dpe_904

CDS [Dper\GL14156-cds]; exon [dper_GLEANR_14845:3]; CDS [Dper\GL14156-cds]; exon [dper_GLEANR_14845:2]; intron [Dper\GL14156-in]

##################################################---------------------------------------------------------------------######################################------------ ACGACTGGAGGCATCGCCCGGTGTCGCAAGCGTGTTTTCACGCTCTTCAGGTGAGTATTTGTGGTTCTCTGTGAATGGAATGAAGACGTGCAAATTAAAACCATTTTTACACTTACCAGGAATACCGACAAAGACCAACAAAGGAGTATTGGACTAGCTGCGGCCGGAT ************************************************((((((....((((((.....((.(((.........))).))......))))))......))))))...************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M042 female body	V111 male body
................................................................TTCTCTGTGAATGGAATGAAGG...................................................................................	22	1	4	2.00	8	8	0
..........................................................................................................................TACCGACAAAGACCAACAAAGGAGTATT...................	28	0	1	1.00	1	1	0
........................................................................................................................AATACCGACAAAGACCAACAAAGG.........................	24	0	1	1.00	1	1	0
................................................................TTCTCTGTGAATGGAATGAAGACG.................................................................................	24	0	1	1.00	1	1	0
........................................................................................................................AATACCGACAAAGACCAACAAAGGA........................	25	0	1	1.00	1	1	0
.................................................................TCTCTGTGAATGGAATGAAGACGTGC..............................................................................	26	0	1	1.00	1	1	0
..........................................................................................................................................CAAAGGAGTATTGGACTAGCTGC........	23	0	1	1.00	1	1	0
.CGACTGGAGGCATCGCCCG.....................................................................................................................................................	19	0	1	1.00	1	1	0
................................................................TTCTCTGTGAATGGAATGAAGACGTGA..............................................................................	27	1	1	1.00	1	1	0
.................................................................TCTCTGTGAATGGAATGAAGG...................................................................................	21	1	4	0.25	1	1	0
.............ACGCCCGGTGTCGCAAGCG.........................................................................................................................................	19	1	13	0.08	1	0	1

##################################################---------------------------------------------------------------------######################################------------
ACGACTGGAGGCATCGCCCGGTGTCGCAAGCGTGTTTTCACGCTCTTCAGGTGAGTATTTGTGGTTCTCTGTGAATGGAATGAAGACGTGCAAATTAAAACCATTTTTACACTTACCAGGAATACCGACAAAGACCAACAAAGGAGTATTGGACTAGCTGCGGCCGGAT
**************************************************((((((....((((((.....((.(((.........))).))......))))))......))))))...**************************************************

Read size

# Mismatch

Hit Count

Total Norm

Total

M042
female body

V111
male body

................................................................TTCTCTGTGAATGGAATGAAGG...................................................................................

2.00

..........................................................................................................................TACCGACAAAGACCAACAAAGGAGTATT...................

1.00

........................................................................................................................AATACCGACAAAGACCAACAAAGG.........................

1.00

................................................................TTCTCTGTGAATGGAATGAAGACG.................................................................................

1.00

........................................................................................................................AATACCGACAAAGACCAACAAAGGA........................

1.00

.................................................................TCTCTGTGAATGGAATGAAGACGTGC..............................................................................

1.00

..........................................................................................................................................CAAAGGAGTATTGGACTAGCTGC........

1.00

.CGACTGGAGGCATCGCCCG.....................................................................................................................................................

1.00

................................................................TTCTCTGTGAATGGAATGAAGACGTGA..............................................................................

1.00

.................................................................TCTCTGTGAATGGAATGAAGG...................................................................................

0.25

.............ACGCCCGGTGTCGCAAGCG.........................................................................................................................................

