ID:

dse-bantam

 Coordinate:

scaffold_2:662657-662737 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

3pUTR

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-26.0 -26.0 -26.0

Flybase annnotation

utr3 [utr3_plus_3491]; pre_miRNA [Dsec\bantam-RM]; utr5 [utr5_plus_6230]; miRNA [Dsec\bantam-RA]

No Repeatable elements found

Sense Strand Reads

TCGAGTGAGGAAAAACCGAAAACGAACGAAAAGCGTTTGTAACTCCAATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTTTTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATACCACATTCCACATTCCGATGGTCGATTTTTGTTGTTTGGTGTGC

*************************************************.........((((((.((((((((((..((((((.(((((.......)).))).))))))..)))))))))).))))))...........****************************************** 		Read size # Mismatch Hit Count Total Norm Total V113

male body		 V114

embryo

 V115

head

 M054

female body
.....................................................................................................TGAGATCATTTTGAAAGCTGATT......................................................... 23 0 1 1555332.00 1555332 442750 655609 208933 248040
.....................................................................................................TGAGATCATTTTGAAAGCTGAT.......................................................... 22 0 1 1425771.00 1425771 573987 367894 414214 69676
.....................................................................................................TGAGATCATTTTGAAAGCTGATTT........................................................ 24 0 1 54196.00 54196 14482 8355 24016 7343
.....................................................................................................TGAGATCATTTTGAAAGCTGA........................................................... 21 0 1 38650.00 38650 14418 3021 11142 10069
................................................................CCGGTTTTCGATTTGGTTTGACT.............................................................................................. 23 0 1 24530.00 24530 5375 11791 2484 4880
......................................................................................................GAGATCATTTTGAAAGCTGATT......................................................... 22 0 1 13261.00 13261 68 160 44 12989
.....................................................................................................TGAGATCATTTTGAAAGCTG............................................................ 20 0 1 8831.00 8831 3113 517 2908 2293
.....................................................................................................TGAGATCATTTTGAAAGCCGAT.......................................................... 22 1 1 5650.00 5650 4636 432 566 16
.....................................................................................................TGAGATCATTTTGAAAGCTGATTA........................................................ 24 1 1 4346.00 4346 1624 1074 515 1133
.....................................................................................................TGAGATCATTTTGAAAGCCGATT......................................................... 23 1 1 4290.00 4290 3438 559 222 71
.....................................................................................................TGAGATCATTTTGAAAGCAGAT.......................................................... 22 1 1 4262.00 4262 3765 22 470 5
......................................................................................................GAGATCATTTTGAAAGCTGAT.......................................................... 21 0 1 4043.00 4043 71 59 68 3845
.....................................................................................................TGAGATCATTTTGAAAGCT............................................................. 19 0 1 3481.00 3481 607 872 1586 416
.....................................................................................................TGAGATCATTTTGAAAGCTGATA......................................................... 23 1 1 3435.00 3435 1056 858 524 997
.....................................................................................................TGAGATCATTTTGAAAGCAGATT......................................................... 23 1 1 3039.00 3039 2807 39 189 4
.....................................................................................................TGAGATCATTTTAAAAGCTGATT......................................................... 23 1 1 2618.00 2618 491 934 280 913
.....................................................................................................TGATATCATTTTGAAAGCTGATT......................................................... 23 1 1 2408.00 2408 429 889 355 735
.....................................................................................................TGAGATCATTTTGAAAGCTGGTT......................................................... 23 1 1 2360.00 2360 313 500 137 1410
.....................................................................................................TGAGATCATTTTGAAAGTTGATT......................................................... 23 1 1 2265.00 2265 109 2050 65 41
.....................................................................................................TGAGATCATTTTGAAGGCTGATT......................................................... 23 1 1 2244.00 2244 514 1321 268 141
.....................................................................................................TGAGATAATTTTGAAAGCTGATT......................................................... 23 1 1 2133.00 2133 85 274 421 1353
.....................................................................................................TGAGATCATTTTGAAACCTGATT......................................................... 23 1 1 2108.00 2108 350 1141 191 426
................................................................CCGGTTTTCGATTTGGTTTGAC............................................................................................... 22 0 1 2094.00 2094 566 414 554 560
.....................................................................................................TGAGATCATTTTAAAAGCTGAT.......................................................... 22 1 1 1988.00 1988 688 520 558 222
.....................................................................................................TGAGATCATTTTGAAAGCGGAT.......................................................... 22 1 1 1958.00 1958 1780 25 46 107
.....................................................................................................TGAGATCATTTTGAAGGCTGAT.......................................................... 22 1 1 1873.00 1873 580 747 502 44
.....................................................................................................TGAGATCATTTTGAAAGCGGATT......................................................... 23 1 1 1825.00 1825 1453 33 17 322
.................................................................CGGTTTTCGATTTGGTTTGACT.............................................................................................. 22 0 1 1792.00 1792 137 1065 77 513
.....................................................................................................TGAGATTATTTTGAAAGCTGATT......................................................... 23 1 1 1781.00 1781 133 1391 82 175
.....................................................................................................TGGGATCATTTTGAAAGCTGATT......................................................... 23 1 1 1750.00 1750 407 903 197 243
.....................................................................................................TGAGGTCATTTTGAAAGCTGATT......................................................... 23 1 1 1735.00 1735 427 961 222 125
.....................................................................................................CGAGATCATTTTGAAAGCTGATT......................................................... 23 1 1 1695.00 1695 422 775 179 319
.....................................................................................................TGAGATCATTTTGAAATCTGATT......................................................... 23 1 1 1689.00 1689 270 563 254 602
.....................................................................................................TTAGATCATTTTGAAAGCTGATT......................................................... 23 1 1 1593.00 1593 235 174 182 1002
.....................................................................................................TGAGGTCATTTTGAAAGCTGAT.......................................................... 22 1 1 1573.00 1573 608 543 391 31
.....................................................................................................TGGGATCATTTTGAAAGCTGAT.......................................................... 22 1 1 1563.00 1563 555 573 351 84
.....................................................................................................TGAGATCATTTTGGAAGCTGATT......................................................... 23 1 1 1514.00 1514 349 911 163 91
.....................................................................................................TGAGATAATTTTGAAAGCTGAT.......................................................... 22 1 1 1501.00 1501 121 158 841 381
.....................................................................................................TGAGATCATTTTGAAAGCTGGT.......................................................... 22 1 1 1470.00 1470 413 384 281 392
.....................................................................................................TGACATCATTTTGAAAGCTGATT......................................................... 23 1 1 1453.00 1453 287 417 249 500
.....................................................................................................CGAGATCATTTTGAAAGCTGAT.......................................................... 22 1 1 1447.00 1447 530 444 388 85
.....................................................................................................TGAGATCATTTTGAAAGCTGATC......................................................... 23 1 1 1355.00 1355 585 444 208 118
.....................................................................................................TGAGATCATTTTGAAACCTGAT.......................................................... 22 1 1 1315.00 1315 421 520 251 123
.....................................................................................................TGAGATCATTTTGAAAGCTTATT......................................................... 23 1 1 1313.00 1313 228 403 207 475
.....................................................................................................TGAGATCATTTTGAACGCTGATT......................................................... 23 1 1 1313.00 1313 481 666 142 24
.....................................................................................................TTAGATCATTTTGAAAGCTGAT.......................................................... 22 1 1 1308.00 1308 435 158 419 296
.....................................................................................................TGAGATCATTTTGAGAGCTGATT......................................................... 23 1 1 1306.00 1306 323 765 155 63
.....................................................................................................TGAGATCATTTCGAAAGCTGATT......................................................... 23 1 1 1302.00 1302 366 684 140 112
.....................................................................................................TGAGATCATTTTGAAAGATGATT......................................................... 23 1 1 1289.00 1289 167 277 222 623
.....................................................................................................TGAGATCATTTTGGAAGCTGAT.......................................................... 22 1 1 1248.00 1248 424 500 295 29
.....................................................................................................TGAGATCATTTTGAAAGCTGAA.......................................................... 22 1 1 1242.00 1242 450 179 308 305
.....................................................................................................TGAGATCACTTTGAAAGCTGATT......................................................... 23 1 1 1234.00 1234 384 640 140 70
.....................................................................................................TGAGATCACTTTGAAAGCTGAT.......................................................... 22 1 1 1204.00 1204 464 407 307 26
.....................................................................................................TGAGATCATTTTGAAAGTTGAT.......................................................... 22 1 1 1182.00 1182 154 855 157 16
.....................................................................................................TGAGATCATTTTGAAAGCTGAC.......................................................... 22 1 1 1181.00 1181 536 274 321 50
.....................................................................................................TGAGATCGTTTTGAAAGCTGATT......................................................... 23 1 1 1166.00 1166 265 731 138 32
.....................................................................................................TGAGATCATTTTGAGAGCTGAT.......................................................... 22 1 1 1134.00 1134 418 416 282 18
.....................................................................................................TGATATCATTTTGAAAGCTGAT.......................................................... 22 1 1 1101.00 1101 348 211 367 175
.....................................................................................................TGAGACCATTTTGAAAGCTGATT......................................................... 23 1 1 1092.00 1092 386 456 135 115
.....................................................................................................TGAGATCCTTTTGAAAGCTGAT.......................................................... 22 1 1 1088.00 1088 546 202 280 60
.....................................................................................................TGAGATCCTTTTGAAAGCTGATT......................................................... 23 1 1 1070.00 1070 422 308 121 219
.....................................................................................................TGAGATCATCTTGAAAGCTGATT......................................................... 23 1 1 1051.00 1051 289 576 132 54
.....................................................................................................TGAGATCGTTTTGAAAGCTGAT.......................................................... 22 1 1 1039.00 1039 337 413 278 11
.....................................................................................................TGAGACCATTTTGAAAGCTGAT.......................................................... 22 1 1 1036.00 1036 438 266 288 44
.....................................................................................................TGAGATCATTTCGAAAGCTGAT.......................................................... 22 1 1 1028.00 1028 428 334 232 34
.....................................................................................................TGAGATCATTTTGAAATCTGAT.......................................................... 22 1 1 1020.00 1020 276 222 363 159
.....................................................................................................TGAGATCATTTTGAAAGCTGACT......................................................... 23 1 1 1019.00 1019 372 471 123 53
.....................................................................................................TGAGATCATCTTGAAAGCTGAT.......................................................... 22 1 1 1017.00 1017 396 336 266 19
.....................................................................................................TGAGATCATTTTGAACGCTGAT.......................................................... 22 1 1 972.00 972 480 267 223 2
.....................................................................................................TGAGATCATTTTGAAAGCTATT.......................................................... 22 2 1 967.00 967 211 487 136 133
.....................................................................................................TGAGATCATTTTGAAAGATGAT.......................................................... 22 1 1 936.00 936 193 155 405 183
.....................................................................................................TGCGATCATTTTGAAAGCTGAT.......................................................... 22 1 1 933.00 933 578 157 197 1
.....................................................................................................TGAGATCATTTTGAATGCTGATT......................................................... 23 1 1 893.00 893 106 388 24 375
.....................................................................................................TGAGATCATTCTGAAAGCTGATT......................................................... 23 1 1 882.00 882 278 428 114 62
.....................................................................................................TGAGCTCATTTTGAAAGCTGATT......................................................... 23 1 1 876.00 876 276 313 105 182
.....................................................................................................TGACATCATTTTGAAAGCTGAT.......................................................... 22 1 1 863.00 863 382 143 194 144
.....................................................................................................TGAAATCATTTTGAAAGCTGATT......................................................... 23 1 1 849.00 849 154 242 146 307
.....................................................................................................TGAGATCATTCTGAAAGCTGAT.......................................................... 22 1 1 843.00 843 377 258 187 21
.....................................................................................................TGAGATCATTTTGAAAGCTGCTT......................................................... 23 1 1 826.00 826 395 300 120 11
.....................................................................................................TCAGATCATTTTGAAAGCTGAT.......................................................... 22 1 1 803.00 803 347 178 262 16
.....................................................................................................TGAGATCATTTTGAAAGCTGCT.......................................................... 22 1 1 800.00 800 402 153 245 0
.....................................................................................................TGAGATTATTTTGAAAGCTGAT.......................................................... 22 1 1 786.00 786 177 393 162 54
.....................................................................................................TGAGATCATTTTCAAAGCTGATT......................................................... 23 1 1 776.00 776 240 388 100 48
.....................................................................................................TGAGATCATTTTGAAAGCTAAT.......................................................... 22 1 1 776.00 776 139 110 409 118
.....................................................................................................TGAGATCATTTTGAAAGCTAATT......................................................... 23 1 1 767.00 767 130 211 200 226
.....................................................................................................TGAGATCATTTTCAAAGCTGAT.......................................................... 22 1 1 748.00 748 269 251 216 12
.....................................................................................................TAAGATCATTTTGAAAGCTGAT.......................................................... 22 1 1 740.00 740 209 125 347 59
.....................................................................................................TGAGCTCATTTTGAAAGCTGAT.......................................................... 22 1 1 735.00 735 370 149 176 40
.....................................................................................................TGAGATCATTTTGAAAGCTCATT......................................................... 23 1 1 712.00 712 223 291 137 61
.....................................................................................................TGAGATCATTTTTAAAGCTGATT......................................................... 23 1 1 706.00 706 121 165 131 289
.....................................................................................................TGAAATCATTTTGAAAGCTGAT.......................................................... 22 1 1 683.00 683 188 141 261 93
.....................................................................................................TCAGATCATTTTGAAAGCTGATT......................................................... 23 1 1 680.00 680 246 306 81 47
.....................................................................................................TAAGATCATTTTGAAAGCTGATT......................................................... 23 1 1 657.00 657 135 216 151 155
.....................................................................................................TGAGATCATTTTGAAAACTGATT......................................................... 23 1 1 653.00 653 130 301 60 162
................................................................CCGGTTTTCGATTTGGTTTGA................................................................................................ 21 0 1 650.00 650 176 64 134 276
