ID:

dpe_91

 Coordinate:

scaffold_4:2566629-2566684 +

 Confidence:

Known Ortholog

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-26.4 -26.4 -25.6

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

ATCGTGATTAGTGTACAAGCGGAAGGGTGCATCGAGCTGCTTTGATTTGTAGGCCGTGGTTCTTGCAAATACGAATTCATAACGTATTGCACTAGCCCCGGTCCAAAAAACAATAGCAACGCCGGCAACAGCAAAGTATGTACAATTATTCAAAGA

***********************************..(((((((.(((...(((((.((((..(((((.((((.........)))))))))..)))).)))))...))).))).))))..************************************ 		Read size # Mismatch Hit Count Total Norm Total M042

female body

 V042

embryo

 V111

male body		 V050

head

 M021

embryo

 V057

head
....................................................................................TATTGCACTAGCCCCGGTCCA................................................... 21 0 1 376.00 376 291 70 8 2 5 0
....................................................................................TATTGCACTAGCCCCGGTCCAA.................................................. 22 0 1 207.00 207 186 17 2 1 1 0
....................................................................................TATTGCACTAGCCCCGGTCC.................................................... 20 0 1 200.00 200 156 28 9 5 2 0
....................................................................................TATTGCACTAGCCCCGGTCCAAA................................................. 23 0 1 56.00 56 48 8 0 0 0 0
....................................................................................TATTGCACTAGCCCCGGTC..................................................... 19 0 1 42.00 42 26 8 3 3 2 0
....................................................................................TATTGCACTAGCCCCGGTCA.................................................... 20 1 1 29.00 29 22 3 4 0 0 0
.....................................................................................ATTGCACTAGCCCCGGTCCA................................................... 20 0 1 28.00 28 28 0 0 0 0 0
.....................................................................................ATTGCACTAGCCCCGGTCCAA.................................................. 21 0 1 24.00 24 24 0 0 0 0 0
....................................................................................TATTGCACTAGCCCCGGTCCAAAAA............................................... 25 0 1 19.00 19 18 1 0 0 0 0
....................................................................................TATTGCACTAGCCCCGGTCCAAAA................................................ 24 0 1 17.00 17 15 2 0 0 0 0
.....................................................................................ATTGCACTAGCCCCGGTCC.................................................... 19 0 1 14.00 14 14 0 0 0 0 0
....................................................................................TATTGCACGAGCCCCGGTCCA................................................... 21 1 1 14.00 14 14 0 0 0 0 0
....................................................................................TATTGCACTAGCCCCGGTCT.................................................... 20 1 1 12.00 12 6 1 5 0 0 0
..................................................AGGCCGTGGTTCTTGCAAATACG................................................................................... 23 0 1 10.00 10 9 1 0 0 0 0
....................................................................................TATTGCACTAGCCCCGGTCAA................................................... 21 1 1 7.00 7 6 0 1 0 0 0
....................................................................................TATTGCACAAGCCCCGGTCCA................................................... 21 1 1 7.00 7 7 0 0 0 0 0
....................................................................................TATTGCACGAGCCCCGGTCC.................................................... 20 1 1 6.00 6 6 0 0 0 0 0
....................................................................................TATTGCACGAGCCCCGGTCCAA.................................................. 22 1 1 6.00 6 6 0 0 0 0 0
....................................................................................TATTGCACTAGCCCCGGTCG.................................................... 20 1 1 5.00 5 1 0 4 0 0 0
....................................................................................TATTGCACTAGCCCCGGTCCT................................................... 21 1 1 5.00 5 1 1 3 0 0 0
....................................................................................TATTGCACAAGCCCCGGTCC.................................................... 20 1 1 5.00 5 5 0 0 0 0 0
.....................................................................................ATTGCACTAGCCCCGGTCCAAA................................................. 22 0 1 4.00 4 4 0 0 0 0 0
..................................................AGGCCGTGGTTCTTGCAAATACGA.................................................................................. 24 0 1 4.00 4 4 0 0 0 0 0
....................................................................................TATTGCACTAGCCCCGGT...................................................... 18 0 1 4.00 4 4 0 0 0 0 0
....................................................................................TATTGCACTAGCCCCGGTAAA................................................... 21 2 1 3.00 3 3 0 0 0 0 0
..................................................AGGCCGTGGTTCTTGCAAAT...................................................................................... 20 0 1 3.00 3 0 1 2 0 0 0
....................................................................................TATTGCACTAGCCCCGGTCCAT.................................................. 22 1 1 3.00 3 2 0 0 1 0 0
....................................................................................TATTGCACAAGCCCCGGTCCAA.................................................. 22 1 1 3.00 3 3 0 0 0 0 0
....................................................................................TATTGCACTAGCCCCGTTT..................................................... 19 2 1 3.00 3 1 0 1 1 0 0
..................................................AGGCCGTGGTTCTTGCAAATA..................................................................................... 21 0 1 3.00 3 0 1 2 0 0 0
....................................................................................TATTGCACTAGCCCCGGTT..................................................... 19 1 1 2.00 2 1 0 0 1 0 0
....................................................................................TATTGCACGAGCCCCGGTCCAAA................................................. 23 1 1 2.00 2 2 0 0 0 0 0
....................................................................................TATTGCACTAGCCCCGGTCCAAT................................................. 23 1 1 2.00 2 1 1 0 0 0 0
....................................................................................TATTGCACTAGCCCCGGTCCAAAAAA.............................................. 26 0 1 2.00 2 2 0 0 0 0 0
....................................................................................TATTGCACTAGCCCCGGTCCC................................................... 21 1 1 2.00 2 0 0 1 1 0 0
......................................................................................TTGCACTAGCCCCGGTCCAA.................................................. 20 0 1 2.00 2 2 0 0 0 0 0
....................................................................................TATTGCACTAGCCCCGGTCCGT.................................................. 22 2 1 2.00 2 0 0 2 0 0 0
....................................................................................TATTGCACTAGCCCCGGTCTC................................................... 21 2 1 2.00 2 0 0 2 0 0 0
....................................................................................TATTGCACTAGCCCCGGTTA.................................................... 20 2 1 2.00 2 1 0 1 0 0 0
....................................................................................TATTGCACTAGCCCCGGTCTT................................................... 21 2 1 2.00 2 0 0 2 0 0 0