0.08

TGCTGACCTCCGTAGCGGGCCACAGCGTTCGCACAAAAGTGCGAGAAGTCCACTCATAAACACCAAGAGACACTTACCTTACTTCTGCACGTTTAATTTTGGTAAAAATGTGAATGGTCCTTATGGCTGTTTCTGGTTGTTTCCTCATAACCTGATCGACGCCGGCCTA ************************************************((((((....((((((.....((.(((.........))).))......))))))......))))))...************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M042 female body	M021 embryo	V042 embryo	V057 head	V111 male body
................................................TCCACTCATAAACACCAAGAGACACT...............................................................................................	26	0	1	138.00	138	120	18	0	0	0
.................................................CCACTCATAAACACCAAGAGACACT...............................................................................................	25	0	1	80.00	80	76	2	2	0	0
..............................................AGTCCACTCATAAACACCAAGAGACACT...............................................................................................	28	0	1	23.00	23	23	0	0	0	0
.......................................................................................................AAAAATGTGAATGGTCCTTATGGCTGT.......................................	27	0	1	18.00	18	17	0	0	0	1
...............................................GTCCACTCATAAACACCAAGAGACACT...............................................................................................	27	0	1	13.00	13	13	0	0	0	0
................................................TCCACTCATAAACACCAAGAGACAC................................................................................................	25	0	4	9.50	38	38	0	0	0	0
................................................TCCACTCATAAACACCAGGAGACACT...............................................................................................	26	1	1	7.00	7	7	0	0	0	0
..............................................................................................................................................CCTCATAACCTGATCGACGCCGGCCT.	26	0	1	5.00	5	5	0	0	0	0
.............................................AAGTCCACTCATAAACACCAAGAGACACT...............................................................................................	29	0	1	4.00	4	3	1	0	0	0
.............................................................................CTTACTTCTGCACGTTTAATTTTGGT..................................................................	26	0	1	4.00	4	4	0	0	0	0
........................................................................................................AAAATGTGAATGGTCCTTATGGCTGT.......................................	26	0	1	3.00	3	3	0	0	0	0
..........................................................................TACCTTACTTCTGCACGTTTAAT........................................................................	23	0	1	3.00	3	3	0	0	0	0
...................................................................................TCTGCACGTTTAATTTTGGTAAAAAT............................................................	26	0	1	3.00	3	3	0	0	0	0
..................................................CACTCATAAACACCAAGAGACACT...............................................................................................	24	0	1	3.00	3	3	0	0	0	0
................................................TCCACTCATAAACACCAAGAGACACTT..............................................................................................	27	0	1	3.00	3	2	1	0	0	0
.................................................CCACTCATAAACACCAAGAGACAC................................................................................................	24	0	4	2.50	10	10	0	0	0	0
.................................................CCACTCATAAACACCAAGAGACACTT..............................................................................................	26	0	1	2.00	2	2	0	0	0	0
.........................................................................................................AAATGTGAATGGTCCTTATGGCTGT.......................................	25	0	1	2.00	2	2	0	0	0	0
...........GTAGCGGGCCACAGCGTTCGCAC.......................................................................................................................................	23	0	1	2.00	2	2	0	0	0	0
.................................................................................GTTCTGCACGTTTAATTTTGGTAAAAAT............................................................	28	1	1	2.00	2	2	0	0	0	0
...........GTAGCGGGCCACAGCGTTCGC.........................................................................................................................................	21	0	1	2.00	2	2	0	0	0	0
............................................................................................................................................TTCCTCATAACCTGATCGACGCCGGCCT.	28	0	1	2.00	2	2	0	0	0	0
......................................................................................................TAAAAATGTGAATGGTCCTTATGGCTGT.......................................	28	0	1	2.00	2	2	0	0	0	0
............................................................................CCTTACTTCTGCACGTTTAATTTTGGT..................................................................	27	0	1	2.00	2	2	0	0	0	0
.......................................................................................................AAAAATGTGAATGGTCCTGATGGCTGT.......................................	27	1	1	2.00	2	2	0	0	0	0
.................................................CCACTCATAAACACCAGGAGACACT...............................................................................................	25	1	1	2.00	2	2	0	0	0	0
...............CGGGCCACAGCGTTCGCACAAAAGT.................................................................................................................................	25	0	6	1.33	8	6	1	1	0	0
.............AGCGGGCCACAGCGTTCGCACAAAAGT.................................................................................................................................	27	0	6	1.33	8	8	0	0	0	0
.........................................................................................................AAAAGTGAATGGTCCTTATGGCTGT.......................................	25	1	1	1.00	1	1	0	0	0	0
.............................................AAGTCCACTCATAAACACCAGGAGACACT...............................................................................................	29	1	1	1.00	1	1	0	0	0	0
......CCTCCGTAGCGGGCCACAGCGTTCGCAC.......................................................................................................................................	28	0	1	1.00	1	1	0	0	0	0
.........................................................................TTACCTTACTTCTGCACGTTTAAT........................................................................	24	0	1	1.00	1	1	0	0	0	0
..........................................................................................................................ATGGCTGTTTCTGGTTGTTT...........................	20	0	1	1.00	1	0	1	0	0	0
............................................................................CCTTACTTCTGCACGTTTAAT........................................................................	21	0	1	1.00	1	1	0	0	0	0
.................................................................................................TTTGGTAAAAATGTGAATGGTCCTTAT.............................................	27	0	1	1.00	1	1	0	0	0	0
................................................TCCACTCATAAACACCACGAGACACT...............................................................................................	26	1	1	1.00	1	1	0	0	0	0
........................................................................CTTACCTTACTTCTGCACGTTTAAT........................................................................	25	0	1	1.00	1	0	0	1	0	0
.............................CGCACAAAAGTGCGAGAAGTCCACTCAT................................................................................................................	28	0	1	1.00	1	1	0	0	0	0
....................................................................................CTGCACGTTTAATTTTGGTAAAAATGT..........................................................	27	0	1	1.00	1	1	0	0	0	0
....................CACAGCGTTCGCACAAAAGTGCGA.............................................................................................................................	24	0	1	1.00	1	1	0	0	0	0
.................................................CCACTCATAAACACCAAGAGACACTTA.............................................................................................	27	0	1	1.00	1	1	0	0	0	0
.......................................................................................................AAGAATGTGAATGGTCCTTATGGCTGT.......................................	27	1	1	1.00	1	1	0	0	0	0
...............................................................................GACTTCTGCACGTTTAATTTTGGT..................................................................	24	1	1	1.00	1	1	0	0	0	0