.....................................................................................................TGCGATCATTTTGAAAGCTGATT......................................................... 23 1 1 647.00 647 350 213 73 11
.....................................................................................................TGAGATCATATTGAAAGCTGATT......................................................... 23 1 1 646.00 646 49 411 139 47
.....................................................................................................TGAGATCATTTTGAAAGCTTAT.......................................................... 22 1 1 639.00 639 136 85 241 177
.....................................................................................................TGAGATCATTTTGACAGCTGATT......................................................... 23 1 1 632.00 632 223 355 50 4
................................................................CCGGTTTTCGATTTGGTTTGACTT............................................................................................. 24 1 1 630.00 630 322 5 75 228
.....................................................................................................TGAGATCATTTTTAAAGCTGAT.......................................................... 22 1 1 616.00 616 139 112 254 111
.....................................................................................................TGAGATCATTTTGAAAGCTCAT.......................................................... 22 1 1 597.00 597 223 119 221 34
.....................................................................................................GGAGATCATTTTGAAAGCTGATT......................................................... 23 1 1 593.00 593 71 129 111 282
.....................................................................................................TGAGATCATTTTGAAAGC.............................................................. 18 0 1 591.00 591 1 344 117 129
.....................................................................................................TGAGATCAATTTGAAAGCTGATT......................................................... 23 1 1 591.00 591 44 357 98 92
.....................................................................................................AGAGATCATTTTGAAAGCTGATT......................................................... 23 1 1 578.00 578 41 92 131 314
.....................................................................................................TGAGATCATTTTGACAGCTGAT.......................................................... 22 1 1 578.00 578 269 189 119 1
.....................................................................................................TGAGATCATTTTGAAAACTGAT.......................................................... 22 1 1 565.00 565 217 185 126 37
.....................................................................................................TGAGAACATTTTGAAAGCTGAT.......................................................... 22 1 1 539.00 539 69 33 415 22
.....................................................................................................TGAGATCATTTTGATAGCTGATT......................................................... 23 1 1 529.00 529 39 310 20 160
....................................................................................................GTGAGATCATTTTGAAAGCTGAT.......................................................... 23 0 1 527.00 527 58 409 23 37
.....................................................................................................TGAGATCATTTTGCAAGCTGAT.......................................................... 22 1 1 503.00 503 238 135 129 1
.....................................................................................................TGAGATCATTTTGAATGCTGAT.......................................................... 22 1 1 498.00 498 108 226 61 103
.....................................................................................................TGAGATCATTTTGCAAGCTGATT......................................................... 23 1 1 491.00 491 182 237 64 8
.....................................................................................................TGAGATCATTTTGTAAGCTGATT......................................................... 23 1 1 482.00 482 46 263 27 146
......................................................................................................GAGATCATTTTGAAAGCTGA........................................................... 20 0 1 480.00 480 4 2 7 467
.......................................................................................................TGATCATTTTGAAAGCTGATT......................................................... 21 1 1 480.00 480 52 303 46 79
.....................................................................................................TGAGATCATATTGAAAGCTGAT.......................................................... 22 1 1 480.00 480 46 184 237 13
.....................................................................................................AGAGATCATTTTGAAAGCTGAT.......................................................... 22 1 1 452.00 452 62 61 252 77
.....................................................................................................TGAGATCAATTTGAAAGCTGAT.......................................................... 22 1 1 419.00 419 55 167 175 22
.....................................................................................................TGAGATCATTTTGAAAGCTGATTC........................................................ 24 1 1 416.00 416 97 85 63 171
.....................................................................................................TGAGAACATTTTGAAAGCTGATT......................................................... 23 1 1 415.00 415 46 68 208 93
....................................................................................................CTGAGATCATTTTGAAAGCTGATT......................................................... 24 1 1 401.00 401 35 79 18 269
.....................................................................................................GGAGATCATTTTGAAAGCTGAT.......................................................... 22 1 1 386.00 386 73 71 178 64
......................................................................................................GAGATCATTTTGAAAGCTGATTT........................................................ 23 0 1 382.00 382 1 1 1 379
.....................................................................................................TGAGATCTTTTTGAAAGCTGATT......................................................... 23 1 1 365.00 365 53 267 22 23
.....................................................................................................TGAGTTCATTTTGAAAGCTGATT......................................................... 23 1 1 323.00 323 50 226 26 21
.....................................................................................................TGAGATCATTATGAAAGCTGATT......................................................... 23 1 1 301.00 301 24 206 49 22
.....................................................................................................TGAGATCATTTTGAAAGCTGTTT......................................................... 23 1 1 300.00 300 74 156 38 32
.......................................................................................................AGATCATTTTGAAAGCTGATT......................................................... 21 0 1 299.00 299 6 34 3 256
.....................................................................................................TGAGATCATTTTGATAGCTGAT.......................................................... 22 1 1 297.00 297 53 152 34 58
.....................................................................................................TGAGATCATTATGAAAGCTGAT.......................................................... 22 1 1 278.00 278 29 135 111 3
.....................................................................................................TGAGATCATTTTGTAAGCTGAT.......................................................... 22 1 1 277.00 277 63 139 39 36
.....................................................................................................TGAGATCATTTTGAAAGCTGAAT......................................................... 23 1 1 270.00 270 34 78 94 64
.....................................................................................................TGAGATCTTTTTGAAAGCTGAT.......................................................... 22 1 1 260.00 260 74 143 35 8
.....................................................................................................TGTGATCATTTTGAAAGCTGAT.......................................................... 22 1 1 237.00 237 87 84 59 7
.....................................................................................................TGTGATCATTTTGAAAGCTGATT......................................................... 23 1 1 234.00 234 51 131 32 20
.....................................................................................................TGAGATCATTTTGAAAGCTGT........................................................... 21 1 1 222.00 222 88 4 81 49
.......................................................................................................TGATCATTTTGAAAGCTGAT.......................................................... 20 1 1 220.00 220 49 112 39 20
.....................................................................................................TGAGATCATTTAGAAAGCTGATT......................................................... 23 1 1 215.00 215 19 105 41 50
....................................................................................................TTGAGATCATTTTGAAAGCTGATT......................................................... 24 1 1 215.00 215 0 0 0 215
................................................................CCGGTTTTCGATTTGGTTTGACTA............................................................................................. 24 1 1 211.00 211 103 7 79 22
....................................................................................................CTGAGATCATTTTGAAAGCTGAT.......................................................... 23 1 1 211.00 211 48 48 46 69
.....................................................................................................TGAGATCATTTTGAAAGCTGATG......................................................... 23 1 1 207.00 207 52 51 26 78
.....................................................................................................TGAGATCATTTGGAAAGCTGATT......................................................... 23 1 1 203.00 203 25 10 5 163
.....................................................................................................TGAGATCATTTTGAAAGCTGATTG........................................................ 24 1 1 202.00 202 30 16 21 135
....................................................................................................GTGAGATCATTTTGAAAGCTGATT......................................................... 24 0 1 195.00 195 7 84 5 99
.....................................................................................................TGAGATCATTTTGAAAGCTGAAA......................................................... 23 2 1 191.00 191 50 41 23 77
.....................................................................................................TGAGATCATTTTGAAAGCTGTT.......................................................... 22 1 1 173.00 173 67 41 49 16
.....................................................................................................TGAGTTCATTTTGAAAGCTGAT.......................................................... 22 1 1 172.00 172 58 65 46 3
................................................................CCGGTTTTCGATTTGGTTTG................................................................................................. 20 0 1 157.00 157 35 12 44 66
.....................................................................................................TGAGATCATTTTGAAAGCTGATTTT....................................................... 25 0 1 148.00 148 49 5 47 47
.....................................................................................................TGAGATCATTTTGAAAGCCGATTT........................................................ 24 1 1 148.00 148 101 11 33 3
.....................................................................................................TGAGATGATTTTGAAAGCTGATT......................................................... 23 1 1 148.00 148 22 81 12 33
.....................................................................................................TGAGATCATTTTGAAAGCTGAG.......................................................... 22 1 1 142.00 142 47 37 38 20
.....................................................................................................TGAGATCATTTAGAAAGCTGAT.......................................................... 22 1 1 141.00 141 26 53 38 24
.......................................................................................................AGATCATTTTGAAAGCTGAT.......................................................... 20 0 1 137.00 137 10 36 26 65
.........................................................................................................ATCATTTTGAAAGCTGAT.......................................................... 18 0 1 136.00 136 44 32 42 18
.....................................................................................................TGAGAGCATTTTGAAAGCTGATT......................................................... 23 1 1 136.00 136 28 16 2 90
.....................................................................................................TGAGATCATTTTGAAAGCCGA........................................................... 21 1 1 134.00 134 116 6 8 4
.....................................................................................................TGAGATCATTTTGAAAGCTGATAA........................................................ 24 2 1 118.00 118 17 49 8 44
.....................................................................................................TGAGATGATTTTGAAAGCTGAT.......................................................... 22 1 1 116.00 116 37 44 28 7
....................................................................................................ATGAGATCATTTTGAAAGCTGATT......................................................... 24 1 1 116.00 116 0 1 2 113
.....................................................................................................TGAGATCATTTTGAAAGCTGATTAA....................................................... 25 2 1 115.00 115 14 28 6 67
.....................................................................................................TGAGATCATGTTGAAAGCTGATT......................................................... 23 1 1 112.00 112 18 29 7 58
.....................................................................................................TGAGATCATTTTGAAAGCTGATTAAA...................................................... 26 3 1 112.00 112 6 42 3 61
.....................................................................................................TGAGATAATTTTGAAAGATGATT......................................................... 23 2 1 112.00 112 0 54 6 52
.....................................................................................................TGAGATCATTTTGAAAGCAGATTT........................................................ 24 1 1 111.00 111 88 0 23 0
.....................................................................................................TGAGATCATTTTGAAAGGTGATT......................................................... 23 1 1 109.00 109 34 53 14 8
.........................................................................................................ATCATTTTGAAAGCTGATT......................................................... 19 0 1 106.00 106 9 53 11 33
.....................................................................................................TGAGATCATTTTGAAAGCAGA........................................................... 21 1 1 105.00 105 92 0 13 0
.....................................................................................................TGAGATCATTTTGAAAGGTGAT.......................................................... 22 1 1 105.00 105 48 20 29 8
..........................................................................................................TCATTTTGAAAGCTGATT......................................................... 18 0 1 103.00 103 6 62 3 32
......................................................................................................GATATCATTTTGAAAGCTGATT......................................................... 22 1 1 101.00 101 0 1 0 100
......................................................................................................GAGATCATTTTGAAAGCTG............................................................ 19 0 1 96.00 96 0 0 0 96
.....................................................................................................TGAGATAATTTTGAAAGCTGA........................................................... 21 1 1 95.00 95 6 0 26 63
.....................................................................................................TGAGATCATTTTGAAAGCTGATAT........................................................ 24 1 1 92.00 92 40 10 29 13
.....................................................................................................TGAGATAATTTTGAAAGCTGATTT........................................................ 24 1 1 91.00 91 1 3 50 37
................................................................CCGTTTTTCGATTTGGTTTGACT.............................................................................................. 23 1 1 90.00 90 5 29 8 48
.....................................................................................................TGAGATCATTTTGAAAGCTGG........................................................... 21 1 1 89.00 89 10 5 4 70
......................................................................................................TAGATCATTTTGAAAGCTGAT.......................................................... 21 1 1 89.00 89 28 32 20 9
.................................................................CGGTTTTCGATTTGGTTTGAC............................................................................................... 21 0 1 85.00 85 5 24 4 52
.....................................................................................................TGAGAGCATTTTGAAAGCTGAT.......................................................... 22 1 1 85.00 85 41 9 8 27
.....................................................................................................TGAGATCATTTTAAAAGCTGATTT........................................................ 24 1 1 84.00 84 11 17 30 26
......................................................................................................GAGATCCTTTTGAAAGCTGATT......................................................... 22 1 1 81.00 81 0 0 0 81
......................................................................................................GAGATCATTTTGAAAGCTGAGT......................................................... 22 1 1 79.00 79 0 0 0 79
.....................................................................................................TGAGATCATTTGGAAAGCTGAT.......................................................... 22 1 1 77.00 77 14 9 13 41
................................................................CCTGTTTTCGATTTGGTTTGACT.............................................................................................. 23 1 1 76.00 76 8 30 5 33
.....................................................................................................TGAGATCATTTTGAAGGCTGATTT........................................................ 24 1 1 76.00 76 19 14 38 5
................................................................CCGGCTTTCGATTTGGTTTGACT.............................................................................................. 23 1 1 73.00 73 12 18 3 40
.....................................................................................................TGAGATCATTTTAAAAGCTGA........................................................... 21 1 1 73.00 73 21 3 7 42
.....................................................................................................TGAGATCATTTTGAAAGCTGGTTT........................................................ 24 1 1 72.00 72 9 3 20 40
................................................................CTGGTTTTCGATTTGGTTTGACT.............................................................................................. 23 1 1 71.00 71 6 54 5 6
.....................................................................................................TGAGATCATTTTTAAAGATGATT......................................................... 23 2 1 71.00 71 0 1 0 70
................................................................CCGGTTTTCGATTTGGTTTGACA.............................................................................................. 23 1 1 70.00 70 19 12 11 28
.....................................................................................................TTAGATCATTTTGAAAGCTGATTT........................................................ 24 1 1 67.00 67 9 5 19 34
.....................................................................................................TGATATCATTTTGAAAGCTGA........................................................... 21 1 1 67.00 67 15 5 20 27
