ID:

dpe_917

 Coordinate:

scaffold_18:542905-542974 -

 Confidence:

Known Ortholog

 Class:

5p_tailed_mirtron

 Genomic Locale:

intron

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-5.9 -5.9 -5.4

Flybase annnotation

intron [Dper\GL19825-in]; CDS [Dper\GL19825-cds]; CDS [Dper\GL19825-cds]

No Repeatable elements found

Sense Strand Reads

GAGCAGATTCTCAATATTCCCTGGGCTCTGCTGTCCGATGCCCTCACGCAGTACAAAATTTTCTCTTAGAGGAGGAAAGATAGGACCACGCAAATTGCAATGACAGCAGTGAGCCCATAGCGACGGAGCCTTACCACTGGACGAACTGTCTGGGGCATACGGCAAGGTCC

********************************************************************.....................((..(((((.......)))))..))...***************************************************** 		Read size # Mismatch Hit Count Total Norm Total V111

male body		 M042

female body

 V050

head

 V057

head

 M021

embryo
............................................................................................................GTGAGCCCATAGCGACGGAG.......................................... 20 0 1 118.00 118 118 0 0 0 0
....................................................................GAGGAGGAAAGATAGGACC................................................................................... 19 0 1 72.00 72 72 0 0 0 0
..................................................................TAGAGGAGGAAAGATAGGAC.................................................................................... 20 0 1 48.00 48 47 1 0 0 0
........................................................................................................AGCAGTGAGCCCATAGCGACG............................................. 21 0 1 30.00 30 29 0 0 1 0
............................................................................................................GTGAGCCCATAGCGACGGAGC......................................... 21 0 1 29.00 29 29 0 0 0 0
.............................................................................................................................................CGAACTGTCTGGGGCATACGG........ 21 0 1 26.00 26 25 0 1 0 0
.................................................................TTAGAGGAGGAAAGATAGGAC.................................................................................... 21 0 1 21.00 21 20 0 1 0 0
.............................................................................................................................................CGAACTGTCTGGGGCATACG......... 20 0 1 19.00 19 18 1 0 0 0
..........................................................................................................CAGTGAGCCCATAGCGACGGA........................................... 21 0 1 15.00 15 14 0 0 1 0
.............................................................................................................................................CGAACTGTCTGGGGCATAC.......... 19 0 1 12.00 12 12 0 0 0 0
....................................................................GAGGAGGAAAGATAGGACCAC................................................................................. 21 0 1 10.00 10 10 0 0 0 0
....................................................................GAGGAGGAAAGATAGGAC.................................................................................... 18 0 1 8.00 8 8 0 0 0 0
...................................................................CGAGGAGGAAAGATAGGAC.................................................................................... 19 1 1 8.00 8 8 0 0 0 0
..................................................................TAGAGGAGGAAAGATAGGA..................................................................................... 19 0 1 7.00 7 7 0 0 0 0
.....................................................................AGGAGGAAAGCTAGGACCAC................................................................................. 20 1 1 7.00 7 7 0 0 0 0
............................................................................................................GTGAGCCCATAGCGACGGA........................................... 19 0 1 7.00 7 7 0 0 0 0
..................................................................TCGAGGAGGAAAGATAGGAC.................................................................................... 20 1 1 7.00 7 7 0 0 0 0
........................................................................................................AGCAGTGAGCCCATAGCGA............................................... 19 0 1 6.00 6 5 0 1 0 0
..................................................................TAGAGGAGGAAAGATAGG...................................................................................... 18 0 1 6.00 6 6 0 0 0 0
..................................................................TAGAGGAGGAAAGATAGGACC................................................................................... 21 0 1 6.00 6 4 0 0 0 2
.....................................................................AGGAGGAAAGATAGGACCACG................................................................................ 21 0 1 6.00 6 6 0 0 0 0
................................................................CTTAGAGGAGGAAAGATAGGA..................................................................................... 21 0 1 6.00 6 6 0 0 0 0
.....................................................................AGGAGGAAAGATAGGACCAC................................................................................. 20 0 1 6.00 6 6 0 0 0 0
.............................................................................................................TGAGCCCATAGCGACGGAGC......................................... 20 0 1 6.00 6 6 0 0 0 0
.................................................................................................CAATGACAGCAGTGAGCCCA..................................................... 20 0 1 4.00 4 4 0 0 0 0
.....................................................................................................GACAGCAGTGAGCCCATAGCG................................................ 21 0 1 4.00 4 4 0 0 0 0
............................................................................................................GTGAGCCCATAGCGACGGAGCC........................................ 22 0 1 4.00 4 4 0 0 0 0
.........................................................................................................GCAGTGAGCCCATAGCGACG............................................. 20 0 1 4.00 4 4 0 0 0 0
.............................................................................................................................................CGAACTGTCTGGGGCATTT.......... 19 2 2 4.00 8 8 0 0 0 0
.............................................................................................................................................CGAACTGTCTGGGGCATA........... 18 0 1 3.00 3 3 0 0 0 0
...........................................................................................................................................GACGAACTGTCTGGGGCATA........... 20 0 1 3.00 3 3 0 0 0 0
...................................................................................................................CATAGCGACGGAGCCTTACCA.................................. 21 0 1 3.00 3 3 0 0 0 0
........................................................................................................AGCAGTGAGCCCATAGCGT............................................... 19 1 1 3.00 3 3 0 0 0 0
....................................................................GAGGAGGAAAGATAGGACCA.................................................................................. 20 0 1 3.00 3 3 0 0 0 0
....................................................................GAGGAGGAAAGATAGGACCACG................................................................................ 22 0 1 3.00 3 2 1 0 0 0
.................................................................TTAGAGGAGGAAAGATAGGA..................................................................................... 20 0 1 3.00 3 3 0 0 0 0
.................................................................TTAGAGGAGGAAAGATAGG...................................................................................... 19 0 1 3.00 3 3 0 0 0 0
..........................................................TTTTCTCTTAGAGGAGGAAAGA.......................................................................................... 22 0 1 2.00 2 2 0 0 0 0
................................................................................................GCAATGACAGCAGTGAGCCCA..................................................... 21 0 1 2.00 2 1 1 0 0 0
..............................................................................GATAGGACCACGCAAATTGCA....................................................................... 21 0 1 2.00 2 2 0 0 0 0
........................................................................................................AGCAGTGAGCCCATAGCGACGT............................................ 22 1 1 2.00 2 2 0 0 0 0
..................................................................TCGAGGAGGAAAGATAGGA..................................................................................... 19 1 1 2.00 2 2 0 0 0 0
.............................................................................................................................................CGAACTGTCTGGGGCATACGTT....... 22 2 1 2.00 2 2 0 0 0 0
...........................................................................................................AGTGAGCCCATAGCGACGGAG.......................................... 21 0 1 2.00 2 2 0 0 0 0
...................................................................CGAGGAGGAAAGATAGGACCA.................................................................................. 21 1 1 2.00 2 2 0 0 0 0
......................................................................................................ACAGCAGTGAGCCCATAGCGTT.............................................. 22 2 1 2.00 2 2 0 0 0 0
.........................................................................................................GCAGTGAGCCCATAGCGACGGA........................................... 22 0 1 2.00 2 2 0 0 0 0
..................................................................TAGAGGAGGAAAGATACGACTC.................................................................................. 22 3 1 2.00 2 2 0 0 0 0
.......................................................................................................................GCGACGGAGCCTTACCACCG............................... 20 1 1 2.00 2 2 0 0 0 0
........................................................................................................AGCAGTGAGCCCATAGCGTTT............................................. 21 3 1 2.00 2 2 0 0 0 0
..........................................................................................................CAGTGAGCCCATAGCGACGG............................................ 20 0 1 2.00 2 2 0 0 0 0
.................................................................................................CAATGACAGCAGTGAGCCCATA................................................... 22 0 1 2.00 2 2 0 0 0 0
.............................................................................................................TGAGCCCATAGCGACGGAG.......................................... 19 0 1 2.00 2 2 0 0 0 0
......................................................................................................ACAGCAGTGAGCCCATAGCG................................................ 20 0 1 2.00 2 2 0 0 0 0
..............................................................................................TTGCAATGACAGCAGTGAGCC....................................................... 21 0 1 2.00 2 2 0 0 0 0
............................................................................................................GTGAGCCCATAGCGACGGAGCCT....................................... 23 0 1 2.00 2 2 0 0 0 0
..............................................................CTCTTAGAGGAGGAAAGATAG....................................................................................... 21 0 1 2.00 2 2 0 0 0 0
................................................................CTTAGAGGAGGAAAGATAGG...................................................................................... 20 0 1 2.00 2 2 0 0 0 0