.................................................................AGAGACACTTACCTTACTTCTGCACG..............................................................................	26	0	1	1.00	1	1	0	0	0	0
................................................................................................................AATGGTCCTTATGGCTGGTTCTGGTT...............................	26	1	1	1.00	1	1	0	0	0	0
.................................................CCACTCATAAACACCGGGAGACACT...............................................................................................	25	2	1	1.00	1	1	0	0	0	0
......TCTCCGTAGCGGGCCACAGCGTTCGC.........................................................................................................................................	26	1	1	1.00	1	1	0	0	0	0
.................................................CGACTCATAAACACCAAGAGACACT...............................................................................................	25	1	1	1.00	1	1	0	0	0	0
...............................................................................................................GAATGGTCCTTATGGCTG........................................	18	0	1	1.00	1	1	0	0	0	0
...............................................................................TACTTCTGCACGTTTAATTTTGGT..................................................................	24	0	1	1.00	1	1	0	0	0	0
...........................................................................................................ATGTGAATGGTCCTTATGGCTGT.......................................	23	0	1	1.00	1	1	0	0	0	0
..............................................................CCAAGAGACACTTACCTTACTTCTGCAC...............................................................................	28	0	1	1.00	1	1	0	0	0	0
................................................................................................................AATGGTCCTTATGGCTGTTTCTGGTT...............................	26	0	1	1.00	1	1	0	0	0	0
..........................................................................................................................ATGGCTGTTTCTGGTTGTTTCCTCAT.....................	26	0	1	1.00	1	1	0	0	0	0
.......CTCCGTAGCGGGCCACAGCGTTC...........................................................................................................................................	23	0	1	1.00	1	1	0	0	0	0
...........................................................................................................ATGTGAATGGTCCTAATGGCTGT.......................................	23	1	1	1.00	1	1	0	0	0	0
................................................TCCATTCATAAACACCAAGAGACACT...............................................................................................	26	1	1	1.00	1	1	0	0	0	0
...............................CACAAAAGTGCGAGAAGTCCACT...................................................................................................................	23	0	1	1.00	1	1	0	0	0	0
..........................................................................TACCTTACTTCTGCACGTTTAATTTTGGT..................................................................	29	0	1	1.00	1	1	0	0	0	0
................................................TCCACTCATAAACACCAAGACACACT...............................................................................................	26	1	1	1.00	1	1	0	0	0	0
.....................................................ACATAAACACCAAGAGACACTTACCTTAC.......................................................................................	29	1	1	1.00	1	1	0	0	0	0
...................................................................................TCTGCACGTTTAATTTTAGTAAAAAT............................................................	26	1	1	1.00	1	1	0	0	0	0
........TCCGTAGCGGGCCACAGCGTTCGC.........................................................................................................................................	24	0	1	1.00	1	1	0	0	0	0
....................................................................GACACTTACCTTACTTCTGCACGTTT...........................................................................	26	0	1	1.00	1	1	0	0	0	0
........TCCGTAGCGGGCCACAGCGTTCGCAC.......................................................................................................................................	26	0	1	1.00	1	1	0	0	0	0
.....................ACAGCGTTCGCACAAAAGTGCGAG............................................................................................................................	24	0	1	1.00	1	1	0	0	0	0
...............................................GTCAACTCATAAACACCAAGAGACACT...............................................................................................	27	1	1	1.00	1	1	0	0	0	0
.............................................AAGTCCACTCATAAACACCGAGAGACACT...............................................................................................	29	1	1	1.00	1	0	1	0	0	0
..........................................................................TACCTTACTTCTGCACGTTTAA.........................................................................	22	0	1	1.00	1	1	0	0	0	0
.................GGCCACAGCGTTCGCACAAAAGTGCGA.............................................................................................................................	27	0	1	1.00	1	1	0	0	0	0
....GACCTCCGTAGCGGGCCACAG................................................................................................................................................	21	0	1	1.00	1	1	0	0	0	0
.......................................................................................................AAAGATGTGAATGGTCCTTATGGCTGT.......................................	27	1	1	1.00	1	1	0	0	0	0
..................................AAAAGTGCGAGAAGTCCACTCATAAAC............................................................................................................	27	0	1	1.00	1	1	0	0	0	0
..................................................................................................TGGGTCACAATGTGAATGGT...................................................	20	3	2	1.00	2	0	0	0	2	0
................................................TCCACTCATAAACACCAAGAGACACTC..............................................................................................	27	1	1	1.00	1	1	0	0	0	0
.......CTCCGTAGCGGGCCACAGCG..............................................................................................................................................	20	0	1	1.00	1	1	0	0	0	0
.............................................................................................................GTGAATGGTCCTTATGGCTGT.......................................	21	0	1	1.00	1	1	0	0	0	0
.............................................................................CTTACTTCTGCACGTTTGATTTTGGT..................................................................	26	1	1	1.00	1	1	0	0	0	0
.....................................AGTGCGAGAAGTCCACTCATAAACACC.........................................................................................................	27	0	1	1.00	1	1	0	0	0	0
......CCTCCGTAGCGGGCCACAGCGT.............................................................................................................................................	22	0	1	1.00	1	1	0	0	0	0
...............................................................................................................GAATGGTCCTTATGGCTGTTTCTGGT................................	26	0	1	1.00	1	1	0	0	0	0
......................................................................................................................CCTTATGGCTGTTTCTGTTTGTTTCCT........................	27	1	1	1.00	1	1	0	0	0	0
..............................................AGTCCACTCATAAACACCAGGAGACACT...............................................................................................	28	1	1	1.00	1	1	0	0	0	0
................................................TCAACTCATAAACACCAAGAGACACT...............................................................................................	26	1	1	1.00	1	1	0	0	0	0
................................................................................................................AATGGTCCTTATGGCTGTTTCTGGT................................	25	0	1	1.00	1	1	0	0	0	0
...................................................................AGACACTTACCTTACTTCTGCACGTTT...........................................................................	27	0	1	1.00	1	1	0	0	0	0
.......................................................................................................AAAAATGTGAATGGTCCTTATGGCTG........................................	26	0	1	1.00	1	1	0	0	0	0
...........................................................................ACCTTACTTCTGCACGTTTAATTTT.....................................................................	25	0	1	1.00	1	1	0	0	0	0
