ID:

dpe_978

 Coordinate:

scaffold_2:318213-318363 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [dper_GLEANR_11161:4]; CDS [Dper\GL11039-cds]; intron [Dper\GL11039-in]

Repeatable elements

NameClassFamilyStrand
Helitron-1N1_DVirRCHelitron-

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TACAACCCCCCGGAGGGGCACCACACCTACTCCGCCGTAAGCAAAATAAGGTAAGTACCACACTTTAAATTCGTATAGAAAAAAATACTTGCGTAAGTATGTACATATGTGCATAGCTTAAATCTAAATTCTTTGGAAAACAATTTGGTTACATATCTTCTATTTGTTAATTATACCCGATACTCAAAATGAGTATTGGGGTATATTAGATTTGTGGTAAAAGTGGATGTGTGTAACGTCCAGAAGGAATC
**************************************************(((((((......((((........))))......))))))).(((((((((((....)))))).)))))..((((((...)))))).(((((..(((...........))).))))).......(((((((((((...))))))))))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 V042
embryo
 V057
head
...................................................................................................................................................................................................................................TGTGTGTAACGTCCAGAAGGA... 21 0 20 0.25 5 5 0 0
..........CGAAGGGTCACAACACCTA.............................................................................................................................................................................................................................. 19 3 10 0.10 1 0 0 1
..................................................................................................................................................................................................ATTGGGGTATATTAGATTTGTGGT................................. 24 0 20 0.10 2 0 2 0

Anti-sense strand reads

ATGTTGGGGGGCCTCCCCGTGGTGTGGATGAGGCGGCATTCGTTTTATTCCATTCATGGTGTGAAATTTAAGCATATCTTTTTTTATGAACGCATTCATACATGTATACACGTATCGAATTTAGATTTAAGAAACCTTTTGTTAAACCAATGTATAGAAGATAAACAATTAATATGGGCTATGAGTTTTACTCATAACCCCATATAATCTAAACACCATTTTCACCTACACACATTGCAGGTCTTCCTTAG
**************************************************(((((((......((((........))))......))))))).(((((((((((....)))))).)))))..((((((...)))))).(((((..(((...........))).))))).......(((((((((((...))))))))))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total V042
embryo
.........................................................GGTGTTGAATTTAAGCATC............................................................................................................................................................................... 19 3 20 0.05 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_2:318163-318413 - dpe_978 TACAACCCCCCGGAGGGGCACCACACC----------TAC------------------------TCCGCCGTA------------------AGCAAAATAAGG--TAAGT------------ACCACACTTTAAATTCGTATA-----------------------------------------------------GAA-----AAAAATACTT----------------------GCGTAAGTATGTACATATGTGCATAGCTTAAATCTAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTTG-G--AAAACAAT---------------TTGGTTACA-----------------------------------------TATCT-----------------------------------TCTATTTG--------TTAATTATACCC----GAT-----------ACTCAA-----AA-------------TGAGTA--TTGGGGTATATTAGATTTGTGGTAAAAGTGGAT--GTGTGTAACGTCCAGAAGGAATC
dp5 3:128192-128366 - TACAACCCCCCGGAGGGGCACCACACC----------TAC------------------------TCCGCCGTA------------------AGCAAAATAAGG--TAAGT------------ACCACACTTTAAATTCGTATT-----------------------------------------------------GAA-----AAAAATACTT----------------------GCGTAAGTATGTACATATGTGCATAGCTTAAGTCTAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTTG-G--AAAACAAT---------------TTGGTTACA-----------------------------------------TAT--------------------------------------------------------CTTCTATTT----GTT-----------AATTTT--------------------A-----------------------------------------------------------------
droWil2 scf2_1100000001373:7132-7349 - GAAAGCGCACCAAAAGGGCACGACTAA---------------------------------------------A------------------ACCAAAACAAAA--GAGAT------------ACCACTCCTCAATTACTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAAAATTGTTTATAGTATATT--AA-ATAAATA-AATTATATATATTAAATAT--AAATTTAATTAAATATATATTATT-AAG------------TAT---------------------------------------------------------------------------A---C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATAAAA----GAA-----------ATA-------TAA-------------TTGCAA--AAAGAGTATATTAATTTTGATCA-------GAA--GTGTGCAACGCATAGAAGGAAGC
droVir3 scaffold_12947:94982-95169 - TAAGGCATAT-----ACACACTACACC---------------------------------------------------------------------------------------TCCCTTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAAGAAATAACGTAA---------------------------------------------------------------------------CATTATGGATATCA---T----------------------------------------------------------------------------TAAAT---------------------------------------AAAATGAAATTTAT----TATTTGTTTGTATACAA-TT--------TTTATTATACCC----TGA-----------AAAAA-TGAAAAA-------------TGGGTA--TAAGGGTATATTGTATTTGTGCGAAATTCAAAT--GTATGTAACAGGCGGAAGGAAGC
droMoj3 scaffold_6498:1889401-1889634 - AAGGCCGTCA-------------CATT----------T--------------------------------------------------------------------GCCA---AGCTAATCA----------AAACAAGAAATTGGTTCACTCTCA----------------------------------------T------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATTCCAAGAAGATAT--TTAATTT------------------------------------AAAGACGAACAA----AGTTTTTGTAAATTTAAT----------------------------------------------------------T-----------------------TTCGCTTGTCATATAAGGC---------------CTACTAGT-TT---------------------------------------------------------------------------------TAT-ATTATATTATATTTTTATACCC----TGA-----------ACCCA-TTTTCAAT------------GGGAAA--TCAGGGTATAATGGTTATGTGGA-------AAT--GTATGTAACAGGCAGAAGGAGGC
droGri2 scaffold_15112:4369981-4370230 - CCCGAAACCCT------GCCCCACACCTTACGTCTGA---CA----------------------CTTGCTGTA------------------AGCAAAATA-----ACAGC---AT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCATTCTTAAGAGACAC--ACAGGCAGACAGACAGACACACTG-AGA------------GAC---------------------------------------------------------------------------A---TGTGCGAGTAAAATGTGCGAATGGCTTTGGGCTGAAGTTTTTTG-G--CCAATGTT---------------TTTGCTGCG-----------------------------------------T---------------------------------------------------------TTTCGTTTTCGATTTTT-----------CCTTA-----TAA-------------CCGGAA--AATGGGTATAATGTAGTTAAGAA-------GAA--GAATGTAATAAGCAGAAGGAAAC