..................................................................TAGAGGAGGAAAGATAGGACCA.................................................................................. 22 0 1 2.00 2 2 0 0 0 0
...........................................................................................................AGTGAGCCCATAGCGACGGA........................................... 20 0 1 2.00 2 2 0 0 0 0
..............................................................CTCTTAGAGGAGGAAAGATA........................................................................................ 20 0 1 2.00 2 2 0 0 0 0
...................................................................CGAGGAGGAAAGATAGGACC................................................................................... 20 1 1 2.00 2 2 0 0 0 0
............................................................................................................................................ACGAACTGTCTGGGGCATAC.......... 20 0 1 2.00 2 2 0 0 0 0
....................................................................GAGGAGGAGAGATAGGACC................................................................................... 19 1 1 2.00 2 2 0 0 0 0
...................................................................AGAGGAGGAAAGATAGGACC................................................................................... 20 0 1 2.00 2 2 0 0 0 0
........................................................................................................AGCAGTGAGCCCATAGCGACGTT........................................... 23 2 1 2.00 2 2 0 0 0 0
............................................................................................................GTGAGCCCATAGCGACGGAGT......................................... 21 1 1 2.00 2 2 0 0 0 0
............................................................................................................................................ACGAACTGTCTGGGGCATA........... 19 0 1 2.00 2 2 0 0 0 0
........................................................................................................AGCAGTGAGCCCATAGCGTT.............................................. 20 2 1 2.00 2 1 0 1 0 0
..............................................................................................................GAGCCCATAGCGACGGAGCC........................................ 20 0 1 2.00 2 2 0 0 0 0
..............................................................................................................................................GAACTGTCTGGGGCATACGG........ 20 0 1 2.00 2 1 1 0 0 0
..........................................CTCACGCAGTACAAGAGTTTCT.......................................................................................................... 22 2 2 1.00 2 2 0 0 0 0
.............................................................................................................................................CCAACTGTCTGGGGCATACGG........ 21 1 1 1.00 1 1 0 0 0 0
...............................................................................................TGCAATGACAGCGGTGAGCCCA..................................................... 22 1 1 1.00 1 1 0 0 0 0
.............................................................................................................................................CGAACTGTCTGGGGCATACGGTT...... 23 2 1 1.00 1 1 0 0 0 0
.....................................................................................CCACGCAAATTGCAATGACAGT............................................................... 22 1 1 1.00 1 0 0 1 0 0
.....................................................CAAAATTTTCTCTTAGAGGAG................................................................................................ 21 0 1 1.00 1 0 1 0 0 0
..................................................................TCGAGGAGGGAAGATAGGAC.................................................................................... 20 2 1 1.00 1 1 0 0 0 0
...................................................................CGAGGAGGAAAGATAGGACCAA................................................................................. 22 2 1 1.00 1 1 0 0 0 0
..............................................................................................................GAGCCCATAGCGACGGAGCCTC...................................... 22 1 1 1.00 1 1 0 0 0 0
...........................................................................................................AGTGAGCCCATAGCGACGGAGA......................................... 22 1 1 1.00 1 1 0 0 0 0
..........................................................................GAAAGATAGGACCACGCAAA............................................................................ 20 0 1 1.00 1 1 0 0 0 0
......................................................AAAATTTTCTCTTAGAGGAGG............................................................................................... 21 0 1 1.00 1 1 0 0 0 0
............................................................................................................GTGAGACCATAGCGACGGAG.......................................... 20 1 1 1.00 1 1 0 0 0 0
...........................................................................................................AGTGAGCCCATAGCGACGG............................................ 19 0 1 1.00 1 1 0 0 0 0
..................................................................................................................................................TGTCTGGGGCATACGGCAAG.... 20 0 1 1.00 1 1 0 0 0 0
................................................................................................GCAATGACAGCAGTGAGCCC...................................................... 20 0 1 1.00 1 1 0 0 0 0
..................................................................TAGAGGAGGAAAGATAGGACAA.................................................................................. 22 1 1 1.00 1 1 0 0 0 0
.................................................................CTCGAGGAGGAAAGATAGGAC.................................................................................... 21 2 3 1.00 3 3 0 0 0 0
.............................................................................................................................................CGAACTGTCCGGGGCATACGG........ 21 1 1 1.00 1 1 0 0 0 0
..................................................................TCGAGGAGGAAAGATAGGACCA.................................................................................. 22 1 1 1.00 1 1 0 0 0 0
...............................................................TCTTAGAGGAGGAAAGATA........................................................................................ 19 0 1 1.00 1 1 0 0 0 0
............................................................................................................GTGAGCCCATAGCGACGGAGCTT....................................... 23 1 1 1.00 1 1 0 0 0 0
..................................................................TCGAGGAGGAAAGATGGGACC................................................................................... 21 2 1 1.00 1 1 0 0 0 0
.....................................................................................................GACAGCAGTGAGCGCATAGCG................................................ 21 1 1 1.00 1 1 0 0 0 0
..............................................................CTCTTAGAGGAGGAAAGA.......................................................................................... 18 0 1 1.00 1 0 1 0 0 0
.........................................................................................................GCAGTGAGCCCATAGCGACGGT........................................... 22 1 1 1.00 1 1 0 0 0 0
.............................................................TCTCTTAGAGGAGGAAAGA.......................................................................................... 19 0 1 1.00 1 1 0 0 0 0
........................................................................................................AGCAGTGGGCCCATAGCGACG............................................. 21 1 1 1.00 1 1 0 0 0 0
...........................................................................................................AATGAGCCCGTAGCGACGGAG.......................................... 21 2 1 1.00 1 0 0 0 1 0
..........................................................................................CAAATTGCAATGACATCAGT............................................................ 20 1 1 1.00 1 1 0 0 0 0
............................................................................................................GTGAGCCCATAGCGACGGAC.......................................... 20 1 1 1.00 1 1 0 0 0 0
...............................................................TCTTAGAGGAGGAAAGATAGG...................................................................................... 21 0 1 1.00 1 1 0 0 0 0
..............................................................................................................GAGCCCATAGCGACGGAGCCT....................................... 21 0 1 1.00 1 1 0 0 0 0
...................................................................................................ATGACAGCAGTGAGCCCATA................................................... 20 0 1 1.00 1 1 0 0 0 0
............................................................................................................GTGAGCCCATAGCGACGGAA.......................................... 20 1 1 1.00 1 1 0 0 0 0
.........................................................................................................GCAGTGAGCCCATAGCGACGG............................................ 21 0 1 1.00 1 1 0 0 0 0
...........................................................................................................AGTGAGCCCATAGCGACGGAGC......................................... 22 0 1 1.00 1 1 0 0 0 0
........................................................AATTTTCTCTTAGAGGAGGA.............................................................................................. 20 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................................CGAACTGTCTGGGGCATACGTA....... 22 2 1 1.00 1 1 0 0 0 0
..................................................................TAGAGGTGGAAAGATAGGACC................................................................................... 21 1 1 1.00 1 1 0 0 0 0
.............................................................................................................................................CAAACTGTCTGGGGCATAC.......... 19 1 1 1.00 1 1 0 0 0 0
.............................................................................................................TGAGCCCATAGCGACGGAGCC........................................ 21 0 1 1.00 1 1 0 0 0 0
..................................................................TAGAGGAGGAAAGATAGGACCC.................................................................................. 22 1 1 1.00 1 1 0 0 0 0
...............................................................................................................AGCCCATAGCGACGGAGCCT....................................... 20 0 1 1.00 1 1 0 0 0 0
...................................................................................................ATGACAGCAGTGAGCCCAT.................................................... 19 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................................CGAACTGTCTGGGGCATACTTC....... 22 2 1 1.00 1 1 0 0 0 0
...................................................................................................................CATAGCGACGGAGCCTTTC.................................... 19 1 1 1.00 1 1 0 0 0 0
............................................................................................................GTGAGCCCATGGCGACGGAG.......................................... 20 1 1 1.00 1 1 0 0 0 0
..................................................................TAGAGCAGGAAAGATAGGACC................................................................................... 21 1 1 1.00 1 1 0 0 0 0