...................................................................................TCTGCACGTTTAATTTTGGTAAAAATGT..........................................................	28	0	1	1.00	1	1	0	0	0	0
.................................................CCACTCATAAACACCATGAGACACT...............................................................................................	25	1	1	1.00	1	1	0	0	0	0
..............................................................................................................................................CCTCATAACCTGATCGACGCCGGCC..	25	0	1	1.00	1	1	0	0	0	0
.................................................................................................................ATGGTCCTTATGGCTGTTTCTGGT................................	24	0	1	1.00	1	1	0	0	0	0
...................................................................................................................GGTCCTTATGGCTGTTTCTGGTTGT.............................	25	0	6	0.50	3	3	0	0	0	0
............................................................................................................................................TCCCTCATAACCAGATCGACGCCGGCCT.	28	2	2	0.50	1	1	0	0	0	0
.................................................................................................TTTGGTATAAATGTGGATTGT...................................................	21	3	2	0.50	1	0	0	0	1	0
................................................TCCACTCATAAACACCAAGAGACA.................................................................................................	24	0	4	0.50	2	2	0	0	0	0
...............................................................................................................................................CTCATAACCTGATCGACGCCGGCCT.	25	0	4	0.50	2	2	0	0	0	0
.............AGCGGGCCACAGCGTTCGCACAAAAG..................................................................................................................................	26	0	6	0.50	3	3	0	0	0	0
................................................TCCACTCATAAACACCAAGAG....................................................................................................	21	0	5	0.40	2	2	0	0	0	0
...............CGGGCCACAGCGTTCGCACAAAAGTG................................................................................................................................	26	0	6	0.33	2	2	0	0	0	0
................GGGCCACAGCGTTCGCACAAAAGT.................................................................................................................................	24	0	6	0.33	2	2	0	0	0	0
.............AGCGGGCCACAGCGTTCGCACAAAA...................................................................................................................................	25	0	6	0.33	2	2	0	0	0	0
.............................................AAGTTCACTCATAAAAACTAAGAGACACT...............................................................................................	29	3	3	0.33	1	1	0	0	0	0
..............GCGGGCCACAGCGTTCGCACAAAAGT.................................................................................................................................	26	0	6	0.33	2	2	0	0	0	0
................................................TCCACTCATAAACACCAAGAGACAT................................................................................................	25	1	4	0.25	1	1	0	0	0	0
................................................................................................................................................TCATAACCTGATCGACGCCGGCCT.	24	0	4	0.25	1	1	0	0	0	0
.................................................................................................................................................CATAACCTGATCGACGCCGGCCT.	23	0	4	0.25	1	1	0	0	0	0
................................................TCCACTCATAAACACCGAGAGACAC................................................................................................	25	1	4	0.25	1	1	0	0	0	0
.................................................CCACTCATAAACACCAAGACACC.................................................................................................	23	2	4	0.25	1	1	0	0	0	0
................................................TCCACTCATAAACACCTAGAGACAC................................................................................................	25	1	4	0.25	1	1	0	0	0	0
..............................................AGTCCACTCATAAACACCAAGAGACA.................................................................................................	26	0	4	0.25	1	1	0	0	0	0
..............................................AGTCCACTCATAAACACCAAGAGACAC................................................................................................	27	0	4	0.25	1	1	0	0	0	0
............................................GAAGTCCACTCATAAACACCAAGAGA...................................................................................................	26	0	4	0.25	1	1	0	0	0	0
.................................................CCACTCATAAACACCAAGAGAC..................................................................................................	22	0	4	0.25	1	1	0	0	0	0
...............................................GTCCACTCATAAACACCAAGAGACAC................................................................................................	26	0	4	0.25	1	1	0	0	0	0
.................................................CCACTCATAAACACCGAGAGACAC................................................................................................	24	1	4	0.25	1	1	0	0	0	0
..................GCCACAGCGTTCGCACAA.....................................................................................................................................	18	0	13	0.23	3	0	3	0	0	0
................GGGCCACAGCGTTCGCACAAAAGTGC...............................................................................................................................	26	0	5	0.20	1	1	0	0	0	0
................................................TCCACTCATAAACACCAAG......................................................................................................	19	0	5	0.20	1	0	1	0	0	0
.......................TGCGGTCGCACAAAAGTG................................................................................................................................	18	2	11	0.18	2	2	0	0	0	0
..................GCCACAGCGTTCGCACAAAAGT.................................................................................................................................	22	0	6	0.17	1	1	0	0	0	0
.............AGCGGGCCACAGCGTTCGGACAAAAGT.................................................................................................................................	27	1	6	0.17	1	1	0	0	0	0
...............CGGGCCACAGCGTTCACACAAAAG..................................................................................................................................	24	1	6	0.17	1	1	0	0	0	0
..................................................................................................................CGGTCCTTATGGCTGTTTCTGGTTGT.............................	26	1	6	0.17	1	1	0	0	0	0
.............AGCGGGCCACAGCGTTCGCACAAAAGTC................................................................................................................................	28	1	6	0.17	1	1	0	0	0	0
...............CGGGCCACAGCGTTCGCACAAAA...................................................................................................................................	23	0	6	0.17	1	1	0	0	0	0
...............CGGGCCACAGCGTTCGCACAAAAG..................................................................................................................................	24	0	6	0.17	1	1	0	0	0	0
..................GCCACAGGGCTCCCACAAAAG..................................................................................................................................	21	3	8	0.13	1	0	0	0	1	0
........................GCGGTCGCACAAAAGTGG...............................................................................................................................	18	2	11	0.09	1	1	0	0	0	0
...............CGGGCCACAGCGTTCGCACAA.....................................................................................................................................	21	0	13	0.08	1	1	0	0	0	0
.................GGCCACAGCGTTCGCACAAA....................................................................................................................................	20	0	13	0.08	1	1	0	0	0	0
.............AGCGGGCCACAGCGTTCGCA........................................................................................................................................	20	0	13	0.08	1	1	0	0	0	0
...............CGGGCCACAGCGTTCGCACAAA....................................................................................................................................	22	0	13	0.08	1	1	0	0	0	0