droAna3 scaffold_13260:581893-582076 - AAAATAAGAT------------------------------------------------------------------------------------------------TATTCAGA----------CACA-TTTGAAATCGTATT-----------------------------------------------------CAA-----TATATCATGG----------------------GTGTACATATTGACAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGAGCGTTTCTTA---GTATAACATATTGCTGGCTCTAAA-----------------------------------------------CA-----------------------------------------TATAT-----------------------------------TTTT-------TTTATATTATTATACCC----TT------------------------------------------GC--AGAGGGTATTATAATTTTGGTCA-------AAA--GTGTGCAACGCAGTGAAGGAGAC
droBip1 scf7180000395526:10589-10814 + CCGCGAAAAA-----A------------------------AA--------------------------------AATAGGTGGTAAGTACA-----CATG-----TACCT---ATGTATATT----------A----------------------------------------------------------------AA-----GTAAGT--------------------------ATATATATACATA--------------------------------------------TACA----------------------------------------------------------TATACATAT-------------------------------------------------------------------------------------------------------------------------TATAGTTATATTTACGA---T----------------------------------------------------------------------------TAAAA---------------------------------------ATTTTGTGTTTTGT----AGTTTGTTATACTTGAA-AT--------ATTTTTATTCCC----GTTAGAGTTTTTATACTCGT--------------------AGAGTT--CTAGGGTATATTGTACTTGTGTG-------AAC--TTATTTAACATAGTGAAGGAATT
droKik1 scf7180000301923:75523-75707 - GTAAATTAAA-----G------------------------A-----------------------------------------------------------ACA--TGAAT------------AATAAAGTCTAAAT--------------------------------------------------------------------------------------AATGTAAAATAATTAGACAACTTTA-AAATATGT------------------------------TAT--------------------------------------------------------------------------------------------------------------------------------------------------------TAAATTTAT----------------------------------------------------------G-----------------------TTCTTTTGGTTTAAATAAT---------------TTGTTTAT-TT---------------------------------------------------------------------------------GAG-GTTATGTCATTTTATTATACCC----T--------------------------------------------T--GCAGGGTATTATAATTTCAGTCA-------GAA--GTTTGCAACGCAGTGAAGGAGAC
droFic1 scf7180000454115:664866-665056 - GCAACAAAAA-----AATG---------------------A-----------------------------------------------------------AGA--TAAGT------------AATGATACTCAAGTATGTATG-----------------------------------------------------TGA-----AAAACAAAAA----------------------ACATCAATGGCTAAATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAGTTTAACGA----ATTATCTGTAAAAACAATTGACTTTTCTTATTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC-------CAG-TG--------TTTATTATACCC----TT------------------------------------------TC--AGAGGGTACTGTATTTTAAGTCT-------AAA--GTTTGCAACGCAGAGAAGGAGAC
droEle1 scf7180000490639:5591-5775 + ACTTTAA-------------------------------------------------------------------------------------------------------------------------------ATCGATTTT-----------------------------------------------------C--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAAAAAAGTATTTTTTGAAGTTCGTGAACTTCAAA---ACTCAAA-----------------------ATCTACTGAACCGATCCTTTTGAAAAT-------TTGAA--CG-----------------------------------------TAACT-----------------------------------TCTT---------------CACATAAAT----C------------------------AGCAGGATATCACGAAGAGTATAAAAGACTATATTGCATTTGTTGA-------AAA--GTATGTAACAGGTAGAAGGAAGC
droRho1 scf7180000763754:2099-2313 + GATACTTCAT----------------T-------------TACTCGTTGTCCACAAAGTGTATT---------AACATAATTTAAATTGT-----------AA--GACAT----------------------------ATG------------------------------------------------A-------AAATTAAT-TTACAATTGTTTATATATTGTATGAAAATAAGACA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTG-A--AAAATAA-------------------AATACA-----------------------------------------T---------------------------TTTTA----TACTATAT-AA--------TATATTATATTT----GAT-----------ACTCT----------------------CTGCA--AGGGAGTATTATAATTTTGGTCA-------GAA--GTTTGTAACGCAGTGAAAGAGAC
droBia1 scf7180000302421:1607231-1607435 + TAACCAGAAA-----AAGT---------------------T--------------------------------AAATAAATTTCAATTAT------------------------------------------AAATTTATT------------------------------------------------A-------AAATAAAA---------------------------------------TTA-AGATATG------------------------------TTTAAATATATT--------------------------------------------------------------------G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G--TTGTCATATTGGTTATATAAAGATGACATCC-TTGAGATGAGAAACAAAC---------------------------------------------------------------TG---------ATTATGTTATTATACCC----GTT-----------AATCGT--------------------AGAGTA---AAGGGTATACTAGATTCGTCGG-------AAA--GTATGTAACAGGTAAAAGGAAGC
droTak1 scf7180000414533:4614-4863 + GGAAACC---------------GCGTC----------TAT------------------------TCCGGTGG------------------------------------------------------------ACAG--------------------------------------------------------------------------------------AATTTTTAAAATTTAAAGTCCCTTA-AAAAATA------------------------------TTTAAATATCTTAAACGAGTCTCTAGTGCTGCAT-----------------------------------------AACTTAAAAATCGGAGCTTAATCAGAAAAATATTTTTTAAAAATGTACGGTAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGCAGGGACCGTAAATAACA-----------------------------------GTTAT-TT--------GTGATTATACCC----GTT-----------ACTCGT--------------------AGAGTA--AAAGGGTATATTGTATTCGTGCA-------AAA--GTATGTAACAGCTAGAAGGAAGC
droEug1 scf7180000408828:37930-38118 - CTGCTCCTAT------------------------------------------------------------GTA------------------GATAAAACGTCGTGCAACT------------GTTACAGCATGAGTTG-----------------GCGAA------------------------------------GAA-----GGCTACACTT----------------------GCCGAAATATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATGT-----------TCATTTAAGATTACTTCATTACCAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAT-AT--------CTTTTTATACCC----GTT-----------ACTCGT--------------------AGAGTA--AAAGGGTATATTAGATTCGTTGA-------AAA--GTATGTAACAGGTAGAAAGAAGC