.....................................................................................ATTGCACTAGCCCCGGTC..................................................... 18 0 1 2.00 2 2 0 0 0 0 0
....................................................................................TATTGCACCAGCCCCGGTCCAA.................................................. 22 1 1 2.00 2 2 0 0 0 0 0
....................................................................................TATTGCACTAGCCCCGGTCCGTT................................................. 23 3 1 2.00 2 0 0 2 0 0 0
....................................................................................TATTGCACCAGCCCCGGTCC.................................................... 20 1 1 2.00 2 2 0 0 0 0 0
.....................................................................................ATTGCACTAGCCCCGGTCCAAAAA............................................... 24 0 1 2.00 2 2 0 0 0 0 0
...................................................................................ATATTGCACTAGCCCCGGTCA.................................................... 21 2 1 1.00 1 1 0 0 0 0 0
....................................................................................TATTGCACGAGCCCCGGTCAA................................................... 21 2 1 1.00 1 1 0 0 0 0 0
....................................................................................TATTGCACTAGCCCCGGTTC.................................................... 20 1 1 1.00 1 0 0 1 0 0 0
....................................................................................TATTGCACTAGCCCCGTTAAAA.................................................. 22 3 1 1.00 1 0 0 1 0 0 0
....................................................................................TATTGAACTAGCCCCGGTCCA................................................... 21 1 1 1.00 1 0 1 0 0 0 0
....................................................................................TATTGCACTAGCCCCGGTCCAAAAAAA............................................. 27 1 1 1.00 1 1 0 0 0 0 0
....................................................................................TATTGCACTAGCCCCTGTCCA................................................... 21 1 1 1.00 1 1 0 0 0 0 0
..................................................AGGCCGTGGTTCTTGCAAATACGT.................................................................................. 24 1 1 1.00 1 0 0 1 0 0 0
....................................................................................TATTGCACTAGGCCCGGTCCA................................................... 21 1 1 1.00 1 0 1 0 0 0 0
....................................................................................AATTGCACTAGCCCCGGTCCA................................................... 21 1 1 1.00 1 0 1 0 0 0 0
.....................................................................................ATTGCACTGGCCCCGGTCCA................................................... 20 1 1 1.00 1 1 0 0 0 0 0
....................................................................................TATTGCACTACCCCCGGTCA.................................................... 20 2 1 1.00 1 1 0 0 0 0 0
....................................................................................TATTGCACTAGCCCCGTTCT.................................................... 20 2 1 1.00 1 0 0 1 0 0 0
......................................................................................TTGCACTAGCCCCGGTCCAAA................................................. 21 0 1 1.00 1 1 0 0 0 0 0
....................................................................................TATTGCACTAGCCCCGGTCCACA................................................. 23 1 1 1.00 1 0 1 0 0 0 0
....................................................................................TATTGCACTAGCCCCGGTA..................................................... 19 1 1 1.00 1 0 0 1 0 0 0
....................................................................................TATTGCACTAGCCCCGGTCCAAAAAAAA............................................ 28 1 1 1.00 1 1 0 0 0 0 0
....................................................................................TATTGCACTAGCCCCGGTCCCT.................................................. 22 2 1 1.00 1 1 0 0 0 0 0
....................................................................................TATTGCACTAGCCCCGGTCAAA.................................................. 22 1 1 1.00 1 0 0 0 1 0 0
...................................................GGCCGTGGTTCTTGCAAATACG................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0
....................................................................................TATTGCACCAGCCCCGGTCCT................................................... 21 2 1 1.00 1 1 0 0 0 0 0
....................................................................................TATTGCAATAGCCCCGGTCCA................................................... 21 1 1 1.00 1 0 1 0 0 0 0
....................................................................................TATTGCACTAGCCCCGGTCCAC.................................................. 22 1 1 1.00 1 1 0 0 0 0 0
..................................................AGGCCGTGGTTCTTGCAAATACA................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
....................................................................................TATTGCACTAGCCCCGGTCCAATG................................................ 24 2 1 1.00 1 1 0 0 0 0 0
....................................................................................TATTGCACGACCCCCGGTCCA................................................... 21 2 1 1.00 1 1 0 0 0 0 0
....................................................................................TAATGCTCTAGCCCCGGTCCAA.................................................. 22 2 1 1.00 1 0 1 0 0 0 0
....................................................................................TATTGCACTAGCCCCGGTAT.................................................... 20 2 1 1.00 1 0 1 0 0 0 0
....................................................................................TATTGCACTAGCCCCGGTTAA................................................... 21 2 1 1.00 1 0 0 1 0 0 0
....................................................................................TATTGCACGAGCGCCGGTCCAA.................................................. 22 2 1 1.00 1 1 0 0 0 0 0
....................................................................................TATTGCACTACCCCCGGTCCA................................................... 21 1 1 1.00 1 1 0 0 0 0 0
....................................................................................TATTGCGCTAGCCCCGGGCCGA.................................................. 22 3 1 1.00 1 0 1 0 0 0 0
....................................................................................TATTGCACTAGCCCCGGCCCAA.................................................. 22 1 1 1.00 1 1 0 0 0 0 0
.......................................................................................TGCACTAGCCCCGGTCCA................................................... 18 0 1 1.00 1 1 0 0 0 0 0
...................................................................................GTATTGCACTAGCCCCGGTCCAA.................................................. 23 0 1 1.00 1 1 0 0 0 0 0
....................................................................................TATTGCACTAGCCCCGTTA..................................................... 19 2 1 1.00 1 0 0 1 0 0 0
....................................................................................TATTGCACTAGCCCCGGTCTTT.................................................. 22 3 1 1.00 1 1 0 0 0 0 0
....................................................................................TATTGCACTAGCCCCGGTTT.................................................... 20 2 1 1.00 1 0 0 0 1 0 0
.....................................................................................TTTGCACTAGCCCCGGTCC.................................................... 19 1 1 1.00 1 1 0 0 0 0 0
.....................................................................................ATTGCACTAGCCCCGGTCCCC.................................................. 21 2 1 1.00 1 1 0 0 0 0 0