TGCTGACCTCCGTAGCGGGCCACAGCGTTCGCACAAAAGTGCGAGAAGTCCACTCATAAACACCAAGAGACACTTACCTTACTTCTGCACGTTTAATTTTGGTAAAAATGTGAATGGTCCTTATGGCTGTTTCTGGTTGTTTCCTCATAACCTGATCGACGCCGGCCTA
**************************************************((((((....((((((.....((.(((.........))).))......))))))......))))))...**************************************************

Read size

# Mismatch

Hit Count

Total Norm

Total

M042
female body

M021
embryo

V042
embryo

V057
head

V111
male body

................................................TCCACTCATAAACACCAAGAGACACT...............................................................................................

138.00

138

120

.................................................CCACTCATAAACACCAAGAGACACT...............................................................................................

80.00

..............................................AGTCCACTCATAAACACCAAGAGACACT...............................................................................................

23.00

.......................................................................................................AAAAATGTGAATGGTCCTTATGGCTGT.......................................

18.00

...............................................GTCCACTCATAAACACCAAGAGACACT...............................................................................................

13.00

................................................TCCACTCATAAACACCAAGAGACAC................................................................................................

9.50

................................................TCCACTCATAAACACCAGGAGACACT...............................................................................................

7.00

..............................................................................................................................................CCTCATAACCTGATCGACGCCGGCCT.

5.00

.............................................AAGTCCACTCATAAACACCAAGAGACACT...............................................................................................

4.00

.............................................................................CTTACTTCTGCACGTTTAATTTTGGT..................................................................

4.00

........................................................................................................AAAATGTGAATGGTCCTTATGGCTGT.......................................

3.00

..........................................................................TACCTTACTTCTGCACGTTTAAT........................................................................

3.00

...................................................................................TCTGCACGTTTAATTTTGGTAAAAAT............................................................

3.00

..................................................CACTCATAAACACCAAGAGACACT...............................................................................................

3.00

................................................TCCACTCATAAACACCAAGAGACACTT..............................................................................................

3.00

.................................................CCACTCATAAACACCAAGAGACAC................................................................................................

2.50

.................................................CCACTCATAAACACCAAGAGACACTT..............................................................................................

2.00

.........................................................................................................AAATGTGAATGGTCCTTATGGCTGT.......................................

2.00

...........GTAGCGGGCCACAGCGTTCGCAC.......................................................................................................................................