dm3 chr2R:4257935-4258137 + ACCAGACTCT-----A------------------------AAGACGT--------------------------------TAGCGCAGCACA--------------AAATG------------GTTTTGGTAGAATTTG-----------------CCGCA---------------------------------------------------------------------------------------------------GAACCTGTCTCCAAA-------------------TACTTTTCGCGACCTAAGTGCTGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAAAAT---------------TTTATTATA-----------------------------------------CTT----------------------------TT----TATTTTAT-TTTATATTATATTA-------------TT-----------ATATTT--------------------AGAGTA--AATGGGTATACTAGATTCGTTTA-------AAAATGTATGTAACAATCAGATGGAAGC
droSim2 3l:22967500-22967721 + CTACGCACAC------------------------------------------------------TTAGTTTTA------------------AGCACAATG-----TACGC---ATCCAACTT----------ACATTAGTATTTAGATCGTGCTCACGAA------------------------------------GAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAAAACTAAGTGTGTGTACGTACAATAAATATAATAAATTAAATTAAAT-TTCCGTCTTTCC----GATTTTAC-TT--------CTTATTATACCC----GTT-----------ACTTGT--------------------ATAGTA--AAAGCTTATACTATATTCGTTGA-------AAA--GTATTTAACAGGCAGAATGAAGC
droSec2 scaffold_2822:4786-4999 - CTACGCATAC------------------------------------------------------TTAGTTTTA------------------AGCACAATG-----TACGC---ATCCAACTT----------ACATTAGTATTTAGATCGTGCTCA----------------------------------------AAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAAAACTAAGTGTGTGTACGTACAATAAATATAATAAATTAAATTAAAT-TAC----TTTCC----GATTTTAC-TT--------CTTATTATTCCC----GTT-----------ACTTGT--------------------AAAGTA--AAAGGGTATACTATATTCGTTGA-------AAA--GTATTTAACAGGCAGAATGAAGC
droYak3 v2_chrUn_024:10365-10595 - TACAGAACTTAAGAGGGGAACTACCTT----------TAG--------------------------------A------------------GG--------------------------------------------------------------CCGAATAAACAGACTCCGAAAATCAAAATTTGTGATTTTTACAA-----AAAAATGCGT----------------------GG-----------TAAATGTTTGTTTTTTAAATCTTTAGTCTCTTTAAA---------------------ATAAGTGCTAGAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTAAAGTAAAG-TT-----------------------CA--------GTAGTTATACCC----GTT-----------ACTCGT--------------------AGAGTA--AAAGGGTATACTAGATTCGTTGA-------AAA--GTATGTAACAGGCAGAAGGAAGC
droEre2 scaffold_4784:16241175-16241359 - TATTCTGCCA-------------T----------------C--------------------------------------------------AC---T---------AAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A---------------------GTAAATGCTA---------GCTTATACTCTATATAAAATTATATAGAATTATATATATTAAAT---------------------------------------------------TATA----TATAAG-----------TTGCTTGAAATCTGTTTTTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GC---------C-TA--------CTCATTATACCC----GTC-----------ACTCTC--------------------AGAGTA--AGAGGGTATACTAGATTCGTTGA-------AAG--GTATGTAACAGCTTGAAGGAAGC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
TACAACCCCCCGGAGGGGCACCACACC----------TAC------------------------TCCGCCGTA------------------AGCAAAATAAGG--TAAGT------------ACCACACTTTAAATTCGTATA-----------------------------------------------------GAA-----AAAAATACTT----------------------GCGTAAGTATGTACATATGTGCATAGCTTAAATCTAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTTG-G--AAAACAAT---------------TTGGTTACA-----------------------------------------TATCT-----------------------------------TCTATTTG--------TTAATTATACCC----GAT-----------ACTCAA-----AA-------------TGAGTA--TTGGGGTATATTAGATTTGTGGTAAAAGTGGAT--GTGTGTAACGTCCAGAAGGAATCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--GTGTGTAACGTCCAGAAGGA...21200.255050000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--TTGGGGTATATTAGATTTGTGGT...................................24200.102002000
dp5
TACAACCCCCCGGAGGGGCACCACACC----------TAC------------------------TCCGCCGTA------------------AGCAAAATAAGG--TAAGT------------ACCACACTTTAAATTCGTATT-----------------------------------------------------GAA-----AAAAATACTT----------------------GCGTAAGTATGTACATATGTGCATAGCTTAAGTCTAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTTG-G--AAAACAAT---------------TTGGTTACA-----------------------------------------TAT--------------------------------------------------------CTTCTATTT----GTT-----------AATTTT--------------------A-----------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
......................ACACC----------TAC------------------------TCCGCCGTA------------------AGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.....................................................................................................................................................................................................................................................TGTACATATGTGCATAGCTTA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...................ACCACACC----------TAC------------------------TCCGCCGTA------------------A..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..............................................................................................................................CACTTTAAATTCGTATT-----------------------------------------------------GAA-----..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
droWil2
GAAAGCGCACCAAAAGGGCACGACTAA---------------------------------------------A------------------ACCAAAACAAAA--GAGAT------------ACCACTCCTCAATTACTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAAAATTGTTTATAGTATATT--AA-ATAAATA-AATTATATATATTAAATAT--AAATTTAATTAAATATATATTATT-AAG------------TAT---------------------------------------------------------------------------A---C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATAAAA----GAA-----------ATA-------TAA-------------TTGCAA--AAAGAGTATATTAATTTTGATCA-------GAA--GTGTGCAACGCATAGAAGGAAGCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..................CACGACTAA---------------------------------------------A------------------ACCAAAACAAAA--GAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.15303000
................GGCACGACTAA---------------------------------------------A------------------ACCAAAACAAAA--GA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26190.05101000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCA-------GAA--GTGTGCAACGCATAGAAGGAAG.28200.05101000
