ID:

dpe_896

 Coordinate:

scaffold_17:1404370-1404424 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-6.2 -5.9 -5.7

Flybase annnotation

CDS [Dper\GL20396-cds]; CDS [Dper\GL20396-cds]; exon [dper_GLEANR_22734:1]; exon [dper_GLEANR_22734:2]; intron [Dper\GL20396-in]

No Repeatable elements found

mature
  1. scaffold_444:6060-6081 +
  2. scaffold_11:770279-770300 -
  3. scaffold_11:801565-801586 -
  4. dpe_896  scaffold_17:1404382-1404403 +
  5. scaffold_10839:584-605 -
star

Sense Strand Reads

##################################################-------------------------------------------------------##################################################
CTGAGAGGCACGCGTCCCGCGGACCTCGACCCCTTCGTTTTCCCCCATGGGTGATAGATTCAGCGACTACTCTAGGCCCCGCGACGCGACCCCCGACCTCCGCAGGCCCATCAACACCGACGAAGACAGTCACGATGAGGACACAAGTCGCCATG
**************************************************............(((.....((..((...(((...)))..))..))....)))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 V111
male body		 M021
embryo
 V057
head
........................................................................................................................CGAAGACAGTCACGATGAGG............... 20 0 1 4.00 4 0 4 0 0
..............................................................GCGACTACTCTAGGCCCCGCGA....................................................................... 22 0 5 2.80 14 13 1 0 0
..............................................................GCGACTACTCTAGGCCCCGCGACG..................................................................... 24 0 5 2.80 14 14 0 0 0
..................................................................................................................CACCGACGAAGACAGTCACGATG.................. 23 0 1 2.00 2 2 0 0 0
.....................................................................................................................CGACGAAGACAGTCACGATGAGG............... 23 0 1 2.00 2 1 1 0 0
............................ACCCCTTCGTTTTCCCCCATG.......................................................................................................... 21 0 2 1.50 3 3 0 0 0
..............................................................GCGACTACTCTAGGCCCCGCGAC...................................................................... 23 0 5 1.40 7 7 0 0 0
....................................................................................................................CCGACGAAGACAGTCACGATGAGG............... 24 0 1 1.00 1 0 1 0 0
...........................................................................................................................AGACAGTCACGATGAGGACACAA......... 23 0 1 1.00 1 0 1 0 0
......................................................................................................................GACGAAGACAGTCACGATGAGGA.............. 23 0 1 1.00 1 0 1 0 0
..............................................................................................................TCAACACCGACGAAGACAGT......................... 20 0 1 1.00 1 0 1 0 0
.............................................................................................................................ACAGTCACGATGAGGACACAAGTCGCCA.. 28 0 1 1.00 1 0 1 0 0
..................................................................................................................CACCGACGAAGACAGTCACGAT................... 22 0 1 1.00 1 1 0 0 0
.................................................................................................................................TCACGATGAGGACACAAGTC...... 20 0 1 1.00 1 0 1 0 0
.TGAGAGGCACGCGTCCCGCGGA.................................................................................................................................... 22 0 1 1.00 1 1 0 0 0
..........................................................................................................CCCATCAACACCGACGAAGACAGTCACGA.................... 29 0 1 1.00 1 0 1 0 0
..........................................................................................................................AAGACAGTCACGATGAGGAC............. 20 0 1 1.00 1 0 1 0 0
....................................................................................................................CCGACGAAGACAGTCACGATGAGGA.............. 25 0 1 1.00 1 0 1 0 0
..................................................................................................................CACCGACGAAGGCAGTCACGATG.................. 23 1 1 1.00 1 1 0 0 0
..............................................................GCGACTACTCTAGGCCCCGCGACGC.................................................................... 25 0 5 0.80 4 4 0 0 0
..............................................................GCGACTACTCTAGGCCCCGC......................................................................... 20 0 5 0.80 4 3 0 1 0
..............................................................GCGACTACTCTAGGCCCCGCG........................................................................ 21 0 5 0.60 3 3 0 0 0
........................CTCGACCCCTTCGTTTTCCCC.............................................................................................................. 21 0 2 0.50 1 1 0 0 0
.....................................TTTTCCCCCATGGGTGATA................................................................................................... 19 0 2 0.50 1 1 0 0 0
.......................................TTCCCCCATGGGTGATAGATT............................................................................................... 21 0 2 0.50 1 1 0 0 0
.............................CCCCTTCGTTTTCCCCCATG.......................................................................................................... 20 0 2 0.50 1 1 0 0 0
.........................TCGACCCCTTCGTTTTCCCCCATGGG........................................................................................................ 26 0 2 0.50 1 1 0 0 0
..................................TCGTTTTCCCCCATGGGTG...................................................................................................... 19 0 2 0.50 1 1 0 0 0
...............................CCTTCGTTTTCCCCCATGGGTGATAGAT................................................................................................ 28 0 2 0.50 1 1 0 0 0
