAGATCCGAATTTGTT..............................................................................................................................18123.0023600197
.............................................................................................................................................ACCCTGTAGATCCGAATTTT................................................................................................................................20120.0020431147
........................................................................................................................................................................................AATTCGGTTCTAGAGAGGTT.....................................................................................20119.00191520110
.............................................................................................................................................ACCCTGTAGATCCGAATTTGAC..............................................................................................................................22118.00180170001
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTTA...................................................................................23116.00161600000
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTTAT.................................................................................26115.0015200166
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTG.....................................................................................22115.00151400100
.............................................................................................................................................ACCCTGTAGATCCGAATTTGG...............................................................................................................................21114.0014111191
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTTA..................................................................................25113.0013800023
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGT.......................................................................................20113.00133000100
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGG......................................................................................21112.00120002100
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTA....................................................................................22111.00111100000
.............................................................................................................................................ACCCTGTAGATCCGAATTTGGC..............................................................................................................................22111.00110101000
droBip1
TGCCTGC-CTT------------------------------------------------------GCCCGACACCG---T--CACAC-CTTGCAA--------CTGT----TCCTAT------CCAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGTT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATATCCATCGTAA---------------AAGAAGAGTGTT-----------TTGTTAAAGTGTT--------TGSizeHit CountTotal NormTotal
No Reads
dp5
TGCTCAC-CTCTCGGCGCCCTCGGGCATGGCACCGGGCTCCACACCCCGTCCTCTGCAGGCAGT------------TTTTTTG----------------------G-----TTC--T------CAAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTACATTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATGTACAACGAAA-ACAGATAGTTATTAAAG-----TGAA---------AAGTGATAAAGTG------------SizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTT..............................................................................................................................221206200.002062002076662428518149231807833241838516992026090
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTT....................................................................................231149614.0014961470176579438454367326231501697014338559
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTT.....................................................................................22126194.0026194631143713865109034880446761911379
.............................................................................................................................................ACCCTGTAGATCCGAATTTGT...............................................................................................................................21115428.001542882168313172538463523160586171372
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTC..............................................................................................................................22111179.00111796161069441323621000
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTT....................................................................................2216521.00652126212121131712142002
..............................................................................................................................................CCCTGTAGATCCGAATTTGTT..............................................................................................................................2116275.0062751561673658142100
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGT......................................................................................2115847.005847612996269114842331449910622
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGG.......................................................................................2013705.0037051326005825267879533104
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTT...................................................................................2413651.00365114153133810574901488425
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTC....................................................................................2313630.00363012234131771511000
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTT.............................................................................................................................2313018.003018251525730971543835139455
.............................................................................................................................................ACCCTGTAGATCCGAATTTG................................................................................................................................2012404.002404751933367157612743128
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTT.....................................................................................2111183.00118301121743638022
.............................................................................................................................................ACCCTGTAGATCCGAATTTGC...............................................................................................................................211712.00712157572110133001
..............................................................................................................................................CCCTGTAGATCCGAATTTGT...............................................................................................................................201617.00617261100011002
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAG........................................................................................191584.005841427731413111206
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTC.....................................................................................221389.003891531267004000
........................................................................................................................................................................................AATTCGGTTCTAGAGAGGTTT....................................................................................211384.003840368142000000
...............................................................................................................................................CCTGTAGATCCGAATTTGTT..............................................................................................................................201344.003442314111517012
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTA.............................................................................................................................231341.00341211451015152229120
............................................................................................................................................TACCCTGTAGATCCGAATTTGT...............................................................................................................................221333.00333161031091224910121325
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTA...................................................................................241302.00302119732310747005
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTA..............................................................................................................................221279.0027911722814639001
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGGT......................................................................................201254.00254024300019001
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGG.......................................................................................191217.00217020800018000
..............................................................................................................................................CCCTGTAGATCCGAATTTG................................................................................................................................191186.00186018600000000
..............................................................................................................................................CCCTGTAGATCCGAATTTGTTT.............................................................................................................................221179.001790155103803000
............................................................................................................................................TACCCTGTAGATCCGAATTTGTT..............................................................................................................................231159.0015958837410311001
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTC.............................................................................................................................231157.001571291173104200
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTTT...................................................................................231152.001520131201018000
.............................................................................................................................................ACCCTGTAGATCCGAATTT.................................................................................................................................191124.00124108283601608
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGC......................................................................................211107.00107297517013000
...........................................................................................................................................................................................TCGGTTCTAGAGAGGTTT....................................................................................181106.0010609952000000
.............................................................................................................................................ACCCTGTAGATCCGAATT..................................................................................................................................181106.00106265860400417
..........................................................................................................................................................................................TTCGGTTCTAGAGAGGTTT....................................................................................19196.009608844000000
.........................................................................................................................................................................................ATTCGGTTCTAGAGAGGTTT....................................................................................20196.0096179101113000
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTG...................................................................................24188.008807230229000
.....................................................................................................................................................................................ACAAATTCGGTTCTAGAGAGGTTT....................................................................................24185.0085063131007001
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTC...................................................................................24183.0083223397514200
......................................................................................................................................................................................CAAATTCGGTTCTAGAGA.........................................................................................18174.007405231752004
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTA....................................................................................23166.0066041110247100