...................ACGACTAA---------------------------------------------A------------------ACCAAAACAAAA--GAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
......................ACTAA---------------------------------------------A------------------ACCAAAACAAAA--GAGAT------------A...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGCATAGAAGGAAGC18200.05100010
droVir3
TAAGGCATAT-----ACACACTACACC---------------------------------------------------------------------------------------TCCCTTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAAGAAATAACGTAA---------------------------------------------------------------------------CATTATGGATATCA---T----------------------------------------------------------------------------TAAAT---------------------------------------AAAATGAAATTTAT----TATTTGTTTGTATACAA-TT--------TTTATTATACCC----TGA-----------AAAAA-TGAAAAA-------------TGGGTA--TAAGGGTATATTGTATTTGTGCGAAATTCAAAT--GTATGTAACAGGCGGAAGGAAGCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......TAT-----ACACACTACACC---------------------------------------------------------------------------------------TCCCTTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAAG........................................................................................................................................................................................................................................................................................................................................................................................................2860.171000000000000000000000000000010000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................TAAAGAAATAACGTAA---------------------------------------------------------------------------CATTATGGA.........................................................................................................................................................................................................................................................................................................2570.141000000000000000000000000100000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTGTATTTGTGCGAAATTC.............................2170.141000000000000000000000000000000010000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--GTATGTAACAGGCGGAAGGA...21150.132000000000100000000000000000010000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTATATTGTATTTGTGCGAAATTAT............................26100.101000000000000000000000000001000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATGTAACAGGCGGAAGGAAGC23130.081000000000000000000000000000001000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................AAAGAAATAACGTAA---------------------------------------------------------------------------CATTAT............................................................................................................................................................................................................................................................................................................21150.071000000000000000000000000000000000000010000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTAACAGGCGGAAGGAAGC21160.061000000000000000000000000000010000000000000000000000000000000000
TAAGGCATAT-----ACACACTACACC---------------------------------------------------------------------------------------TCCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26190.051000000000000000000000000000010000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAAAT--GTATGTAACAGGC..........20200.051000000000000000000000000010000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGTATATTGTATTTGTGCG...................................21200.051000000000000000000000000000000010000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAAAA-------------TGGGTA--TAAGC.....................................................18200.051000000000000000000000000000000000000100000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTATATTGTATTTGTGCGAAA................................22200.051001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGTAACAGGCGGAAGGA...19200.051000000000000000000000000000001000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATGTAACAGGCGGAAG.....18200.051000000000000000000000000000010000000000000000000000000000000000
droMoj3
AAGGCCGTCA-------------CATT----------T--------------------------------------------------------------------GCCA---AGCTAATCA----------AAACAAGAAATTGGTTCACTCTCA----------------------------------------T------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATTCCAAGAAGATAT--TTAATTT------------------------------------AAAGACGAACAA----AGTTTTTGTAAATTTAAT----------------------------------------------------------T-----------------------TTCGCTTGTCATATAAGGC---------------CTACTAGT-TT---------------------------------------------------------------------------------TAT-ATTATATTATATTTTTATACCC----TGA-----------ACCCA-TTTTCAAT------------GGGAAA--TCAGGGTATAATGGTTATGTGGA-------AAT--GTATGTAACAGGCAGAAGGAGGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------------GGGAAA--TCAGGGTATAATGGTTA.........................................24200.306500001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------------GGGAAA--TCAGGGTATAATGGTTAT........................................25190.112200000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGA-------AAT--GTATGTAACAGGCAGAAGGAG..27110.091100000
droGri2
CCCGAAACCCT------GCCCCACACCTTACGTCTGA---CA----------------------CTTGCTGTA------------------AGCAAAATA-----ACAGC---AT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCATTCTTAAGAGACAC--ACAGGCAGACAGACAGACACACTG-AGA------------GAC---------------------------------------------------------------------------A---TGTGCGAGTAAAATGTGCGAATGGCTTTGGGCTGAAGTTTTTTG-G--CCAATGTT---------------TTTGCTGCG-----------------------------------------T---------------------------------------------------------TTTCGTTTTCGATTTTT-----------CCTTA-----TAA-------------CCGGAA--AATGGGTATAATGTAGTTAAGAA-------GAA--GAATGTAATAAGCAGAAGGAAACSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