.....................................................................AGGAGGAAAGCTAGTACCAC................................................................................. 20 2 1 1.00 1 1 0 0 0 0
..................................................................TCGAGGAGGAAAGATAGGACT................................................................................... 21 2 1 1.00 1 1 0 0 0 0
................................................................................................GCAATGACAGCAGTGAGCCCTT.................................................... 22 1 1 1.00 1 1 0 0 0 0
...................................................................................................................................................GTCTGGGGCATACGGCAAGGTC. 22 0 1 1.00 1 1 0 0 0 0
.....................................................................................................GACAGCAGTGAGCCCATAGCGT............................................... 22 1 1 1.00 1 1 0 0 0 0
........................................................................................................AGCAGTGAGCCCATAGCGAC.............................................. 20 0 1 1.00 1 1 0 0 0 0
....................................................................................................................................................TCTGGGGCATACGGCAAGGTC. 21 0 1 1.00 1 1 0 0 0 0
.........................................................................................................GCAGTGAGCCCATAGCGACT............................................. 20 1 1 1.00 1 1 0 0 0 0
....................................................................GAGGCGGAAAGATAGGACC................................................................................... 19 1 1 1.00 1 1 0 0 0 0
............................................................................................................GTGAGCCCATAGCGACGCAG.......................................... 20 1 1 1.00 1 1 0 0 0 0
........................................................................................................AGCAGTGAGCCCATAGCGACGTTTC......................................... 25 3 1 1.00 1 1 0 0 0 0
.......................................................................GAGGAAAGATAGGACCACGCAAA............................................................................ 23 0 1 1.00 1 1 0 0 0 0
...................................................................AGAGGAGGAAAGATAGGAC.................................................................................... 19 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................................CGAACTGTCTGGGGCATACGGT....... 22 1 1 1.00 1 1 0 0 0 0
........................................................................................................AGCAGTGAGCCCATGGCGGCG............................................. 21 2 1 1.00 1 1 0 0 0 0
......................................................................................................ACAGCAGTGAGCCCATAGCGT............................................... 21 1 1 1.00 1 1 0 0 0 0
....................................................ACAAAATTTTCTCTTAGAGG.................................................................................................. 20 0 1 1.00 1 1 0 0 0 0
.......................................................................GAGGAAAGATAGGACCACG................................................................................ 19 0 1 1.00 1 1 0 0 0 0
.....................................................................AGGAGGAAAGATAGGACCA.................................................................................. 19 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................................CGAACTGTCTGGGGCATTC.......... 19 1 1 1.00 1 1 0 0 0 0
........................................................................................................AGCAGTTAGCCCATAGCGACG............................................. 21 1 1 1.00 1 1 0 0 0 0
........................................................................................................................................TTGGACGAACTGTCTGGGG............... 19 1 1 1.00 1 1 0 0 0 0
.............................................................................................................................................AGAACTGTCTGGGGCATACGG........ 21 1 1 1.00 1 1 0 0 0 0
.......................................................AAATTTTCTCTTAGAGGAGG............................................................................................... 20 0 1 1.00 1 1 0 0 0 0
........................................................................................................AGCAGTGAGCCCATAGCGACGTA........................................... 23 1 1 1.00 1 1 0 0 0 0
.....................................................................AGGAGGAAAGCTAGGACCACT................................................................................ 21 2 2 1.00 2 2 0 0 0 0
.....................................................................................................GACAGCAGTGAGCCCATAGCGACG............................................. 24 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................................CGAACTGTCTGGGGCATCC.......... 19 1 1 1.00 1 1 0 0 0 0
..............................................................CTCTTAGAGGAGGAAAGATAGGAC.................................................................................... 24 0 1 1.00 1 1 0 0 0 0
............................................................................................................................................ACGAACTGTCTGGGGCATACG......... 21 0 1 1.00 1 1 0 0 0 0
............................................................................................................GTGAGCCCATAGCGACGGAGTTT....................................... 23 2 1 1.00 1 1 0 0 0 0
.............................................................................................................................................CGAACTGTCTGGGGCATACGGTTT..... 24 3 1 1.00 1 1 0 0 0 0
..........................................................................................................CAGTGAGCCCATAGCGACGGAG.......................................... 22 0 1 1.00 1 1 0 0 0 0
............................................................................................................GTGAGCACATAGCGACGGAG.......................................... 20 1 1 1.00 1 1 0 0 0 0
........................................................................................................AGCAGTGAGCCCATAGCGACGTC........................................... 23 2 1 1.00 1 1 0 0 0 0
...................................................................................................ATGACAGCAGTGAGCCCATAG.................................................. 21 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................................CGAACTGTCTGGGGCATACGGC....... 22 0 1 1.00 1 1 0 0 0 0
.......................................................................................................CAGCAGTGAGCCCATAGCG................................................ 19 0 1 1.00 1 1 0 0 0 0
.............................................................TCTCTTAGAGGAGGAAAGAT......................................................................................... 20 0 1 1.00 1 1 0 0 0 0
...............................................................TCTTAGAGGAGGAAGGATA........................................................................................ 19 1 1 1.00 1 1 0 0 0 0
....................................................................GAGGAGGAAAGCTAGGACCAC................................................................................. 21 1 1 1.00 1 1 0 0 0 0
.............................................................................................................................................CGAACTGTCTGGGGTATACGG........ 21 1 1 1.00 1 1 0 0 0 0
.......................................................GAATTTTCTCTTAGAGGAG................................................................................................ 19 1 1 1.00 1 1 0 0 0 0
.................................................................................................CAATGACAGCAGTGAGCCC...................................................... 19 0 1 1.00 1 1 0 0 0 0
.................................................................................................................................................CTGTCTGGGGCATACGGCAA..... 20 0 1 1.00 1 0 1 0 0 0
..................................................................TCGAGGAGGAAAGATAGGACC................................................................................... 21 1 1 1.00 1 1 0 0 0 0
....................................................................GAGGAGGAAAGCTAGGACC................................................................................... 19 1 3 0.67 2 2 0 0 0 0
............AATATTCCCTGGGCTCTGC........................................................................................................................................... 19 0 2 0.50 1 0 1 0 0 0
.......................................................................AACGAAGGATAGGACCACGCAA............................................................................. 22 3 2 0.50 1 0 0 0 1 0
...............................TGTCCGATGCCCTCACGCAGTC..................................................................................................................... 22 1 2 0.50 1 0 0 0 1 0
..........................................CTCACGCAGTACAAGAATTTCTC......................................................................................................... 23 2 2 0.50 1 1 0 0 0 0
.......................................................................................................................................GTTGGACGAACTGTCTGGG................ 19 2 2 0.50 1 1 0 0 0 0
.............................................................................................................................................CGAACTGTCTGGGGCATCT.......... 19 2 2 0.50 1 1 0 0 0 0
.................................................................CTCGAGGAGGAAAGATAGGACC................................................................................... 22 2 3 0.33 1 1 0 0 0 0
.............................................................................................................................................CGAACTGTCTGGGGCATCCTC........ 21 3 3 0.33 1 1 0 0 0 0
.................................................................CTCGAGGAGGAAAGATAGGA..................................................................................... 20 2 3 0.33 1 1 0 0 0 0
.....................................................................AGGAGGAAAGCTAGGACCA.................................................................................. 19 1 3 0.33 1 1 0 0 0 0
....................................................................GAGGAGGAAAGCTAGGATC................................................................................... 19 2 5 0.20 1 1 0 0 0 0
.............................................................................................................TGAGCCCATAGCGACGGAGT......................................... 20 1 6 0.17 1 1 0 0 0 0
................................GTCCGATGCCCTCACGCA........................................................................................................................ 18 0 7 0.14 1 0 0 0 0 1
............................................AACGCAGTACATACTTTTCTC......................................................................................................... 21 3 8 0.13 1 0 0 0 1 0
...........................................................................................................................................GACGTACGGTCGGGGGCAT............ 19 3 11 0.09 1 0 0 0 1 0
....................................................CAAGAATTTTCTCTTAGAGG.................................................................................................. 20 3 12 0.08 1 1 0 0 0 0
...............................................................................................................................................CACCGCCTGGGGCATACGGC....... 20 3 12 0.08 1 0 0 0 1 0