....................................................................................TATTGCACTAGCCCCGGCCCA................................................... 21 1 1 1.00 1 1 0 0 0 0 0
....................................................................................TATTGCACTAGCCCCGGTAA.................................................... 20 2 1 1.00 1 1 0 0 0 0 0
.....................................................................................ATTGCACTAGCCCCGGTCCAC.................................................. 21 1 1 1.00 1 1 0 0 0 0 0
........................................................................................GCACTAGCCCCGGTCCAA.................................................. 18 0 1 1.00 1 1 0 0 0 0 0
....................................................................................GATTGCACTAGCCCCGGTCC.................................................... 20 1 1 1.00 1 1 0 0 0 0 0
....................................................................................TATTGCACCAGCCCCGGTCCA................................................... 21 1 1 1.00 1 1 0 0 0 0 0
....................................................................................TATTGCACTAGCCCCGGTCCCA.................................................. 22 1 1 1.00 1 1 0 0 0 0 0
.....................................................................................ATTGCACTAGCCCCGGTCTA................................................... 20 1 1 1.00 1 1 0 0 0 0 0
.....................................................................................GTTGCACTAGCCCCGGTCCA................................................... 20 1 1 1.00 1 1 0 0 0 0 0
....................................................................................TATTGCACCAGCCCCGGTCCAAA................................................. 23 1 1 1.00 1 1 0 0 0 0 0
....................................................................................TATTGCACTAGCCCCGTTCG.................................................... 20 2 1 1.00 1 0 0 1 0 0 0
......................................................................................TTGCACTAGCCCCGGTCA.................................................... 18 1 1 1.00 1 1 0 0 0 0 0
....................................................................................TATTACACTAGCCCCGGTCCA................................................... 21 1 1 1.00 1 0 1 0 0 0 0
....................................................................................TATTGCACTAGCCCCGGTTTT................................................... 21 3 1 1.00 1 1 0 0 0 0 0
....................................................................................TATTGCACTAGCCCCGGTCCAG.................................................. 22 1 1 1.00 1 1 0 0 0 0 0
.....................................................................................ATTGCACTAGTCCCGGTAAAAA................................................. 22 3 1 1.00 1 1 0 0 0 0 0
...................................................................................CTATTGCACTAGCCCCGGTCAAAA................................................. 24 2 1 1.00 1 1 0 0 0 0 0
....................................................................................TATTGCACGAGCCCCGGTCA.................................................... 20 2 1 1.00 1 1 0 0 0 0 0
.....................................................................................ATTGCACTAGCCCCGGTCCAAT................................................. 22 1 1 1.00 1 1 0 0 0 0 0
....................................................................................TATTGCACTAGCCCCGGTCAAG.................................................. 22 2 1 1.00 1 1 0 0 0 0 0
....................................................................................GATTGCACTAGCCCCGGTCCT................................................... 21 2 1 1.00 1 0 1 0 0 0 0
....................................................................................TATTGCACTAGCCCCGGTCCTAA................................................. 23 1 1 1.00 1 1 0 0 0 0 0
.....................................................................................ATTGCACTAGCCCCGGTCCAAAA................................................ 23 0 1 1.00 1 1 0 0 0 0 0
..................................................................................TGTATTGCACTAGCCCCGGTCCAAAAA............................................... 27 1 1 1.00 1 1 0 0 0 0 0
....................................................................................TATTGCAATAGCCCCGGACC.................................................... 20 2 1 1.00 1 0 1 0 0 0 0
....................................................................................TATTGCACTAGCCCCGGTTAAG.................................................. 22 3 1 1.00 1 0 0 1 0 0 0
....................................................................................TATTGCACTATCCCCGGTCC.................................................... 20 1 1 1.00 1 1 0 0 0 0 0
....................................................................................TATTGCACTAGCCCCTGTC..................................................... 19 1 1 1.00 1 0 0 1 0 0 0
....................................................................................TATTGCACGAGCCCCGGTCCATAAA............................................... 25 2 1 1.00 1 1 0 0 0 0 0
.....................................................................................ATTGCACTAGCCCCGGTCA.................................................... 19 1 1 1.00 1 1 0 0 0 0 0
....................................................................................TATTGCACTAGCCCCGGTCAC................................................... 21 2 1 1.00 1 1 0 0 0 0 0
....................................................................................TATTGCACTAGCCCCGGTCCAAGT................................................ 24 2 1 1.00 1 0 0 1 0 0 0
....................................................................................TATTGCACTAGCCCCGTTTCT................................................... 21 3 3 0.67 2 0 0 2 0 0 0
....................................................................................TATTGCACTACCCCCGGTA..................................................... 19 2 2 0.50 1 1 0 0 0 0 0
....................................................................................TATTGCACTAGCCCCGTTCA.................................................... 20 2 2 0.50 1 0 0 1 0 0 0
....................................................................................AATTGCACTAGCCCCGGTCT.................................................... 20 2 2 0.50 1 0 1 0 0 0 0
....................................................................................TATTGCACTCGCCCCCGTCCA................................................... 21 2 2 0.50 1 0 1 0 0 0 0
....................................................................................TATTGCACTTTCCCCGGCCCAA.................................................. 22 3 4 0.50 2 0 2 0 0 0 0
.....................................................................................ATTGCACTAGTCCCGGCCAAAA................................................. 22 3 2 0.50 1 1 0 0 0 0 0
....................................................................................TATTGCACTAGCCCCGTTTG.................................................... 20 3 3 0.33 1 0 0 1 0 0 0
....................................................................................TATTGCACTAGCCCCGTCCA.................................................... 20 3 3 0.33 1 1 0 0 0 0 0
.....................................................................................ATTGCACTAGTCCCGGTAAA................................................... 20 3 4 0.25 1 1 0 0 0 0 0
..............................ATCGAGCTTCTTTGATGTA........................................................................................................... 19 3 20 0.05 1 0 1 0 0 0 0
.....................................................................................ATTGCCCTAGCCCCGGACT.................................................... 19 3 20 0.05 1 0 0 0 0 0 1