AAAATAAGAT------------------------------------------------------------------------------------------------TATTCAGA----------CACA-TTTGAAATCGTATT-----------------------------------------------------CAA-----TATATCATGG----------------------GTGTACATATTGACAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGAGCGTTTCTTA---GTATAACATATTGCTGGCTCTAAA-----------------------------------------------CA-----------------------------------------TATAT-----------------------------------TTTT-------TTTATATTATTATACCC----TT------------------------------------------GC--AGAGGGTATTATAATTTTGGTCA-------AAA--GTGTGCAACGCAGTGAAGGAGACSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAACATATTGCTGGCTCTAAA-----------------------------------------------CA-----------------------------------------TA................................................................................................................................................................................2720.501010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTGGTCA-------AAA--GTGTGCAACG.............23200.204400000
droBip1
CCGCGAAAAA-----A------------------------AA--------------------------------AATAGGTGGTAAGTACA-----CATG-----TACCT---ATGTATATT----------A----------------------------------------------------------------AA-----GTAAGT--------------------------ATATATATACATA--------------------------------------------TACA----------------------------------------------------------TATACATAT-------------------------------------------------------------------------------------------------------------------------TATAGTTATATTTACGA---T----------------------------------------------------------------------------TAAAA---------------------------------------ATTTTGTGTTTTGT----AGTTTGTTATACTTGAA-AT--------ATTTTTATTCCC----GTTAGAGTTTTTATACTCGT--------------------AGAGTT--CTAGGGTATATTGTACTTGTGTG-------AAC--TTATTTAACATAGTGAAGGAATTSizeHit CountTotal NormTotal
No Reads
droKik1
GTAAATTAAA-----G------------------------A-----------------------------------------------------------ACA--TGAAT------------AATAAAGTCTAAAT--------------------------------------------------------------------------------------AATGTAAAATAATTAGACAACTTTA-AAATATGT------------------------------TAT--------------------------------------------------------------------------------------------------------------------------------------------------------TAAATTTAT----------------------------------------------------------G-----------------------TTCTTTTGGTTTAAATAAT---------------TTGTTTAT-TT---------------------------------------------------------------------------------GAG-GTTATGTCATTTTATTATACCC----T--------------------------------------------T--GCAGGGTATTATAATTTCAGTCA-------GAA--GTTTGCAACGCAGTGAAGGAGACSizeHit CountTotal NormTotal
No Reads
droFic1
GCAACAAAAA-----AATG---------------------A-----------------------------------------------------------AGA--TAAGT------------AATGATACTCAAGTATGTATG-----------------------------------------------------TGA-----AAAACAAAAA----------------------ACATCAATGGCTAAATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAGTTTAACGA----ATTATCTGTAAAAACAATTGACTTTTCTTATTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC-------CAG-TG--------TTTATTATACCC----TT------------------------------------------TC--AGAGGGTACTGTATTTTAAGTCT-------AAA--GTTTGCAACGCAGAGAAGGAGACSizeHit CountTotal NormTotal
No Reads
droEle1
ACTTTAA-------------------------------------------------------------------------------------------------------------------------------ATCGATTTT-----------------------------------------------------C--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAAAAAAGTATTTTTTGAAGTTCGTGAACTTCAAA---ACTCAAA-----------------------ATCTACTGAACCGATCCTTTTGAAAAT-------TTGAA--CG-----------------------------------------TAACT-----------------------------------TCTT---------------CACATAAAT----C------------------------AGCAGGATATCACGAAGAGTATAAAAGACTATATTGCATTTGTTGA-------AAA--GTATGTAACAGGTAGAAGGAAGCSizeHit CountTotal NormTotal
No Reads
droRho1
GATACTTCAT----------------T-------------TACTCGTTGTCCACAAAGTGTATT---------AACATAATTTAAATTGT-----------AA--GACAT----------------------------ATG------------------------------------------------A-------AAATTAAT-TTACAATTGTTTATATATTGTATGAAAATAAGACA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTG-A--AAAATAA-------------------AATACA-----------------------------------------T---------------------------TTTTA----TACTATAT-AA--------TATATTATATTT----GAT-----------ACTCT----------------------CTGCA--AGGGAGTATTATAATTTTGGTCA-------GAA--GTTTGTAACGCAGTGAAAGAGACSizeHit CountTotal NormTotal
No Reads
droBia1
TAACCAGAAA-----AAGT---------------------T--------------------------------AAATAAATTTCAATTAT------------------------------------------AAATTTATT------------------------------------------------A-------AAATAAAA---------------------------------------TTA-AGATATG------------------------------TTTAAATATATT--------------------------------------------------------------------G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G--TTGTCATATTGGTTATATAAAGATGACATCC-TTGAGATGAGAAACAAAC---------------------------------------------------------------TG---------ATTATGTTATTATACCC----GTT-----------AATCGT--------------------AGAGTA---AAGGGTATACTAGATTCGTCGG-------AAA--GTATGTAACAGGTAAAAGGAAGCSizeHit CountTotal NormTotal
No Reads
droTak1
GGAAACC---------------GCGTC----------TAT------------------------TCCGGTGG------------------------------------------------------------ACAG--------------------------------------------------------------------------------------AATTTTTAAAATTTAAAGTCCCTTA-AAAAATA------------------------------TTTAAATATCTTAAACGAGTCTCTAGTGCTGCAT-----------------------------------------AACTTAAAAATCGGAGCTTAATCAGAAAAATATTTTTTAAAAATGTACGGTAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGCAGGGACCGTAAATAACA-----------------------------------GTTAT-TT--------GTGATTATACCC----GTT-----------ACTCGT--------------------AGAGTA--AAAGGGTATATTGTATTCGTGCA-------AAA--GTATGTAACAGCTAGAAGGAAGCSizeHit CountTotal NormTotal
No Reads
droEug1