Anti-sense strand reads

CTCGTCTAAGAGTTATAAGGGACCCGAGACGACAGGCTACGGGAGTGCGTCATGTTTTAAAAGAGAATCTCCTCCTTTCTATCCTGGTGCGTTTAACGTTACTGTCGTCACTCGGGTATCGCTGCCTCGGAATGGTGACCTGCTTGACAGACCCCGTATGCCGTTCCAGG

*****************************************************.....................((..(((((.......)))))..))...******************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V042

embryo

 M042

female body
..............................................................................................AACGTTACTGTCGTCATACGA....................................................... 21 3 5 0.20 1 1 0
................................CAGGCTACGGGAGTGCGT........................................................................................................................ 18 0 7 0.14 1 0 1
...................................ACCACGGGAGTGCGTCCTG.................................................................................................................... 19 3 20 0.05 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droPer2 scaffold_18:542855-543024 - dpe_917 candidate-rescued GAGCAGATTCTCAATATTCCCTGGGCTCTGCTGTCCGATGCCCTCACGCAGTACAA-AATTTTCTCTTAGAGGAGGAAAGATAGGACCACGCAAATTGCAATGACAGCAGTGAGCCCATAGCGACGGAGCCTTACCACTG-------GACGAACTGTCTGGGGCATACGGCAAGGTCC
dp5 XL_group1e:1656646-1656823 + dps-mir-2545b Known_mirbase GGGCAGATTCTCAATATTCCCTGGGCTCTGCTGTCCGATGCCCTCACGCAGTACAAGAATTTCCTCCTCGAGGAGGAAAGCTAGGACCACTCGAATTGCAATGCCAGCAGTGAGCCCATAGCCACGGAGCCTTACCACCGGCTGTTGGACGAACTGCCTGGGGCATACGGCAAGGTCC
droWil2 scf2_1100000004577:1906817-1906907 + ---------------------------------------------------------------------------------------CATGCTCAATGCAATGTTGCTACCGATACCATATCCACAGATTACTATCGAAGTCGTTTGAACCGTCTACGTGACCTTTCCGGCGATACAG
droVir3 scaffold_12963:11913845-11913940 - AG----------------------------------------------------------------------------------GAGCAGGCCCAGTTCAATGCCAGTTCAGAGGCCACATCCACGGAGCACTACCGCAATCAGCTCAAGAAACTGCGCGGCATATGCGGAGACGCGG
droGri2 scaffold_15126:5458359-5458425 - ---------------------------------------------------------------------------------------------------------------GAGCCTCTATCCACGGATCTATTTCTCAACAAACTGAAGAAGCTGCGCGAGTCATGCGGTGATGAGG
droAna3 scaffold_12916:7565018-7565132 - TTGAAG---------------------------------------------------------------GACGAGGGATCAGCCTCCCACGCCCAGTGCAAGGTGAGCATGGAGCCCCTGTGCACGGATCACTATCGCTGCCTGCTCAAGAAATTTCGGGTCTCCTCCGGCGATTCCG
droBip1 scf7180000396554:181516-181607 - --------------------------------------------------------------------------------------CCATGCCCAGTGCAAGGTTAGCATGGAGCCCCTGTGCACGGATCACTATCGCTGCCTGCTCAAGAAATTTCGGGACTCCTCTGGCGACTCCG
droKik1 scf7180000302389:329900-329989 - ----------------------------------------------------------------------------------------ATGCCCAGTGCAATTCCAGCACGGAGGCCCTGCCCACGGAATACTATCGCAGCCTGCTCCAAAAACTAATACAGGAGGCTGGCGATGCTG
droFic1 scf7180000454087:296608-296698 + ---------------------------------------------------------------------------------------CATGCCCAGTGCAATTCCAGCATGGAGTCGATGTCCACCGATTACTACCGCTGCCTCATCAAAAAACTACGAGACGACACTGGCGATGCTG
droEle1 scf7180000491028:771622-771703 + ------------------------------------------------------------------------------------------------TGCAATGCCAGCACGGTGCCCGAGTCCACCGATTACTTCCGCTGCCTGCTCCAAAAACTACGGGACGCCTCCGGCGAAGCCG
droRho1 scf7180000780250:3723-3813 - ---------------------------------------------------------------------------------------CATGCCCAGTGCAATGTCAGCACGGACTCCGTGCCCACCGATTACTACCGCTGCCTGCTCCAAAAACTACGGCACGCCACTGGCGACGCCT
droBia1 scf7180000302261:1313306-1313409 + GG--------------------------------------------------------------------------AAACCTCGACCCAGGTTCAGAGCAGTTCCAGCACGGAGTCTATTTCCACCGATTATTACCGCTGCCTGCTCCAAAAGCTGCGGGATGCCACCGGCGACGCCG
droTak1 scf7180000415438:111248-111329 - ------------------------------------------------------------------------------------------------TGCAATGCCAGCACAGAGTCCCTGTCCACCGATTCCTTCCGCTGTCTGCTCCAAAAGCTACGGAATGGCACCGGCGACGCCG
droEug1 scf7180000409231:169028-169119 - --------------------------------------------------------------------------------------CCATGCCCAATGCAATGCAAGTACGGAATCCGTGTCCACCGATTATTACCGTTCTCTGCTCCAAAAGCTACGTGATGCCACCGGCGACGTTG
dm3 chr2L:15263856-15263937 - ------------------------------------------------------------------------------------------------TGCACTGCCAGCACCGAGGCGATGTCCACCGAACATTACCGCTGTCTGATCCAGAAGCTGCGGGATACCAACGGCGATGCTG
droSim2 2l:14902490-14902571 - ------------------------------------------------------------------------------------------------TGCACTGCCAGCACCGAGGCGATGACCACCGATCATTACCGCTGTCTGATCCAGAAGCTGCGGGATGCCAACGGCGATGCTG
droSec2 scaffold_3:1525557-1525638 - ------------------------------------------------------------------------------------------------TGCACTGCCAGCACCGAGGCTATGACCACCGATCATTACCGCTGTCTGATCCAGAAGCTGCGGGACGCCAACGGCGATGCTG
droYak3 2L:20067037-20067118 + ------------------------------------------------------------------------------------------------TGCACTGCCAGCACCGAGCCGATCTCCACCAACCATTACCGCTGTCTGCTCCAGAAGCTGCGGGATGCCAATGGAGACGCTG
droEre2 scaffold_4929:7008708-7008799 - --------------------------------------------------------------------------------------CCATGTCCAGTGCACTGCCAGCACCGAGACGATGTCCACCGATCATTACCGCGATCTGCTCCAGAAGCTGCGGGAGGCCAATGGTGACGCTG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
GAGCAGATTCTCAATATTCCCTGGGCTCTGCTGTCCGATGCCCTCACGCAGTACAA-AATTTTCTCTTAGAGGAGGAAAGATAGGACCACGCAAATTGCAATGACAGCAGTGAGCCCATAGCGACGGAGCCTTACCACTG-------GACGAACTGTCTGGGGCATACGGCAAGGTCCSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
.............................................................................................................GTGAGCCCATAGCGACGGAG.................................................201118.0011800000118
.....................................................................GAGGAGGAAAGATAGGACC..........................................................................................19172.00720000072
...................................................................TAGAGGAGGAAAGATAGGAC...........................................................................................20148.00480100047
.........................................................................................................AGCAGTGAGCCCATAGCGACG....................................................21130.00300000129
.............................................................................................................GTGAGCCCATAGCGACGGAGC................................................21129.00290000029
.....................................................................................................................................................CGAACTGTCTGGGGCATACGG........21126.00260001025
..................................................................TTAGAGGAGGAAAGATAGGAC...........................................................................................21121.00210001020
.....................................................................................................................................................CGAACTGTCTGGGGCATACG.........20119.00190100018
...........................................................................................................CAGTGAGCCCATAGCGACGGA..................................................21115.00150000114
.....................................................................................................................................................CGAACTGTCTGGGGCATAC..........19112.00120000012
.....................................................................GAGGAGGAAAGATAGGACCAC........................................................................................21110.00100000010
.....................................................................GAGGAGGAAAGATAGGAC...........................................................................................1818.008000008
...................................................................TAGAGGAGGAAAGATAGGA............................................................................................1917.007000007
.............................................................................................................GTGAGCCCATAGCGACGGA..................................................1917.007000007
.........................................................................................................AGCAGTGAGCCCATAGCGA......................................................1916.006000105
...................................................................TAGAGGAGGAAAGATAGG.............................................................................................1816.006000006
...................................................................TAGAGGAGGAAAGATAGGACC..........................................................................................2116.006200004
......................................................................AGGAGGAAAGATAGGACCACG.......................................................................................2116.006000006
.................................................................CTTAGAGGAGGAAAGATAGGA............................................................................................2116.006000006
......................................................................AGGAGGAAAGATAGGACCAC........................................................................................2016.006000006
..............................................................................................................TGAGCCCATAGCGACGGAGC................................................2016.006000006
..................................................................................................CAATGACAGCAGTGAGCCCA............................................................2014.004000004
......................................................................................................GACAGCAGTGAGCCCATAGCG.......................................................2114.004000004
.............................................................................................................GTGAGCCCATAGCGACGGAGCC...............................................2214.004000004
..........................................................................................................GCAGTGAGCCCATAGCGACG....................................................2014.004000004
.....................................................................................................................................................CGAACTGTCTGGGGCATTT..........1924.008000008
.....................................................................................................................................................CGAACTGTCTGGGGCATA...........1813.003000003
...................................................................................................................................................GACGAACTGTCTGGGGCATA...........2013.003000003
....................................................................................................................CATAGCGACGGAGCCTTACCA.........................................2113.003000003
.........................................................................................................AGCAGTGAGCCCATAGCGT......................................................1913.003000003
.....................................................................GAGGAGGAAAGATAGGACCA.........................................................................................2013.003000003
.....................................................................GAGGAGGAAAGATAGGACCACG.......................................................................................2213.003010002
..................................................................TTAGAGGAGGAAAGATAGGA............................................................................................2013.003000003
..................................................................TTAGAGGAGGAAAGATAGG.............................................................................................1913.003000003
...........................................................TTTTCTCTTAGAGGAGGAAAGA.................................................................................................2212.002000002
.................................................................................................GCAATGACAGCAGTGAGCCCA............................................................2112.002010001
...............................................................................GATAGGACCACGCAAATTGCA..............................................................................2112.002000002
.........................................................................................................AGCAGTGAGCCCATAGCGACGT...................................................2212.002000002
.....................................................................................................................................................CGAACTGTCTGGGGCATACGTT.......2212.002000002
............................................................................................................AGTGAGCCCATAGCGACGGAG.................................................2112.002000002
.......................................................................................................ACAGCAGTGAGCCCATAGCGTT.....................................................2212.002000002
..........................................................................................................GCAGTGAGCCCATAGCGACGGA..................................................2212.002000002
.........................................................................................................AGCAGTGAGCCCATAGCGTTT....................................................2112.002000002
...........................................................................................................CAGTGAGCCCATAGCGACGG...................................................2012.002000002
..................................................................................................CAATGACAGCAGTGAGCCCATA..........................................................2212.002000002
..............................................................................................................TGAGCCCATAGCGACGGAG.................................................1912.002000002
.......................................................................................................ACAGCAGTGAGCCCATAGCG.......................................................2012.002000002
...............................................................................................TTGCAATGACAGCAGTGAGCC..............................................................2112.002000002
.............................................................................................................GTGAGCCCATAGCGACGGAGCCT..............................................2312.002000002
...............................................................CTCTTAGAGGAGGAAAGATAG..............................................................................................2112.002000002
.................................................................CTTAGAGGAGGAAAGATAGG.............................................................................................2012.002000002
...................................................................TAGAGGAGGAAAGATAGGACCA.........................................................................................2212.002000002
............................................................................................................AGTGAGCCCATAGCGACGGA..................................................2012.002000002