Anti-sense strand reads

TAGCACTAATCACATGTTCGCCTTCCCACGTAGCTCGACGAAACTAAACATCCGGCACCAAGAACGTTTATGCTTAAGTATTGCATAACGTGATCGGGGCCAGGTTTTTTGTTATCGTTGCGGCCGTTGTCGTTTCATACATGTTAATAAGTTTCT

************************************..(((((((.(((...(((((.((((..(((((.((((.........)))))))))..)))).)))))...))).))).))))..*********************************** 		Read size # Mismatch Hit Count Total Norm Total V042

embryo

 M042

female body
..........................................................................................................TTTGGTTATCGGTGCGGCAGTTG........................... 23 3 1 1.00 1 1 0
........................................................................GTTAAGTGTTGCATAGCGT................................................................. 19 3 20 0.05 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_4:2566579-2566734 + dpe_91 ATCGTGATTAGTGTACAAGCGGAAGGGTGCATCGAGCTGC--TTTGATTTGTAGGCCGTGGTT-CTTGCAAATACGAATTCA-TAACGTATTGCACTAGCCCCGGTCCAAA-AAACAATAGCAACGCCGGCAACAGCAAAGTATGTACAATT----AT--TCAAAGA
dp5 3:8679848-8679994 + dps-mir-92c ATCGTGATTAGTGTACAAGCGGAAGGGTGCATCGAGCTGC--TTTGATTTGTAGGCCGTGGTT-CTTGCAAATACGGATTCA-TAACGTATTGCACTAGCCCCGGTCCAAA-AAACAATAGCAACGCCGGCAACAGCAAAGTATGTACAATT---------------
droAna3 scaffold_13266:4132790-4132937 + dan-mir-311a A-----------------GCTAAAAAGTGTTTAGAACTTCGATTTTATTTGTAGGTCGCGGAAGGTTGCA-ATGCGTATTTTGAATCGTATTGCACTTTCCCCGGCCCATAGATATTATACGAACAGCAGCGATCGCTATCTGAGAGAAA-TATTTGTTGCCAGATT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
ATCGTGATTAGTGTACAAGCGGAAGGGTGCATCGAGCTGC--TTTGATTTGTAGGCCGTGGTT-CTTGCAAATACGAATTCA-TAACGTATTGCACTAGCCCCGGTCCAAA-AAACAATAGCAACGCCGGCAACAGCAAAGTATGTACAATT----AT--TCAAAGASizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
........................................................................................TATTGCACTAGCCCCGGTCCA..........................................................211376.00376529170208
........................................................................................TATTGCACTAGCCCCGGTCCAA.........................................................221207.00207118617102
........................................................................................TATTGCACTAGCCCCGGTCC...........................................................201200.00200215628509
........................................................................................TATTGCACTAGCCCCGGTCCAAA-.......................................................23156.00560488000
........................................................................................TATTGCACTAGCCCCGGTC............................................................19142.00422268303
........................................................................................TATTGCACTAGCCCCGGTCA...........................................................20129.00290223004
.........................................................................................ATTGCACTAGCCCCGGTCCA..........................................................20128.00280280000
.........................................................................................ATTGCACTAGCCCCGGTCCAA.........................................................21124.00240240000
........................................................................................TATTGCACTAGCCCCGGTCCAAA-AA.....................................................25119.00190181000
........................................................................................TATTGCACTAGCCCCGGTCCAAA-A......................................................24117.00170152000
.........................................................................................ATTGCACTAGCCCCGGTCC...........................................................19114.00140140000
........................................................................................TATTGCACTAGCCCCGGTCT...........................................................20112.0012061005
....................................................AGGCCGTGGTT-CTTGCAAATACG...........................................................................................23110.0010091000
........................................................................................TATTGCACTAGCCCCGGTCG...........................................................2015.005010004
........................................................................................TATTGCACTAGCCCCGGTCCT..........................................................2115.005011003
.........................................................................................ATTGCACTAGCCCCGGTCCAAA-.......................................................2214.004040000
....................................................AGGCCGTGGTT-CTTGCAAATACGA..........................................................................................2414.004040000
........................................................................................TATTGCACTAGCCCCGGT.............................................................1814.004040000
....................................................AGGCCGTGGTT-CTTGCAAAT..............................................................................................2013.003001002
........................................................................................TATTGCACTAGCCCCGGTCCAT.........................................................2213.003020100
....................................................AGGCCGTGGTT-CTTGCAAATA.............................................................................................2113.003001002
........................................................................................TATTGCACTAGCCCCGGTT............................................................1912.002010100
........................................................................................TATTGCACTAGCCCCGGTCCAAT-.......................................................2312.002011000
........................................................................................TATTGCACTAGCCCCGGTCCAAA-AAA....................................................2612.002020000
........................................................................................TATTGCACTAGCCCCGGTCCC..........................................................2112.002000101
..........................................................................................TTGCACTAGCCCCGGTCCAA.........................................................2012.002020000
........................................................................................TATTGCACTAGCCCCGGTCCGT.........................................................2212.002000002
........................................................................................TATTGCACTAGCCCCGGTCTC..........................................................2112.002000002
........................................................................................TATTGCACTAGCCCCGGTTA...........................................................2012.002010001
........................................................................................TATTGCACTAGCCCCGGTCTT..........................................................2112.002000002
.........................................................................................ATTGCACTAGCCCCGGTC............................................................1812.002020000
........................................................................................TATTGCACTAGCCCCGGTCCGTT-.......................................................2312.002000002
.........................................................................................ATTGCACTAGCCCCGGTCCAAA-AA.....................................................2412.002020000
........................................................................................TATTGCACTAGCCCCGGTCCAAA-AAAA...................................................2711.001010000
....................................................AGGCCGTGGTT-CTTGCAAATACGT..........................................................................................2411.001000001
..........................................................................................TTGCACTAGCCCCGGTCCAAA-.......................................................2111.001010000
........................................................................................TATTGCACTAGCCCCGGTA............................................................1911.001000001
........................................................................................TATTGCACTAGCCCCGGTCCCT.........................................................2211.001010000
.....................................................GGCCGTGGTT-CTTGCAAATACG...........................................................................................2211.001010000
........................................................................................TATTGCACTAGCCCCGGTCCAC.........................................................2211.001010000
....................................................AGGCCGTGGTT-CTTGCAAATACA...........................................................................................2311.001010000
........................................................................................TATTGCACTAGCCCCGGTCCAAT-G......................................................2411.001010000