CTGCTCCTAT------------------------------------------------------------GTA------------------GATAAAACGTCGTGCAACT------------GTTACAGCATGAGTTG-----------------GCGAA------------------------------------GAA-----GGCTACACTT----------------------GCCGAAATATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATGT-----------TCATTTAAGATTACTTCATTACCAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAT-AT--------CTTTTTATACCC----GTT-----------ACTCGT--------------------AGAGTA--AAAGGGTATATTAGATTCGTTGA-------AAA--GTATGTAACAGGTAGAAAGAAGCSizeHit CountTotal NormTotal
No Reads
dm3
ACCAGACTCT-----A------------------------AAGACGT--------------------------------TAGCGCAGCACA--------------AAATG------------GTTTTGGTAGAATTTG-----------------CCGCA---------------------------------------------------------------------------------------------------GAACCTGTCTCCAAA-------------------TACTTTTCGCGACCTAAGTGCTGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAAAAT---------------TTTATTATA-----------------------------------------CTT----------------------------TT----TATTTTAT-TTTATATTATATTA-------------TT-----------ATATTT--------------------AGAGTA--AATGGGTATACTAGATTCGTTTA-------AAAATGTATGTAACAATCAGATGGAAGCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
............................................................................................................................TTTGGTAGAATTTG-----------------CCGCA---------------------------------------------------------------------------------------------------GAACCTGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........T-----A------------------------AAGACGT--------------------------------TAGCGCAGCACA--------------AAATG------------................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
...................................................................................................................................................................................................................................................................................................................TAAGTGCTGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAAAAT---------------TTTATTATA-----------------------------------------CT................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CCAGACTCT-----A------------------------AAGACGT--------------------------------TAGCGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................................................................................................................................................................................................................................................................CTCCAAA-------------------TACTTTTCGCGACC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---------------TTTATTATA-----------------------------------------CTT----------------------------TT----TATTTTA......................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTT--------------------AGAGTA--AATGGGTATACTAGAA..........................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................................................................................................................................................................................................................................................................................................TCGCGACCTAAGTGCTGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAAAAT---------------TTTAT...............................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTA-------------TT-----------ATATTT--------------------AGAGTA--AATGGGT...................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--AATGGGTATACTAGATTCGTTTA-------A...........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................TTTTGGTAGAATTTG-----------------CCGCA---------------------------------------------------------------------------------------------------GAACCTGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTTA-------AAAATGTATGTAACAATCAGA.......2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TCT-----A------------------------AAGACGT--------------------------------TAGCGCAGCACA--------------AAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................TAAGTGCTGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAAAAT---------------TTTATT..............................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................A-------------------TACTTTTCGCGACCTAAGTGCTGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A.........................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......CTCT-----A------------------------AAGACGT--------------------------------TAGCGCAGCACA--------------AAATG------------A...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTA-------AAAATGTATGTAACAATCAGATGGA...2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGTATACTAGATTCGTTTA-------AAAA........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................................................................................................................................................................................................................................................CTAAGTGCTGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAAAAT---------------TTTATTATA-----------------------------------------C.................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........CT-----A------------------------AAGACGT--------------------------------TAGCGCAGCACA--------------AAAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..CAGACTCT-----A------------------------AAGACGT--------------------------------TAGCGCAGCAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................................................................................................................................................................................................................................................................................................TTCGCGACCTAAGTGCTGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAAAAT---------------T...................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................TTTTCGCGACCTAAGTGCTGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAAAA....................