............................................................................................................................................TACCCTGTAGATCCGAATTTG................................................................................................................................21165.006534920315002
.............................................................................................................................................ACCCTGTAGATCCGAATTTGAC..............................................................................................................................22160.006000600000000
................................................................................................................................................CTGTAGATCCGAATTTGTT..............................................................................................................................19155.005504920202000
........................................................................................................................................................................................AATTCGGTTCTAGAGAGGTT.....................................................................................20155.005505400001000
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTG....................................................................................23153.005306414011000
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTG.............................................................................................................................23150.005034030001003
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTA.....................................................................................22149.0049235010110000
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTAA............................................................................................................................24143.0043102162102001
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTTT............................................................................................................................24140.004002752015000
.............................................................................................................................................ACCCTGTAGATCCGAATTTGGC..............................................................................................................................22135.003500341000000
.................................................................................................................................................TGTAGATCCGAATTTGTT..............................................................................................................................18131.003112310202002
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTG..............................................................................................................................22128.002813701111013
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTAA..................................................................................25127.0027012001310001
............................................................................................................................................TACCCTGTAGATCCGAATTTGC...............................................................................................................................22127.002700242000100
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTTA...................................................................................23124.002401830002001
...............................................................................................................................................CCTGTAGATCCGAATTTGT...............................................................................................................................19123.002302200001000
..........................................................................................................................................................................................TTCGGTTCTAGAGAGGTT.....................................................................................18123.002302110100000
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGT.......................................................................................20123.002301610015000
.........................................................................................................................................................................................ATTCGGTTCTAGAGAGGTT.....................................................................................19122.002202110000000
.............................................................................................................................................ACCCTGTAGATCCGAATTTGG...............................................................................................................................21122.002212160201000
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAG........................................................................................18122.002202100100000
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGA......................................................................................21118.001801200012003
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTTG...................................................................................23116.001601330000000
.............................................................................................................................................ACCCTGTAGATCCGAATTTT................................................................................................................................20113.00130471001000
droPer2
TGCTCAC-CTCTCGGCGCCCTCGGGCTTGGCACCGGGCTCCACACCCCGTTCTCTGCAGGCAGT------------TTTTTTG----------------------G-----TTC--T------CAAGTTTGCTCCACGTCTACCCTGTAGATCCGAATTTGTTTTACATTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGTTCAATGTACAACGAAA-ACAGATAGTTATTAAAG-----TGAA---------AAGTGATAAAGTG------------SizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTT..............................................................................................................................22154754.005475413316793529661022391225603
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTT....................................................................................23129652.0029652591710002768158037447641
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTT.....................................................................................2216958.006958174217491134379391978
.............................................................................................................................................ACCCTGTAGATCCGAATTTGT...............................................................................................................................2115574.00557419976961041777611839
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGT......................................................................................2111868.0018683504042190265738
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGG.......................................................................................2011019.0010191934862283541
..............................................................................................................................................CCCTGTAGATCCGAATTTGTT..............................................................................................................................211879.0087912472911222
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTT...................................................................................241869.00869461641350148448
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTT....................................................................................221864.008645790892329
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTT.............................................................................................................................231711.00711101123301157389
.............................................................................................................................................ACCCTGTAGATCCGAATTTG................................................................................................................................201522.0052219612582271100
............................................................................................................................................TACCCTGTAGATCCGAATTTGT...............................................................................................................................221288.0028824310731015
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTA.............................................................................................................................231210.002101512012828
.............................................................................................................................................ACCCTGTAGATCCGAATTT.................................................................................................................................191190.00190170123014
.............................................................................................................................................ACCCTGTAGATCCGAATT..................................................................................................................................181163.00163151101010
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAG........................................................................................191158.001581058981459
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTT.....................................................................................211148.00148312902410
.............................................................................................................................................ACCCTGTAGATCCGAATTTGG...............................................................................................................................211119.0011911800010
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTC..............................................................................................................................221106.0010673121299
..............................................................................................................................................CCCTGTAGATCCGAATTTGT...............................................................................................................................20190.009020680002
...............................................................................................................................................CCTGTAGATCCGAATTTGTT..............................................................................................................................20176.0076104812213
.............................................................................................................................................ACCCTGTAGATCCGAATTTGC...............................................................................................................................21167.00676500011
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTA...................................................................................24162.0062123431417
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTG..............................................................................................................................22159.005928241132
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTC....................................................................................23152.00523222376
........................................................................................................................................................................................AATTCGGTTCTAGAGAGGTTT....................................................................................21145.00450440100
............................................................................................................................................TACCCTGTAGATCCGAATTTGTT..............................................................................................................................23142.004217111256
..............................................................................................................................................CCCTGTAGATCCGAATTTGTTT.............................................................................................................................22140.004022120114
............................................................................................................................................TACCCTGTAGATCCGAATTTG................................................................................................................................21139.00393150111
......................................................................................................................................................................................CAAATTCGGTTCTAGAGA.........................................................................................18136.00367138143