...............................................................CTCTTAGAGGAGGAAAGATA...............................................................................................2012.002000002
....................................................................................................................................................ACGAACTGTCTGGGGCATAC..........2012.002000002
....................................................................AGAGGAGGAAAGATAGGACC..........................................................................................2012.002000002
.........................................................................................................AGCAGTGAGCCCATAGCGACGTT..................................................2312.002000002
.............................................................................................................GTGAGCCCATAGCGACGGAGT................................................2112.002000002
....................................................................................................................................................ACGAACTGTCTGGGGCATA...........1912.002000002
.........................................................................................................AGCAGTGAGCCCATAGCGTT.....................................................2012.002000101
...............................................................................................................GAGCCCATAGCGACGGAGCC...............................................2012.002000002
......................................................................................................................................................GAACTGTCTGGGGCATACGG........2012.002010001
.....................................................................................................................................................CGAACTGTCTGGGGCATACGGTT......2311.001000001
......................................................................................CCACGCAAATTGCAATGACAGT......................................................................2211.001000100
.....................................................CAA-AATTTTCTCTTAGAGGAG.......................................................................................................2111.001010000
...............................................................................................................GAGCCCATAGCGACGGAGCCTC.............................................2211.001000001
............................................................................................................AGTGAGCCCATAGCGACGGAGA................................................2211.001000001
...........................................................................GAAAGATAGGACCACGCAAA...................................................................................2011.001000001
......................................................AA-AATTTTCTCTTAGAGGAGG......................................................................................................2111.001000001
............................................................................................................AGTGAGCCCATAGCGACGG...................................................1911.001000001
..........................................................................................................................................................TGTCTGGGGCATACGGCAAG....2011.001000001
.................................................................................................GCAATGACAGCAGTGAGCCC.............................................................2011.001000001
................................................................TCTTAGAGGAGGAAAGATA...............................................................................................1911.001000001
...............................................................CTCTTAGAGGAGGAAAGA.................................................................................................1811.001010000
..........................................................................................................GCAGTGAGCCCATAGCGACGGT..................................................2211.001000001
..............................................................TCTCTTAGAGGAGGAAAGA.................................................................................................1911.001000001
.............................................................................................................GTGAGCCCATAGCGACGGAC.................................................2011.001000001
................................................................TCTTAGAGGAGGAAAGATAGG.............................................................................................2111.001000001
...............................................................................................................GAGCCCATAGCGACGGAGCCT..............................................2111.001000001
....................................................................................................ATGACAGCAGTGAGCCCATA..........................................................2011.001000001
.............................................................................................................GTGAGCCCATAGCGACGGAA.................................................2011.001000001
..........................................................................................................GCAGTGAGCCCATAGCGACGG...................................................2111.001000001
............................................................................................................AGTGAGCCCATAGCGACGGAGC................................................2211.001000001
.........................................................AATTTTCTCTTAGAGGAGGA.....................................................................................................2011.001000001
.....................................................................................................................................................CGAACTGTCTGGGGCATACGTA.......2211.001000001
..............................................................................................................TGAGCCCATAGCGACGGAGCC...............................................2111.001000001
...................................................................TAGAGGAGGAAAGATAGGACCC.........................................................................................2211.001000001
................................................................................................................AGCCCATAGCGACGGAGCCT..............................................2011.001000001
....................................................................................................ATGACAGCAGTGAGCCCAT...........................................................1911.001000001
...........................................................................................................................................................GTCTGGGGCATACGGCAAGGTC.2211.001000001
......................................................................................................GACAGCAGTGAGCCCATAGCGT......................................................2211.001000001
.........................................................................................................AGCAGTGAGCCCATAGCGAC.....................................................2011.001000001
............................................................................................................................................................TCTGGGGCATACGGCAAGGTC.2111.001000001
..........................................................................................................GCAGTGAGCCCATAGCGACT....................................................2011.001000001
........................................................................GAGGAAAGATAGGACCACGCAAA...................................................................................2311.001000001
....................................................................AGAGGAGGAAAGATAGGAC...........................................................................................1911.001000001
.....................................................................................................................................................CGAACTGTCTGGGGCATACGGT.......2211.001000001
.......................................................................................................ACAGCAGTGAGCCCATAGCGT......................................................2111.001000001
....................................................ACAA-AATTTTCTCTTAGAGG.........................................................................................................2011.001000001
........................................................................GAGGAAAGATAGGACCACG.......................................................................................1911.001000001
......................................................................AGGAGGAAAGATAGGACCA.........................................................................................1911.001000001
.......................................................A-AATTTTCTCTTAGAGGAGG......................................................................................................2011.001000001
......................................................................................................GACAGCAGTGAGCCCATAGCGACG....................................................2411.001000001
...............................................................CTCTTAGAGGAGGAAAGATAGGAC...........................................................................................2411.001000001
....................................................................................................................................................ACGAACTGTCTGGGGCATACG.........2111.001000001
.....................................................................................................................................................CGAACTGTCTGGGGCATACGGTTT.....2411.001000001
...........................................................................................................CAGTGAGCCCATAGCGACGGAG.................................................2211.001000001
.........................................................................................................AGCAGTGAGCCCATAGCGACGTC..................................................2311.001000001
....................................................................................................ATGACAGCAGTGAGCCCATAG.........................................................2111.001000001
.....................................................................................................................................................CGAACTGTCTGGGGCATACGGC.......2211.001000001
........................................................................................................CAGCAGTGAGCCCATAGCG.......................................................1911.001000001
..............................................................TCTCTTAGAGGAGGAAAGAT................................................................................................2011.001000001
..................................................................................................CAATGACAGCAGTGAGCCC.............................................................1911.001000001
.........................................................................................................................................................CTGTCTGGGGCATACGGCAA.....2011.001010000
............AATATTCCCTGGGCTCTGC...................................................................................................................................................1920.501010000
...............................TGTCCGATGCCCTCACGCAGTC.............................................................................................................................2220.501000010
.....................................................................................................................................................CGAACTGTCTGGGGCATCT..........1920.501000001
..............................................................................................................TGAGCCCATAGCGACGGAGT................................................2060.171000001
................................GTCCGATGCCCTCACGCA................................................................................................................................1870.141100000
dp5
GGGCAGATTCTCAATATTCCCTGGGCTCTGCTGTCCGATGCCCTCACGCAGTACAAGAATTTCCTCCTCGAGGAGGAAAGCTAGGACCACTCGAATTGCAATGCCAGCAGTGAGCCCATAGCCACGGAGCCTTACCACCGGCTGTTGGACGAACTGCCTGGGGCATACGGCAAGGTCCSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
.....................................................................................................................................................CGAACTGCCTGGGGCATACGG........2111467.0014670501000714522
.....................................................................................................................................................CGAACTGCCTGGGGCATACG.........202205.004100160102103882
....................................................................................................................................................ACGAACTGCCTGGGGCATACG.........212149.50299000000322931
..........................................CTCACGCAGTACAAGAATTTC...................................................................................................................218122.88983119704502825004602
...................................................................................................................................................GACGAACTGCCTGGGGCATAC..........21266.00132210000001281
....................................................................................................................................................ACGAACTGCCTGGGGCATACGG........22124.002400000000240
...................................................................TCGAGGAGGAAAGCTAGGAC...........................................................................................20819.5015630120104611020
.........................................................................................................AGCAGTGAGCCCATAGCCACG....................................................21218.003602700024030
...................................................................TCGAGGAGGAAAGCTAGGACC..........................................................................................21817.5014016931301100160
......................................................................AGGAGGAAAGCTAGGACCAC........................................................................................20616.5099730003190670
.....................................................................................................................................................CGAACTGCCTGGGGCATACGT........21216.003202000005250
...................................................................................................................................................GACGAACTGCCTGGGGCATACG.........22214.502900000000290
....................................................................................................................................................ACGAACTGCCTGGGGCATAC..........20213.002600000000260