.....................................................................................................TGAGATCAGTTTGAAAGCTGAT.......................................................... 22 1 1 66.00 66 18 29 18 1
......................................................................................................TAGATCATTTTGAAAGCTGATT......................................................... 22 1 1 65.00 65 18 21 6 20
.....................................................................................................TGAGATCATTTTGAAAGCGGA........................................................... 21 1 1 65.00 65 45 0 4 16
.....................................................................................................TGATATCATTTTGAAAGCTGATTT........................................................ 24 1 1 64.00 64 16 5 24 19
.....................................................................................................TTAGATCATTTTGAAAGCTGA........................................................... 21 1 1 64.00 64 9 0 9 46
......................................................................................................TGAATCATTTTGAAAGCTGATT......................................................... 22 3 6 60.33 362 40 124 43 155
.....................................................................................................TGAGATCAGTTTGAAAGCTGATT......................................................... 23 1 1 60.00 60 11 39 6 4
................................................................CCGGTTTTCGATTTGGTTCGACT.............................................................................................. 23 1 1 59.00 59 41 12 3 3
........................................................................................................GATCATTTTGAAAGCTGATT......................................................... 20 0 1 59.00 59 3 11 0 45
......................................................................................................GAGCTCATTTTGAAAGCTGATT......................................................... 22 1 1 58.00 58 0 0 0 58
.....................................................................................................TGAGATCATTTTGAAAGCTAT........................................................... 21 2 1 57.00 57 14 11 6 26
.....................................................................................................TGAGGTCATTTTGAAAGCTGATTT........................................................ 24 1 1 57.00 57 9 22 23 3
......................................................................................................GAGATCATTTTGAAAGCTGATTA........................................................ 23 1 1 57.00 57 0 1 0 56
..................................................................GGTTTTCGATTTGGTTTGACT.............................................................................................. 21 0 1 56.00 56 6 12 8 30
.....................................................................................................TGAGATCATTTTGAAAGATGA........................................................... 21 1 1 56.00 56 6 4 12 34
....................................................................................................TTGAGATCATTTTGAAAGCTGAT.......................................................... 23 1 1 55.00 55 0 1 0 54
.....................................................................................................TGAGATCATTTTGAAAGCTT............................................................ 20 1 1 54.00 54 17 4 15 18
.....................................................................................................TGAGATCATGTTGAAAGCTGAT.......................................................... 22 1 1 54.00 54 16 12 12 14
.....................................................................................................TGAGATCACATTGAAAGCTGAT.......................................................... 22 2 1 54.00 54 2 18 34 0
.....................................................................................................CGAGATCATTTTGAAAGCTGATTT........................................................ 24 1 1 53.00 53 16 10 18 9
......................................................................................................GAGATCATTTTGAAAGCTGATA......................................................... 22 1 1 53.00 53 0 0 0 53
.....................................................................................................TGAGATCATTTTGAAAGATGATTT........................................................ 24 1 1 53.00 53 5 7 22 19
.....................................................................................................TGGGATCATTTTGAAAGCTGATTT........................................................ 24 1 1 52.00 52 11 16 17 8
.....................................................................................................TCTGATCATTTTGAAAGCTGAT.......................................................... 22 2 1 52.00 52 7 39 6 0
......................................................................................................TGGATCATTTTGAAAGCTGATT......................................................... 22 2 1 52.00 52 15 32 4 1
.....................................................................................................TGAGATCATTTTGAAAGCTGATTTTT...................................................... 26 1 1 51.00 51 25 3 11 12
.....................................................................................................TGAGATCATTTTGAAAGCGGATTT........................................................ 24 1 1 51.00 51 41 0 2 8
................................................................CCGGTTTTCGATTTGGTTT.................................................................................................. 19 0 1 50.00 50 11 18 16 5
.....................................................................................................TGAGATAATTTTGAAAGATGAT.......................................................... 22 2 1 49.00 49 0 15 12 22
................................................................CCGGTTTTCGATTTGGTTTGGCT.............................................................................................. 23 1 1 49.00 49 4 16 4 25
.....................................................................................................TGAGATCATTTTGAAAGCTGAGT......................................................... 23 1 1 49.00 49 16 13 7 13
................................................................CCGGTTTTCGATTTGGTTAGACT.............................................................................................. 23 1 1 47.00 47 40 2 5 0
.....................................................................................................TGAGATCGTTTTGAAAGCTGATTT........................................................ 24 1 1 47.00 47 10 15 22 0
................................................................CCGGTTTTCGATTTGGGTTGACT.............................................................................................. 23 1 1 46.00 46 3 25 2 16
......................................................................................................GAGATCATTTTGAAAGCTTATT......................................................... 22 1 1 46.00 46 0 0 0 46
................................................................CCGGTTTTCGATTTTGTTTGACT.............................................................................................. 23 1 1 46.00 46 3 21 7 15
.....................................................................................................TGAGATCATTTTGAAAGCTTA........................................................... 21 1 1 45.00 45 4 1 9 31
.....................................................................................................TGAGATCATTGTGAAAGCTGATT......................................................... 23 1 1 45.00 45 4 34 5 2
.....................................................................................................TCTGATCATTTTGAAAGCTGATT......................................................... 23 2 1 44.00 44 2 38 4 0
.....................................................................................................TGAGATCATTTTGAAGGCTGA........................................................... 21 1 1 44.00 44 19 4 11 10
.....................................................................................................TGAGATCACTTTGAAAGCTGATTT........................................................ 24 1 1 44.00 44 11 13 17 3
....................................................................................................ATGAGATCATTTTGAAAGCTGAT.......................................................... 23 1 1 43.00 43 4 4 3 32
.....................................................................................................TGAGATCATTTTGAAAGCTGATCT........................................................ 24 1 1 43.00 43 15 5 19 4
.....................................................................................................TGAGATCATTTTGAAATCTGATTT........................................................ 24 1 1 42.00 42 7 2 20 13
.....................................................................................................CGAGATCATTTTGAAAGCTGA........................................................... 21 1 1 42.00 42 13 9 12 8
.....................................................................................................TGAGATCCTTTTGAAAGCTGA........................................................... 21 1 1 41.00 41 14 6 10 11
.....................................................................................................TGAGGTCATTTTGAAAGCTGA........................................................... 21 1 1 40.00 40 16 9 11 4
........................................................................................................GATCATTTTGAAAGCTGAT.......................................................... 19 0 1 40.00 40 2 22 1 15
................................................................CCGGTTTTCGATTTGGTT................................................................................................... 18 0 1 39.00 39 0 33 0 6
.....................................................................................................TGAGATCATTTTGAATGCTGGTT......................................................... 23 2 1 39.00 39 1 0 0 38
.....................................................................................................TGACATCATTTTGAAAGCTGATTT........................................................ 24 1 1 39.00 39 9 4 11 15
......................................................................................................GAGATCATTTTGAAACCTGATT......................................................... 22 1 1 38.00 38 0 0 0 38
.....................................................................................................TGAGATCATTTCGAAAGCTGATTT........................................................ 24 1 1 38.00 38 12 9 14 3
.....................................................................................................TGAGATCAAATTGAAAGCTGAT.......................................................... 22 2 1 38.00 38 0 1 37 0
.....................................................................................................TGAGATCATTTTGAAAGCTAATTT........................................................ 24 1 1 38.00 38 6 4 23 5
................................................................CCGGTTTTCGCTTTGGTTTGACT.............................................................................................. 23 1 1 37.00 37 8 10 7 12
.....................................................................................................TGAGACCATTTTGAAAGCTGATTT........................................................ 24 1 1 37.00 37 8 9 16 4
.....................................................................................................TGGGATCATTTTGAAAGCTGA........................................................... 21 1 1 37.00 37 15 4 4 14
.....................................................................................................TGAGATCATTTTGAAAGCTAA........................................................... 21 1 1 37.00 37 2 0 12 23
.....................................................................................................TGAGATCATTTTGAAAGAAGAT.......................................................... 22 2 1 36.00 36 1 0 35 0
.....................................................................................................TGAGATCATTGTGAAAGCTGAT.......................................................... 22 1 1 36.00 36 11 13 11 1
......................................................................................................GAGATCATTTTGAAATCTGATT......................................................... 22 1 1 36.00 36 0 1 1 34
................................................................CCGGTTTTCGACTTGGTTTGACT.............................................................................................. 23 1 1 36.00 36 6 19 5 6
................................................................CCGGTTTTTGATTTGGTTTGACT.............................................................................................. 23 1 1 36.00 36 3 28 2 3
.....................................................................................................TGAGATCATTTTGAAATCTGA........................................................... 21 1 1 36.00 36 7 0 8 21
.................................................................CGGTTTTCGATTTGGTTTGA................................................................................................ 20 0 1 35.00 35 1 8 2 24
.....................................................................................................TGAGATCATTTTGGAAGCTGATTT........................................................ 24 1 1 35.00 35 8 8 18 1
.....................................................................................................TGAGATCATTTTGAACGCTGATTT........................................................ 24 1 1 35.00 35 14 11 9 1
.....................................................................................................TGAAATCATTTTGAAAGCTGATTT........................................................ 24 1 1 35.00 35 3 4 15 13
.................................................................CCGTTTTCGATTTGGTTTGACT.............................................................................................. 22 1 1 35.00 35 1 25 2 7
.....................................................................................................TGAGATCATTTTGAAAGCTGCTTT........................................................ 24 1 1 35.00 35 10 5 17 3
.....................................................................................................TGAGATCATTTTTAAAGCTGA........................................................... 21 1 1 35.00 35 6 3 10 16
.....................................................................................................TGAGATCCTTTTGAAAGCTGATTT........................................................ 24 1 1 34.00 34 13 5 13 3
................................................................TCGGTTTTCGATTTGGTTTGACT.............................................................................................. 23 1 1 34.00 34 1 18 1 14
.....................................................................................................TGAGATCACTTTGAAAGCTGA........................................................... 21 1 1 34.00 34 16 2 10 6
.....................................................................................................AAAGATCATTTTGAAAGCTGAT.......................................................... 22 2 1 33.00 33 0 2 31 0
................................................................CCGGGTTTCGATTTGGTTTGACT.............................................................................................. 23 1 1 33.00 33 6 21 1 5
.....................................................................................................TGAGATCATTTTGAAAGCTGATAAA....................................................... 25 3 1 33.00 33 1 19 2 11
................................................................CCGGTTTTCGATTTGTTTTGACT.............................................................................................. 23 1 1 33.00 33 4 11 1 17
................................................................CCGGTTTTCGATTTGGCTTGACT.............................................................................................. 23 1 1 32.00 32 6 22 1 3
......................................................................................................GAGATCATTTTAAAAGCTGATT......................................................... 22 1 1 32.00 32 0 0 0 32
.....................................................................................................TGAGATCATTCTGAAAGCTGATTT........................................................ 24 1 1 32.00 32 7 8 16 1
.....................................................................................................TGAGATCATTTTTAAAGCTGATTT........................................................ 24 1 1 32.00 32 5 2 15 10
.....................................................................................................TGAGATCATTTTGAAACCTGATTT........................................................ 24 1 1 31.00 31 6 7 14 4
.....................................................................................................TGAGATCACATTGAAAGCTGATT......................................................... 23 2 1 31.00 31 4 17 10 0
.....................................................................................................TGAGATCATTTTGAGAGCTGATTT........................................................ 24 1 1 31.00 31 8 8 15 0
....................................................................................................CTGAGATCATTTTGAAAGCTGA........................................................... 22 1 1 31.00 31 5 3 6 17
.....................................................................................................TGAGATCATTTTGAAAGCTTATTT........................................................ 24 1 1 31.00 31 9 1 8 13
.....................................................................................................TGAGATCATAATGAAAGCTGAT.......................................................... 22 2 1 31.00 31 0 1 30 0
......................................................................................................TGGATCATTTTGAAAGCTGAT.......................................................... 21 2 1 31.00 31 16 10 5 0
.....................................................................................................TGAGATCATTTTGAAAGCCG............................................................ 20 1 1 31.00 31 26 2 3 0
.....................................................................................................TGACATCATTTTGAAAGCTGA........................................................... 21 1 1 31.00 31 13 2 6 10
................................................................CCGGTTTTCGATTTGGTTGGACT.............................................................................................. 23 1 1 31.00 31 24 0 0 7
.....................................................................................................TGAGATCATTTTGAAAGCTCATTT........................................................ 24 1 1 30.00 30 7 2 18 3
.....................................................................................................TGAGATTATTTTGAAAGCTGATTT........................................................ 24 1 1 30.00 30 6 9 9 6
.................................................................CCGGTTTCGATTTGGTTTGACT.............................................................................................. 22 2 1 30.00 30 5 20 3 2
................................................................CCGGTTTTCGATTTGGTTTGATT.............................................................................................. 23 1 1 30.00 30 1 27 1 1
......................................................................................................GAGATCATTTTGAAAGCTGAG.......................................................... 21 1 1 30.00 30 0 0 0 30
.....................................................................................................TGAGACCATTTTGAAAGCTGA........................................................... 21 1 1 30.00 30 14 1 10 5
.....................................................................................................TGAGATCATTTTGAAAGCTTT........................................................... 21 2 1 30.00 30 6 15 5 4
.....................................................................................................TGAGATCAATTTGAAAGCTGATTT........................................................ 24 1 1 29.00 29 0 10 17 2
........................................................................................................TATCATTTTGAAAGCTGATT......................................................... 20 1 1 29.00 29 1 14 5 9
.....................................................................................................TGAGATCATTTCGAAAGCTGA........................................................... 21 1 1 29.00 29 12 2 6 9
......................................................................................................GAGATCCTTTTGAAAGCTGAT.......................................................... 21 1 1 29.00 29 0 0 0 29