.................................TTCGTTTTCCCCCATGGGTG...................................................................................................... 20 0 2 0.50 1 1 0 0 0
........................CTCGACCCGTTCGTTTTCCCCCATGGG........................................................................................................ 27 1 2 0.50 1 1 0 0 0
..................................TCGTTTTCCCCCATGGGTGATT................................................................................................... 22 1 2 0.50 1 1 0 0 0
.................................TTCGTTTTCCCCCATGGGTGATAGAT................................................................................................ 26 0 2 0.50 1 1 0 0 0
.................................TTCGTTTTCCCCCATGGGTGAT.................................................................................................... 22 0 2 0.50 1 1 0 0 0
..............................................................GCGACTACGCTAGGCCCCGCGACG..................................................................... 24 1 5 0.40 2 2 0 0 0
..............................................................GCGACTACTCTAGGCCCCGCTAC...................................................................... 23 1 5 0.20 1 1 0 0 0
..............................................................GCGACTACTCAAGGCCCCGCGACG..................................................................... 24 1 5 0.20 1 1 0 0 0
............................................................CAGCGACTCCTCTAGGCCCCG.......................................................................... 21 1 5 0.20 1 1 0 0 0
...........................................................TCAGCGACTACTCTAGGCCCCGCGA....................................................................... 25 0 5 0.20 1 1 0 0 0
...........................................................TCAGCGACTACTCTAGGCCC............................................................................ 20 0 5 0.20 1 0 0 1 0
...............................................................CGACTACTCTAGGCCCCGCGACG..................................................................... 23 0 18 0.11 2 2 0 0 0
.............................................................................CCCGCGACGCGACCCCCGA........................................................... 19 0 17 0.06 1 1 0 0 0
.......................................................................CTAGGCCCCGGGAGGCGTCC................................................................ 20 3 18 0.06 1 0 0 0 1
...............................................................CGACTACTCTAGGCCCCGCG........................................................................ 20 0 18 0.06 1 1 0 0 0
...............................................................CGACTACTCTAGGCCCCGCGA....................................................................... 21 0 18 0.06 1 1 0 0 0
................................................................GACTACTCTAGGCCCCGCG........................................................................ 19 0 18 0.06 1 1 0 0 0

Anti-sense strand reads

GACTCTCCGTGCGCAGGGCGCCTGGAGCTGGGGAAGCAAAAGGGGGTACCCACTATCTAAGTCGCTGATGAGATCCGGGGCGCTGCGCTGGGGGCTGGAGGCGTCCGGGTAGTTGTGGCTGCTTCTGTCAGTGCTACTCCTGTGTTCAGCGGTAC
**************************************************............(((.....((..((...(((...)))..))..))....)))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 V111
male body		 M021
embryo
 V042
embryo
 V057
head
...............................................ACCCACTATCTAAGTCGCTGATGAG................................................................................... 25 0 1 3.00 3 3 0 0 0 0
..........................................................................................................GGGTAGTTGTGGCTGCTTCT............................. 20 0 6 2.50 15 11 2 2 0 0
.........................................................................................................CGGGTAGTTGTGGCTGCTTCT............................. 21 0 6 2.17 13 11 0 2 0 0
........................................................................................................CCGGGTAGTTGTGGCTGCTTCT............................. 22 0 5 1.40 7 7 0 0 0 0
...........................................................................................................GGTAGTTGTGGCTGCTTCT............................. 19 0 6 1.33 8 1 3 2 2 0
.......................................................................................................TCCGGGTAGTTGTGGCTGCTT............................... 21 0 1 1.00 1 1 0 0 0 0
..........................................................................................................GGGTAGTTGTGGCTGCTTCTGTCAGT....................... 26 0 1 1.00 1 0 1 0 0 0
..............................GGGAAGCAAAAGGGGGTACCCGCTAT................................................................................................... 26 1 4 0.75 3 3 0 0 0 0
..........................................................................................................GGGTAGTTGTGGCTGCTT............................... 18 0 6 0.67 4 4 0 0 0 0
....................................................CTATCTAAGTCGCTGATGAG................................................................................... 20 0 6 0.67 4 1 2 1 0 0
.........................................................................................................CGGGTAGTTGTGGCTGCTT............................... 19 0 6 0.50 3 3 0 0 0 0
..........................................................................................................AGGTAGTTGTGGCTGCTTCT............................. 20 1 6 0.33 2 0 0 2 0 0
............................................................................................................GTAGTTGTGGCTGCTTCT............................. 18 0 6 0.33 2 0 0 2 0 0
..................................AGCAAAAGGGGGTACCCGCTATATAACT............................................................................................. 28 3 3 0.33 1 1 0 0 0 0