2.00

.................................................................................GTTCTGCACGTTTAATTTTGGTAAAAAT............................................................

2.00

...........GTAGCGGGCCACAGCGTTCGC.........................................................................................................................................

2.00

............................................................................................................................................TTCCTCATAACCTGATCGACGCCGGCCT.

2.00

......................................................................................................TAAAAATGTGAATGGTCCTTATGGCTGT.......................................

2.00

............................................................................CCTTACTTCTGCACGTTTAATTTTGGT..................................................................

2.00

.......................................................................................................AAAAATGTGAATGGTCCTGATGGCTGT.......................................

2.00

.................................................CCACTCATAAACACCAGGAGACACT...............................................................................................

2.00

...............CGGGCCACAGCGTTCGCACAAAAGT.................................................................................................................................

1.33

.............AGCGGGCCACAGCGTTCGCACAAAAGT.................................................................................................................................

1.33

.........................................................................................................AAAAGTGAATGGTCCTTATGGCTGT.......................................

1.00

.............................................AAGTCCACTCATAAACACCAGGAGACACT...............................................................................................

1.00

......CCTCCGTAGCGGGCCACAGCGTTCGCAC.......................................................................................................................................

1.00

.........................................................................TTACCTTACTTCTGCACGTTTAAT........................................................................

1.00

..........................................................................................................................ATGGCTGTTTCTGGTTGTTT...........................

1.00

............................................................................CCTTACTTCTGCACGTTTAAT........................................................................

1.00

.................................................................................................TTTGGTAAAAATGTGAATGGTCCTTAT.............................................

1.00

................................................TCCACTCATAAACACCACGAGACACT...............................................................................................

1.00

........................................................................CTTACCTTACTTCTGCACGTTTAAT........................................................................

1.00

.............................CGCACAAAAGTGCGAGAAGTCCACTCAT................................................................................................................

1.00

....................................................................................CTGCACGTTTAATTTTGGTAAAAATGT..........................................................

1.00

....................CACAGCGTTCGCACAAAAGTGCGA.............................................................................................................................

1.00

.................................................CCACTCATAAACACCAAGAGACACTTA.............................................................................................

1.00

.......................................................................................................AAGAATGTGAATGGTCCTTATGGCTGT.......................................

1.00

...............................................................................GACTTCTGCACGTTTAATTTTGGT..................................................................

1.00

.................................................................AGAGACACTTACCTTACTTCTGCACG..............................................................................

1.00

................................................................................................................AATGGTCCTTATGGCTGGTTCTGGTT...............................

1.00

.................................................CCACTCATAAACACCGGGAGACACT...............................................................................................

1.00

......TCTCCGTAGCGGGCCACAGCGTTCGC.........................................................................................................................................

1.00

.................................................CGACTCATAAACACCAAGAGACACT...............................................................................................

1.00

...............................................................................................................GAATGGTCCTTATGGCTG........................................

1.00

...............................................................................TACTTCTGCACGTTTAATTTTGGT..................................................................

1.00

...........................................................................................................ATGTGAATGGTCCTTATGGCTGT.......................................

1.00

..............................................................CCAAGAGACACTTACCTTACTTCTGCAC...............................................................................

1.00

................................................................................................................AATGGTCCTTATGGCTGTTTCTGGTT...............................

1.00

..........................................................................................................................ATGGCTGTTTCTGGTTGTTTCCTCAT.....................

1.00

.......CTCCGTAGCGGGCCACAGCGTTC...........................................................................................................................................

1.00

...........................................................................................................ATGTGAATGGTCCTAATGGCTGT.......................................

1.00

................................................TCCATTCATAAACACCAAGAGACACT...............................................................................................

1.00

...............................CACAAAAGTGCGAGAAGTCCACT...................................................................................................................

1.00

..........................................................................TACCTTACTTCTGCACGTTTAATTTTGGT..................................................................

1.00

................................................TCCACTCATAAACACCAAGACACACT...............................................................................................

1.00

.....................................................ACATAAACACCAAGAGACACTTACCTTAC.......................................................................................

1.00

...................................................................................TCTGCACGTTTAATTTTAGTAAAAAT............................................................

1.00

........TCCGTAGCGGGCCACAGCGTTCGC.........................................................................................................................................

1.00

....................................................................GACACTTACCTTACTTCTGCACGTTT...........................................................................

1.00

........TCCGTAGCGGGCCACAGCGTTCGCAC.......................................................................................................................................

1.00

.....................ACAGCGTTCGCACAAAAGTGCGAG............................................................................................................................

1.00

...............................................GTCAACTCATAAACACCAAGAGACACT...............................................................................................

1.00

.............................................AAGTCCACTCATAAACACCGAGAGACACT...............................................................................................

1.00

..........................................................................TACCTTACTTCTGCACGTTTAA.........................................................................

1.00

.................GGCCACAGCGTTCGCACAAAAGTGCGA.............................................................................................................................

1.00

....GACCTCCGTAGCGGGCCACAG................................................................................................................................................

1.00

.......................................................................................................AAAGATGTGAATGGTCCTTATGGCTGT.......................................