Anti-sense strand reads

AGCTCACTCCTTTTTGGCTTTTGCTTGCTTTTCGCAAACATTGAGGTTACTAAACTGATGCTTTGGCCAAAAGCTAAACCAAACTGACAAAAAGTATGTTCACTCTAGTAAAACTTTCGACTAAAACAGTTACTTATGGTGTAAGGTGTAAGGCTACCAGCTAAAAACAACAAACCACACG

******************************************.........((((((.((((((((((..((((((.(((((.......)).))).))))))..)))))))))).))))))...........************************************************* 		Read size # Mismatch Hit Count Total Norm Total M054

female body

 V113

male body		 V115

head
........CCATTTTGGATTTTGCTGGC......................................................................................................................................................... 20 3 5 1.80 9 4 4 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droSec2 scaffold_2:662607-662787 + dse-bantam Known_mirbase TC---------------------GAGTG---------------AGGAAAAACCGAAAAC-GAACGAAAAGCGTTTGTAA-----------------------------------------------CTCC-------------AATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCGATGGTCG------------------------------ATTTTTG-----------------TTG-TT---------------TGGTGTGC-------------------
droSim2 3l:606983-607163 + dsi-bantam Known_mirbase TC---------------------GAATG---------------AGGAAAAACGGAAAAC-GAACGAAAAGCGTTTGTAA-----------------------------------------------CTCC-------------AATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCGATGGTCG------------------------------ATTTTTG-----------------TTG-TT---------------TGGTGTGC-------------------
dm3 chr3L:642158-642338 + dme-bantam Known_mirbase TC---------------------GAAAG---------------AGGAAAAACGGAAAAC-GAACGAAAAGCGTTTGTAA-----------------------------------------------CTCC-------------AATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCGATGGTCG------------------------------ATTTTTG-----------------TTG-TT---------------TGGTGTGC-------------------
droEre2 scaffold_4784:648294-648474 + der-bantam Known_mirbase TC---------------------GAAAG---------------AGGAAAAACGGATAGC-GGACGAAAAGCGTTTGTAA-----------------------------------------------CTCC-------------AATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCGATGGTCG------------------------------ATTTTTG-----------------TTG-CT---------------TGCTGTGC-------------------
droYak3 3L:629604-629810 + dya-bantam Known_mirbase TC---------------------GAAAG---------------AGGAAAAACGGAAAGC-GAACGAAAAGCGTTTGTAA-----------------------------------------------CTCC-------------AATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCGATGGTCG------------------------------ATTTT-GTTGTTGTTG----TTG-TTG-CTCGCTGTGCTATACTGTGCTGTGC-------------------
droEug1 scf7180000409184:669272-669467 + TC---------------------GAGAGACGAAAAA-------CGGAAAAGCAGAAAGC-GAATGAAAAACGCTTGTAA-----------------------------------------------CTTC-------------AATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATG-CCACA--------------------------------------TTCCACATTCCAATGCTCG------------------------------ATTTTTG----------TTGTTTGGTG-TT---------------TGGTGTGC-------------------
droBia1 scf7180000300910:717052-717237 + TCGCGATCC---------------ACGG---------------AGGAAAAGCGGAAAAC-GCACGAAGATCGTTCGTAA-----------------------------------------------CTTC-------------AATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCGATGGTCG------------------------------ACT-TTG-----------------TTG-CT---------------TGGCGTGC-------------------
droTak1 scf7180000415846:33334-33529 - TC---------------------AAAAAACAAAAAAAATACAGAGGAAAAACGGAAAAC-GAACGAAAAACGTTTGTAA-----------------------------------------------CTTC-------------AATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCGATGGTCG------------------------------ATTTTTG-----------------TTG-TT---------------TGGTGTGC-------------------
droEle1 scf7180000491249:790131-790311 + TC---------------------AAAAG---------------AGGAAAAACGGAAAAC-GAACGAAAAACGTTTGTTA-----------------------------------------------CTTC-------------AATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCAATGGTTG------------------------------ATTTTTG-----------------TTG-TT---------------TGGTTTGC-------------------
droRho1 scf7180000777258:18680-18860 + TC---------------------AAAAG---------------AGGAAAAACGGAAAAC-GAACGAAAAACGTTTGTAA-----------------------------------------------CTTC-------------AATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCAATGGTTG------------------------------ATTTTTG-----------------TTG-TT---------------TGGTTTGC-------------------
droFic1 scf7180000453052:608671-608856 - TC---------------------A---GAGGAAAAG-------AGGAAAAACGGAAAAC-GAACGAAAAACGTTTGTAA-----------------------------------------------CTTC-------------AATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCAATGGCTG------------------------------ATTTTTG-----------------TTG-TT---------------TGGTGTGC-------------------
droKik1 scf7180000301816:99995-100201 - CT---------------------GTGAGGGGGAAAA-------CGGAAAAGGGAAAAAC-GAACGAAAAACGTTTGTAA-----------------------------------------------CTCC--------------ATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTAATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCGATGTATTTTTTTC---TC-------------------------TTCGTTTTTTGTGTGTTGTTG-TT---------------TGGTGTGC-------------------
droAna3 scaffold_13337:6520531-6520723 - dan-bantam Known_mirbase CG---------------------GAA-----------------AGGAAAAACGGAAAAC-GAACGAAAAACGTTTGTAA--A--------------------------------------------CTCC-------------AATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTTATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCGATGTATTTTTTTTT-TTCT------------------A-------CGTTTTTG--------GTT-TT---------------TTGTGTGC-------------------
droBip1 scf7180000396709:254422-254632 - AC---------------------GGAA----------------AGGAAAAACGGAAAAATGAACGAAAAACGTTTGTAA-----------------------------------------------CTCC-------------AATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-T-TATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCGATGTATTTTTTTTTATTTTACTTTTTTTGGGGTTTTGGTTTTTG-----------------TTGCTT---------------TTGTATGC-------------------
dp5 XR_group8:4603848-4604046 - dps-bantam Known_mirbase TG---------------------G-------------------GGGAAAAACGGAAAAC-GAACGAAAAATGTTTGGGACTA--------------------------------------------CTCCAC----CAATA--TATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTTATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCAATGGTTG------------------------------TTTTT-TTCGTTTTTT----TTTTTTT-TT---------------TTGTGTGC-------------------
droPer2 scaffold_29:844563-844757 - dpe-bantam Known_mirbase TG---------------------G-------------------GGGAAAAACGGAAAAC-GAACGAAAAATGTTTGGGACTA--------------------------------------------CTCCAC----CAATA--TATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTTATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCCATGGTTG------------------------------TTTTT-TTCGTTTTTT--------TTT-TT---------------TTGTGTGC-------------------
droWil2 scf2_1100000004511:10172069-10172272 + dwi-bantam Known_mirbase TC---------------------A------------------------------------------------------T--------------CTTCGTCTACCCTGA-----TGATTTGTTTTTTTTTCATACATT-TTTTTGATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACAGAAAAAAAAAGAAGAAAAAAAAATAACGATCATCATCTTGCCACATTCCGATGG--------------------------------------------------------------------------------CTCTGG-------------------
droVir3 scaffold_13049:5805319-5805458 + dvi-bantam Known_mirbase -------------------------------------------------------------------------------------------------------------------------------------------------TGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTAT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCAATGGT------------------------------------------------------------TT---------------TTGTGTGCCCTGCACACAAGCACACGC
droMoj3 scaffold_6680:4143308-4143440 + dmo-bantam Known_mirbase ------------------------------------------------------------------------------------------------------------------------------------------------ATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTTTTTTATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATAACCACA--------------------------------------TTCCACATCCCAATGGT----------------------------------TTTTG-----------------T------------------------GTGCCCTGCACAC----------
droGri2 scaffold_15110:13265175-13265409 - dgr-bantam Known_mirbase TATGTATGTATGTGTGTACACTCA---------------------------AGGAAAAC-GAACTAAAA-----TGGAA-TATTAAAAGTGCTCTCTCTCT-CTCTAAGTGTGTGCGTCTCTCTGTCTCCAT----CACTACCTATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCAGACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCAATGGT-G------------------------------TTTTTTT-----------------TTG-------------------TGTGTGC-------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSec2
TC---------------------GAGTG---------------AGGAAAAACCGAAAAC-GAACGAAAAGCGTTTGTAA-----------------------------------------------CTCC-------------AATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCGATGGTCG------------------------------ATTTTTG-----------------TTG-TT---------------TGGTGTGC-------------------SizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATT..................................................................................................................................................................................2311555332.001555332248040442750655609208933
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAT...................................................................................................................................................................................2211425771.00142577169676573987367894414214
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTT.................................................................................................................................................................................24154196.0054196734314482835524016
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGA....................................................................................................................................................................................21138650.00386501006914418302111142
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGACT........................................................................................................................................................................................................................23124530.002453048805375117912484
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGATT..................................................................................................................................................................................22113261.0013261129896816044
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTG.....................................................................................................................................................................................2018831.008831229331135172908
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTA.................................................................................................................................................................................2414346.004346113316241074515
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGAT...................................................................................................................................................................................2114043.0040433845715968
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCT......................................................................................................................................................................................1913481.0034814166078721586
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATA..................................................................................................................................................................................2313435.0034359971056858524
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGAC.........................................................................................................................................................................................................................2212094.002094560566414554
..................................................................................................................................................................CGGTTTTCGATTTGGTTTGACT........................................................................................................................................................................................................................2211792.001792513137106577
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATC..................................................................................................................................................................................2311355.001355118585444208
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAA...................................................................................................................................................................................2211242.001242305450179308
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAC...................................................................................................................................................................................2211181.00118150536274321
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGA..........................................................................................................................................................................................................................211650.0065027617664134
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGACTT.......................................................................................................................................................................................................................241630.00630228322575
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGC.......................................................................................................................................................................................181591.005911291344117
......................................................................................................................................................................................................GTGAGATCATTTTGAAAGCTGAT...................................................................................................................................................................................231527.00527375840923
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGA....................................................................................................................................................................................201480.00480467427
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTC.................................................................................................................................................................................241416.00416171978563
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGATTT.................................................................................................................................................................................231382.00382379111
.........................................................................................................................................................................................................AGATCATTTTGAAAGCTGATT..................................................................................................................................................................................211299.002992566343
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGT....................................................................................................................................................................................211222.002224988481
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGACTA.......................................................................................................................................................................................................................241211.0021122103779
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATG..................................................................................................................................................................................231207.0020778525126
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTG.................................................................................................................................................................................241202.00202135301621
......................................................................................................................................................................................................GTGAGATCATTTTGAAAGCTGATT..................................................................................................................................................................................241195.00195997845
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAAA..................................................................................................................................................................................231191.0019177504123
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTG...........................................................................................................................................................................................................................201157.0015766351244
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTT................................................................................................................................................................................251148.001484749547
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAG...................................................................................................................................................................................221142.0014220473738
.........................................................................................................................................................................................................AGATCATTTTGAAAGCTGAT...................................................................................................................................................................................201137.0013765103626
...........................................................................................................................................................................................................ATCATTTTGAAAGCTGAT...................................................................................................................................................................................181136.0013618443242
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATAA.................................................................................................................................................................................241118.001184417498
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAA................................................................................................................................................................................251115.001156714286
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAAA...............................................................................................................................................................................261112.00112616423
...........................................................................................................................................................................................................ATCATTTTGAAAGCTGATT..................................................................................................................................................................................191106.001063395311
............................................................................................................................................................................................................TCATTTTGAAAGCTGATT..................................................................................................................................................................................181103.00103326623
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTG.....................................................................................................................................................................................19196.009696000
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGG....................................................................................................................................................................................21189.0089701054
..................................................................................................................................................................CGGTTTTCGATTTGGTTTGAC.........................................................................................................................................................................................................................21185.0085525244
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGACA........................................................................................................................................................................................................................23170.007028191211
..........................................................................................................................................................................................................GATCATTTTGAAAGCTGATT..................................................................................................................................................................................20159.0059453110
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTAT....................................................................................................................................................................................21157.00572614116
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGATTA.................................................................................................................................................................................23157.005756010
...................................................................................................................................................................GGTTTTCGATTTGGTTTGACT........................................................................................................................................................................................................................21156.0056306128
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTT.....................................................................................................................................................................................20154.00541817415
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGATA..................................................................................................................................................................................22153.005353000
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTTT...............................................................................................................................................................................26151.00511225311
.................................................................................................................................................................CCGGTTTTCGATTTGGTTT............................................................................................................................................................................................................................19150.00505111816
..........................................................................................................................................................................................................GATCATTTTGAAAGCTGAT...................................................................................................................................................................................19140.0040152221
.................................................................................................................................................................CCGGTTTTCGATTTGGTT.............................................................................................................................................................................................................................18139.003960330
..................................................................................................................................................................CGGTTTTCGATTTGGTTTGA..........................................................................................................................................................................................................................20135.003524182
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATAAA................................................................................................................................................................................25133.0033111192
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGAG...................................................................................................................................................................................21130.003030000
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTTT....................................................................................................................................................................................21130.003046155
droSim2
TC---------------------GAATG---------------AGGAAAAACGGAAAAC-GAACGAAAAGCGTTTGTAA-----------------------------------------------CTCC-------------AATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCGATGGTCG------------------------------ATTTTTG-----------------TTG-TT---------------TGGTGTGC-------------------SizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATT..................................................................................................................................................................................2312180426.002180426429571162569374206208482134743587518564217196719119812521919528580118281339756818
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAT...................................................................................................................................................................................221960993.0096099337766814585710462740332457414056133791130174374414132759103826199560112
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGA....................................................................................................................................................................................211421115.004211152348517509735191623551131416291071135112758111795011437156463004
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGACT........................................................................................................................................................................................................................231183520.00183520418151383297394302279720496895720337783133922255531734017
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGC.......................................................................................................................................................................................181133946.001339467135616669141894051921405169689318012035201001
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCT......................................................................................................................................................................................191130564.00130564427247841292413841515018822941211774312412000
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGG....................................................................................................................................................................................21158518.0058518352601496382293100891312200000
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGAC.........................................................................................................................................................................................................................22151132.005113226347807910158325577139785682911529412691006730023
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTG.....................................................................................................................................................................................20146760.004676014745464481491019256995845118113121508118125818011
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATA..................................................................................................................................................................................23146081.004608121881254179614840048284955163091155014801673634000
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTA.................................................................................................................................................................................24132777.003277784554514721424003261315511076750712972561234705000
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTT.................................................................................................................................................................................24122625.002262574662814137044401776133021227304812612241132000
..................................................................................................................................................................CGGTTTTCGATTTGGTTTGACT........................................................................................................................................................................................................................22118939.00189393974803125663083638149318216328728006
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAC...................................................................................................................................................................................22114259.00142599158271819482800283341292007510000
..............................................................................................................................................................................................................ATTTTGAAAGCTGATT..................................................................................................................................................................................16112605.001260500000016137418812314000000
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGACC........................................................................................................................................................................................................................23112354.00123543849948754630022112000000
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAA...................................................................................................................................................................................22111631.001163144262161698310002915271445131820419130102000
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGATT..................................................................................................................................................................................22110776.00107769532161964021542812104333692844002
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAAA...............................................................................................................................................................................2618689.0086899619725200515486344834492919270000
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATC..................................................................................................................................................................................2316968.00696830691011205277004045452149411301000
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGA..........................................................................................................................................................................................................................2113571.0035712508733176347100824118156547017314319004
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGACG........................................................................................................................................................................................................................2313338.003338633340235110061123000000
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATAA.................................................................................................................................................................................2412773.00277351421361460011912090393663467186000
...........................................................................................................................................................................................................ATCATTTTGAAAGCTGATT..................................................................................................................................................................................1912657.00265767101411010021692398300000
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGAT...................................................................................................................................................................................2112501.00250114125581998711480020283000000
.............................................................................................................................................................................................................CATTTTGAAAGCTGATT..................................................................................................................................................................................1712461.0024610000005525512375000000
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAG...................................................................................................................................................................................2212109.00210987164437370004301238400000
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATAAA................................................................................................................................................................................2511947.0019479647100001131238616461731012000
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATG..................................................................................................................................................................................2311917.001917491290561710013511336341612410000
...........................................................................................................................................................................................................ATCATTTTGAAAGCTGAT...................................................................................................................................................................................1811872.0018722251541127961798200000
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAA................................................................................................................................................................................2511827.001827181114899006675542513184414819000
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAAA..................................................................................................................................................................................2311823.0018232171161942260099993723803493839000
.................................................................................................................................................................CCGGTTTTCGATTTGGTT.............................................................................................................................................................................................................................1811758.001758418374441232102217100000
..................................................................................................................................................................CGGTTTTCGATTTGGTTTGACC........................................................................................................................................................................................................................2211356.0013563664594500000000000000
..............................................................................................................................................................................................................ATTTTGAAAGCTGAT...................................................................................................................................................................................1511298.001298000000313161275000000
..................................................................................................................................................................CGGTTTTCGATTTGGTTTGAC.........................................................................................................................................................................................................................2111238.00123830062707272254526521600003
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGACTT.......................................................................................................................................................................................................................2411145.00114570332373370011012103000
............................................................................................................................................................................................................TCATTTTGAAAGCTGATT..................................................................................................................................................................................1811143.0011431213316981521917775200000
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTC.................................................................................................................................................................................2411076.001076121386117900164149142941081901000
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTG...........................................................................................................................................................................................................................201983.009839136164017955613128250115000
...................................................................................................................................................................GGTTTTCGATTTGGTTTGACT........................................................................................................................................................................................................................211877.00877579631162513574569000000
.......................................................................................................................................................................................................TGAGATCATTTTGAAAG........................................................................................................................................................................................171843.0084300000026162037744000000
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGACA........................................................................................................................................................................................................................231823.0082333185011001041092941886541000
...............................................................................................................................................................................................................TTTTGAAAGCTGATT..................................................................................................................................................................................152815.50163100000010920681524000000
..........................................................................................................................................................................................................GATCATTTTGAAAGCTGATT..................................................................................................................................................................................201784.00784401535210102722200000
......................................................................................................................................................................TTTCGATTTGGTTTGACT........................................................................................................................................................................................................................181718.0071820480406000000027100000
.................................................................................................................................................................CCGGTTTTCGATTTGGTTT............................................................................................................................................................................................................................191703.007034017182491311111000001
..........................................................................................................................................................................................................GATCATTTTGAAAGCTGAT...................................................................................................................................................................................191613.00613357247010000538100000
......................................................................................................................................................................................................GTGAGATCATTTTGAAAGCTGAT...................................................................................................................................................................................231613.006131334428723122201536500000
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGA....................................................................................................................................................................................201562.0056215562767716041729000000
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGAA.........................................................................................................................................................................................................................221527.00527502400776123612415300000
.........................................................................................................................................................................................................AGATCATTTTGAAAGCTGATT..................................................................................................................................................................................211515.005155612822943412814520401000
....................................................................................................................................................................GTTTTCGATTTGGTTTGACT........................................................................................................................................................................................................................201493.0049322127182311100155100000
.....................................................................................................................................................................TTTTCGATTTGGTTTGACT........................................................................................................................................................................................................................191396.0039615639182000002017000000
......................................................................................................................................................................................................GTGAGATCATTTTGAAAGCTGATT..................................................................................................................................................................................241395.00395591716710911362817500000
..........................................................................................................................................................................................................GATCATTTTGAAAGCT......................................................................................................................................................................................161377.003770000000000377000000
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTG.................................................................................................................................................................................241362.00362642764850078392528168000
..................................................................................................................................................................CGGTTTTCGATTTGGTTTGACG........................................................................................................................................................................................................................221360.00360431330400000000000000
.........................................................................................................................................................................................................AGATCATTTTGAAAGCTGAT...................................................................................................................................................................................201274.002741181849651021128900000
............................................................................................................................................................................................................TCATTTTGAAAGCTGAT...................................................................................................................................................................................171264.002640000000215256000000
.............................................................................................................................................................................................................CATTTTGAAAGCTGAT...................................................................................................................................................................................161257.002570000001025249000000
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGATTT.................................................................................................................................................................................231244.0024401022421400003000000