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGGT......................................................................................20136.00360330012
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTC...................................................................................24135.00353120011
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTAA............................................................................................................................24134.00343210001
.................................................................................................................................................TGTAGATCCGAATTTGTT..............................................................................................................................18131.003115600010
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTA..............................................................................................................................22130.00308130234
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGG.......................................................................................19129.00290290000
................................................................................................................................................CTGTAGATCCGAATTTGTT..............................................................................................................................19125.00255621110
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGG......................................................................................21121.00211800030
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTC.....................................................................................22120.00201610003
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTG...................................................................................24120.00204130021
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGC......................................................................................21120.00201610012
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTTT...................................................................................23117.00170130031
.........................................................................................................................................................................................ATTCGGTTCTAGAGAGGTTT....................................................................................20116.0016291103
..............................................................................................................................................CCCTGTAGATCCGAATTTG................................................................................................................................19115.00151140000
...............................................................................................................................................CCTGTAGATCCGAATTTGT...............................................................................................................................19114.0014840110
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTG.............................................................................................................................23114.0014480002
............................................................................................................................................TACCCTGTAGATCCGAATTTGG...............................................................................................................................22114.00141400000
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTA....................................................................................23114.0014060035
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTG.....................................................................................22113.0013460030
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTA.....................................................................................22112.0012050142
..........................................................................................................................................................................................TTCGGTTCTAGAGAGGTTT....................................................................................19111.00110100001
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTG....................................................................................23111.0011710120
.....................................................................................................................................................................................ACAAATTCGGTTCTAGAGAGGTTT....................................................................................2419.009410112
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGT.......................................................................................2019.009420012
........................................................................................................................................................................................AATTCGGTTCTAGAGAGGTT.....................................................................................2018.008080000
........................................................................................................................................................................................AATTCGGTTCTAGAGAGG.......................................................................................1817.007060001
............................................................................................................................................TACCCTGTAGATCCGAATTTGC...............................................................................................................................2217.007600010
..............................................................................................................................................CCCTGTAGATCCGAATTT.................................................................................................................................1817.007610000
...........................................................................................................................................................................................TCGGTTCTAGAGAGGTTT....................................................................................1816.006060000
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTAA..................................................................................2515.005020003
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTC.............................................................................................................................2314.004120010
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTTT............................................................................................................................2414.004100003
droWil2
T---------------------------------------------------------------------------------------------------------------------------CGCTTTGTTCTACGTCTACCCTGTAGATCCGAATTTGTTTTATACTAGTTTTTAAGGACAAATTCGGTTCTAGAGAGGTTTAAGTGGTTCAATGTTCTACAAACAAACCAA-----AAAAAG-----TAACAACAATAACAA--------GTGAC--------AASizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTT..............................................................................................................................221263241.0026324114990177121161319989419032
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTT....................................................................................23181969.00819697722305456283342893130
.............................................................................................................................................ACCCTGTAGATCCGAATTTGT...............................................................................................................................21117650.001765075552050116653971482
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTT.....................................................................................22117478.00174786857462817223382889
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGT......................................................................................2114828.0048288301869949868312
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTT.............................................................................................................................2313374.0033741835942911854452
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTT....................................................................................2212623.002623323534520814
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTT...................................................................................2412395.002395130677485849254
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGG.......................................................................................2012139.0021391461003529239222
.............................................................................................................................................ACCCTGTAGATCCGAATTTG................................................................................................................................2011943.00194312983879211353
..............................................................................................................................................CCCTGTAGATCCGAATTTGTT..............................................................................................................................2111671.0016713316012269
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAG........................................................................................191499.00499142841106031
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTA.............................................................................................................................231397.00397155331018415
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTT.....................................................................................211356.00356830214248
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTC..............................................................................................................................221348.0034811081718231
.............................................................................................................................................ACCCTGTAGATCCGAATTTGG...............................................................................................................................211323.003233210011
.............................................................................................................................................ACCCTGTAGATCCGAATTTGC...............................................................................................................................211295.0029527512143
.............................................................................................................................................ACCCTGTAGATCCGAATTT.................................................................................................................................191207.00207862918110
..............................................................................................................................................CCCTGTAGATCCGAATTTGT...............................................................................................................................201204.002048192103
.............................................................................................................................................ACCCTGTAGATCCGAATT..................................................................................................................................181199.00199164130202
...................................................................................................................................................................TTATACTAGTTTTTAAGGA...........................................................................................................191186.001860101823
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGGT......................................................................................201169.001691152682
...............................................................................................................................................CCTGTAGATCCGAATTTGTT..............................................................................................................................201166.00166219573310
........................................................................................................................................................................................AATTCGGTTCTAGAGAGGTTT....................................................................................211157.0015711391160
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTA...................................................................................241149.0014918512447
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTC....................................................................................231125.001257889228