....................................................................................................................CATAGCCACGGAGCCTTACC..........................................20211.002201701013000
................................................................................................................................................TTGGACGAACTGCCTGGGGCA.............21211.002211000010190
....................................................................................................................CATAGCCACGGAGCCTTACCA.........................................2129.501901400023000
.....................................................................................................................................................CGAACTGCCTGGGGCATAC..........1929.001801601000010
................................................................................................................................................TTGGACGAACTGCCTGGGGC..............2029.001803000000150
..........................................CTCACGCAGTACAAGAATTT....................................................................................................................2087.8863090102190320
...............................................................................................................................................GTTGGACGAACTGCCTGGGGC..............2127.501521200001000
..........................................................................................................GCAGTGAGCCCATAGCCACGG...................................................2126.501301100000020
..............................................................................AGCTAGGACCACTCGAATTGC...............................................................................2166.003610000000350
....................................................................CGAGGAGGAAAGCTAGGACC..........................................................................................2085.634543810002000
.............................................................................................................GTGAGCCCATAGCCACGGAGC................................................2125.501101100000000
.........................................................................................................AGCAGTGAGCCCATAGCCAC.....................................................2025.50110503012000
........................................................................................................CAGCAGTGAGCCCATAGCCAC.....................................................2125.50110600003020
..................................................................CTCGAGGAGGAAAGCTAGGAC...........................................................................................2185.3843811000010230
...........................................TCACGCAGTACAAGAATTTCC..................................................................................................................2185.2542213010070190
...........................................TCACGCAGTACAAGAATTTC...................................................................................................................2085.13410150100130120
............................................................................................................................................GCTGTTGGACGAACTGCCTGG.................2125.00100500000050
................................................................................................................................................TTGGACGAACTGCCTGGGGCATACGG........2615.0050000000050
..................................................................................................................................................GGACGAACTGCCTGGGGCATA...........2125.001001000000000
.......................................................................................................CCAGCAGTGAGCCCATAGCC.......................................................2025.00100102001060
......................................................................................................................................................GAACTGCCTGGGGCATACGG........2015.0050000000050
................................................................................................................................................TTGGACGAACTGCCTGGGG...............1925.00100100000090
..................................................................................................................................CTTACCACCGGCTGTTGGACG...........................2124.5090700002000
...............................................................................................................................AGCCTTACCACCGGCTGTTGGA.............................2224.5090900000000
......................................................................................................................................CCACCGGCTGTTGGACGAACTG......................2224.5090600003000
................................................................................................................................................TTGGACGAACTGCCTGGGGCATAC..........2424.5090000000090
..........................................CTCACGCAGTACAAGAATTTCC..................................................................................................................2284.253406030050200
.....................................................................................................................................................CGAACTGCCTGGGGCATACGGT.......2214.0040000000040
......................................................................................................................................CCACCGGCTGTTGGACGAAC........................2024.0080400004000
....................................................................CGAGGAGGAAAGCTAGGAC...........................................................................................1984.003286000030150
......................................................................................CCACTCGAATTGCAATGCCAG.......................................................................2163.83230700044071
.............................................................................................................................................CTGTTGGACGAACTGCCTGGG................2123.5070000000070
................................................................................................................................GCCTTACCACCGGCTGTTGGA.............................2123.5070601000000
..................................................................................................................................................GGACGAACTGCCTGGGGCAT............2023.5070700000000
...............................................................CTCCTCGAGGAGGAAAGCTAG..............................................................................................2183.132505000200180
...............................................................CTCCTCGAGGAGGAAAGCTAGG.............................................................................................2283.132501000060180
.......................................................................................................CCAGCAGTGAGCCCATAGC........................................................1923.0060000001050
.....................................................................................................................................................CGAACTGCCTGGGGCATACGGA.......2213.0030000001110
.................................................................................................................................................TGGACGAACTGCCTGGGGCATACGG........2513.0030000000030
...............................................................................................................................................GTTGGACGAACTGCCTGGGG...............2023.0060600000000
..................................................................................................................................................GGACGAACTGCCTGGGGCA.............1923.0060600000000
..............................................................................................................................GAGCCTTACCACCGGCTGTTGG..............................2223.0060600000000
...............................................................................................................................AGCCTTACCACCGGCTGTTGG..............................2123.0060600000000
................................................................................................................................GCCTTACCACCGGCTGTTGG..............................2023.0060600000000
.....................................................................................................................................................CGAACTGCCTGGGGCATACGGTTT.....2413.0030000000030
...................................................................................................................................................GACGAACTGCCTGGGGCATA...........2023.0060200000040
......................................................................................................................................................GAACTGCCTGGGGCATACG.........1922.5050400000010
....................................................................................................................CATAGCCACGGAGCCTTAC...........................................1922.5050400010000
...............................................................................................................................AGCCTTACCACCGGCTGTTG...............................2022.5050500000000
..............................................................................................................TGAGCCCATAGCCACGGAGC................................................2022.5050500000000
..............................................................................................................................................TGTTGGACGAACTGCCTGGG................2022.5050100000040
....................................................................................................................................................ACGAACTGCCTGGGGCATA...........1922.5050200000030
.......................................................................................................................................CACCGGCTGTTGGACGAACTG......................2122.5050500000000
................................................................................................................................................TTGGACGAACTGCCTGGGGCATACG.........2522.5050000000050
.................................TCCGATGCCCTCACGCAGTAC............................................................................................................................2172.291601400010010
............................................CACGCAGTACAAGAATTTCC..................................................................................................................2082.25182200023090
....................................................................CGAGGAGGAAAGCTAGGACCA.........................................................................................2182.131701300002020
.....................................................................................................................................................CGAACTGCCTGGGGCATACT.........2022.0040100000030
..............................................................................................................................................................TGGGGCATACGGCAAGGTC.1912.0020000001010
..........................................................................................................GCAGTGAGCCCATAGCCACG....................................................2022.0040200020000
........................................................................................................CAGCAGTGAGCCCATAGCCA......................................................2022.0040400000000
..............................................................................................................................................................TGGGGCATACGGCAAGGTCC2012.0020000002000
..........................................................................................................................................................TGCCTGGGGCATACGGCAAG....2012.0020100010000
..................................................................................................................................CTTACCACCGGCTGTTGGAC............................2022.0040300001000
.....................................................................................................TGCCAGCAGTGAGCCCATAG.........................................................2022.0040200000020
...................................................................................................................................................GACGAACTGCCTGGGGCATACGG........2312.0020000000020
.................................................AGTACAAGAATTTCCTCCTCG............................................................................................................2181.88150200005080
..................................................................CTCGAGGAGGAAAGCTAGGA............................................................................................2081.88152600001060
...................................................................TCGAGGAGGAAAGCTAGG.............................................................................................1881.881501000010130
...............................................................................GCTAGGACCACTCGAATTGC...............................................................................2061.831100000000110
................................................................................CTAGGACCACTCGAATTGCAA.............................................................................2161.671000000000100
...............................TGTCCGATGCCCTCACGCAGTA.............................................................................................................................2271.571101100000000
...............................................................................................................................................GTTGGACGAACTGCCTGGG................1921.5031200000000
...................................................................................................................................................GACGAACTGCCTGGGGCATACC.........2221.5030000000030
.......................................................................................................................AGCCACGGAGCCTTACCACC.......................................2021.5030300000000
.....................................................................................................................ATAGCCACGGAGCCTTACC..........................................1921.5030300000000
..................................................................................................CAATGCCAGCAGTGAGCCCAT...........................................................2121.5030200000010
.................................................................................................................................CCTTACCACCGGCTGTTGGAC............................2121.5030100002000
..............................................................................................................................................TGTTGGACGAACTGCCTGGGG...............2121.5030000000030
.....................................................................................................TGCCAGCAGTGAGCCCATAGC........................................................2121.5030200000010