......................................................................................................................................................................................................GTGAGATCATTTTGAAAGCTGA....................................................................................................................................................................................221217.0021796148530076131100000
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCC......................................................................................................................................................................................191203.00203321250000000154000000
.......................................................................................................................................................................................................TGAGATCATTTTGAAA.........................................................................................................................................................................................161195.001950000009211219134000000
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGT....................................................................................................................................................................................211179.001798733101700437412101000
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTAAA..............................................................................................................................................................................271179.0017900310081172749010000
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTT................................................................................................................................................................................251176.00176631436130000521744000
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGC....................................................................................................................................................................................211172.00172109291400013348100000
........................................................................................................................................................................................................GAGATCATTTTGAAAGCT......................................................................................................................................................................................181144.0014450032265001048000000
.......................................................................................................................................................................................................TGAGATCATTTTGAA..........................................................................................................................................................................................151137.00137000000146441441000000
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTG.....................................................................................................................................................................................191133.001331320331750000117000000
...........................................................................................................................................................................................................ATCATTTTGAAAGCT......................................................................................................................................................................................153125.333760000000000376000000
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAAAA.................................................................................................................................................................................241125.00125651412009323404045000
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCG......................................................................................................................................................................................191116.001164400000000108000000
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTA.....................................................................................................................................................................................201113.00113910220089202330000000
.................................................................................................................................................................CCGGTTTTCGATTTGGT..............................................................................................................................................................................................................................171110.001100000001000109000000
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGATA..................................................................................................................................................................................22193.0093100780002750000000
dm3
TC---------------------GAAAG---------------AGGAAAAACGGAAAAC-GAACGAAAAGCGTTTGTAA-----------------------------------------------CTCC-------------AATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCGATGGTCG------------------------------ATTTTTG-----------------TTG-TT---------------TGGTGTGC-------------------SizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATT..................................................................................................................................................................................23177075950.007707595010111609649537617837763178910825798400203841193314037241192156738962691943136529379385131842158491998526233413081877324543122965435365004219981266640223457703636285479103700101504421322239166749730108051042033630000000000000000023321241331830319141253147039723851252124821023117452482071268879138578226017812545450193632193953414103469923381373152586032825994398568803850385024462451096736521383748295040293814126237941410591344098744151381511846670527235511134408283077718495383399267471150782124437149324970201592145563472235103896519715871148108346321565848698641555083754221674171076923590445510040306183743050543376148431356218256847112110991824805661665186136096127834269856676277899811139362878731225087510493738180681303014559864641757528243816645441251026229221632161526629113921284656137497732129410319315407224441311439942915169355630610215895015497364990033061774842424029183252171130020897011458534009401375206834786712261960193181444567952757250007132533471276153404305987514231837052772195530076335268680620253530626229744926695241820112958651886142686510189427219870497357626825669315697383157331767673226923162760615559711604141372746828893849812323111105655614742917130412855315271818483910137572263671534434544551343274885121177418307385664075340551138017305005408675526233528902347024079103878006481721871247732738151780266468738118381710296571877006127852211221176609219539440651725661819796939739525380628288123951669408235115819637559281911134
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAT...................................................................................................................................................................................22157077407.005707740700004127423203492510250623434050594232759826103134756441288209563721031411146504788915181156511716516870119395840142473141712769717411314178339836283993188338820141558917271437155131771688994281900000000000000000476847293842388179458794042682046819249681632432201712539860299945601203761327115500486711314634367751921129982041599634756532892107693464595533363371159062852882187354629785106379102756840728263414315443650629862458012791825411358713485040865287387517833953370683588317299202389601281223041609097412302936100112538512448711751138860102794724894212563402109981066144831372246440763521514328475220110912755222374152141927232391186126371831711378713954951635366212673330161273174122918311752299505593625222734228132523591734676712216480245509295065506010678352494434883216211296719338021522822445749280030752218133124831647494675089281062346516318573277148521346028674151814860793732921051600121561475979853265380305180663158359981213852324621513103614934953738133699161260289573252162828153536426847840812711925764772066503473886475703478508812924630633908061535364527041240667969885060923894993625086086621469822380577090218771144775912328826356823011253001183620242236335342253628626127724054925130918855358991173430307190105456184113835561237219206471411697331499684758012672157473804452492863845370354368653782773443453213657818062298940323920782053
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGA....................................................................................................................................................................................2111906065.001906065000024102367651598192734024821739715902463175539557172417121362152162894542332251036898591962872653693227941202111941120110902941061136647400000000000000000983968769665508461726578216898942241329613644073425101025011752836163827703078142727655738324425345220171009207141330221722289842821044828521461798445392417950202123411988196721065150416242095141347988148051280603504093616418332160513364151672679211632285234150207793149419645818641114338316581108525567921809723562174348010781103135385014701024418821298162153927580138132217124513017129154240291482338721722224548850325982108107232544040791357110143945323010087865360011768074566103419511615316971057286813972137151751115162523574111207894359851255461557012569201839081274435446845711995399544225592468166743052835992296364573591732982392330272281952369136891518188603751289298782964411378330259804427307818343668353091289532337032763317808174687477268948310813707084532527910238631573212115035311622181640754251911313322689331341968528486261986127712169942394812484289843490831
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..................................................................................................................................................................CGGTTTTCGATTTGGTTTGAC.........................................................................................................................................................................................................................2117825.00782500001000001002000000001309130100000000210013001001001214700010000000000000000076280000313232010012110003004837350230110720020000020000000000000011445007170012440000040321362793110410218014810312112212851112150000000000801200000052331416152260725395954254310152585816190000103501359121250254819533778141016101786185031640511150532341813222189110131652724491627501027217471538555910711301301515452462454159034945431119103021421189656205
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAAA..................................................................................................................................................................................2317093.007093000011110200150003005218000200000000531403011510404531020000000000000000000000047430524344150010000021001841370111000006011000000031100011230200551361213201146828141131000005223722112554030016031406203425061910100004112000000125100100025245512656545748832533519239005721004171013011149456303014970051132772011315744131116071105841115926126161316523156893079235862260173151935681258113191241226927916392511101208015294012476232418460
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTG...........................................................................................................................................................................................................................2016860.0068600000300000000713420010070461343711720591120025101311251404003772000000000000000000312541103103337103201439102517265606946129000019102300101011132000100000001240314232438630000010915401821124312970261778746115571191213651922632518611111003000020000100000036301917112476451276101481492099700002916147887671862381263814049135262127771324343362345353322361951501663532311941710253331062199182610841082270117911882012222539211480468727351612128401090
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATAA.................................................................................................................................................................................2416842.00684200000002000101000000458000600000002641832229703625111043200000000000000000000000327421517144301830000021690001013039481540060811051000100020330000052160777702563413451835125710210057532222466380400470401208002222305982184300002118110000003495023000261610911708335535099174633722170034912004201051154011265111612019821561641717452543676322603116438261276019221811227410928981068469055969216118453301682721710193420819484811991772330930320920420
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAA................................................................................................................................................................................2516249.00624900001076100001000000171020000000000074551123219114512417271274400000000000000000000000105220100161651082400000002921002602717321027440210237011000002020110000126120061041181528393875315625161712000005588436470900000109090012210021234112220022128000007516000210011115319401263386751651108872832004330003101132030080190010131711003412135350138594264526764412221602515206230448813314257214548111214332679155189439750716791312423161922212150
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGC....................................................................................................................................................................................2115321.005321000000001000010000000100007100000001014201132000013251714200000000000000000000000000100001002100000020000010011410010000014771002011403043343008510011022009417224022700000293833216862126370170003020207001028281302130001000000000100000011750512033021413371300100000438529256111118483822761742501433246142031911242544364406218181357185410012456543515626116822817121339381417253351351558341694714725414501616101436171618383689515423034290
..........................................................................................................................................................................................................GATCATTTTGAAAGCTGATT..................................................................................................................................................................................2015164.0051640000000000000100000041101004701000000301100211100131125310000000000000000000000523700001001010010000001200004272500000301000000000000030000000141604763262913918353362281202498151094831041051108100100216960410632000101013414811421000000187123962412788632731167271640014880100970106002101031700230171633461271393351813996871661375759187914321101321672503233421166739610770114131558871422021106320415
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGT....................................................................................................................................................................................2115079.0050790000000000000100020000080480000000000112011420120101310000000000000000000000000120300000561001100101000024481164100000101020100000135141000030000202560162105121711210000010357401117526305102200470308016301053121310221000030520000014001000787078136002110331747205700005327823186131915163571118418394144934845695082649466784163970321954016333126703547882412434577109346871551315215135290130262266837334443713514996408391481428125736871100
.........................................................................................................................................................................................................AGATCATTTTGAAAGCTGATT..................................................................................................................................................................................2114855.004855000000000000000000001300002301000000000100100000043131000010000000000000000007438000000600010000002307201218741200031301000002100001000010244024203410812614420006711234136128281075212160190010361391601452439381172301313000304710001160021001678866118042812556626101560392014110000431651123838522912617401217222201669671282316454402667391819849322356932886810924138439051611011238259311139401952817231423053352145759220190
............................................................................................................................................................................................................TCATTTTGAAAGCTGATT..................................................................................................................................................................................1814327.004327000000000000000002101521010080000000020200011101224111200000000000000000000000108371006001540020001012205013614301904120040020000100070430000000000985007311215151942110912112034550157879851307001192130002002648224313542320001407100000690020002261391552732425900100000800200000202050051031161117621034211455317520542868939403711023941962229322147534806155188348912291431021951926578595562311413251514102224550138661191
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGACTT.......................................................................................................................................................................................................................2413683.003683000001000000011558001000001000000000000001110000000000000000000000000000000002360000004900220001110000021061649000030040000000000100000000000000001202001000000006767101611102008126149112174247871311220000000000000003100000031109450550410610122399236159500032140220111164213016210262566585245613003110401101377301233291448436101021120202149321990516351413454426359522722107720336206212735143178010760
....................................................................................................................................................................GTTTTCGATTTGGTTTGACT........................................................................................................................................................................................................................2013676.003676000000000000000000001010094110000000010000000000011002700000000000000000000000001000000000000000000000000000000000000100000000200000200000000110005111000003114143014411441701002120102110026264521003002000010574465405484363210000001088423341435408116395310600003401010020021304100742120500436211149264324518543109143251012882833620251667961541122095341429046212120311730
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTT................................................................................................................................................................................2513530.00353000001000000000000000242000100000001120422590113131502000107691900000000000000000321816150002001072010011220005224836412133520000811400000010805300002010100280021441233168140000003723101250112301300926034025031005810101716611200070100000002011000000433617345323281261212297001932005047133967948504241090934734434564241421425964124540637676127519035735331925240431451334017133141117567971982729521412198115491597810488231171130
.........................................................................................................................................................................................................AGATCATTTTGAAAGCTGAT...................................................................................................................................................................................2013452.0034520000000000000000000000000017110000000000010010100100105660010000000000000000004003000000100000000021002002090000020010010000020000000010001400215015530915400210016582144382201864504010811112010042461803312000001000000003000000084603412122258433390090000234213651421341503669425391611032533241111611713209114215103931734111510342912922300100340170200332495402277397343532410513316121510832160590
droEre2
TC---------------------GAAAG---------------AGGAAAAACGGATAGC-GGACGAAAAGCGTTTGTAA-----------------------------------------------CTCC-------------AATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCGATGGTCG------------------------------ATTTTTG-----------------TTG-CT---------------TGCTGTGC-------------------SizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATT..................................................................................................................................................................................2312184195.0021841955587653269274390030376746087377810100330
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAT...................................................................................................................................................................................2211247814.001247814134725450402633339528516287485129772
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTT.................................................................................................................................................................................24195954.0095954219343905227460017455470722714
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGA....................................................................................................................................................................................21153527.005352714365210920792022054414112116
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGATT..................................................................................................................................................................................22129569.0029569288973891574412790
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGACT........................................................................................................................................................................................................................23122023.002202347816153421723420631332606
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATC..................................................................................................................................................................................23114892.001489230995874453503430294
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTG.....................................................................................................................................................................................2018182.008182208322289403583206699
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATA..................................................................................................................................................................................2317730.0077302039316873915953450204
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGAT...................................................................................................................................................................................2117102.00710268972568321277
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTA.................................................................................................................................................................................2415918.0059181915257101371948818842
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCT......................................................................................................................................................................................1914239.004239357891321692026144719
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATG..................................................................................................................................................................................2312606.0026061583068225320563
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAC...................................................................................................................................................................................2212456.00245674165323402224440
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGAC.........................................................................................................................................................................................................................2212360.002360708447633754450358
..................................................................................................................................................................CGGTTTTCGATTTGGTTTGACT........................................................................................................................................................................................................................2212047.00204763054940119184405120
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGATTT.................................................................................................................................................................................2311119.0011191099701066
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGACC........................................................................................................................................................................................................................2311073.00107351021020423
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAA...................................................................................................................................................................................221966.00966426667133251281
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGA..........................................................................................................................................................................................................................211929.00929500304001911671
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTC.................................................................................................................................................................................241902.009024808419915312631
.........................................................................................................................................................................................................AGATCATTTTGAAAGCTGATT..................................................................................................................................................................................211746.007465931066316220
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGC.......................................................................................................................................................................................181691.00691104239367724616
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGA....................................................................................................................................................................................201660.006606431006100
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTG.................................................................................................................................................................................241544.0054431561221006445
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTT................................................................................................................................................................................251419.0041916311701081300
......................................................................................................................................................................................................GTGAGATCATTTTGAAAGCTGATT..................................................................................................................................................................................241352.00352297151217128
......................................................................................................................................................................................................GTGAGATCATTTTGAAAGCTGAT...................................................................................................................................................................................231328.0032810518224119546
.......................................................................................................................................................................................................TGAGATCATTTTGAAA.........................................................................................................................................................................................161323.00323000000323
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAAA..................................................................................................................................................................................231266.00266164103062225
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTG...........................................................................................................................................................................................................................201239.00239122015243570
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATAA.................................................................................................................................................................................241213.002131381010301618
.........................................................................................................................................................................................................AGATCATTTTGAAAGCTGAT...................................................................................................................................................................................201202.0020213951822270
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGACTT.......................................................................................................................................................................................................................241174.0017474520302241
..........................................................................................................................................................................................................GATCATTTTGAAAGCTGATT..................................................................................................................................................................................201171.00171114181481214
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAG...................................................................................................................................................................................221154.00154285124017520
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAAA...............................................................................................................................................................................261150.001501226007213
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGT....................................................................................................................................................................................211147.001474906068240
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTTT...............................................................................................................................................................................261140.001405205044354
..................................................................................................................................................................CGGTTTTCGATTTGGTTTGACC........................................................................................................................................................................................................................221119.00119111601010
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGG....................................................................................................................................................................................211118.001188065013140
..................................................................................................................................................................CGGTTTTCGATTTGGTTTGAC.........................................................................................................................................................................................................................211109.00109642419290
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGATA..................................................................................................................................................................................221106.00106101000005
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGATTA.................................................................................................................................................................................231103.00103103000000
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAA................................................................................................................................................................................251102.00102733002024
...........................................................................................................................................................................................................ATCATTTTGAAAGCTGATT..................................................................................................................................................................................19292.50185501826444223
.............................................................................................................................................................................................................CATTTTGAAAGCTGATT..................................................................................................................................................................................17287.50175000000175
...........................................................................................................................................................................................................ATCATTTTGAAAGCTGAT...................................................................................................................................................................................18281.00162820395540
.................................................................................................................................................................CCGGTTTTCGATTTGGTTT............................................................................................................................................................................................................................19174.00743302315210
..........................................................................................................................................................................................................GATCATTTTGAAAGCTGAT...................................................................................................................................................................................19166.00661890811200
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTG.....................................................................................................................................................................................19165.006565000000
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGACA........................................................................................................................................................................................................................23161.00611300116301
......................................................................................................................................................................................................GTGAGATCATTTTGAAAGCTGA....................................................................................................................................................................................22160.00601110113160
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATAAA................................................................................................................................................................................25159.005950211410
droYak3
TC---------------------GAAAG---------------AGGAAAAACGGAAAGC-GAACGAAAAGCGTTTGTAA-----------------------------------------------CTCC-------------AATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCGATGGTCG------------------------------ATTTT-GTTGTTGTTG----TTG-TTG-CTCGCTGTGCTATACTGTGCTGTGC-------------------SizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATT..................................................................................................................................................................................2313163085.003163085110842334241235645343805187591066021921771106189
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAT...................................................................................................................................................................................221788096.007880966768688021333419576591064558451171945035262
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGACT........................................................................................................................................................................................................................231292659.00292659103325334272676236114837714220018
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATC..................................................................................................................................................................................231125737.0012573790010512438758181521170000
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGA....................................................................................................................................................................................21165947.006594732267892613781233999470550290106
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGACC........................................................................................................................................................................................................................23163282.0063282118406209500120000
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTT.................................................................................................................................................................................24160458.00604583873123493345711617434730404900096
..................................................................................................................................................................CGGTTTTCGATTTGGTTTGACT........................................................................................................................................................................................................................22135854.00358541625735329873352358901000
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAC...................................................................................................................................................................................22124545.0024545170270225303413811150000
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGATT..................................................................................................................................................................................22121872.00218723419369241218213240000
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGAC.........................................................................................................................................................................................................................22119391.001939144425841399787349110310349
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGC.......................................................................................................................................................................................18114490.00144901132310130072104230020
..................................................................................................................................................................CGGTTTTCGATTTGGTTTGACC........................................................................................................................................................................................................................2217941.0079411892774910000000
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGG....................................................................................................................................................................................2115615.0056155552432211770000
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGAT...................................................................................................................................................................................2115539.0055393253231481519110000
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATA..................................................................................................................................................................................2314690.004690415753278098821843780000
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTG.....................................................................................................................................................................................2014305.00430510361407162161576808460010
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTA.................................................................................................................................................................................2413666.003666255105314641103318355100017
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATG..................................................................................................................................................................................2312564.00256410442230373063150000
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCT......................................................................................................................................................................................1912202.0022023039651149562908671020
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAA...................................................................................................................................................................................2211675.001675394278850115321050000
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTC.................................................................................................................................................................................2411423.0014235921810549549290000
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGA..........................................................................................................................................................................................................................2111350.00135072574461174999750030
..................................................................................................................................................................CGGTTTTCGATTTGGTTTGAC.........................................................................................................................................................................................................................2111298.001298124521099210200000
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGATTT.................................................................................................................................................................................231796.0079607534200010000
.........................................................................................................................................................................................................AGATCATTTTGAAAGCTGATT..................................................................................................................................................................................211638.006382146813901270000
......................................................................................................................................................................................................GTGAGATCATTTTGAAAGCTGAT...................................................................................................................................................................................231586.0058651563745416440000
......................................................................................................................................................................................................GTGAGATCATTTTGAAAGCTGATT..................................................................................................................................................................................241580.0058023198337100390000
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAG...................................................................................................................................................................................221548.00548200220204825260000
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGA....................................................................................................................................................................................201508.005083498401110000
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGACG........................................................................................................................................................................................................................231483.00483198028302000000
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGACTT.......................................................................................................................................................................................................................241409.004097362242410270000
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTG.................................................................................................................................................................................241371.0037157182572530380000
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAAA..................................................................................................................................................................................231356.0035622332723112130000
..........................................................................................................................................................................................................GATCATTTTGAAAGCTGATT..................................................................................................................................................................................201308.00308110918400670001
...................................................................................................................................................................GGTTTTCGATTTGGTTTGACT........................................................................................................................................................................................................................211304.00304635018510140000