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....ACTCT-----A------------------------AAGACGT--------------------------------TAGCGCAGCACA--------------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTTTA-------AAAATGTATGTAACAATCAGAA......2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....ACTCT-----A------------------------AAGACGT--------------------------------TAGCGCAGCACA--------------AAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................................................................................................................................................................................................................................................................................................TTTCGCGACCTAAGTGCTGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAAAA....................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............A------------------------AAGACGT--------------------------------TAGCGCAGCACA--------------A................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................................................................................................TTTGGTAGAATTTG-----------------CCGCA---------------------------------------------------------------------------------------------------GAACCTGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................TAAGTGCTGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAAAAT---------------TTT.................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTTA-------AAAATGTATGTAACAATCA.........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-----------ATATTT--------------------AGAGTA--AATGGGT...................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................CAAA-------------------TACTTTTCGCGACCTAAGTGCTGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------..........................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................................................................................................................................................................................................................................................TCCAAA-------------------TACTTTTCGCGACCTAAGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................................................................................................TTTGGTAGAATTTG-----------------CCGCA---------------------------------------------------------------------------------------------------GAACC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTAGATTCGTTTA-------AAAATGTAT...................2520.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATACTAGATTCGTTTA-------AAA.........................2170.4330000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000001000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--------------------AGAGTA--AATGGGTATACTAGATT.........................................2430.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTATACTAGATTCGTTTA-------AA..........................21100.2020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGGTATACTAGATTCGT......................................2060.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--AATGGGTATACTAGATTCGT......................................2160.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATACTAGATTCGTTTA-------AA..........................20110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTATACTAGATTCGTTTA-------AC..........................21130.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATACTAGATTCGTTTA-------AA..........................19140.0710000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT----TATTTTAT-TTTATATTACC.........................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CTACGCACAC------------------------------------------------------TTAGTTTTA------------------AGCACAATG-----TACGC---ATCCAACTT----------ACATTAGTATTTAGATCGTGCTCACGAA------------------------------------GAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAAAACTAAGTGTGTGTACGTACAATAAATATAATAAATTAAATTAAAT-TTCCGTCTTTCC----GATTTTAC-TT--------CTTATTATACCC----GTT-----------ACTTGT--------------------ATAGTA--AAAGCTTATACTATATTCGTTGA-------AAA--GTATTTAACAGGCAGAATGAAGCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------AAA--GTATTTAACAGGCAGAATGA...2413.00300000001000020000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTGA-------AAA--GTATTTAACAGGCAGA.......2732.33700000004030000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCTTTCC----GATTTTAC-TT--------CT........................................................................................................................2112.00200002000000000000
....................................................................................................................................ACATTAGTATTTAGATCGTGCTCACG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00200000000200000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAC-TT--------CTTATTATACCC----GTT-----------ACT.........................................................................................2412.00200000010100000000
................................................................................................................................................AGATCGTGCTCACGAA------------------------------------GAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.................................................................................................................................................................................................................1912.00200002000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------AAA--GTATTTAACAGGCAGAATGAA..2512.00200000000001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CC----GATTTTAC-TT--------CTTATTATAC................................................................................................................2212.00200002000000000000
..............................................................................................................................................TTAGATCGTGCTCACGAA------------------------------------GAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAA.............................................................................................................................................................................................................2512.00200000001001000000