.....................................................................................................................ATAGCCACGGAGCCTTACCA.........................................2021.5030200001000
.....................................................................................................................................................CGAACTGCCTGGGGCATACGTT.......2221.5030000000030
...............................................................................................................................................GTTGGACGAACTGCCTGGGGT..............2121.5030300000000
....................................................................................................................................TACCACCGGCTGTTGGACGA..........................2021.5030300000000
.................................................................................................GCAATGCCAGCAGTGAGCCC.............................................................2021.5030201000000
......................................................................................................................................CCACCGGCTGTTGGACGAA.........................1921.5030200001000
.....................................................CAAGAATTTCCTCCTCGAGGA........................................................................................................2181.381101000001000
...................................................................TCGAGGAGGAAAGCTAGGA............................................................................................1981.38110200003060
.....................................................................GAGGAGGAAAGCTAGGACC..........................................................................................1981.38111300003040
......................................................................AGGAGGAAAGCTAGGACCACT.......................................................................................2161.3380501001010
................................................................................CTAGGACCACTCGAATTGCAATGCC.........................................................................2561.3380000000080
.............................................................................AAGCTAGGACCACTCGAATTG................................................................................2161.1771300001020
................................................................................CTAGGACCACTCGAATTGCAATGC..........................................................................2461.1770000000250
.................................TCCGATGCCCTCACGCAGTACA...........................................................................................................................2271.1480800000000
.............................................................................................................................................CTGTTGGACGAACTGCCTGG.................2021.0020000000020
................................................................................................................................................TTGGACGAACTGCCTGGGGCATT...........2321.0020000000020
............................................................................................................AGTGAGCCCATAGCCACGGAG.................................................2121.0020200000000
.............................................................................................................................................................CTGGGGCATACGGCAAGGTCC2111.0010000001000
...............................................................................................................................................GTTGGACGAACTGCCTGGGGCATAC..........2521.0020000000020
..........................................CTCACGCAGTACAAGAATTTCA..................................................................................................................2281.0080300001040
....................................................................................................................................................ACGAACTGCCTGGGGCATACGTTT......2421.0020000000020
......................................................................................................................................CCACCGGCTGTTGGACGAACT.......................2121.0020200000000
...........................................................................................................................................GGCTGTTGGACGAACTGCCTGG.................2221.0020200000000
................................................................................CTAGGACCACTCGAATTGC...............................................................................1961.0060000000060
....................................................................................................................................................ACGAACTGCCTGGGGCATAA..........2021.0020000000020
......................................................................................................GCCAGCAGTGAGCCCATAG.........................................................1921.0020200000000
...............................................................................................................................AGCCTTACCACCGGCTGTTGGAC............................2321.0020200000000
..............................................................................................................................................TGTTGGACGAACTGCCTGG.................1921.0020000000020
.......................................................................................................................................................AACTGCCTGGGGCATACGG........1911.0010000000010
..............................................................................................................................GAGCCTTACCACCGGCTGTTGGA.............................2321.0020200000000
.....................................................................................................................................................CGAACTGCCTGGGGCATACGGCAAGG...2611.0010000000010
...................................................................TCGAGGAGGAAAGCTAGGACCA.........................................................................................2281.0080500001200
............................................................................................................................................................CCTGGGGCATACGGCAAGG...1911.0010000000010
..............................................................................AGCTAGGACCACTCGAATTG................................................................................2061.0061100000040
.............................................................................................................................................................CTGGGGCATACGGCAAGGTC.2011.0010000000010
........................................................................................................CAGCAGTGAGCCCATAGCC.......................................................1921.0020200000000
................................................................................................................................GCCTTACCACCGGCTGTTG...............................1921.0020200000000
.....................................................................................................................................................CGAACTGCCTGGGGCATACGGGTT.....2411.0010000000010
....................................................................................................................................................ACGAACTGCCTGGGGCATACGT........2221.0020000000020
............................................................................................................................................................CCTGGGGCATACGGCAAGGTC.2111.0010000000010
..................................................................................................CAATGCCAGCAGTGAGCCC.............................................................1921.0020100010000
..........................................................................................................................................................TGCCTGGGGCATACGG........1611.0010000000010
.....................................................................................ACCACTCGAATTGCAATGC..........................................................................1961.0060000000060
...............................................................................................................................................................GGGGCATACGGCAAGGTCC1911.0010000000010
................................................................................................................................................TTGGACGAACTGCCTGGG................1821.0020000000020
.....................................................................................................................ATAGCCACGGAGCCTTAC...........................................1821.0020200000000
........................................................................................................................GCCACGGAGCCTTACCACCGG.....................................2121.0020100000010
............................................................................................................................................GCTGTTGGACGAACTGCCTG..................2021.0020000000020
................................................................................................................................................TTGGACGAACTGCCTGGGGCAT............2221.0020000001010
.....................................................................................................................ATAGCCACGGAGCCTTACCAC........................................2121.0020200000000
...............................................................................................................................................GTTGGACGAACTGCCTGG.................1821.0020200000000
...................................................................................................................................TTACCACCGGCTGTTGGACGA..........................2121.0020200000000
.........................................................................................................................................................CTGCCTGGGGCATACGGCAAG....2111.0010000000010
..............................................................................................................TGAGCCCATAGCCACGGAGCC...............................................2121.0021100000000
.............................................................................................................GTGAGCCCATAGCCACGGAG.................................................2021.0020200000000
.....................................................................................................................................................CGAACTGCCTGGGGCATACGTTT......2321.0020000000020
....................................................................................................................................................ACGAACTGCCTGGGGCATACGGCAAG....2611.0010000000010
.................................................................................................GCAATGCCAGCAGTGAGCC..............................................................1921.0020200000000
................................................................................................................................................TTGGACGAACTGCCTGGGGCATACGGCAA.....2911.0010000000010
.....................................................................................................................................................CGAACTGCCTGGGGCATACGGCAA.....2411.0010000000010
................................................................TCCTCGAGGAGGAAAGCTAGG.............................................................................................2181.0080300001040
.................................TCCGATGCCCTCACGCAGTA.............................................................................................................................2070.8660600000000
.....................................................................GAGGAGGAAAGCTAGGACCAC........................................................................................2160.8351000001030
................................................................................CTAGGACCACTCGAATTGCAATG...........................................................................2360.8350000000050
.....................................................................................ACCACTCGAATTGCAATGCCAG.......................................................................2260.8350300000020
.....................................................................GAGGAGGAAAGCTAGGAC...........................................................................................1880.7561200000030
..........................................CTCACGCAGTACAAGAATTTCT..................................................................................................................2280.7560000000060
.....................................................................................ACCACTCGAATTGCAATGCC.........................................................................2060.6740202000000
.................................................................................TAGGACCACTCGAATTGCAATG...........................................................................2260.6740000000220
..................................................................CTCGAGGAGGAAAGCTAGG.............................................................................................1980.6350100002020
.................................................AGTACAAGAATTTCCTCCTC.............................................................................................................2080.6350001000040
................................................CAGTACAAGAATTTCCTCCTC.............................................................................................................2180.6350300000020
.........................................................................................................AGCAGTGAGCCCATAGCCA......................................................1920.5010000000010
...................................................................................................................................................GACGAACTGCCTGGGGCATT...........2020.5010000000010
.......................................................................................CACTCGAATTGCAATGCCAGC......................................................................2160.5030101001000
.....................................................................................................TGCCAGCAGTGAGCCCATA..........................................................1920.5010100000000
.......................................................................................................................AGCCACGGAGCCTTACCACCGGCT...................................2420.5010100000000
.....................................................................................................................................................CGAACTGCCTGGGGCATACGC........2120.5010000000010
..................................................................................................................................CTTACCACCGGCTGTTGGACGA..........................2220.5010100000000
......................................................................AGGAGGAAAGCTAGGACCA.........................................................................................1980.5040000004000