...........................................................................................................................................................................................................ATCATTTTGAAAGCTGATT..................................................................................................................................................................................191239.00239159112911020000
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAAA...............................................................................................................................................................................261229.0022973618020030001
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTT................................................................................................................................................................................251205.00205485630634130000
droEug1
TC---------------------GAGAGACGAAAAA-------CGGAAAAGCAGAAAGC-GAATGAAAAACGCTTGTAA-----------------------------------------------CTTC-------------AATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATG-CCACA--------------------------------------TTCCACATTCCAATGCTCG------------------------------ATTTTTG----------TTGTTTGGTG-TT---------------TGGTGTGC-------------------SizeHit CountTotal NormTotal
No Reads
droBia1
TCGCGATCC---------------ACGG---------------AGGAAAAGCGGAAAAC-GCACGAAGATCGTTCGTAA-----------------------------------------------CTTC-------------AATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCGATGGTCG------------------------------ACT-TTG-----------------TTG-CT---------------TGGCGTGC-------------------SizeHit CountTotal NormTotal
No Reads
droTak1
TC---------------------AAAAAACAAAAAAAATACAGAGGAAAAACGGAAAAC-GAACGAAAAACGTTTGTAA-----------------------------------------------CTTC-------------AATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCGATGGTCG------------------------------ATTTTTG-----------------TTG-TT---------------TGGTGTGC-------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TC---------------------AAAAG---------------AGGAAAAACGGAAAAC-GAACGAAAAACGTTTGTTA-----------------------------------------------CTTC-------------AATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCAATGGTTG------------------------------ATTTTTG-----------------TTG-TT---------------TGGTTTGC-------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TC---------------------AAAAG---------------AGGAAAAACGGAAAAC-GAACGAAAAACGTTTGTAA-----------------------------------------------CTTC-------------AATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCAATGGTTG------------------------------ATTTTTG-----------------TTG-TT---------------TGGTTTGC-------------------SizeHit CountTotal NormTotal
No Reads
droFic1
TC---------------------A---GAGGAAAAG-------AGGAAAAACGGAAAAC-GAACGAAAAACGTTTGTAA-----------------------------------------------CTTC-------------AATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCAATGGCTG------------------------------ATTTTTG-----------------TTG-TT---------------TGGTGTGC-------------------SizeHit CountTotal NormTotal
No Reads
droKik1
CT---------------------GTGAGGGGGAAAA-------CGGAAAAGGGAAAAAC-GAACGAAAAACGTTTGTAA-----------------------------------------------CTCC--------------ATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTAATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCGATGTATTTTTTTC---TC-------------------------TTCGTTTTTTGTGTGTTGTTG-TT---------------TGGTGTGC-------------------SizeHit CountTotal NormTotal
No Reads
droAna3
CG---------------------GAA-----------------AGGAAAAACGGAAAAC-GAACGAAAAACGTTTGTAA--A--------------------------------------------CTCC-------------AATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTTATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCGATGTATTTTTTTTT-TTCT------------------A-------CGTTTTTG--------GTT-TT---------------TTGTGTGC-------------------SizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATT..................................................................................................................................................................................2311134752.001134752642253967381245797698279065284569
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAT...................................................................................................................................................................................221931328.0093132820855801382568644718224093535838
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTT.................................................................................................................................................................................24196772.00967724598107357095964883765929
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGA....................................................................................................................................................................................21136469.0036469463565422634290135977142
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATC..................................................................................................................................................................................23120243.0020243271948926183215303
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATA..................................................................................................................................................................................2318834.0088342457597300124327241
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTG.....................................................................................................................................................................................2017323.00732311719141106633831571
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGACT........................................................................................................................................................................................................................2317095.007095146924561251409701935
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTA.................................................................................................................................................................................2415961.0059612584318322145543375
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAC...................................................................................................................................................................................2215958.0059582152851990138405
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGATT..................................................................................................................................................................................2214110.00411034635189193566
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCT......................................................................................................................................................................................1913884.00388414941015740211811585
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGA..........................................................................................................................................................................................................................2112555.002555177112421126252261
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAA...................................................................................................................................................................................2211546.00154610510992046169107
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGAT...................................................................................................................................................................................2111476.0014761255835616111
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAAA...............................................................................................................................................................................2611271.00127126120433143
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGC.......................................................................................................................................................................................1811168.001168369681470476
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGAC.........................................................................................................................................................................................................................2211157.00115733232697296322
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAAA..................................................................................................................................................................................2311063.0010632510178193
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATG..................................................................................................................................................................................231914.0091412477166541303
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTG...........................................................................................................................................................................................................................201879.0087971381348538
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATAAA................................................................................................................................................................................251789.007891375519011
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATAA.................................................................................................................................................................................241761.007612870422331
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGACC........................................................................................................................................................................................................................231714.0071417080014
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTC.................................................................................................................................................................................241619.006197029263987125
..................................................................................................................................................................CGGTTTTCGATTTGGTTTGACT........................................................................................................................................................................................................................221532.00532197107121051155
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTT................................................................................................................................................................................251495.00495712727880237
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAA................................................................................................................................................................................251422.004221139511131
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGT....................................................................................................................................................................................211367.0036734704921463
.........................................................................................................................................................................................................AGATCATTTTGAAAGCTGATT..................................................................................................................................................................................211286.002868217637612
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGATTT.................................................................................................................................................................................231280.00280266110003
.................................................................................................................................................................CCGGTTTTCGATTTGGTTT............................................................................................................................................................................................................................191264.0026412430208928
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGA....................................................................................................................................................................................201253.0025323851342
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTG.................................................................................................................................................................................241231.0023148425287137
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTTT...............................................................................................................................................................................261192.001923940364766
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAG...................................................................................................................................................................................221189.0018949320681732
..................................................................................................................................................................CGGTTTTCGATTTGGTTTGA..........................................................................................................................................................................................................................201186.0018618300021
...........................................................................................................................................................................................................ATCATTTTGAAAGCTGAT...................................................................................................................................................................................181185.0018512143810246
......................................................................................................................................................................................................GTGAGATCATTTTGAAAGCTGAT...................................................................................................................................................................................231182.00182693749108
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGC....................................................................................................................................................................................211127.00127110258317
.................................................................................................................................................................CCGGTTTTCGATTTGGTT.............................................................................................................................................................................................................................181122.00122416040134
..........................................................................................................................................................................................................GATCATTTTGAAAGCTGATT..................................................................................................................................................................................201121.0012141563399
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCC......................................................................................................................................................................................191120.0012011170101
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTT.....................................................................................................................................................................................201100.0010081075331
............................................................................................................................................................................................................TCATTTTGAAAGCTGATT..................................................................................................................................................................................18189.008913581287
...........................................................................................................................................................................................................ATCATTTTGAAAGCTGATT..................................................................................................................................................................................19188.00881347241111
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGG....................................................................................................................................................................................21180.0080412010459
.........................................................................................................................................................................................................AGATCATTTTGAAAGCTGAT...................................................................................................................................................................................20177.0077231521927
droBip1
AC---------------------GGAA----------------AGGAAAAACGGAAAAATGAACGAAAAACGTTTGTAA-----------------------------------------------CTCC-------------AATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-T-TATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCGATGTATTTTTTTTTATTTTACTTTTTTTGGGGTTTTGGTTTTTG-----------------TTGCTT---------------TTGTATGC-------------------SizeHit CountTotal NormTotal
No Reads
dp5
TG---------------------G-------------------GGGAAAAACGGAAAAC-GAACGAAAAATGTTTGGGACTA--------------------------------------------CTCCAC----CAATA--TATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTTATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCAATGGTTG------------------------------TTTTT-TTCGTTTTTT----TTTTTTT-TT---------------TTGTGTGC-------------------SizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATT..................................................................................................................................................................................2311498015.00149801542755018925158431791664792193532141402408245595343
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAT...................................................................................................................................................................................221685144.00685144265722342795153409997854460474178507161421141655
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTT.................................................................................................................................................................................24173354.00733542093369110142163921877489858697318617
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGA....................................................................................................................................................................................21172087.00720871738418104907464070357286864101529641718
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATC..................................................................................................................................................................................23146802.0046802123094005361415213795012
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGATT..................................................................................................................................................................................22129065.00290652279705714271831211249
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGACT........................................................................................................................................................................................................................23127107.00271071624485187786231762358871211136
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTG.....................................................................................................................................................................................20113513.00135138010484441387210631504169913
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGAT...................................................................................................................................................................................21113505.0013505813333544625721344
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAC...................................................................................................................................................................................22113116.001311691701070519835660133000
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATA..................................................................................................................................................................................2318293.00829314595213641961451512811303525
..................................................................................................................................................................CGGTTTTCGATTTGGTTTGACT........................................................................................................................................................................................................................2215068.0050686413642734106456832293326
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGACC........................................................................................................................................................................................................................2313957.003957633774170022000
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTA.................................................................................................................................................................................2413570.0035707201360315814815735398267
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGAC.........................................................................................................................................................................................................................2213026.003026141112413551764752117860
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCT......................................................................................................................................................................................1912193.0021931130111645113308289596
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGA....................................................................................................................................................................................2012174.0021740214943042192
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGATTT.................................................................................................................................................................................2312070.002070020091543001020
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGC.......................................................................................................................................................................................1812032.002032694194865224111511486
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAA...................................................................................................................................................................................2211644.0016442194129618714309826247
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTC.................................................................................................................................................................................2411390.001390438051637696429381
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGA..........................................................................................................................................................................................................................2111211.001211210423818104146392
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATG..................................................................................................................................................................................2311015.0010154124620208143013002
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAAA..................................................................................................................................................................................231778.0077845991161323102470
.........................................................................................................................................................................................................AGATCATTTTGAAAGCTGATT..................................................................................................................................................................................211757.0075716503759172000
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTG...........................................................................................................................................................................................................................201649.0064946032011815150
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATAA.................................................................................................................................................................................241629.0062915306144181910
..................................................................................................................................................................CGGTTTTCGATTTGGTTTGACC........................................................................................................................................................................................................................221601.006012156433100000
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATAAA................................................................................................................................................................................251466.0046623885803051000
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTG.....................................................................................................................................................................................191449.00449044900000000
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAAA...............................................................................................................................................................................261416.0041613226122062200
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGT....................................................................................................................................................................................211378.00378226922113349010
..................................................................................................................................................................CGGTTTTCGATTTGGTTTGAC.........................................................................................................................................................................................................................211367.003674155168131822041
......................................................................................................................................................................................................GTGAGATCATTTTGAAAGCTGATT..................................................................................................................................................................................241349.003490305314332010
.........................................................................................................................................................................................................AGATCATTTTGAAAGCTGAT...................................................................................................................................................................................201326.00326030344447000
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTT................................................................................................................................................................................251326.0032602102214029335130
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGATA..................................................................................................................................................................................221308.00308030431000000
......................................................................................................................................................................................................GTGAGATCATTTTGAAAGCTGAT...................................................................................................................................................................................231268.00268014245456417000
..........................................................................................................................................................................................................GATCATTTTGAAAGCTGATT..................................................................................................................................................................................201234.0023401853112123000
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTG.................................................................................................................................................................................241223.0022301781217664000
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAA................................................................................................................................................................................251204.0020401501620013221
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAG...................................................................................................................................................................................221196.001963219199558000
...........................................................................................................................................................................................................ATCATTTTGAAAGCTGATT..................................................................................................................................................................................191179.0017931242017671010
...................................................................................................................................................................GGTTTTCGATTTGGTTTGACT........................................................................................................................................................................................................................211168.001682144120125002
...........................................................................................................................................................................................................ATCATTTTGAAAGCTGAT...................................................................................................................................................................................181131.00131184544330000
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTTT...............................................................................................................................................................................261129.00129096240715050
......................................................................................................................................................................................................GTGAGATCATTTTGAAAGCTGA....................................................................................................................................................................................221127.001271523078313328
............................................................................................................................................................................................................TCATTTTGAAAGCTGATT..................................................................................................................................................................................181125.001252951412200000
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGG....................................................................................................................................................................................211123.0012348351312285000
..........................................................................................................................................................................................................GATCATTTTGAAAGCTGAT...................................................................................................................................................................................191113.0011319675102010
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGATTA.................................................................................................................................................................................231108.00108010701000000
..................................................................................................................................................................CGGTTTTCGATTTGGTTTGA..........................................................................................................................................................................................................................20191.009108511310000
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGATC..................................................................................................................................................................................22177.00770164417000000
........................................................................................................................................................................................................GAGATCATTTTGAAAGCT......................................................................................................................................................................................18162.006206200000000
droPer2
TG---------------------G-------------------GGGAAAAACGGAAAAC-GAACGAAAAATGTTTGGGACTA--------------------------------------------CTCCAC----CAATA--TATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTTATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCCATGGTTG------------------------------TTTTT-TTCGTTTTTT--------TTT-TT---------------TTGTGTGC-------------------SizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATT..................................................................................................................................................................................231546521.00546521692161191531104255954126810164346
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAT...................................................................................................................................................................................221405555.004055553078240024218773810675601199165
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGA....................................................................................................................................................................................21139377.0039377117266782192432887027647
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTT.................................................................................................................................................................................24115905.00159056323831467261038354530
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGACT........................................................................................................................................................................................................................23113174.001317411000426309296430713
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGATT..................................................................................................................................................................................2216856.0068563667233274126
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTG.....................................................................................................................................................................................2015363.00536351712194267113741540
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGC.......................................................................................................................................................................................1814978.004978482485810492
..................................................................................................................................................................CGGTTTTCGATTTGGTTTGACT........................................................................................................................................................................................................................2214571.00457139071309194107242
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATA..................................................................................................................................................................................2313225.00322544922147085214193
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGAT...................................................................................................................................................................................2112423.00242327233310121031
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGG....................................................................................................................................................................................2112059.0020592031103186
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCT......................................................................................................................................................................................1912031.002031137187187232598690
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTA.................................................................................................................................................................................2411575.00157521477854111221197
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGAC.........................................................................................................................................................................................................................2211407.001407105211913558385
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATC..................................................................................................................................................................................231805.00805256301577284143
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAC...................................................................................................................................................................................221679.0067936526144613692
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAA...................................................................................................................................................................................221587.0058714124711327185
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGACC........................................................................................................................................................................................................................231528.0052852800000
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGA....................................................................................................................................................................................201365.00365034801610
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATAA.................................................................................................................................................................................241319.00319632377183
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAG...................................................................................................................................................................................221315.0031599107815797
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTC.................................................................................................................................................................................241303.0030337933508139
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGA..........................................................................................................................................................................................................................211286.0028661493365339
..................................................................................................................................................................CGGTTTTCGATTTGGTTTGAC.........................................................................................................................................................................................................................211248.00248228104123
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGACG........................................................................................................................................................................................................................231227.0022722700000
..................................................................................................................................................................CGGTTTTCGATTTGGTTTGACC........................................................................................................................................................................................................................221221.0022122100000
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGATTT.................................................................................................................................................................................231215.0021502140010
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAAA..................................................................................................................................................................................231213.00213401560197
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATG..................................................................................................................................................................................231208.002087236315775
......................................................................................................................................................................................................GTGAGATCATTTTGAAAGCTGAT...................................................................................................................................................................................231206.002064419827126
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAAA...............................................................................................................................................................................261182.00182361431020
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGT....................................................................................................................................................................................211159.001595220158730
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATAAA................................................................................................................................................................................251158.00158291271010
.........................................................................................................................................................................................................AGATCATTTTGAAAGCTGATT..................................................................................................................................................................................211142.00142111202171
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGATA..................................................................................................................................................................................221137.0013701361000
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAA................................................................................................................................................................................251126.0012622980033
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTG.................................................................................................................................................................................241109.00109186804127
......................................................................................................................................................................................................GTGAGATCATTTTGAAAGCTGA....................................................................................................................................................................................221101.0010167920518
......................................................................................................................................................................TTTCGATTTGGTTTGACT........................................................................................................................................................................................................................18199.00999810000
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTT................................................................................................................................................................................25193.00930261123420
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTG...........................................................................................................................................................................................................................20190.009045607149