................................GAAGCAAAAGGGGGTACCCGCTAT................................................................................................... 24 1 4 0.25 1 1 0 0 0 0
..............................GGGAAGCAAAAGGGGGTGCCCGCTAT................................................................................................... 26 2 4 0.25 1 1 0 0 0 0
................................GAAGCAAAAGGGGGTACCCGCG..................................................................................................... 22 2 4 0.25 1 1 0 0 0 0
.............................GGGGAAGCAAAAGGGGGTACCCGCTAT................................................................................................... 27 1 4 0.25 1 1 0 0 0 0
..............................GGGAAGCAAAAGGGGGTACCCGCT..................................................................................................... 24 1 4 0.25 1 1 0 0 0 0
.............................GGGGAAGCAAAAGGGGGTACCCGCTA.................................................................................................... 26 1 4 0.25 1 1 0 0 0 0
.......................CGAGCGGGGGAAGCATAAGGG............................................................................................................... 21 3 4 0.25 1 0 0 0 0 1
...............................GGAAGCAAAAGGGGGTACCCGCTAT................................................................................................... 25 1 4 0.25 1 1 0 0 0 0
..........................................................AAGTCGCTGATGAGATCCGGGGCGC........................................................................ 25 0 5 0.20 1 0 1 0 0 0
..........................................................AAGTCGCTGATGAGATCCGGG............................................................................ 21 0 5 0.20 1 0 1 0 0 0
........................................................................................................CCGGGTAGTTGTGGCTGCTT............................... 20 0 5 0.20 1 1 0 0 0 0
............................................................GTCGCTGATGAGATCCGGGGCGC........................................................................ 23 0 5 0.20 1 0 1 0 0 0
...........................................................................................................GGTAGTTGTGGCCGCTTCT............................. 19 1 6 0.17 1 0 0 0 1 0
..........................................................................................................GGGTAGTTTTGGCTGCTTCT............................. 20 1 6 0.17 1 1 0 0 0 0
.........................................................................................................CGGGTAGTTGTGGCTGCT................................ 18 0 6 0.17 1 1 0 0 0 0
..........................................................................................................TGGTAGTTGTGGCTGCTTCT............................. 20 1 6 0.17 1 0 0 0 1 0
...........................................................................................................GGTAGTTGTGGCTGCTTC.............................. 18 0 6 0.17 1 1 0 0 0 0
............................TGGGGCAGCAAAAGGGCG............................................................................................................. 18 2 6 0.17 1 0 0 0 0 1
.........................................................................................................AGGGTAGTTGTGGCTGCT................................ 18 1 6 0.17 1 0 1 0 0 0
.........................................................................................................CGGGTAGTTGTGACTGCTTCT............................. 21 1 6 0.17 1 1 0 0 0 0
............................................................................................................ATAGTTGTGGCTGCTTCT............................. 18 1 6 0.17 1 0 0 1 0 0
.......................................................................................................TGCGGGTAGTGGTGGCTG.................................. 18 2 14 0.14 2 0 2 0 0 0
............................................................................GGGGCGCTGCGCTGGGGGCT........................................................... 20 0 15 0.13 2 2 0 0 0 0
..........................................................................................................AAGTAGTTGTGGCTGCTTCT............................. 20 2 8 0.13 1 1 0 0 0 0
........................................................................................................TTGGGTAGTTGTGGCTGCTT............................... 20 2 8 0.13 1 0 1 0 0 0
..............................................................................GGCGCTGCGCTGGGGGCT........................................................... 18 0 17 0.12 2 2 0 0 0 0
.....................................................................GAGATCCGGGGCGCTGCGCTG................................................................. 21 0 14 0.07 1 0 1 0 0 0
........................................................................ATCCGGGGCGCTGCGCTGGG............................................................... 20 0 14 0.07 1 1 0 0 0 0
...........................................................................TGGGGCGCTGCGCTGGGGGCT........................................................... 21 1 15 0.07 1 1 0 0 0 0
.............................................................................TGGCGCTGCGCTGGGGGCT........................................................... 19 1 17 0.06 1 1 0 0 0 0
.............................................................................GGGCGCTGCGCTGGGGGCT........................................................... 19 0 17 0.06 1 1 0 0 0 0
...............................................................GCTGATGAGATCCGGGGCGC........................................................................ 20 0 18 0.06 1 1 0 0 0 0
..................................................................AATGAGATCCGGGGCGCTGC..................................................................... 20 1 18 0.06 1 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_17:1404320-1404474 + dpe_896 CTGAGAGGCACGCGTCCCGCGGACCTCGACCCCTTCGTTTTCCCCCATGGGTGATAGATTCAGCGACTACTCTAGGCCCCGCGACGCGACCCCCGACCTCCGCAGGCCCATCAACACCGACGAAGACAGTCACGATGAGGACACAAGTCGCCATG
dp5 XL_group1a:4210309-4210441 - ---------ACGCGTCCCGCGGACCTCGACCCCTTC-TTTTCCCCCATGGGCGATAGATTCAGCGACTACTCTAGGCCCCGCGACGCGACCCCCGATCTCCGCGGGCCCATCAACACCGACGAAG------------AGGACACCAGTCGCCATG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
CTGAGAGGCACGCGTCCCGCGGACCTCGACCCCTTCGTTTTCCCCCATGGGTGATAGATTCAGCGACTACTCTAGGCCCCGCGACGCGACCCCCGACCTCCGCAGGCCCATCAACACCGACGAAGACAGTCACGATGAGGACACAAGTCGCCATGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................................................................................CGAAGACAGTCACGATGAGG...............2014.004000004
..............................................................GCGACTACTCTAGGCCCCGCGA.......................................................................2252.80140130001
..............................................................GCGACTACTCTAGGCCCCGCGACG.....................................................................2452.80140140000
..................................................................................................................CACCGACGAAGACAGTCACGATG..................2312.002020000
.....................................................................................................................CGACGAAGACAGTCACGATGAGG...............2312.002010001
............................ACCCCTTCGTTTTCCCCCATG..........................................................................................................2121.503030000
..............................................................GCGACTACTCTAGGCCCCGCGAC......................................................................2351.407070000
....................................................................................................................CCGACGAAGACAGTCACGATGAGG...............2411.001000001
...........................................................................................................................AGACAGTCACGATGAGGACACAA.........2311.001000001
......................................................................................................................GACGAAGACAGTCACGATGAGGA..............2311.001000001
..............................................................................................................TCAACACCGACGAAGACAGT.........................2011.001000001
.............................................................................................................................ACAGTCACGATGAGGACACAAGTCGCCA..2811.001000001
..................................................................................................................CACCGACGAAGACAGTCACGAT...................2211.001010000
.................................................................................................................................TCACGATGAGGACACAAGTC......2011.001000001
.TGAGAGGCACGCGTCCCGCGGA....................................................................................................................................2211.001010000
..........................................................................................................CCCATCAACACCGACGAAGACAGTCACGA....................2911.001000001
..........................................................................................................................AAGACAGTCACGATGAGGAC.............2011.001000001
....................................................................................................................CCGACGAAGACAGTCACGATGAGGA..............2511.001000001
..............................................................GCGACTACTCTAGGCCCCGCGACGC....................................................................2550.804040000
..............................................................GCGACTACTCTAGGCCCCGC.........................................................................2050.804130000
..............................................................GCGACTACTCTAGGCCCCGCG........................................................................2150.603030000
........................CTCGACCCCTTCGTTTTCCCC..............................................................................................................2120.501010000
.....................................TTTTCCCCCATGGGTGATA...................................................................................................1920.501010000
.......................................TTCCCCCATGGGTGATAGATT...............................................................................................2120.501010000
.............................CCCCTTCGTTTTCCCCCATG..........................................................................................................2020.501010000
.........................TCGACCCCTTCGTTTTCCCCCATGGG........................................................................................................2620.501010000
..................................TCGTTTTCCCCCATGGGTG......................................................................................................1920.501010000
...............................CCTTCGTTTTCCCCCATGGGTGATAGAT................................................................................................2820.501010000
.................................TTCGTTTTCCCCCATGGGTG......................................................................................................2020.501010000
..................................TCGTTTTCCCCCATGGGTGATT...................................................................................................2220.501010000
.................................TTCGTTTTCCCCCATGGGTGATAGAT................................................................................................2620.501010000
.................................TTCGTTTTCCCCCATGGGTGAT....................................................................................................2220.501010000
...........................................................TCAGCGACTACTCTAGGCCCCGCGA.......................................................................2550.201010000
...........................................................TCAGCGACTACTCTAGGCCC............................................................................2050.201100000
...............................................................CGACTACTCTAGGCCCCGCGACG.....................................................................23180.112020000
.............................................................................CCCGCGACGCGACCCCCGA...........................................................19170.061010000
...............................................................CGACTACTCTAGGCCCCGCG........................................................................20180.061010000
...............................................................CGACTACTCTAGGCCCCGCGA.......................................................................21180.061010000
................................................................GACTACTCTAGGCCCCGCG........................................................................19180.061010000
dp5
---------ACGCGTCCCGCGGACCTCGACCCCTTC-TTTTCCCCCATGGGCGATAGATTCAGCGACTACTCTAGGCCCCGCGACGCGACCCCCGATCTCCGCGGGCCCATCAACACCGACGAAG------------AGGACACCAGTCGCCATGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....................................................................................................................CCGACGAAG------------AGGACACCAGTCGC....23130.003002810100000
....................................................................................................................CCGACGAAG------------AGGACACCAGTCG.....22125.002502210110000
....................................................................................................................CCGACGAAG------------AGGACACCAGTCGCC...24123.002302120000000
...........................................................TCAGCGACTACTCTAGGCCCCGC.........................................................................23116.001601100000140
....................................................................................................................CCGACGAAG------------AGGACACCAGTCGCCA..25115.001501500000000
...........................................................TCAGCGACTACTCTAGGCCCC...........................................................................21114.001401400000000
...........................................................TCAGCGACTACTCTAGGCCCCG..........................................................................22112.001201200000000
...........................................................TCAGCGACTACTCTAGGCCC............................................................................2019.0090900000000
..............................................................GCGACTACTCTAGGCCCCGCGACG.....................................................................2417.0070700000000
.....................................................................................................................CGACGAAG------------AGGACACCAGTCGC....2217.0070700000000
...........................................................TCAGCGACTACTCTAGGCC.............................................................................1916.0060500100000
....................................................................................................................CCGACGAAG------------AGGACACCAGTC......2115.0050311000000
............................................................CAGCGACTACTCTAGGCCCCGCGA.......................................................................2414.0040000000400
.........................................................................AGGCCCCGCGACGCGACCCC..............................................................2014.0040400000000
...........................................................TCAGCGACTACTCTAGGCCCCGCGACG.....................................................................2714.0040400000000
.....................................................................................................................CGACGAAG------------AGGACACCAGTCG.....2114.0040300000100
............................................................CAGCGACTACTCTAGGCCCCG..........................................................................2113.0030300000000
........................................................................TAGGCCCCGCGACGCGACCCCCGATC.........................................................2613.0030300000000
......................................................................................CGACCCCCGATCTCCGCGGGC................................................2113.0030210000000
........................................................GATTCAGCGACTACTCTAGGCCC............................................................................2313.0030200000010
...........................................................TCAGCGACTACTCTAGGCCCCGCGA.......................................................................2513.0030300000000
....................................................................................CGCGACCCCCGATCTCCGCG...................................................2012.0020110000000
.............................................................................CCCGCGACGCGACCCCCGATCT........................................................2212.0020200000000
..............................................................................................................TCAACACCGACGAAG------------AGGACACC..........2312.0020100000100
..............................................................GCGACTACTCTAGGCCCCGCGA.......................................................................2212.0020200000000
..............................................................GCGACTACTCTAGGCCCCGC.........................................................................2012.0020200000000
.....................................................................................................................CGACGAAG------------AGGACACCAGTCGCC...2312.0020200000000
........................................TCCCCCATGGGCGATAGATTCAGCGACT.......................................................................................2812.0020200000000
...........................................CCCATGGGCGATAGATTCAGCGACTC......................................................................................2612.0020000000020
..............................................................GCGACTACTCTAGGCCCCGCGAC......................................................................2312.0020200000000
..........................................................................................................................AAG------------AGGACACCAGTCGCCATG2112.0020200000000
.......................................................................................................................ACGAAG------------AGGACACCAGTCGCC...2112.0020020000000
..................................................................................................................CACCGACGAAG------------AGGACACCAGT.......2211.0010100000000
...............................CCTTC-TTTTCCCCCATGGGC.......................................................................................................2011.0010100000000
...........................................................TCAGCGACTACTCTAGGCCAA...........................................................................2111.0010100000000
.........................TCGACCCCTTC-TTTTCCCCCATGGGCGA.....................................................................................................2811.0010100000000
..................................................................................................................CACCGACGAAG------------AGGACACCAGTCGC....2511.0010100000000
....................................................................................CGCGACCCCCGATCTCCGCGGGCCTT.............................................2611.0010100000000
...................................C-TTTTCCCCCATGGGCGATA...................................................................................................2011.0010100000000
..............................................................................................................TCAACACCGACGAAG------------AGGACAC...........2211.0010100000000
...................................................................................................................ACCGACGAAG------------AGGACACCAGTCG.....2311.0010100000000
...........................................................TCAGCGACTACTCTAGGCCCCGCGAC......................................................................2611.0010010000000
..............................................................................CCGCGACGCGACCCCCGATCT........................................................2111.0010100000000
.................................................................ACTACTCTAGGCCCCGCGACGC....................................................................2211.0010100000000
....................................................................................CGCGACCCCCGATCTCCGCGG..................................................2111.0010100000000
.......................................................................................................GGGCCCATCAACACCGACGAAG------------AGGACAC...........2911.0010100000000
................................................................GACTACTCTAGGCCCCGCG........................................................................1911.0010100000000
...............................................TGGGCGATAGATTCAGCGAC........................................................................................2011.0010100000000
.........................................................ATTCAGCGACTACTCTAGGCC.............................................................................2111.0010100000000
..................................................................................................................CACCGACGAAG------------AGGACACC..........1911.0010100000000
.............GTCCCGCGGACCTCGACCCC..........................................................................................................................2011.0010100000000
.................................................GGCGATAGATTCAGCGACT.......................................................................................1911.0010100000000
........................................................................TAGGCCCCGCGACGCGACCC...............................................................2011.0010100000000
..................................................................CTACTCTAGGCCCCGCGACGC....................................................................2111.0010010000000
..........................................................TTCAGCGACTACTCTAGGCCC............................................................................2111.0010100000000
........................................TCCCCCATGGGCGATAGATTCAGCGT.........................................................................................2611.0010100000000
...........................................................TCAGCGACTACTCTAGGCA.............................................................................1911.0010100000000
.....................................................................................................................CGACGAAG------------AGGACACCAGTCGCCA..2411.0010100000000
..............................................................GCGACTACTCTAGGCCCCGCGACGC....................................................................2511.0010100000000
......................................................................................CGACCCCCGATCTCCGCGGGCCCATC...........................................2611.0010100000000
............................................................CAGCGACTACTCTAGGCCCCGC.........................................................................2211.0010100000000
.............................................................AGCGACTACTCTAGGCCCCG..........................................................................2011.0011000000000
.................................................................................................................ACACCGACGAAG------------AGGACACCAGTCGC....2611.0010010000000
.............................................................................CCCGCGACGCGACCCCCGATC.........................................................2111.0010100000000
..........................................................................................CCCCGATCTCCGCGGGCCC..............................................1911.0010100000000
...............................................................................................................CAACACCGACGAAG------------AGGACAC...........2111.0010010000000
...........................GACCCCTTC-TTTTCCCCCAT...........................................................................................................2011.0010100000000
.........................................CCCCCATGGGCGATAGATTCAGCGA.........................................................................................2511.0010100000000
........................................................................TAGGCCCCGCGACGCGACC................................................................1921.0020110000000
......................................................TAGATTCAGCGACTACTCTAG................................................................................2111.0010100000000
......................................................TAGATTCAGCGACTACTCTAGGCCC............................................................................2511.0010100000000
..................................................................................................TCCGCGGGCCCATCAACACCGACGA................................2521.0020200000000
...............................................................CGACTACTCTAGGCCCCGCGAC......................................................................2211.0010000000010
..................................................................................................................CACCGACGAAG------------AGGACACCAGTC......2311.0010100000000
..............................................................................................................TCAACACCGACGAAG------------AGGACACCAG........2511.0010100000000
...........................................CCCATGGGCGATAGATTCAGCGACT.......................................................................................2511.0010100000000
.........................................................ATTCAGCGACTACTCTAGGC..............................................................................2011.0010100000000
............................................................................CCCCGCGACGCGACCCCCGATC.........................................................2211.0010100000000
............................................................CAGCGACTACTCTAGGCCCCA..........................................................................2111.0010100000000
..........................................................TTCAGCGACTACTCTAGGC..............................................................................1911.0010100000000
................................CTTC-TTTTCCCCCATGGGCGA.....................................................................................................2111.0010000100000
.............................................CATGGGCGATAGATTCAGCGA.........................................................................................2111.0010100000000
....................................................................................................................CCGACGAAG------------AGGACACCAGTT......2111.0010100000000
......................................................................TCTAGGCCCCGCGACGCGAC.................................................................2011.0010100000000
.......................................................................CTAGGCCCCGCGACGCGACC................................................................2021.0020110000000
...........................................................TCAGCGACTACTCTAGGCCCCGCG........................................................................2411.0010100000000
...............................................................................................................CAACACCGACGAAG------------AGGACACC..........2211.0010010000000
....................................................................................................................CCGACGAAG------------AGGACACCAG........1911.0010100000000
........................................................GATTCAGCGACTACTCTAGGCC.............................................................................2211.0010100000000
....................................................................................CGCGACCCCCGATCTCCGCGGG.................................................2211.0010100000000
.........................................................................AGGCCCCGCGACGCGACC................................................................1820.5010100000000
..................................................................................................TCCGCGGGCCCATCAACACCGACGAAG------------..................2720.5010100000000
...................................................................................................CCGCGGGCCCATCAACACCGA...................................2120.5010100000000
.......................................................................CTAGGCCCCGCGACGCGAC.................................................................1920.5010000100000
..................................................................................................TCCGCGGGCCCATCAACAA......................................1920.5010100000000
............................................................................................................CATCAACACCGACGAAG------------AGG...............2050.4020000000200
.............................................................................................................ATCAACACCGACGAAG------------AGGAC.............2130.3310000100000
............................................................................CCCCGCGACGCGACCCCC.............................................................1830.3310100000000

Generated: 06/08/2015 at 03:24 PM