........................................................................................TATTGCACTAGCCCCGGTAT...........................................................2011.001001000
...........................................................................................TGCACTAGCCCCGGTCCA..........................................................1811.001010000
.......................................................................................GTATTGCACTAGCCCCGGTCCAA.........................................................2311.001010000
........................................................................................TATTGCACTAGCCCCGGTCTTT.........................................................2211.001010000
........................................................................................TATTGCACTAGCCCCGGTTT...........................................................2011.001000100
.........................................................................................ATTGCACTAGCCCCGGTCCCC.........................................................2111.001010000
........................................................................................TATTGCACTAGCCCCGGTAA...........................................................2011.001010000
.........................................................................................ATTGCACTAGCCCCGGTCCAC.........................................................2111.001010000
............................................................................................GCACTAGCCCCGGTCCAA.........................................................1811.001010000
..........................................................................................TTGCACTAGCCCCGGTCA...........................................................1811.001010000
........................................................................................TATTGCACTAGCCCCGGTTTT..........................................................2111.001010000
........................................................................................TATTGCACTAGCCCCGGTCCAG.........................................................2211.001010000
.........................................................................................ATTGCACTAGCCCCGGTCCAAT-.......................................................2211.001010000
.........................................................................................ATTGCACTAGCCCCGGTCCAAA-A......................................................2311.001010000
.........................................................................................ATTGCACTAGCCCCGGTCA...........................................................1911.001010000
........................................................................................TATTGCACTAGCCCCGGTCAC..........................................................2111.001010000
........................................................................................TATTGCACTAGCCCCGGTCCAAG-T......................................................2411.001000001
dp5
ATCGTGATTAGTGTACAAGCGGAAGGGTGCATCGAGCTGC--TTTGATTTGTAGGCCGTGGTT-CTTGCAAATACGGATTCA-TAACGTATTGCACTAGCCCCGGTCCAAA-AAACAATAGCAACGCCGGCAACAGCAAAGTATGTACAATT---------------SizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
........................................................................................TATTGCACTAGCCCCGGTCCA..........................................................2111490.0014900104252111094070191470
........................................................................................TATTGCACTAGCCCCGGTCC...........................................................201898.00898067211615349153340
........................................................................................TATTGCACTAGCCCCGGTCCAA.........................................................221826.008260567547361019181150
....................................................AGGCCGTGGTT-CTTGCAAATACG...........................................................................................231637.00637059600410305271
........................................................................................TATTGCACTAGCCCCGGTC............................................................191237.00237013784218270410
........................................................................................TATTGCACTAGCCCCGGTCCAAA-.......................................................231188.0018801084047023240
.........................................................................................ATTGCACTAGCCCCGGTCCA..........................................................20198.009809700010000
........................................................................................TATTGCACTAGCCCCGGTCCAAA-A......................................................24193.0093063191401050
.........................................................................................ATTGCACTAGCCCCGGTCCAA.........................................................21175.007507120001010
........................................................................................TATTGCACTAGCCCCGGTCA...........................................................20172.007206210016020
........................................................................................TATTGCACTAGCCCCGGTCT...........................................................20169.00690291214210110
.........................................................................................ATTGCACTAGCCCCGGTCC...........................................................19165.006506230000000
........................................................................................TATTGCACTAGCCCCGGTCCC..........................................................21162.0062040547210210
........................................................................................TATTGCACTAGCCCCGGTCCAAA-AA.....................................................25161.0061044130000040
....................................................AGGCCGTGGTT-CTTGCAAATAC............................................................................................22161.006106510021460
....................................................AGGCCGTGGTT-CTTGCAAATA.............................................................................................21141.0041040001150210
........................................................................................TATTGCACTAGCCCCGGTCG...........................................................20141.004108010622040
........................................................................................TATTGCACTAGCCCCGGTCCCC.........................................................22126.00260505025090
....................................................AGGCCGTGGTT-CTTGCAAAT..............................................................................................20125.002503000030190
........................................................................................TATTGCACTAGCCCCGGTCCAAA-AAA....................................................26121.002101920000000
........................................................................................TATTGCACTAGCCCCGGTCCT..........................................................21116.00160600004060
........................................................................................TATTGCACTAGCCCCGGTTT...........................................................20115.00150401032050
....................................................AGGCCGTGGTT-CTTGCAAATACGA..........................................................................................24115.00150910000050
.........................................................................................ATTGCACTAGCCCCGGTCCAAA-.......................................................22114.001401300000010
........................................................................................TATTGCACTAGCCCCGGTT............................................................19114.001404000000100
........................................................................................TATTGCACTAGCCCCGGTCCAT.........................................................22114.00140500200070
........................................................................................TATTGCACTAGCCCCGGTCCAAT-.......................................................23113.00130520000150
.........................................................................................ATTGCACTAGCCCCGGTC............................................................18112.001201200000000
........................................................................................TATTGCACTAGCCCCGGTTTT..........................................................21111.00110100012070
........................................................................................TATTGCACTAGCCCCGGTCTT..........................................................21111.00110300001070
........................................................................................TATTGCACTAGCCCCGGT.............................................................18110.00100601002010
.........................................................................................ATTGCACTAGCCCCGGTCCAAA-A......................................................23110.00100910000000