......................................................................................................................................................................................................GTGAGATCATTTTGAAAGCTGATT..................................................................................................................................................................................24177.00779611015
...........................................................................................................................................................................................................ATCATTTTGAAAGCTGAT...................................................................................................................................................................................18171.007112402845
..................................................................................................................................................................CGGTTTTCGATTTGGTTTGACG........................................................................................................................................................................................................................22169.00696810000
...................................................................................................................................................................GGTTTTCGATTTGGTTTGACT........................................................................................................................................................................................................................21168.006854130001
..........................................................................................................................................................................................................GATCATTTTGAAAGCTGATT..................................................................................................................................................................................20167.006784123310
.........................................................................................................................................................................................................AGATCATTTTGAAAGCTGAT...................................................................................................................................................................................20167.006715462211
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGC....................................................................................................................................................................................21165.00658118461
....................................................................................................................................................................GTTTTCGATTTGGTTTGACT........................................................................................................................................................................................................................20163.00635830002
...........................................................................................................................................................................................................ATCATTTTGAAAGCTGATT..................................................................................................................................................................................19157.005727141267
..........................................................................................................................................................................................................GATCATTTTGAAAGCTGAT...................................................................................................................................................................................19152.005228116124
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTG.....................................................................................................................................................................................19150.00500500000
............................................................................................................................................................................................................TCATTTTGAAAGCTGATT..................................................................................................................................................................................18143.004322131133
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGATTA.................................................................................................................................................................................23138.00380380000
.....................................................................................................................................................................TTTTCGATTTGGTTTGACT........................................................................................................................................................................................................................19136.00363600000
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTTT...............................................................................................................................................................................26132.00321902713
droWil2
TC---------------------A------------------------------------------------------T--------------CTTCGTCTACCCTGA-----TGATTTGTTTTTTTTTCATACATT-TTTTTGATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACAGAAAAAAAAAGAAGAAAAAAAAATAACGATCATCATCTTGCCACATTCCGATGG--------------------------------------------------------------------------------CTCTGG-------------------SizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAT...................................................................................................................................................................................2211510720.00151072012309248839156698499883682208
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATT..................................................................................................................................................................................2311158616.001158616186573118121122846542036189040
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGA....................................................................................................................................................................................21195298.0095298722397493438459135269
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTT.................................................................................................................................................................................24140660.00406605818431223371014218051
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGACT........................................................................................................................................................................................................................23130298.0030298159421217432114171290
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGC.......................................................................................................................................................................................18126763.00267632649589413738
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGG....................................................................................................................................................................................2119895.00989598734846
..................................................................................................................................................................CGGTTTTCGATTTGGTTTGACT........................................................................................................................................................................................................................2218520.00852051682751122599366
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGATT..................................................................................................................................................................................2217052.0070524667932012073
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTG.....................................................................................................................................................................................2016813.00681329721647800497897
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATA..................................................................................................................................................................................2313833.0038335647392062137187
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGAC.........................................................................................................................................................................................................................2213654.00365430151361539593
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAC...................................................................................................................................................................................2213293.003293190625156403803
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTA.................................................................................................................................................................................2413285.0032853335802611877234
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGAT...................................................................................................................................................................................2113221.0032214828921764200
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATC..................................................................................................................................................................................2312876.002876893251209552971
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCT......................................................................................................................................................................................1912300.00230052268491491998
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAA...................................................................................................................................................................................2211611.00161166519680242428
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGACC........................................................................................................................................................................................................................2311059.001059104421102
......................................................................................................................................................................................................GTGAGATCATTTTGAAAGCTGAT...................................................................................................................................................................................231907.00907964328607133
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGA....................................................................................................................................................................................201409.004098386645
..................................................................................................................................................................CGGTTTTCGATTTGGTTTGAC.........................................................................................................................................................................................................................211404.004042801828816
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTC.................................................................................................................................................................................241392.00392100133284982
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTG.................................................................................................................................................................................241378.0037822363273332
..................................................................................................................................................................CGGTTTTCGATTTGGTTTGACC........................................................................................................................................................................................................................221341.003413380021
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAAA...............................................................................................................................................................................261338.0033849502372
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAG...................................................................................................................................................................................221315.003152158113942
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGA..........................................................................................................................................................................................................................211299.0029937161146324
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATG..................................................................................................................................................................................231279.0027915838145118
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAAA..................................................................................................................................................................................231273.002734510751106
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATAA.................................................................................................................................................................................241264.00264168721581
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGATTT.................................................................................................................................................................................231258.002580255012
......................................................................................................................................................................................................GTGAGATCATTTTGAAAGCTGATT..................................................................................................................................................................................241213.0021344824803
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGACG........................................................................................................................................................................................................................231198.001981960020
.........................................................................................................................................................................................................AGATCATTTTGAAAGCTGATT..................................................................................................................................................................................211195.00195291441156
...........................................................................................................................................................................................................ATCATTTTGAAAGCTGAT...................................................................................................................................................................................181187.001871328347636
.........................................................................................................................................................................................................AGATCATTTTGAAAGCTGAT...................................................................................................................................................................................201173.00173287773130
...................................................................................................................................................................GGTTTTCGATTTGGTTTGACT........................................................................................................................................................................................................................211157.0015711828191
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATAAA................................................................................................................................................................................251140.001401530860
......................................................................................................................................................................................................GTGAGATCATTTTGAAAGCTGA....................................................................................................................................................................................221135.001357746462
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAA................................................................................................................................................................................251134.0013410432772
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTT................................................................................................................................................................................251125.00125124811846
............................................................................................................................................................................................................TCATTTTGAAAGCTGATT..................................................................................................................................................................................181117.0011758382163
...........................................................................................................................................................................................................ATCATTTTGAAAGCTGATT..................................................................................................................................................................................191111.0011119485327
..........................................................................................................................................................................................................GATCATTTTGAAAGCTGATT..................................................................................................................................................................................20187.00874613712
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTG.....................................................................................................................................................................................19183.0083874100
..........................................................................................................................................................................................................GATCATTTTGAAAGCTGAT...................................................................................................................................................................................19181.0081182361024
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGT....................................................................................................................................................................................21179.0079222014518
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGC....................................................................................................................................................................................21174.0074600239
......................................................................................................................................................................TTTCGATTTGGTTTGACT........................................................................................................................................................................................................................18167.0067594031
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTG...........................................................................................................................................................................................................................20167.00671537348
....................................................................................................................................................................GTTTTCGATTTGGTTTGACT........................................................................................................................................................................................................................20163.0063544221
..................................................................................................................................................................CGGTTTTCGATTTGGTTTGACG........................................................................................................................................................................................................................22149.0049490000
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTTT...............................................................................................................................................................................26144.00448186012
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTAT....................................................................................................................................................................................21141.004111311313
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGATA..................................................................................................................................................................................22139.0039237000
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTCC................................................................................................................................................................................25135.00359150011
.....................................................................................................................................................................TTTTCGATTTGGTTTGACT........................................................................................................................................................................................................................19135.0035302030
..................................................................................................................................................................CGGTTTTCGATTTGGTTTGA..........................................................................................................................................................................................................................20134.0034122182
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGATTA.................................................................................................................................................................................23134.0034033010
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGACA........................................................................................................................................................................................................................23132.0032652145
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTCCC...............................................................................................................................................................................26129.0029168005
.........................................................................................................................................................................................................AGATCATTTTGAAAGCTGA....................................................................................................................................................................................19128.0028721000
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGACTT.......................................................................................................................................................................................................................24127.0027166230
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATCC.................................................................................................................................................................................24126.0026491012
......................................................................................................................................................................................................GTGAGATCATTTTGAAAGCTG.....................................................................................................................................................................................21126.0026221012
.....................................................................................................................................................................................................AGTGAGATCATTTTGAAAGCTGATT..................................................................................................................................................................................25124.0024410451
........................................................................................................................................................................................................GAGATCATTTTGAAAGCT......................................................................................................................................................................................18123.0023120002
droVir3
-------------------------------------------------------------------------------------------------------------------------------------------------TGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTAT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCAATGGT------------------------------------------------------------TT---------------TTGTGTGCCCTGCACACAAGCACACGCSizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATT..................................................................................................................................................................................2314431095.00443109517206617283663514034595135385443134223105652189043870803612663957650913332665500287439925371471515063581077277115216748113460131617762686028572460619272061362498170084719814807253841139513359625986909483921051786935736177714451613313329445653549836585207410629322301137395011823480113938229185370207701318817527145381092223956423400014301815802521073721542976291826196564738105
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAT...................................................................................................................................................................................2212762232.002762232143455793215006072981149846488562088137982179917155554127900551217478294913948121850119593241824872143201468126263361772512399427557186051676027758219808290236904057181865457468033344200129623065948210719195434279217607981604138125422246147020331809152112129357175284493388192376243236330418262180519104150531068791102917036874268923498993210930347835411055313953
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGA....................................................................................................................................................................................211251049.0025104978263404017971416257928401858755136424196586359920721053252926131380108620732804133055742511338572827328211123036222189025026811219048029605815814597871091151122171743573302082862373453122649264020183721320216279379380834033081170731947712513133511504114392200857657520882478
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTT.................................................................................................................................................................................241179048.0017904869324021943417948696271016603039309847652618812466486559364615975968254331098744054673210869768672576176736983263108636755211244368783241295109423618418820011380188135148278215381376246325272312259165528551571773581602471063750421959466159434035786024560943641625
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATC..................................................................................................................................................................................23178037.0078037178614472317852660621021621989527270914134995191319371685278028001472217610311541764672742662281495630473134012234143273651692421233001522226534249816194075131891032212819118720218933724071133
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGC.......................................................................................................................................................................................18176412.00764122438899121548223822656566124010206100142235758016460755175524512427319211425740941035929473157155977312810912023420939735120229524324619815182586356930197323281335106451135569717557807266742633520126164
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGACT........................................................................................................................................................................................................................23176332.007633221506101920820791486809152063212281683271969037425546626515726515660930318719647435552649016255452231375640413493731120209579297280279546267520569406558477926124135959706263397176341513324268335191723751073128916711996169177231364306
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATA..................................................................................................................................................................................23169528.00695281184942296115246028410214795141215029827756629911139324017928021534983689257115391033702690247730122526510731669109410431448355358861483350292859185227212616548021314039211791586251572049053556389835532458254828373152242262764122762695
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCT......................................................................................................................................................................................19132327.003232774669819717743578724322319942111113147365254119453913291194358449306713375160781321594514044151373473525172625132540111020340249465179411827116211314211930263822281524281045122123
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTG.....................................................................................................................................................................................20128337.002833742020673863546501381190814655514861848929048751126664941057611381648623510848069129163943943776334295031849011012202354053474038321907259821728710197641622071551201801105416245255
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTA.................................................................................................................................................................................24128056.002805655112120738933213361922716213642182623231688129017516412818133558949239710748743592591013121136156781198184884888919220393530202517173712246412113024536020271119293124352270243177514548711175141614391963745124169
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGATT..................................................................................................................................................................................22123478.00234781016226843034810011000223951220751426385188191471834253276000000000001000000012162725621101922813121400034
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTC.................................................................................................................................................................................24120602.0020602109276143062023116355252112201059527831440192236308112429347135668781701169911093454130810128761829193204803103302106433242202820219430983644148239941046243177160562162
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAAA..................................................................................................................................................................................23117526.001752617401481908342100191332322210713133234233517012111915321265944301991314329201196620892718900236341229072106178151216115179182107355052722392504
..................................................................................................................................................................CGGTTTTCGATTTGGTTTGACT........................................................................................................................................................................................................................22115690.00156902308751203284668104266420369001694535522510171233361916653946181128016066228324474835167151130286137258284192284246202157113223179245323485110117511735416758248285514104
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATAAA................................................................................................................................................................................25114579.00145791212113815113030082815200000001318428173491116109190135148881000173832191511810223597331012110001193331632440153720714310811813912695536939513551753
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAA...................................................................................................................................................................................22113990.0013990122648450266102134131224208916383062325132925352223143631313012321714292312401417205037302118242433172916711510824259196777301716158914221356538473480410464372905179213815947
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAAA...............................................................................................................................................................................26112659.00126590013916260254019142283515101322101294333121195458101201210587104915518726544663399452282713131115975660112270005761203722971613102991712272582861132529101134
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGAT...................................................................................................................................................................................2119936.009936910963636285111715161352128211390111352140121013500000000000000000104173260000043275711255
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGG....................................................................................................................................................................................2118720.0087201646650174263100000011010010110002110002001014040001120034032522321110800033091967337449130001
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATAA.................................................................................................................................................................................2418233.008233814155763554501208252323136661066188318981309132635021462788223393337224181182727312466314210019361301845495384058121618012311715414444079100376482
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGAC.........................................................................................................................................................................................................................2218035.0080357582162722962297544151637702146381533143298363239205649948941124123216889145801000465274122891715431181251162072257873738362432991591611852351619214943
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAC...................................................................................................................................................................................2217655.00765524813865940321092871271291651512131925104118343919321065109741212774131240100000200030001019113812037508343237411185121013161078
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAA................................................................................................................................................................................2515440.00544002473324443051171717191431131439175422112941424223206164894370712357318996126433403111000000412602596815395591561791019515214650693957
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGACC........................................................................................................................................................................................................................2314334.004334173576403339394006000032111311249210012194210600004140001000000000001042142103201106773000000
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTT................................................................................................................................................................................2513481.0034810717718148339882150013101891133021251702318940916172381741541627520314671128861499021101102501011104738443317400139728600000
...........................................................................................................................................................................................................ATCATTTTGAAAGCTGAT...................................................................................................................................................................................1813127.003127225711752837806037183241151647891148173113166451014251410200224400000000000000001102135102600015221310000
......................................................................................................................................................................................................GTGAGATCATTTTGAAAGCTGAT...................................................................................................................................................................................2312959.00295917481651362264655115527762821617269366351016863807231356022006861111251710202110188561313601011413350342137182258284448613
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATG..................................................................................................................................................................................2311952.001952268510243621144947222189351651415613111836281232201012131022161719712472901201120003231100416148943013524283067626044438015441118
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTG.................................................................................................................................................................................2411823.00182324482523826405833925714432392525252029354125146055394415455030327024195443010000000010000003293486420902155382923393901112
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAAAA.................................................................................................................................................................................2411719.0017190011171000000001000000000020001100201341102333012020100000026001060377305202161113616181095056220242
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAG...................................................................................................................................................................................2211519.0015196821830631419796154321171797143118421540502443132104211000000001000010000940100417022149261121781211177113331
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGA..........................................................................................................................................................................................................................2111396.001396925468259561572630113018121612710413131512241655723083714683733101000000002110201442368611841601710067221141
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGATTT.................................................................................................................................................................................2311303.001303101246140000210000020010001000100111101100000000000000100000000001240000000020000000
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTAAA..............................................................................................................................................................................2711168.0011680014980601001630101110124364113152320211301141457177280452101000000000000020107735282615919639811311414
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGA....................................................................................................................................................................................2011082.0010821410481101000000020010000030010000002000001000000000000100000003500010001001200011
...........................................................................................................................................................................................................ATCATTTTGAAAGCTGATT..................................................................................................................................................................................1911037.001037811128183466862729499111151510191464481337839462865325114148590000000000000000100211692600038301418211900000
......................................................................................................................................................................................................GTGAGATCATTTTGAAAGCTGATT..................................................................................................................................................................................2411022.0010223928399137000000443240212112121304310110031000005534378114211230841400021388824242969801120
......................................................................................................................................................................................................GTGAGATCATTTTGAAAGCTGA....................................................................................................................................................................................221942.00942154328310230010000621132011110312203010000011111155310468864104291612031214149124589911010910027
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATCC.................................................................................................................................................................................241916.0091601351101071800400001429366226519426039246512483082000081570000000000000000000066297400021212300000
.........................................................................................................................................................................................................AGATCATTTTGAAAGCTGATT..................................................................................................................................................................................211859.0085923578131412010002111527664862344271112001001260000000000000000010214001300031115100000
............................................................................................................................................................................................................TCATTTTGAAAGCTGATT..................................................................................................................................................................................181749.0074912141221911194944500314137153955717924431535116431116150000000000000001100140195210630473449474910020
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTAA...............................................................................................................................................................................261676.0067601302150000033500303016421156031464764266853934111110000000000000000102116021545221967111300123
...................................................................................................................................................................GGTTTTCGATTTGGTTTGACT........................................................................................................................................................................................................................211668.006681972891600121530000540640003269185930702000000000002021002320245936802000059943422555300000
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTA................................................................................................................................................................................251641.00641002516240000043231251579313164188364624205244242456172310101200001010000000000132020312013141615141210000
..................................................................................................................................................................CGGTTTTCGATTTGGTTTGACC........................................................................................................................................................................................................................221625.0062518765511010000000000000100000010110100000000000000010000100000100000000040001100000
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTTT...............................................................................................................................................................................261562.00562054533135107100025211739112652836333115153512453130320023000000000000000001022810093000811829400000
..................................................................................................................................................................CGGTTTTCGATTTGGTTTGAC.........................................................................................................................................................................................................................211532.00532104095113506011100034010000110013300111101024000102112220201000845301600150442123272500000
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGACTT.......................................................................................................................................................................................................................241505.005052091198320412120000312302007001115111000100020000000020000000015176252910045352600011