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTC.............................................................................................................................231124.00124442572424
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTCC............................................................................................................................241123.001231066407
......................................................................................................................................................................................CAAATTCGGTTCTAGAGA.........................................................................................181111.001114574379
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTTT..................................................................................251103.00103130291627
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTC...................................................................................24183.00835316653
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGG.......................................................................................19180.0080074231
..............................................................................................................................................CCCTGTAGATCCGAATTTGTTT.............................................................................................................................22173.0073956161
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTC.....................................................................................22170.0070564415
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTA....................................................................................23165.00652379143
..........................................................................................................................................................................................TTCGGTTCTAGAGAGGTTT....................................................................................19163.0063259101
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTA..............................................................................................................................22161.00618533213
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTAA............................................................................................................................24160.0060399282
...........................................................................................................................................................................................TCGGTTCTAGAGAGGTTT....................................................................................18159.0059059000
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGC......................................................................................21159.0059443660
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTTT...................................................................................23157.0057047451
.................................................................................................................................................TGTAGATCCGAATTTGTT..............................................................................................................................18156.005618133211
.........................................................................................................................................................................................ATTCGGTTCTAGAGAGGTTT....................................................................................20155.0055145054
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGG......................................................................................21151.0051442311
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTG.............................................................................................................................23144.00442212271
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTG...................................................................................24141.0041723380
..............................................................................................................................................CCCTGTAGATCCGAATTTG................................................................................................................................19140.0040039100
.............................................................................................................................................ACCCTGTAGATCCGAATTTT................................................................................................................................20138.0038052292
................................................................................................................................................CTGTAGATCCGAATTTGTT..............................................................................................................................19131.0031663124
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTA.....................................................................................22130.00304141011
...................................................................................................................................................................TTATACTAGTTTTTAAGGAA..........................................................................................................20129.0029000290
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAG........................................................................................18129.0029027101
...............................................................................................................................................CCTGTAGATCCGAATTTGTTTT............................................................................................................................22128.0028200260
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTCCC...........................................................................................................................25128.0028261001
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTTT............................................................................................................................24127.0027172143
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTCC..................................................................................25126.00261401011
...............................................................................................................................................CCTGTAGATCCGAATTTGTTT.............................................................................................................................21125.0025341116
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTG..............................................................................................................................22123.00231200110
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTAT..................................................................................25123.002331766
........................................................................................................................................................................................AATTCGGTTCTAGAGAGGTT.....................................................................................20122.0022021001
.....................................................................................................................................................................................ACAAATTCGGTTCTAGAGAGGTTT....................................................................................24122.0022013270
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTTTATACT.......................................................................................................................29121.0021210000
...............................................................................................................................................CCTGTAGATCCGAATTTGT...............................................................................................................................19121.0021109110
....................................................................................................................................................................................GACAAATTCGGTTCTAGAGAGGT......................................................................................23120.0020001172
............................................................................................................................................TACCCTGTAGATCCGAATTTGTT..............................................................................................................................23119.0019414010
..........................................................................................................................................................................................TTCGGTTCTAGAGAGGTT.....................................................................................18116.0016115000
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGT.......................................................................................20116.0016411100
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTG.....................................................................................22113.001372103
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTAA..................................................................................25113.001314242
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTTTT.................................................................................26113.001302641
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTTA............................................................................................................................24112.001243131
........................................................................................................................................................................................AATTCGGTTCTAGAGAGGT......................................................................................19112.001209300
.....................................................................................................................................................................................ACAAATTCGGTTCTAGAGAGGT......................................................................................22111.001102360
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAA........................................................................................19111.001104700
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTCC....................................................................................23110.001090001
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTG....................................................................................23110.001043210
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTCA............................................................................................................................2419.00941103
........................................................................................................................................................................................AATTCGGTTCTAGAGAGG.......................................................................................1819.00908010
.........................................................................................................................................................................................ATTCGGTTCTAGAGAGGTT.....................................................................................1919.00908010
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGA......................................................................................2119.00907002
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTCCC.................................................................................2618.00820105
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGA.......................................................................................2017.00702203
....................................................................................................................................................................................GACAAATTCGGTTCTAGAGAGG.......................................................................................2216.00601041
droVir3
TAC--AC-CTG--------------------------------------------------TGT------------GTATTGCCA-C----GCGT--------CTAG-------GTT------TCACTTTGTTCCACGTCCACCCTGTAGATCCGAATTTGTTGTACACTAGTT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTCTGTGGCTCATTGTCCAGCGAAT---------------AT-----------------------------GTG------------SizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTT..............................................................................................................................221419015.00419015825411817736409604953220921530624541601857218012546031349146393636220929555144654337145432132027353420725828715365495135450103612407044529111494901986581643710498193041813411558158291259410011761313524878418469563206041711924363466023106131675145676369060914599274748545934126