........................................................................................TATTGCACTAGCCCCGGTCCAC.........................................................2219.0090710001000
........................................................................................TATTGCACTAGCCCCGGTCCAAA-AAAA...................................................2718.0080800000000
........................................................................................TATTGCACTAGCCCCGGTAA...........................................................2018.0080700000010
....................................................AGGCCGTGGTT-CTTGCAAATAA............................................................................................2218.0080000000080
........................................................................................TATTGCACTAGCCCCGGTA............................................................1917.0070500100010
.........................................................................................ATTGCACTAGCCCCGGTCA...........................................................1917.0070700000000
....................................................AGGCCGTGGTT-CTTGCAAATACGT..........................................................................................2416.0060100000050
.........................................................................................ATTGCACTAGCCCCGGTCCAAA-AA.....................................................2416.0060600000000
........................................................................................TATTGCACTAGCCCCGGTTA...........................................................2016.0060000002040
........................................................................................TATTGCACTAGCCCCGGTCCCT.........................................................2216.0060200000040
........................................................................................TATTGCACTAGCCCCGGTCCAG.........................................................2216.0060500001000
........................................................................................TATTGCACTAGCCCCGGTCCTT.........................................................2216.0060200001030
....................................................AGGCCGTGGTT-CTTGCAAATACC...........................................................................................2315.0050001010030
..........................................................................................TTGCACTAGCCCCGGTCC...........................................................1815.0050500000000
..........................................................................................TTGCACTAGCCCCGGTCCA..........................................................1915.0050400000010
........................................................................................TATTGCACTAGCCCCGGTCTC..........................................................2115.0050101010020
........................................................................................TATTGCACTAGCCCCGGTCCCCC-.......................................................2325.00100303002020
..........................................................................................TTGCACTAGCCCCGGTCCAA.........................................................2015.0050401000000
....................................................AGGCCGTGGTT-CTTGCAAATACA...........................................................................................2314.0040200000020
....................................................AGGCCGTGGTT-CTTGCAAAA..............................................................................................2014.0040000000040
........................................................................................TATTGCACTAGCCCCGGTCTTC.........................................................2214.0040000000040
........................................................................................TATTGCACTAGCCCCGGTCCG..........................................................2114.0040200110000
........................................................................................TATTGCACTAGCCCCGGTCCAAA-AG.....................................................2513.0030200000010
....................................................AGGCCGTGGTT-CTTGCAAATACGG..........................................................................................2413.0030000000030
........................................................................................TATTGCACTAGCCCCGGTCCATT-T......................................................2413.0030000000030
.....................................................GGCCGTGGTT-CTTGCAAATACG...........................................................................................2213.0030300000000
........................................................................................TATTGCACTAGCCCCGGTCCAAA-T......................................................2413.0030201000000
........................................................................................TATTGCACTAGCCCCGGTCTTT.........................................................2213.0030100010010
.........................................................................................ATTGCACTAGCCCCGGTCCAAA-AAA....................................................2512.0020200000000
........................................................................................TATTGCACTAGCCCCGGTCCAAG-.......................................................2312.0020020000000
........................................................................................TATTGCACTAGCCCCGGTCCATT-.......................................................2312.0020100001000
.........................................................................................ATTGCACTAGCCCCGGTCCAAA-AAAA...................................................2612.0020200000000
....................................................AGGCCGTGGTT-CTTGCAAATC.............................................................................................2112.0020000000020
........................................................................................TATTGCACTAGCCCCGGTTTG..........................................................2112.0020000001010
....................................................AGGCCGTGGTT-CTTGCAAATACGGAT........................................................................................2612.0020000000020
.......................................................................................GTATTGCACTAGCCCCGGTCCA..........................................................2212.0020200000000
........................................................................................TATTGCACTAGCCCCGGTCTCT.........................................................2212.0020000010010
.......................................................................................GTATTGCACTAGCCCCGGTCC...........................................................2112.0020200000000
..........................................................................................TTGCACTAGCCCCGGTCCAAA-.......................................................2112.0020101000000
........................................................................................TATTGCACTAGCCCCGGTCCAAA-G......................................................2412.0020110000000
.....................................................GGCCGTGGTT-CTTGCAAATA.............................................................................................2012.0020200000000
....................................................AGGCCGTGGTT-CTTGCAAATACCC..........................................................................................2412.0020000000020
........................................................................................TATTGCACTAGCCCCGG..............................................................1712.0020000000020
.........................................................................................ATTGCACTAGCCCCGGTCCAAT-.......................................................2212.0020200000000
.........................................................................................ATTGCACTAGCCCCGGTCT...........................................................1911.0010100000000
....................................................AGGCCGTGGTT-CTTGCAAATT.............................................................................................2111.0010000000010
....................................................AGGCCGTGGTT-CTTGCAAATAAA...........................................................................................2311.0010000000010
.....................................................................................ACGTATTGCACTAGCCCCGGTCCAG.........................................................2511.0010100000000
..........................................................................................TTGCACTAGCCCCGGTCA...........................................................1811.0010100000000
........................................................................................TATTGCACTAGCCCCGGTCCAAG-T......................................................2411.0010010000000
...........................................................................................TGCACTAGCCCCGGTCCAAA-.......................................................2011.0010100000000