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATCA.................................................................................................................................................................................241459.004590012083818008002332115320212152265254184224521235224810000000000000000010313111201000002000010
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTCC................................................................................................................................................................................251448.00448111805457001000061301453958101224263932540280000252000000000000000000000141100093619200000
..........................................................................................................................................................................................................GATCATTTTGAAAGCTGATT..................................................................................................................................................................................201430.0043031195275171112110101651016913561013847824251122711000000000000000000016350000010000000000
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGT....................................................................................................................................................................................211385.003855215931910012000091139741041100020371508010031400000000000000000020855900030014012110021
.........................................................................................................................................................................................................AGATCATTTTGAAAGCTGAT...................................................................................................................................................................................201371.0037131027211113433200203020022102000320201110002000000000000000000160400000044441400000
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGC....................................................................................................................................................................................211323.003231856413121900100005305332262120000010201100003200121000000110003105269500051116022200000
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGATC..................................................................................................................................................................................221287.002870026514000000000000100000000100140000000001000000000000000000000000000000000000000
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTCA................................................................................................................................................................................251267.0026700140310110100100141154112673285261511154114131011621000000000000000000002102300041011500000
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGACG........................................................................................................................................................................................................................231267.0026768143116000000000000000000001000000000000010000000100221100000901000001026111800000
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTG...........................................................................................................................................................................................................................201264.00264316111059210100002223302041211210124110300010300000000000000000000191300000012144300000
....................................................................................................................................................................GTTTTCGATTTGGTTTGACT........................................................................................................................................................................................................................201246.00246153117421700100102010000020002211010100100000000110000001101121650670012635116192200000
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTC................................................................................................................................................................................251212.0021200182065001000016170328481211233232263701000009000000000000000000001010000000000000000
......................................................................................................................................................................................................GTGAGATCATTTTGAAAGCTGATA..................................................................................................................................................................................241209.0020900316002000001110000000001000010010011000000001111303240000820201044425421713102050313
......................................................................................................................................................................TTTCGATTTGGTTTGACT........................................................................................................................................................................................................................181198.00198101937411802200002101103002110010310101002100101100001101110170000022021512710111410000
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGACA........................................................................................................................................................................................................................231193.001931319151030000052001100000130420103505342200000000010000000002541606895448312148475
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTTA...............................................................................................................................................................................261192.001920161124304003001134123302376912313733178234000010000000000000003306010066429600000
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTG.....................................................................................................................................................................................191185.00185111780001000000000000020000000000000000000000000000000000000000000000000200000000
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGACA..................................................................................................................................................................................231181.0018101210000000001000000001200010000202121520000100000000000010138010502524203041151278
.......................................................................................................................................................................................................TGAGATCATTTTGAAAG........................................................................................................................................................................................171170.00170000000000000000000000000000000000000000000000000000000012651021003422812160000001400613
..................................................................................................................................................................CGGTTTTCGATTTGGTTTGACTG.......................................................................................................................................................................................................................231170.0017015101630601000002012010010001311220100005200000000201001000058030350001418510171100000
..........................................................................................................................................................................................................GATCATTTTGAAAGCTGAT...................................................................................................................................................................................191150.00150286320113592200120250202012011300201000012000000000000000000151121000020010100000
......................................................................................................................................................................................................GTGAGATCATTTTGAAAGC.......................................................................................................................................................................................191150.00150142100000000000000000000000000000000000000000100016112200291000000002031152420600000
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGATA..................................................................................................................................................................................221148.00148001360000000000000010000001010000100010100000000000000000000001000000011000000012
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGACTC.......................................................................................................................................................................................................................241145.001458172060260000000310122210200014114120000030000001010010000000105660000545410410001
droMoj3
------------------------------------------------------------------------------------------------------------------------------------------------ATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTTTTTTATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATAACCACA--------------------------------------TTCCACATCCCAATGGT----------------------------------TTTTG-----------------T------------------------GTGCCCTGCACAC----------SizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATT..................................................................................................................................................................................2312060835.0020608354292952926429115867761217159269226
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAT...................................................................................................................................................................................2211235924.001235924200864738182905081334317040533818
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGACT........................................................................................................................................................................................................................231112710.00112710125371285509881935293969
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATC..................................................................................................................................................................................23168715.00687153343395431793562616736
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGA....................................................................................................................................................................................21154251.005425122077185269476321001311650
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTT.................................................................................................................................................................................24145408.004540812657106311613488197797260
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGATT..................................................................................................................................................................................22127339.0027339250208710227420
..................................................................................................................................................................CGGTTTTCGATTTGGTTTGACT........................................................................................................................................................................................................................22126648.0026648202244912323623290528
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTC.................................................................................................................................................................................24120787.0020787107341056519298266723
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAC...................................................................................................................................................................................22119640.00196404961378919224180
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGACC........................................................................................................................................................................................................................23116919.00169197220169035
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGAT...................................................................................................................................................................................21112887.001288712471215635826
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATA..................................................................................................................................................................................2319166.00916632661511012584623767
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTG.....................................................................................................................................................................................2017792.0077923606315871519701979
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGAC.........................................................................................................................................................................................................................2216318.0063181329361692894233262
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTA.................................................................................................................................................................................2415630.0056301998125551862438828
..................................................................................................................................................................CGGTTTTCGATTTGGTTTGACC........................................................................................................................................................................................................................2214439.004439100044380
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCT......................................................................................................................................................................................1913327.003327988162115541331425
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGC.......................................................................................................................................................................................1812581.00258127512044222615
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAA...................................................................................................................................................................................2211394.00139446191546712151
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATG..................................................................................................................................................................................2311350.0013501116734115735
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGA....................................................................................................................................................................................2011222.0012221201011082
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATAA.................................................................................................................................................................................2411109.00110961993445222
......................................................................................................................................................................................................GTGAGATCATTTTGAAAGCTGAT...................................................................................................................................................................................231979.00979191123513422225
..................................................................................................................................................................CGGTTTTCGATTTGGTTTGAC.........................................................................................................................................................................................................................211924.0092414715287457
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATAAA................................................................................................................................................................................251904.0090458070527933
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAAA...............................................................................................................................................................................261862.0086249890032332
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGA..........................................................................................................................................................................................................................211854.008545444486212373
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGATTT.................................................................................................................................................................................231839.00839796000430
.........................................................................................................................................................................................................AGATCATTTTGAAAGCTGATT..................................................................................................................................................................................211824.008245773152335
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAAA..................................................................................................................................................................................231638.0063825214935319
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGATTC.................................................................................................................................................................................231613.0061360700231
......................................................................................................................................................................................................GTGAGATCATTTTGAAAGCTGATT..................................................................................................................................................................................241470.0047025571018819
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGACTT.......................................................................................................................................................................................................................241463.0046328006129966
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGACTC.......................................................................................................................................................................................................................241401.00401200141426156
..........................................................................................................................................................................................................GATCATTTTGAAAGCTGATT..................................................................................................................................................................................201396.003961270232604
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTG.................................................................................................................................................................................241393.00393236112345456
.........................................................................................................................................................................................................AGATCATTTTGAAAGCTGAT...................................................................................................................................................................................201332.00332281023379
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAA................................................................................................................................................................................251328.0032821330210010
...........................................................................................................................................................................................................ATCATTTTGAAAGCTGATT..................................................................................................................................................................................191328.00328970062187
............................................................................................................................................................................................................TCATTTTGAAAGCTGATT..................................................................................................................................................................................181309.00309652142316
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGATC..................................................................................................................................................................................221287.002871630011221
...................................................................................................................................................................GGTTTTCGATTTGGTTTGACT........................................................................................................................................................................................................................211275.002751511111147
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTT................................................................................................................................................................................251265.0026513829393938
...........................................................................................................................................................................................................ATCATTTTGAAAGCTGAT...................................................................................................................................................................................181253.0025336221341159
..................................................................................................................................................................CGGTTTTCGATTTGGTTTGACTC.......................................................................................................................................................................................................................231203.0020371311173170
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTG...........................................................................................................................................................................................................................201185.001851411817315
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGATA..................................................................................................................................................................................221179.0017917200070
..........................................................................................................................................................................................................GATCATTTTGAAAGCTGAT...................................................................................................................................................................................191175.00175940106119
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTG.....................................................................................................................................................................................191174.0017417300001
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAG...................................................................................................................................................................................221168.00168234113581518
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTCA................................................................................................................................................................................251168.001681020217146
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTCC................................................................................................................................................................................251163.001631180517023
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGT....................................................................................................................................................................................211137.001373422153522
droGri2
TATGTATGTATGTGTGTACACTCA---------------------------AGGAAAAC-GAACTAAAA-----TGGAA-TATTAAAAGTGCTCTCTCTCT-CTCTAAGTGTGTGCGTCTCTCTGTCTCCAT----CACTACCTATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCAGACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCAATGGT-G------------------------------TTTTTTT-----------------TTG-------------------TGTGTGC-------------------SizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAT...................................................................................................................................................................................221269880.0026988064119205761
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATT..................................................................................................................................................................................231228352.00228352117614110738
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTT.................................................................................................................................................................................24110552.001055269513601
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGA....................................................................................................................................................................................2119154.00915448284326
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGATT..................................................................................................................................................................................2217269.007269724821
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGAT...................................................................................................................................................................................2114076.004076405917
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGACT........................................................................................................................................................................................................................2311823.0018231118705
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTG.....................................................................................................................................................................................2011417.001417722695
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATA..................................................................................................................................................................................2311059.001059280779
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATC..................................................................................................................................................................................231943.0094357886
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCT......................................................................................................................................................................................191561.00561397164
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATG..................................................................................................................................................................................231559.0055973486
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGATTT.................................................................................................................................................................................231458.004584571
..................................................................................................................................................................CGGTTTTCGATTTGGTTTGACT........................................................................................................................................................................................................................221440.00440278162
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTA.................................................................................................................................................................................241374.00374169205
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGC.......................................................................................................................................................................................181361.003613556
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGA....................................................................................................................................................................................201255.002552532
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAC...................................................................................................................................................................................221238.0023811227
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTG.................................................................................................................................................................................241181.0018117110
......................................................................................................................................................................................................GTGAGATCATTTTGAAAGCTGAT...................................................................................................................................................................................231178.0017861117
.........................................................................................................................................................................................................AGATCATTTTGAAAGCTGATT..................................................................................................................................................................................211164.001641640
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAA...................................................................................................................................................................................221155.0015555100
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGAC.........................................................................................................................................................................................................................221145.0014510738
.........................................................................................................................................................................................................AGATCATTTTGAAAGCTGAT...................................................................................................................................................................................201101.00101947
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTC.................................................................................................................................................................................24193.00937617
......................................................................................................................................................................................................GTGAGATCATTTTGAAAGCTGATT..................................................................................................................................................................................24193.00937518
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTT................................................................................................................................................................................25151.00513615
..........................................................................................................................................................................................................GATCATTTTGAAAGCTGATT..................................................................................................................................................................................20144.0044440
...........................................................................................................................................................................................................ATCATTTTGAAAGCTGAT...................................................................................................................................................................................18143.00431726
...........................................................................................................................................................................................................ATCATTTTGAAAGCTGATT..................................................................................................................................................................................19143.0043385
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGA..........................................................................................................................................................................................................................21143.0043358
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTG.....................................................................................................................................................................................19142.0042420
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTGG................................................................................................................................................................................25136.0036360
............................................................................................................................................................................................................TCATTTTGAAAGCTGATT..................................................................................................................................................................................18131.0031292
..........................................................................................................................................................................................................GATCATTTTGAAAGCTGAT...................................................................................................................................................................................19130.0030300
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGACTT.......................................................................................................................................................................................................................24127.00271413
...................................................................................................................................................................GGTTTTCGATTTGGTTTGACT........................................................................................................................................................................................................................21126.0026260
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTG................................................................................................................................................................................25121.0021210
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTC................................................................................................................................................................................25119.0019190
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGATA..................................................................................................................................................................................22117.0017170
..................................................................................................................................................................CGGTTTTCGATTTGGTTTGAC.........................................................................................................................................................................................................................21116.0016133
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTA................................................................................................................................................................................25115.0015123
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTG...........................................................................................................................................................................................................................20113.0013112
........................................................................................................................................................................................................GAGATCATTTTGAAAGCT......................................................................................................................................................................................18112.0012120
.........................................................................................................................................................................................................AGATCATTTTGAAAGCTGA....................................................................................................................................................................................19112.0012120
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATCA.................................................................................................................................................................................24112.0012102
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATAA.................................................................................................................................................................................24111.001165
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGATTA.................................................................................................................................................................................23110.0010100
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATGG.................................................................................................................................................................................24110.0010100
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAG...................................................................................................................................................................................22110.001046
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTTT...............................................................................................................................................................................26110.001064
.........................................................................................................................................................................................................AGATCATTTTGAAAGCTGATTT.................................................................................................................................................................................2219.00990
......................................................................................................................................................................................................GTGAGATCATTTTGAAAGCTGA....................................................................................................................................................................................2219.00945
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGACG........................................................................................................................................................................................................................2318.00808
.................................................................................................................................................................CCGGTTTTCGATTTGGTTTGACC........................................................................................................................................................................................................................2318.00817
.................................................................................................................................................................CCGGTTTTCGATTTGGTT.............................................................................................................................................................................................................................1817.00770
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAAA..................................................................................................................................................................................2317.00725
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTGGC...............................................................................................................................................................................2617.00770
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTCA................................................................................................................................................................................2517.00770
.............................................................................................................................................................................................................CATTTTGAAAGCTGATTT.................................................................................................................................................................................1816.00660
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTCC................................................................................................................................................................................2516.00642
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGT....................................................................................................................................................................................2116.00642
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTCG................................................................................................................................................................................2516.00660
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGG....................................................................................................................................................................................2116.00633
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATGGC................................................................................................................................................................................2515.00550
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAA................................................................................................................................................................................2515.00532
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGATTG.................................................................................................................................................................................2315.00550
......................................................................................................................................................................................................GTGAGATCATTTTGAAAGCTGATTT.................................................................................................................................................................................2515.00550
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGATG..................................................................................................................................................................................2215.00550
................................................................................................................................................................ACCGGTTTTCGATTTGGTTTGACT........................................................................................................................................................................................................................2415.00550
........................................................................................................................................................................................................GAGATCATTTTGAAAGCTGATTC.................................................................................................................................................................................2315.00550
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTGACC..................................................................................................................................................................................2314.00404
.......................................................................................................................................................................................................TGAGATCATTTTGAAAGCTTT....................................................................................................................................................................................2114.00404

Generated: 10/20/2015 at 07:38 PM