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTT....................................................................................231110936.001109362610171018365222322335561918160100340312003916279119412009292242577934564523861964411673271632297164911217475373991155146159137327267292591349695504313439342364283445290722061418207581016514649539139179817345404912311196147
.............................................................................................................................................ACCCTGTAGATCCGAATTTGT...............................................................................................................................21137649.003764934609578971641244231522175710146125314032850525046115874821036955130325619112621146658122130139105305266304643565100097663410617441365103229457448209163218201234256711099642721941479553582448430424
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTT.....................................................................................22121220.002122018091398390923744448122810114302621002412361505189429751175719501732672262113544784161246405645549840114906979611671502766461843835540015251511127782217861631273161
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTC.............................................................................................................................23116889.0016889856661417032230060000101921514316291423332269131601900006148723188152333207195319494100010537408596844603706996056830103092222125603521768704991621327347
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGT......................................................................................21116683.001668340018946538131060247465000129412910816914711031222141721211643463161489411051014380113224589211622231022141331211721531373685873019202284289561373516418233245
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGG.......................................................................................20115205.001520514062707423863515964800100221228033615322113149173803910415365020211101013220116610117317596305254131151830161317101633295668
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTT.............................................................................................................................2319659.009659172172428281217312613001703617263831373115122193172911150140063212311203315610420118114132023037438825430528532426938717472089511041222214710262923111328317305160149
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTC..............................................................................................................................2213885.003885821263307052004100012102105520010440101000011330101446537815916926184710714230030116251755523311
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTT...................................................................................2413157.00315731143413143123111300011065431823762155143501153735142123114510139000025447612568867113614150121802212105200213353
.............................................................................................................................................ACCCTGTAGATCCGAATTTG................................................................................................................................2012657.002657801353339160610050000302618283931153374003039440100000025012151432687511419173289138197030102162054433251117433
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTA.............................................................................................................................2312328.00232871121920103000001060031704922030121002013411127845379081721341132101298310992362869395503200411811533230363618942311723
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTT....................................................................................2212030.002030251550810300100000141241768012455005241524240010020000011111213022000621515005101001000001000
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTGTACACTAGTT-TTAAGGA...........................................................................................................4011784.0017840000000000000000000000000000000000000000044138111935911119937726643546627201766300000000000000000000
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTGTACACTAGTT-TTAAGG............................................................................................................3911512.00151200000000000000000000000000000000000000002001188011986691756411094586354104440200000000000000000000
............................................................................................................................................CACCCTGTAGATCCGAATTTGTT..............................................................................................................................2311405.001405104249600000010003201100142000003030000000114422235344279549747356655214203229015122000624150002578642224
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTC....................................................................................2311302.0013022819199302100000002004001121000102000100000800195101148102316133844943312700000044140900010
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTCC............................................................................................................................2411056.00105629452313200000000000011013000022000700001500120144373256534142325540833710030000012974711141500210
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTGTACACTAGTT-TTAAGGAA..........................................................................................................411903.009030000000000000000000000000000000000000000011937261583163305241274030651228000000000000000000000
..............................................................................................................................................CCCTGTAGATCCGAATTTGTT..............................................................................................................................211866.00866211719900000100000101010010000001000000000200222124537641243562620400010001000011220
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAG........................................................................................191818.008188529910032001000018144565052020110710320110001132000000000000000021052228600410027032003013
............................................................................................................................................CACCCTGTAGATCCGAATTTGT...............................................................................................................................221700.007001988280010010000022021014000000000020000031127922231518214542254124101418166215000012224310231252013
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGG.......................................................................................191654.006540060800000000001000000000000000000000000030000000000001000000223500100001000000000
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTAA............................................................................................................................241538.005381714200100000001000000110001011102011200002513464961511689318280041800311914432714452212943271528
.............................................................................................................................................ACCCTGTAGATCCGAATT..................................................................................................................................181520.0052078202030210000000111211012000000100010000001137353210910731052019267630000000019412827301411000
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGGT......................................................................................201476.004760042020100000000100120000000000100000000040000010000100101000043600000000000000000
.............................................................................................................................................ACCCTGTAGATCCGAATTTGC...............................................................................................................................211447.00447147501231001011000001010000100000000000000001000000010000100100301300000000000001000
.............................................................................................................................................ACCCTGTAGATCCGAATTTGG...............................................................................................................................211433.0043332267130000000000000000001000000000010000000100000000202213541500100000001000001000
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTT.....................................................................................211397.0039700323120000000000100323011000100000000000010000000010000100011004400000010000000000
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTCA............................................................................................................................241386.003869031102000000000100001020110020000001032231328202713135838831733030006221611251226224101543
...............................................................................................................................................CCTGTAGATCCGAATTTGTT..............................................................................................................................201356.00356823290000010000102100001000000000000000051114591162222157713810513020500201004800001210
.............................................................................................................................................ACCCTGTAGATCCGAATTT.................................................................................................................................191259.002594827133000000000043305204310000021000000000010000100000000119302200001019241524171400033
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTG..............................................................................................................................221249.00249143040000012000000000000000000000010000030002134354411597843797035000000010000091043
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTA..............................................................................................................................221244.0024472462000000000000001001100001000002100003010306824172164652433114000241005010373212
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTC...................................................................................241234.0023410794806000000001000111111001012020100000401032125698877911302670800000002153200000
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTC.....................................................................................221209.00209341641262000000000000100002100000110010000000000000000000000100001100000011400100010
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGC......................................................................................211203.00203251271281000000000100010010000000000000000010000000000000000000081800000000000000000
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTA...................................................................................241201.002011157100000000000633872049100101302030130040000000011000201001465200002000000001000
......................................................................................................................................................................................CAAATTCGGTTCTAGAGA.........................................................................................181180.00180135530110000000352521015210010712030000080000000000020002010924011062461411410015
........................................................................................................................................................................................AATTCGGTTCTAGAGAGGTTT....................................................................................211143.001430010917000000000010100000100010100000000001000000000100000220210200000000000100000
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTA.....................................................................................221132.00132623800020000000000212011300310000010000010000000000000000111025000023100020120002
.................................................................................................................................................TGTAGATCCGAATTTGTT..............................................................................................................................181121.00121121200003170000001000000100000000030000080121354360421424021600200000202300112054
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTG.............................................................................................................................231116.00116153970020000000001020000100000100000000010011025191721522021710200000016120200100
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTCC.............................................................................................................................231109.00109150230000000000000000001100000000010000020000101001102021181612000000000101528300000