.........................................................................................ATTGCACTAGCCCCGGTCCC..........................................................2011.0010001000000
........................................................................................TATTGCACTAGCCCCGGTCTG..........................................................2111.0010000000010
........................................................................................TATTGCACTAGCCCCGGTCCAAA-AT.....................................................2511.0010010000000
.........................................................................................ATTGCACTAGCCCCGGTCCAT.........................................................2111.0010100000000
................................................................................CA-TAACGTATTGCACTAGCCCCGGTCC...........................................................2711.0010001000000
.........................................................................................ATTGCACTAGCCCCGGTCCTT.........................................................2111.0010100000000
....................................................AGGCCGTGGTT-CTTGCAAATTA............................................................................................2211.0010100000000
.........................................................................................ATTGCACTAGCCCCGGTCCG..........................................................2011.0010100000000
........................................................................................TATTGCACTAGCCCCGGTTTC..........................................................2121.0020000000020
........................................................................................TATTGCACTAGCCCCGGTCAC..........................................................2111.0010100000000
....................................................AGGCCGTGGTT-CTTGCAA................................................................................................1811.0010000000010
........................................................................................TATTGCACTAGCCCCGGA.............................................................1811.0010000000010
....................................................AGGCCGTGGTT-CTTGCAAATACT...........................................................................................2311.0010000000010
.........................................................................................ATTGCACTAGCCCCGGTCCATT-.......................................................2211.0010001000000
........................................................................................TATTGCACTAGCCCCGGTCCAAT-T......................................................2411.0010000000010
.......................................................................................GTATTGCACTAGCCCCGGTC............................................................2011.0010100000000
........................................................................................TATTGCACTAGCCCCGGTCCAAC-.......................................................2311.0010100000000
...........................................................................................TGCACTAGCCCCGGTCCAAA-AA.....................................................2211.0010100000000
..........................................................................................TTGCACTAGCCCCGGTCCAAA-G......................................................2211.0010010000000
droAna3
A-----------------GCTAAAAAGTGTTTAGAACTTCGATTTTATTTGTAGGTCGCGGAAGGTTGCA-ATGCGTATTTTGAATCGTATTGCACTTTCCCCGGCCCATAGATATTATACGAACAGCAGCGATCGCTATCTGAGAGAAA-TATTTGTTGCCAGATTSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
........................................................................................TATTGCACTTTCCCCGGCCCAT.........................................................22134173.0034173245630922783219
........................................................................................TATTGCACTTTCCCCGGCCCA..........................................................21110436.001043610838865473618
........................................................................................TATTGCACTTTCCCCGGCCC...........................................................2018113.0081133857553172003
........................................................................................TATTGCACTTTCCCCGGCCCAC.........................................................2216649.0066491166334010
...................................................TAGGTCGCGGAAGGTTGCA-ATGC............................................................................................2312768.0027682401905485611220
........................................................................................TATTGCACTTTCCCCGGCCCATA........................................................2312401.002401301201681102
...................................................TAGGTCGCGGAAGGTTGCA-ATG.............................................................................................2212067.00206718314214225315
........................................................................................TATTGCACTTTCCCCGGCC............................................................1911665.001665169142266701
........................................................................................TATTGCACTTTCCCCGGCCCATT........................................................2311574.001574147137845103
....................................................AGGTCGCGGAAGGTTGCA-ATGC............................................................................................2211374.001374973623932041587
........................................................................................TATTGCACTTTCCCCGGCCCAA.........................................................2211369.001369297104526001
...................................................TAGGTCGCGGAAGGTTGCA-AT..............................................................................................211826.00826245082592294
.........................................................................................ATTGCACTTTCCCCGGCCCAT.........................................................211633.006331534782000
........................................................................................TATTGCACTTTCCCCGGCCA...........................................................201608.0060813343243000
........................................................................................TATTGCACTTTCCCCGGCCCATAA.......................................................241499.004996142810000
...................................................TAGGTCGCGGAAGGTTGCA-ATGCAA..........................................................................................251468.0046837223208000
...................................................TAGGTCGCGGAAGGTTGCA-ATGCA...........................................................................................241358.0035829219109010
....................................................AGGTCGCGGAAGGTTGCA-ATGCG...........................................................................................231355.00355156423081109
...................................................TAGGTCGCGGAAGGTTGCA-A...............................................................................................201251.0025124125624333
........................................................................................TATTGCACTTTCCCCGGCCCATC........................................................231174.0017431710000
....................................................AGGTCGCGGAAGGTTGCA-ATG.............................................................................................211169.001694350155524
.........................................................................................ATTGCACTTTCCCCGGCCCA..........................................................201168.00168501171000
........................................................................................TATTGCACTTTCCCCGGCCT...........................................................201137.00137151157000
...................................................TAGGTCGCGGAAGGTTGCA-ATGA............................................................................................231105.0010548316110
..........................................................................................TTGCACTTTCCCCGGCCCAT.........................................................201103.0010311911000
.........................................................................................ATTGCACTTTCCCCGGCCCAC.........................................................211102.0010211010000
...................................................TAGGTCGCGGAAGGTTGCA-ATA.............................................................................................22196.009675434010
.........................................................................................ATTGCACTTTCCCCGGCCC...........................................................19189.008921671000
........................................................................................TATTGCACTTTCCCCGGCCCATTT.......................................................24188.00887792000
.........................................................................................ATTGCACTTTCCCCGGCCCATA........................................................22169.006929373000
........................................................................................TATTGCACTTTCCCCGGCCCT..........................................................21168.00687583000
........................................................................................TATTGCACTTTCCCCGGCCCATG........................................................23162.00625561000
...................................................TAGGTCGCGGAAGGTTGCA-AC..............................................................................................21155.00550541000
...................................................TAGGTCGCGGAAGGTTGCA-ATGT............................................................................................23155.005533910030
...................................................TAGGTCGCGGAAGGTTGCA-ATT.............................................................................................22155.005502721070
....................................................AGGTCGCGGAAGGTTGCA-ATGCGA..........................................................................................24154.005402350170
...................................................TAGGTCGCGGAAGGTTGCA-................................................................................................19151.00511116111111
........................................................................................TATTGCACTTTCCCCGGC.............................................................18149.00497420000
...................................................TAGGTCGCGGAAGGTTGCA-ATGCT...........................................................................................24147.00472387000
...................................................TAGGTCGCGGAAGGTTGCA-ATAA............................................................................................23145.004512320010
........................................................................................TATTGCACTTTCCCCGGCCCATTA.......................................................24144.00440431000
........................................................................................TATTGCACTTTCCCCGGCCCATAT.......................................................24138.00382360000
...................................................TAGGTCGCGGAAGGTTGCA-AA..............................................................................................21135.00354189040
...................................................TAGGTCGCGGAAGGTTGCA-ATAAA...........................................................................................24133.003331416000
........................................................................................TATTGCACTTTCCCCGGCCCAG.........................................................22133.003311193000
...................................................TAGGTCGCGGAAGGTTGCA-ATGAAA..........................................................................................25132.00323218000
........................................................................................TATTGCACTTTCCCCGGCCCC..........................................................21131.003111911000
....................................................AGGTCGCGGAAGGTTGCA-ATT.............................................................................................21130.00301110225
...................................................TAGGTCGCGGAAGGTTGCA-ATGCC...........................................................................................24129.00290272000
....................................................AGGTCGCGGAAGGTTGCA-ATGCGT..........................................................................................24128.00285641120
.........................................................................................ATTGCACTTTCCCCGGCCCAA.........................................................21127.002712141000
...................................................TAGGTCGCGGAAGGTTGCA-ATGAA...........................................................................................24126.00261169000
.........................................................................................ATTGCACTTTCCCCGGCCCATT........................................................22123.00236170000
..........................................................................................TTGCACTTTCCCCGGCCCAC.........................................................20122.00220220000
.........................................................................................ATTGCACTTTCCCCGGCC............................................................18122.00227150000
........................................................................................TATTGCACTTTCCCCGGCA............................................................19121.00213144000
....................................................AGGTCGCGGAAGGTTGCA-AT..............................................................................................20121.0021416082
..........................................................................................TTGCACTTTCCCCGGCCCA..........................................................19121.00215160000
........................................................................................TATTGCACTTTCCCCGGCCCAAT........................................................23121.00211200000
..........................................................................................TTGCACTTTCCCCGGCCC...........................................................18118.00180180000
...........................................................................................TGCACTTTCCCCGGCCCAT.........................................................19118.00182160000
...................................................TAGGTCGCGGAAGGTTGCA-ATGCCA..........................................................................................25118.00180513000
........................................................................................TATTGCACTTTCCCCGGCCAT..........................................................21116.00160123001
........................................................................................TATTGCACTTTCCCCGGCCCG..........................................................21113.00130121000
............................................................................................GCACTTTCCCCGGCCCAT.........................................................18113.00131120000
...................................................TAGGTCGCGGAAGGTTGCA-AAA.............................................................................................22112.0012424020
........................................................................................TATTGCACTTTCCCCGGCCCGC.........................................................22112.00120120000
...................................................TAGGTCGCGGAAGGTTGCA-ATGCAC..........................................................................................25112.00120102000
...................................................TAGGTCGCGGAAGGTTGCA-ATC.............................................................................................22112.0012075000
...................................................TAGGTCGCGGAAGGTTGCA-ATGG............................................................................................23111.0011038000
....................................................AGGTCGCGGAAGGTTGCA-A...............................................................................................19110.0010150022
.........................................................................................ATTGCACTTTCCCCGGCCCATAA.......................................................23110.00100100000
........................................................................................TATTGCACTTTCCCCGGCCCATAC.......................................................24110.0010190000
.......................................................................................GTATTGCACTTTCCCCGGCCCAT.........................................................2319.009810000
........................................................................................TATTGCACTTTCCCCGGCAA...........................................................2038.672615110000
...................................................TAGGTCGCGGAAGGTTGCA-ATGCAAT.........................................................................................2618.008035000
...................................................TAGGTCGCGGAAGGTTGCA-AAAA............................................................................................2318.008431000
........................................................................................TATTGCACTTTCCCCGGCCCTA.........................................................2218.008170000
...................................................TAGGTCGCGGAAGGTTGCA-ATGCAAC.........................................................................................2618.008071000
.........................................................................................ATTGCACTTTCCCCGGCCA...........................................................1917.007430000

Generated: 06/28/2015 at 03:59 PM