...........................................................................................AGCACAATG-----TACGC---ATCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00200002000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTATACTATATTCGTT.....................................1812.00200002000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATATTCGTTGA-------AAA--GTAT...................2061.33800008000000000000
..............................................................................................................................................TTAGATCGTGCTCACGAA------------------------------------GAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAA............................................................................................................................................................................................................2611.00100000000001000000
.....................................................................................................................................CATTAGTATTTAGATCGTGCTA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000000001000
........................................................................A------------------AGCACAATG-----TACGC---ATCCAACTT----------ACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000001000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------AAA--GTATTTAACAGGCAGAATGAAA.2611.00100000000000010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAAATTAAAT-TTCCGTCTTTCC----GA...........................................................................................................................................2611.00100000001000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGA-------AAA--GTATTTAACAGGCAGAATGA...2611.00100000000100000000
...........................................................................................................CGC---ATCCAACTT----------ACATTAGTATTTAGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000010000000
.........................................................................................................TACGC---ATCCAACTT----------ACATTAGTATT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000000010000
..................................................................................................................TCCAACTT----------ACATTAGTATTTAGATCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000010000000
.............................................................................................................................................TTTAGATCGTGCTCACGAA------------------------------------GAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAA............................................................................................................................................................................................................2711.00100000000001000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTGA-------AAA--GTATTTAACAGGCA.........2540.50200000000020000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTTGA-------AAA--GTATTTAACAGGCAGA.......2640.50200000001010000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTGA-------AAA--GTATTTAACAGGC..........2440.25100000000010000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTTGA-------AAA--GTATTTAACAGGC..........2350.20100000000100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGA-------AAA--GTATTTAACAGGCAGA.......22120.17200000001100000000
droSec2
CTACGCATAC------------------------------------------------------TTAGTTTTA------------------AGCACAATG-----TACGC---ATCCAACTT----------ACATTAGTATTTAGATCGTGCTCA----------------------------------------AAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAAAACTAAGTGTGTGTACGTACAATAAATATAATAAATTAAATTAAAT-TAC----TTTCC----GATTTTAC-TT--------CTTATTATTCCC----GTT-----------ACTTGT--------------------AAAGTA--AAAGGGTATACTATATTCGTTGA-------AAA--GTATTTAACAGGCAGAATGAAGCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTGA-------AAA--GTATTTAACAGGCA.........2570.4333000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTGA-------AAA--GTATTTAACAGGC..........2470.1411000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTGA-------AAA--GTATTTAACAGGCT.........25100.1011000
droYak3
TACAGAACTTAAGAGGGGAACTACCTT----------TAG--------------------------------A------------------GG--------------------------------------------------------------CCGAATAAACAGACTCCGAAAATCAAAATTTGTGATTTTTACAA-----AAAAATGCGT----------------------GG-----------TAAATGTTTGTTTTTTAAATCTTTAGTCTCTTTAAA---------------------ATAAGTGCTAGAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTAAAGTAAAG-TT-----------------------CA--------GTAGTTATACCC----GTT-----------ACTCGT--------------------AGAGTA--AAAGGGTATACTAGATTCGTTGA-------AAA--GTATGTAACAGGCAGAAGGAAGCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGATTCGTTGA-------AAA--GTATGTAACAGG...........27200.35700000000007
..............GGGGAACTACCTT----------TAG--------------------------------A------------------GG--------------------------------------------------------------...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1930.33101000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----------ACTCGT--------------------AGAGTA--AAAGGGTATA................................................23200.05101000000000
droEre2
TATTCTGCCA-------------T----------------C--------------------------------------------------AC---T---------AAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A---------------------GTAAATGCTA---------GCTTATACTCTATATAAAATTATATAGAATTATATATATTAAAT---------------------------------------------------TATA----TATAAG-----------TTGCTTGAAATCTGTTTTTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GC---------C-TA--------CTCATTATACCC----GTC-----------ACTCTC--------------------AGAGTA--AGAGGGTATACTAGATTCGTTGA-------AAG--GTATGTAACAGCTTGAAGGAAGCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATACTAGATTCGTTGA-------AAG--.......................21170.0610000100

Generated: 06/08/2015 at 03:32 PM