..............................................................................................................................................CCCTGTAGATCCGAATTTGT...............................................................................................................................20193.009352770000000000000101000100000000000000000000000000000100010200000000000200000000
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGG......................................................................................21192.009237201230000000000000000000000000000000000010000000000000001100101600000000000000000
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTG...................................................................................24189.0089723630000000000521201007000000100000000030000000100000000000231102000000000000000
................................................................................................................................................CTGTAGATCCGAATTTGTT..............................................................................................................................19188.008842821010010000100121011100000100010000013000012101013112180940200000000200010222
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTGTACACTAGTT-TTAAG.............................................................................................................38188.008800000000000000000000000000000000000000000001936770683840102500000000000000000000
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTA....................................................................................23187.0087101930000000000202421032100011110000000030000010000000000000003800000010000000000
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTG....................................................................................23181.00819512230000000000000100013100000010000100010000001100100000112221200000000000000000
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTTT...................................................................................23181.0081002960000000000300002042000100001010000030000100000000000000112501000000000000000
............................................................................................................................................CACCCTGTAGATCCGAATTTGTTC.............................................................................................................................24170.0070000100000000000000000000000000000000000000002021011462132023000000000000001010100
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTCCC...........................................................................................................................25169.006960100000000000000000000300000001000000000000000000013001298000000000621106900000
..........................................................................................................................................................................................TTCGGTTCTAGAGAGGTTT....................................................................................19169.0069124040000000000100010000000000100000000020000100000000001100000110200000000010000
.........................................................................................................................................................................................ATTCGGTTCTAGAGAGGTTT....................................................................................20165.006500345000010000011002002610000011000000100000000000010000120000112100000000000000
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTTC..................................................................................25160.006020070000000000000000001000001000000000000007201053440011111410200000010100000000
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGA......................................................................................21151.0051301900000000000000000000000000000000000020000100000010000010012000000030000000000
........................................................................................................................................................................................AATTCGGTTCTAGAGAGG.......................................................................................18145.004500440000000000000000000000000001000000000000000000000000000000000000000000000000
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTTA............................................................................................................................24144.004420100000000000000000001000000000100000000011101120110200101000600020002001004110
.............................................................................................................................................ACCCTGTAGATCCGAAT...................................................................................................................................17143.0043000000000000000000000000000000000000000000001000100010011153700000010200000000010
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTGTACACTAGTT-TTAAGGAG..........................................................................................................41141.004100000000000000000000000000000000000000000001134252431010001400000000000000000000
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTTC............................................................................................................................24139.003900040000000000000000000100000200000000000000020003222221111200000000000001000100
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTTCC...........................................................................................................................25136.003610010000000000000000000000000000000000000001100011111124031500000000000011000000
...........................................................................................................................................................................................TCGGTTCTAGAGAGGTTT....................................................................................18136.003600332000000000000000000000000000000000000000000000000000000000010000000000000000
......................................................................................................................................................................................CAAATTCGGTTCTAGAG..........................................................................................17132.00320000000000000000000000000000000000000000100101101111002667300000000000000000000
..............................................................................................................................................CCCTGTAGATCCGAATTTGTTT.............................................................................................................................22129.002910230000000000000000000000000000000000000000000000000210001100000000000000000000
..............................................................................................................................................CCCTGTAGATCCGAATTTG................................................................................................................................19129.002900290000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................CACCCTGTAGATCCGAATTTG................................................................................................................................21127.00279141000000000010000000100000000000000000001000001010020000000200000000000000210
........................................................................................................................................................................................AATTCGGTTCTAGAGAGGTT.....................................................................................20127.002700251000000000000000000000000000000000000000000000000000100000000000000000000000
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTAA....................................................................................23124.002400101000000000100000000000100000000000000000000000000000000011000032000001010002
droMoj3
TGCATGT-CTA--------------------------------------------------AGT------------TC----------------------------------------------CACTCTGTTCCACGTCTACCCTGTAGATCCGAATTTGTTGTACCATAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTATGTGGCTCATTGTCCAGCGAA--------------------------------------------------------------SizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTT..............................................................................................................................221438052.004380522879814157705128037000323109
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTT....................................................................................231323963.00323963709582759975193223011717222
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTC..............................................................................................................................22132440.0032440107111832127186
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTT.....................................................................................22125263.00252636731213220433147842882
.............................................................................................................................................ACCCTGTAGATCCGAATTTGT...............................................................................................................................21118452.00184522799342227407129621715
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTC....................................................................................2319935.00993533624986921
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGT......................................................................................2119328.00932839824119337713703365
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTT.............................................................................................................................2318847.00884776930922457073629
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTT....................................................................................2216883.0068835710225101018118
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGG.......................................................................................2015866.0058662579311313581782589
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTT...................................................................................2415425.00542593017556903217957
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTC.............................................................................................................................2314179.0041799642118192524633
..............................................................................................................................................CCCTGTAGATCCGAATTTGTT..............................................................................................................................2112843.00284326379011942
.............................................................................................................................................ACCCTGTAGATCCGAATTTGC...............................................................................................................................2112280.002280300222723
............................................................................................................................................TACCCTGTAGATCCGAATTTGT...............................................................................................................................2211906.0019068750710170745
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTC.....................................................................................221784.007842001272536
.............................................................................................................................................ACCCTGTAGATCCGAATTTG................................................................................................................................201692.00692371102036124131
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTT.....................................................................................211625.006255340335431
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTA.............................................................................................................................231574.005748282444830
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTC...................................................................................241474.00474147245212104
........................................................................................................................................................................................AATTCGGTTCTAGAGAGGTTT....................................................................................211471.004713050001597
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTA...................................................................................241420.0042012063624243