1.00

..................................AAAAGTGCGAGAAGTCCACTCATAAAC............................................................................................................

1.00

..................................................................................................TGGGTCACAATGTGAATGGT...................................................

1.00

................................................TCCACTCATAAACACCAAGAGACACTC..............................................................................................

1.00

.......CTCCGTAGCGGGCCACAGCG..............................................................................................................................................

1.00

.............................................................................................................GTGAATGGTCCTTATGGCTGT.......................................

1.00

.............................................................................CTTACTTCTGCACGTTTGATTTTGGT..................................................................

1.00

.....................................AGTGCGAGAAGTCCACTCATAAACACC.........................................................................................................

1.00

......CCTCCGTAGCGGGCCACAGCGT.............................................................................................................................................

1.00

...............................................................................................................GAATGGTCCTTATGGCTGTTTCTGGT................................

1.00

......................................................................................................................CCTTATGGCTGTTTCTGTTTGTTTCCT........................

1.00

..............................................AGTCCACTCATAAACACCAGGAGACACT...............................................................................................

1.00

................................................TCAACTCATAAACACCAAGAGACACT...............................................................................................

1.00

................................................................................................................AATGGTCCTTATGGCTGTTTCTGGT................................

1.00

...................................................................AGACACTTACCTTACTTCTGCACGTTT...........................................................................

1.00

.......................................................................................................AAAAATGTGAATGGTCCTTATGGCTG........................................

1.00

...........................................................................ACCTTACTTCTGCACGTTTAATTTT.....................................................................

1.00

...................................................................................TCTGCACGTTTAATTTTGGTAAAAATGT..........................................................

1.00

.................................................CCACTCATAAACACCATGAGACACT...............................................................................................

1.00

..............................................................................................................................................CCTCATAACCTGATCGACGCCGGCC..

1.00

.................................................................................................................ATGGTCCTTATGGCTGTTTCTGGT................................

1.00

...................................................................................................................GGTCCTTATGGCTGTTTCTGGTTGT.............................

0.50

............................................................................................................................................TCCCTCATAACCAGATCGACGCCGGCCT.

0.50

.................................................................................................TTTGGTATAAATGTGGATTGT...................................................

0.50

................................................TCCACTCATAAACACCAAGAGACA.................................................................................................

0.50

...............................................................................................................................................CTCATAACCTGATCGACGCCGGCCT.

0.50

.............AGCGGGCCACAGCGTTCGCACAAAAG..................................................................................................................................

0.50

................................................TCCACTCATAAACACCAAGAG....................................................................................................

0.40

...............CGGGCCACAGCGTTCGCACAAAAGTG................................................................................................................................

0.33

................GGGCCACAGCGTTCGCACAAAAGT.................................................................................................................................

0.33

.............AGCGGGCCACAGCGTTCGCACAAAA...................................................................................................................................

0.33

.............................................AAGTTCACTCATAAAAACTAAGAGACACT...............................................................................................

0.33

..............GCGGGCCACAGCGTTCGCACAAAAGT.................................................................................................................................

0.33

................................................TCCACTCATAAACACCAAGAGACAT................................................................................................

0.25

................................................................................................................................................TCATAACCTGATCGACGCCGGCCT.

0.25

.................................................................................................................................................CATAACCTGATCGACGCCGGCCT.

0.25

................................................TCCACTCATAAACACCGAGAGACAC................................................................................................

0.25

.................................................CCACTCATAAACACCAAGACACC.................................................................................................

0.25

................................................TCCACTCATAAACACCTAGAGACAC................................................................................................

0.25

..............................................AGTCCACTCATAAACACCAAGAGACA.................................................................................................

0.25

..............................................AGTCCACTCATAAACACCAAGAGACAC................................................................................................

0.25

............................................GAAGTCCACTCATAAACACCAAGAGA...................................................................................................

0.25

.................................................CCACTCATAAACACCAAGAGAC..................................................................................................

0.25

...............................................GTCCACTCATAAACACCAAGAGACAC................................................................................................

0.25

.................................................CCACTCATAAACACCGAGAGACAC................................................................................................

0.25

..................GCCACAGCGTTCGCACAA.....................................................................................................................................

0.23

................GGGCCACAGCGTTCGCACAAAAGTGC...............................................................................................................................

0.20

................................................TCCACTCATAAACACCAAG......................................................................................................

0.20

.......................TGCGGTCGCACAAAAGTG................................................................................................................................

0.18

..................GCCACAGCGTTCGCACAAAAGT.................................................................................................................................

0.17

.............AGCGGGCCACAGCGTTCGGACAAAAGT.................................................................................................................................

0.17

...............CGGGCCACAGCGTTCACACAAAAG..................................................................................................................................

0.17

..................................................................................................................CGGTCCTTATGGCTGTTTCTGGTTGT.............................

0.17

.............AGCGGGCCACAGCGTTCGCACAAAAGTC................................................................................................................................

0.17

...............CGGGCCACAGCGTTCGCACAAAA...................................................................................................................................