............................................................................................................................................GCTGTTGGACGAACTGCCTGGGGCATACG.........2920.5010000000010
......................................................................................................GCCAGCAGTGAGCCCATAGC........................................................2020.5010100000000
................................................................................................TGCAATGCCAGCAGTGAGCCC.............................................................2120.5010100000000
................................................................................................................................................TTGGACGAACTGCCTGGGGCATATC.........2520.5010000000010
................................................................................................TGCAATGCCAGCAGTGAGCC..............................................................2020.5010100000000
...................................................................................................................................................GACGAACTGCCTGGGGCA.............1820.5010100000000
..................................................................................................................................................GGACGAACTGCCTGGGGCATT...........2120.5010100000000
..................................................................................................................................................GGACGAACTGCCTGGGGCC.............1920.5011000000000
..........................................................................................................................CACGGAGCCTTACCACCGGCTT..................................2220.5010100000000
................................................................................................................................................TTGGACGAACTGCCTGGGGCATATT.........2520.5010100000000
....................................................ACAAGAATTTCCTCCTCGAGG.........................................................................................................2180.5040400000000
...............................................................................................................GAGCCCATAGCCACGGAGCCT..............................................2120.5010100000000
..............................................................................................................TGAGCCCATAGCCACGGAGCCTTA............................................2420.5010100000000
.....................................................................................ACCACTCGAATTGCAATG...........................................................................1860.5030000000030
.......................................................................................................................AGCCACGGAGCCTTACCAC........................................1920.5010100000000
....................................................................................................................................TACCACCGGCTGTTGGACGAA.........................2120.5010000001000
....................................................................................................................CATAGCCACGGAGCCTTACA..........................................2020.5010100000000
.........................................................................................................AGCAGTGAGCCCATAGCC.......................................................1820.5010100000000
......................................................................................................................................CCACCGGCTGTTGGACGA..........................1820.5011000000000
.......................................................................................................................................CACCGGCTGTTGGACGAACT.......................2020.5010100000000
............................................CACGCAGTACAAGAATTTCCT.................................................................................................................2180.5040200001010
......................................................................................................................................................GAACTGCCTGGGGCATAC..........1820.5010100000000
droWil2
---------------------------------------------------------------------------------------CATGCTCAATGCAATGTTGCTACCGATACCATATCCACAGATTACTATCGAAGTCGTTTGAACCGTCTACGTGACCTTTCCGGCGATACAGSizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
..............................................................................................................................GATTACTATCGAAGTCGTTTGAAC............................2411.00100100
.....................................................................................................................................ATCGAAGTCGTTTGAACC...........................1811.00100001
droVir3
AG----------------------------------------------------------------------------------GAGCAGGCCCAGTTCAATGCCAGTTCAGAGGCCACATCCACGGAGCACTACCGCAATCAGCTCAAGAAACTGCGCGGCATATGCGGAGACGCGGSizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
..........................................................................................................................................................TGCGCGGCATATGCGGAGACGCGG2411.0010000000000000000000010000000000000000000000000000000000000000000000000000000000
................................................................................................TTCAATGCCAGTTCAGAGGCCACATC........................................................2611.0010000000000000000000000000000010000000000000000000000000000000000000000000000000
.....................................................................................................................ACATCCACGGAGCACTACCGCAATCAG..................................2711.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................AGGCCCAGTTCAATGCCAGT......................................................................2011.0010000000000000000000000000000100000000000000000000000000000000000000000000000000
....................................................................................................................................TACCGCAATCAGCTCAAGAAACTGC.....................2511.0010000000000000000000000000000100000000000000000000000000000000000000000000000000
............................................................................................................................CGGAGCACTACCGCAATCAGCT................................2211.0010000000000000000000000000000001000000000000000000000000000000000000000000000000
........................................................................................................................TCCACGGAGCACTACCGCA.......................................1911.0010000000000000000000010000000000000000000000000000000000000000000000000000000000
.......................................................................................................................ATCCACGGAGCACTACCGCAATCAGC.................................2611.0010000000000000000000000000000100000000000000000000000000000000000000000000000000
AG----------------------------------------------------------------------------------GAGCAGGCCCAGTTCCG.............................................................................1930.3310000000000000000000100000000000000000000000000000000000000000000000000000000000
droGri2
---------------------------------------------------------------------------------------------------------------GAGCCTCTATCCACGGATCTATTTCTCAACAAACTGAAGAAGCTGCGCGAGTCATGCGGTGATGAGGSizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
..........................................................................................................................CACGGATCTATTTCTCAACA....................................2011.00110
droAna3
TTGAAG---------------------------------------------------------------GACGAGGGATCAGCCTCCCACGCCCAGTGCAAGGTGAGCATGGAGCCCCTGTGCACGGATCACTATCGCTGCCTGCTCAAGAAATTTCGGGTCTCCTCCGGCGATTCCGSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
...................................................................................................................CCCTGTGCACGGATCACTAT...........................................2011.001001000
droBip1
--------------------------------------------------------------------------------------CCATGCCCAGTGCAAGGTTAGCATGGAGCCCCTGTGCACGGATCACTATCGCTGCCTGCTCAAGAAATTTCGGGACTCCTCTGGCGACTCCGSizeHit CountTotal NormTotal
No Reads
droKik1
----------------------------------------------------------------------------------------ATGCCCAGTGCAATTCCAGCACGGAGGCCCTGCCCACGGAATACTATCGCAGCCTGCTCCAAAAACTAATACAGGAGGCTGGCGATGCTGSizeHit CountTotal NormTotal
No Reads
droFic1
---------------------------------------------------------------------------------------CATGCCCAGTGCAATTCCAGCATGGAGTCGATGTCCACCGATTACTACCGCTGCCTCATCAAAAAACTACGAGACGACACTGGCGATGCTGSizeHit CountTotal NormTotal
No Reads
droEle1
------------------------------------------------------------------------------------------------TGCAATGCCAGCACGGTGCCCGAGTCCACCGATTACTTCCGCTGCCTGCTCCAAAAACTACGGGACGCCTCCGGCGAAGCCGSizeHit CountTotal NormTotal
No Reads
droRho1
---------------------------------------------------------------------------------------CATGCCCAGTGCAATGTCAGCACGGACTCCGTGCCCACCGATTACTACCGCTGCCTGCTCCAAAAACTACGGCACGCCACTGGCGACGCCTSizeHit CountTotal NormTotal
No Reads
droBia1
GG--------------------------------------------------------------------------AAACCTCGACCCAGGTTCAGAGCAGTTCCAGCACGGAGTCTATTTCCACCGATTATTACCGCTGCCTGCTCCAAAAGCTGCGGGATGCCACCGGCGACGCCGSizeHit CountTotal NormTotal
No Reads
droTak1
------------------------------------------------------------------------------------------------TGCAATGCCAGCACAGAGTCCCTGTCCACCGATTCCTTCCGCTGTCTGCTCCAAAAGCTACGGAATGGCACCGGCGACGCCGSizeHit CountTotal NormTotal
No Reads
droEug1
--------------------------------------------------------------------------------------CCATGCCCAATGCAATGCAAGTACGGAATCCGTGTCCACCGATTATTACCGTTCTCTGCTCCAAAAGCTACGTGATGCCACCGGCGACGTTGSizeHit CountTotal NormTotal
No Reads
dm3
------------------------------------------------------------------------------------------------TGCACTGCCAGCACCGAGGCGATGTCCACCGAACATTACCGCTGTCTGATCCAGAAGCTGCGGGATACCAACGGCGATGCTGSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
...........................................................................................................................................GTCTGATCCAGAAGCTGCGGGAT................2312.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000100000000000000000
.................................................................................................GCACTGCCAGCACCGAGGC..............................................................1912.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................CACCGAGGCGATGTCCACCGAA.................................................2212.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................GAACATTACCGCTGTCTGATCCAGAAGC........................2811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................CCAGAAGCTGCGGGATACCAACGGC.......2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...............................................................................................................................................GATCCAGAAGCTGCGGGATACCA............2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
.......................................................................................................................................CGCTGTCTGATCCAGAAGCTGCGGGA.................2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................GGATACCAACGGCGATGCT.1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................GTCTGATCCAGAAGCTGCGGG..................2111.001000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................GAACATTACCGCTGTCTGATCC..............................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................ACCGCTGTCTGATCCAGAAGCTGCG....................2511.001000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................ACCGAACATTACCGCTGTCTGA.................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...................................................................................................................................................CAGAAGCTGCGGGATACCAACGGC.......2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................CCGCTGTCTGATCCAGAAGCTGC.....................2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................TGTCTGATCCAGAAGCTGCGGGATACC.............2711.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
....................................................................................................................................................AGAAGCTGCGGGATACCAACGG........2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.........................................................................................................................CCACCGAACATTACCGCTGTCT...................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
..........................................................................................................GCACCGAGGCGATGTCCACCGAA.................................................2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
------------------------------------------------------------------------------------------------TGCACTGCCAGCACCGAGGCGATGACCACCGATCATTACCGCTGTCTGATCCAGAAGCTGCGGGATGCCAACGGCGATGCTGSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
........................................................................................................................ACCACCGATCATTACCGCTG......................................2011.00110000000000000000
...............................................................................................................................................GATCCAGAAGCTGCGGGATGCC.............2211.00100000100000000000
droSec2
------------------------------------------------------------------------------------------------TGCACTGCCAGCACCGAGGCTATGACCACCGATCATTACCGCTGTCTGATCCAGAAGCTGCGGGACGCCAACGGCGATGCTGSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
..........................................................................................................GCACCGAGGCTATGACCACCGA..................................................2211.0010010
droYak3
------------------------------------------------------------------------------------------------TGCACTGCCAGCACCGAGCCGATCTCCACCAACCATTACCGCTGTCTGCTCCAGAAGCTGCGGGATGCCAATGGAGACGCTGSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
...........................................................................................................................................GTCTGCTCCAGAAGCTGCGGG..................2111.00100000010000
............................................................................................................................CCAACCATTACCGCTGTCT...................................1911.00100001000000
........................................................................................................................................GCTGTCTGCTCCAGAAGCTGCGGGAT................2611.00100000010000
droEre2
--------------------------------------------------------------------------------------CCATGTCCAGTGCACTGCCAGCACCGAGACGATGTCCACCGATCATTACCGCGATCTGCTCCAGAAGCTGCGGGAGGCCAATGGTGACGCTGSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
No Reads

Generated: 10/20/2015 at 11:03 PM