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTA..............................................................................................................................221403.00403102003829
............................................................................................................................................TACCCTGTAGATCCGAATTTGC...............................................................................................................................221335.0033500003350
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGGT......................................................................................201327.0032730901449
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAG........................................................................................191325.00325164211187123
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTTC............................................................................................................................241244.002441050117364
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGG.......................................................................................191237.00237213011121
..............................................................................................................................................CCCTGTAGATCCGAATTTGT...............................................................................................................................201220.0022021400060
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTG....................................................................................231215.0021591111967
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGC......................................................................................211206.0020670001972
...............................................................................................................................................CCTGTAGATCCGAATTTGTT..............................................................................................................................201199.00199107200837
............................................................................................................................................TACCCTGTAGATCCGAATTTGTT..............................................................................................................................231186.00186387011355
.............................................................................................................................................ACCCTGTAGATCCGAATTTT................................................................................................................................201175.0017530001702
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTCC............................................................................................................................241139.00139422322070
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTTT...................................................................................231134.00134730104614
..........................................................................................................................................................................................TTCGGTTCTAGAGAGGTTT....................................................................................191126.0012658100661
.....................................................................................................................................................................................ACAAATTCGGTTCTAGAGAGGTTT....................................................................................241123.0012368200503
.............................................................................................................................................ACCCTGTAGATCCGAATTTGAC..............................................................................................................................221120.0012001001190
.........................................................................................................................................................................................ATTCGGTTCTAGAGAGGTTT....................................................................................201117.0011754201591
.............................................................................................................................................ACCCTGTAGATCCGAATTT.................................................................................................................................191106.0010636052630
...........................................................................................................................................................................................TCGGTTCTAGAGAGGTTT....................................................................................181103.0010340000630
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTG...................................................................................24197.009764116196
.............................................................................................................................................ACCCTGTAGATCCGAATTTGGC..............................................................................................................................22193.00930000930
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTA....................................................................................23193.0093380123418
..............................................................................................................................................CCCTGTAGATCCGAATTTGTTC.............................................................................................................................22177.00777600010
......................................................................................................................................................................................CAAATTCGGTTCTAGAGA.........................................................................................18174.007446365122
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTA.....................................................................................22169.006929024925
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTCA............................................................................................................................24168.006826101337
..............................................................................................................................................CCCTGTAGATCCGAATTTGTTT.............................................................................................................................22168.00686600020
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTTA...................................................................................23163.006330001293
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTG.............................................................................................................................23162.006215100433
.............................................................................................................................................ACCCTGTAGATCCGAATT..................................................................................................................................18157.005718000390
................................................................................................................................................CTGTAGATCCGAATTTGTT..............................................................................................................................19145.004516630137
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTC....................................................................................22142.00422000400
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTAA............................................................................................................................24140.0040131001511
............................................................................................................................................TACCCTGTAGATCCGAATTTG................................................................................................................................21140.004013212211
.............................................................................................................................................ACCCTGTAGATCCGAATTTGG...............................................................................................................................21137.00370100360
..............................................................................................................................................CCCTGTAGATCCGAATTTGTC..............................................................................................................................21137.003713000240
........................................................................................................................................................................................AATTCGGTTCTAGAGAGGTT.....................................................................................20136.003623000121
............................................................................................................................................TACCCTGTAGATCCGAATTTGTC..............................................................................................................................23136.00364000293
droGri2
TATATAT-ATA--------------------------------------------------TAT------------ACATATAGT-TTATATATA--------CTGT----T----T------TCACTTTGTTCCACGTCTACCCTGTAGATCCGAATTTGTTGTACACTAGCT-TTAAGGACAAATTCGGTTCTAGAGAGGTTTGTGTGGCTCAATGCCCACCGAAA-TGAGT-A-------AAGAATAGTGAA---------TAGTGA-ATAGTGAA----------SizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTT....................................................................................23110470.001047065503920
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTT..............................................................................................................................2214022.00402221041918
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTT.....................................................................................221893.00893493400
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTT....................................................................................221585.0058556124
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTT...................................................................................241334.00334118216
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGT......................................................................................211298.00298126172
.............................................................................................................................................ACCCTGTAGATCCGAATTTGT...............................................................................................................................211260.0026016991
..............................................................................................................................................CCCTGTAGATCCGAATTTGTT..............................................................................................................................211191.001911910
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTT.............................................................................................................................231116.001166947
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGG.......................................................................................20189.00894049
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTT.....................................................................................21156.0056533
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTA...................................................................................24132.00321715
.............................................................................................................................................ACCCTGTAGATCCGAATTTG................................................................................................................................20129.00291910
........................................................................................................................................................................................AATTCGGTTCTAGAGAGGTTT....................................................................................21129.0029290
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTC....................................................................................23127.0027126
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTG....................................................................................23126.0026224
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTA....................................................................................23123.0023122
......................................................................................................................................................................................CAAATTCGGTTCTAGAGA.........................................................................................18120.0020200
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTG...................................................................................24118.0018153
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTTT...................................................................................23117.0017116
..............................................................................................................................................CCCTGTAGATCCGAATTTGT...............................................................................................................................20117.0017170
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAG........................................................................................19114.0014113
...............................................................................................................................................CCTGTAGATCCGAATTTGTT..............................................................................................................................20112.0012120
.........................................................................................................................................................................................ATTCGGTTCTAGAGAGGTTT....................................................................................20112.0012120
..........................................................................................................................................................................................TTCGGTTCTAGAGAGGTTT....................................................................................19111.0011101
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTC...................................................................................2419.00990
.....................................................................................................................................................................................ACAAATTCGGTTCTAGAGAGGTTT....................................................................................2419.00990
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTG.............................................................................................................................2319.00990
...........................................................................................................................................................................................TCGGTTCTAGAGAGGTTT....................................................................................1818.00880
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTA.............................................................................................................................2318.00853
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGG.......................................................................................1917.00770
..............................................................................................................................................CCCTGTAGATCCGAATTTGTTT.............................................................................................................................2217.00770
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGGT......................................................................................2016.00660
........................................................................................................................................................................................AATTCGGTTCTAGAGAGGTT.....................................................................................2013.00330
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTAAA.................................................................................2613.00312
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTA.....................................................................................2213.00312
.............................................................................................................................................ACCCTGTAGATCCGAATTT.................................................................................................................................1913.00330
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTGGC.................................................................................2612.00220
.............................................................................................................................................ACCCTGTAGATCCGAATT..................................................................................................................................1812.00220
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTAA............................................................................................................................2412.00220
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAG........................................................................................1812.00220
........................................................................................................................................................................................AATTCGGTTCTAGAGAGG.......................................................................................1812.00220
............................................................................................................................................TACCCTGTAGATCCGAATTTGTT..............................................................................................................................2312.00220
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTGG............................................................................................................................2412.00220
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTAT...................................................................................2412.00202
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGA......................................................................................2112.00220
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTGGCC................................................................................2712.00220
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTGC..................................................................................2512.00220
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTAA..................................................................................2512.00211
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTC.............................................................................................................................2312.00211
...............................................................................................................................................CCTGTAGATCCGAATTTGT...............................................................................................................................1912.00220
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTGG..................................................................................2512.00220
..........................................................................................................................................................................................TTCGGTTCTAGAGAGGTT.....................................................................................1811.00110
........................................................................................................................................................................................AATTCGGTTCTAGAGAGGTTTT...................................................................................2211.00110
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTAG............................................................................................................................2411.00110
.......................................................................................................................................................................................AAATTCGGTTCTAGAGAGGTTTGTT.................................................................................2511.00110
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTGGCA................................................................................2711.00110
...................................................................................................................................................................GTACACTAGCT-TTAAGGAA..........................................................................................................1911.00110
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTTCT...........................................................................................................................2511.00110
............................................................................................................................................................................................CGGTTCTAGAGAGGTTTA...................................................................................1811.00110
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGC......................................................................................2111.00101
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTTA..................................................................................2511.00110
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTTGTA...........................................................................................................................2511.00101
......................................................................................................................................................................................CAAATTCGGTTCTAGAGAGGTTTAG..................................................................................2511.00110
........................................................................................................................................................................................AATTCGGTTCTAGAGAGGTTTGT..................................................................................2311.00101
.............................................................................................................................................ACCCTGTAGATCCGAATTTGA...............................................................................................................................2111.00101
................................................................................................................................................CTGTAGATCCGAATTTGTTT.............................................................................................................................2011.00101
..............................................................................................................................................CCCTGTAGATCCGAATTTG................................................................................................................................1911.00110
................................................................................................................................................CTGTAGATCCGAATTTGTT..............................................................................................................................1911.00110
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTATG............................................................................................................................2411.00110
.........................................................................................................................................................................................ATTCGGTTCTAGAGAGGTTTT...................................................................................2111.00110
..............................................................................................................................................CCCTGTAGATCCGAATTT.................................................................................................................................1811.00110
...........................................................................................................................................................................................TCGGTTCTAGAGAGGTTTG...................................................................................1911.00110
.............................................................................................................................................ACCCTGTAGATCCGAATTTGTC..............................................................................................................................2211.00110
..............................................................................................................................................CCCTGTAGATCCGAATTTGTTG.............................................................................................................................2211.00110

Generated: 10/20/2015 at 07:46 PM