0.17

...............CGGGCCACAGCGTTCGCACAAAAG..................................................................................................................................

0.17

..................GCCACAGGGCTCCCACAAAAG..................................................................................................................................

0.13

........................GCGGTCGCACAAAAGTGG...............................................................................................................................

0.09

...............CGGGCCACAGCGTTCGCACAA.....................................................................................................................................

0.08

.................GGCCACAGCGTTCGCACAAA....................................................................................................................................

0.08

.............AGCGGGCCACAGCGTTCGCA........................................................................................................................................

0.08

...............CGGGCCACAGCGTTCGCACAAA....................................................................................................................................

0.08

Species	Coordinate	ID	Alignment
droPer2	scaffold_173:17750-17918 -	dpe_904	ACGACTGGAGGCATCGCCCGGTGTCGCAAGCGTGTTTTCACGCTCTTCAGGTGAGTATTTGTGGTTCTCTGTGAATGGAATGAAGACGTGCAAATTAAAACCATTTTTACACTTACCAGGAATACCGACAAA---------------GACCAACAAAGGAGTATTGGACTAGCTGCGGCCGGAT
dp5	Unknown_singleton_2346:1181-1364 +		ACGACTGGAGGCATCGCCCGGTGTTGCAAGCGTGTTTTCACGCGCTTCAGGTGAGTATTTGTGGTTCTCTGTGGATGGAATGAAGGCGTGCAAATTAAAACCATTTTTACACTCACCAGGAATATCGACAAATACAGGAATACTACCGACCAACACGGGAGTATTGGACTAGCTGTGGCCGGAT

Species

Coordinate

Alignment

droPer2

scaffold_173:17750-17918 -

dpe_904

ACGACTGGAGGCATCGCCCGGTGTCGCAAGCGTGTTTTCACGCTCTTCAGGTGAGTATTTGTGGTTCTCTGTGAATGGAATGAAGACGTGCAAATTAAAACCATTTTTACACTTACCAGGAATACCGACAAA---------------GACCAACAAAGGAGTATTGGACTAGCTGCGGCCGGAT

dp5

Unknown_singleton_2346:1181-1364 +

ACGACTGGAGGCATCGCCCGGTGTTGCAAGCGTGTTTTCACGCGCTTCAGGTGAGTATTTGTGGTTCTCTGTGGATGGAATGAAGGCGTGCAAATTAAAACCATTTTTACACTCACCAGGAATATCGACAAATACAGGAATACTACCGACCAACACGGGAGTATTGGACTAGCTGTGGCCGGAT

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droPer2

ACGACTGGAGGCATCGCCCGGTGTCGCAAGCGTGTTTTCACGCTCTTCAGGTGAGTATTTGTGGTTCTCTGTGAATGGAATGAAGACGTGCAAATTAAAACCATTTTTACACTTACCAGGAATACCGACAAA---------------GACCAACAAAGGAGTATTGGACTAGCTGCGGCCGGAT	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
................................................................TTCTCTGTGAATGGAATGAAGG..................................................................................................	22	4	2.00	8	0	8	0	0	0	0
..........................................................................................................................TACCGACAAA---------------GACCAACAAAGGAGTATT...................	28	1	1.00	1	0	1	0	0	0	0
........................................................................................................................AATACCGACAAA---------------GACCAACAAAGG.........................	24	1	1.00	1	0	1	0	0	0	0
................................................................TTCTCTGTGAATGGAATGAAGACG................................................................................................	24	1	1.00	1	0	1	0	0	0	0
........................................................................................................................AATACCGACAAA---------------GACCAACAAAGGA........................	25	1	1.00	1	0	1	0	0	0	0
.................................................................TCTCTGTGAATGGAATGAAGACGTGC.............................................................................................	26	1	1.00	1	0	1	0	0	0	0
.........................................................................................................................................................CAAAGGAGTATTGGACTAGCTGC........	23	1	1.00	1	0	1	0	0	0	0
.CGACTGGAGGCATCGCCCG....................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0
................................................................TTCTCTGTGAATGGAATGAAGACGTGA.............................................................................................	27	1	1.00	1	0	1	0	0	0	0
.................................................................TCTCTGTGAATGGAATGAAGG..................................................................................................	21	4	0.25	1	0	1	0	0	0	0

dp5

ACGACTGGAGGCATCGCCCGGTGTTGCAAGCGTGTTTTCACGCGCTTCAGGTGAGTATTTGTGGTTCTCTGTGGATGGAATGAAGGCGTGCAAATTAAAACCATTTTTACACTCACCAGGAATATCGACAAATACAGGAATACTACCGACCAACACGGGAGTATTGGACTAGCTGTGGCCGGAT	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
.................................GTTTTCACGCGCTTCAGGTGAGT................................................................................................................................	23	2	0.50	1	0	1	0	0	0	0	0	0	0	0
...............................................CAGGTGAGTATTTGTGAA.......................................................................................................................	18	12	0.08	1	0	1	0	0	0	0	0	0	0	0

dpe_904

scaffold_173:17800-17868 -

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads