ID:

dpe_893

 Coordinate:

scaffold_17:1396840-1397100 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-13.2 -12.3

Flybase annnotation

exon [dper_GLEANR_22732:3]; CDS [Dper\GL20394-cds]; exon [dper_GLEANR_22732:2]; CDS [Dper\GL20394-cds]; intron [Dper\GL20394-in]

Repeatable elements

NameClassFamilyStrand
(TG)nSimple_repeatSimple_repeat+

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AGTGTGGCGACCATGTGCTATGTCTATGCAATATTTCCCGAATTGAATGAGTGAGTAAATGCATGATGCTGATGTGTCCAAAGCGCATTCGTGCACCTGCAATGTGTGTCTACATCTGTGTGCGTGTGTGTGTGCCTGTTGGTGTGTGTGAGTCTCGGTTGATTTGCGAGAGGGTTTTATTCCACACACAAACGGCATATAGAATGATTGCCAAGTCACGCCACCTCTCACACGCACACACTCTCACCAATACCCCCACTCGGATGTGGCCTGTTTACACCTTTTTTCTCTCTGTTTTCTGTTCTCTTCAGGTCTGAGAAGCAACATTTGAAAATACCGCGTGATATACAAGATGCTAAAA
********************************************************************************************************************************************************************************......................................((((.(((((.((...................................)).))))).))...))*********************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 V111
male body		 V042
embryo
 V057
head
.................................................................................................................................................................................................................................................................ACTCGGATGTGGCCTGTTTAC................................................................................... 21 0 1 1.00 1 1 0 0 0
.........................................................................................................................................................CTCGGTTGATTTGCGAGAGGT........................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0
...............................................................................................................................................GTGTGTGAGTCTCGGTTGATC..................................................................................................................................................................................................... 21 1 1 1.00 1 0 1 0 0
................................................................................................................................................................................TTATTCCACACACAAACGG...................................................................................................................................................................... 19 0 1 1.00 1 0 0 1 0
.............................................................................................................................................................GTTGATTTGCGAGAGGGTTCC....................................................................................................................................................................................... 21 2 1 1.00 1 0 1 0 0
..............................................................ATGATGCTGATGTGTCCAAAG...................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0
.............................................................................CGACAGCGAATTCGTGCACCT....................................................................................................................................................................................................................................................................... 21 3 4 0.25 1 0 0 0 1
..................................................................................GTGCATTGCTGCACCTGCAAT.................................................................................................................................................................................................................................................................. 21 3 6 0.17 1 1 0 0 0
.....................................................................................................................TTGTGCGTGTGTCTGCGCCTGTT............................................................................................................................................................................................................................. 23 3 14 0.07 1 0 0 0 1
.................................................................................................................ATCTGTGTGCGTGTGTGTTT.................................................................................................................................................................................................................................... 20 1 20 0.05 1 0 0 0 1
.............................................................................................................................TTGTGTGTGCCGGTTGGTAT........................................................................................................................................................................................................................ 20 3 20 0.05 1 0 1 0 0

Anti-sense strand reads

TCACACCGCTGGTACACGATACAGATACGTTATAAAGGGCTTAACTTACTCACTCATTTACGTACTACGACTACACAGGTTTCGCGTAAGCACGTGGACGTTACACACAGATGTAGACACACGCACACACACACGGACAACCACACACACTCAGAGCCAACTAAACGCTCTCCCAAAATAAGGTGTGTGTTTGCCGTATATCTTACTAACGGTTCAGTGCGGTGGAGAGTGTGCGTGTGTGAGAGTGGTTATGGGGGTGAGCCTACACCGGACAAATGTGGAAAAAAGAGAGACAAAAGACAAGAGAAGTCCAGACTCTTCGTTGTAAACTTTTATGGCGCACTATATGTTCTACGATTTT
***********************************************************************************......................................((((.(((((.((...................................)).))))).))...))******************************************************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M021
embryo
 V111
male body		 M042
female body
..............................................................................................................................................................................................................................CGGAGAGTGTGCGTGTGTGAGAGTGGTTA.............................................................................................................. 29 1 1 1.00 1 1 0 0
..........................................................................................................................................................................................................................................GTGTGTGAGAGTGGTTATGGGGGTGAG.................................................................................................... 27 0 1 1.00 1 0 1 0
.................................................................................................................................................................................................................................................................................................................................................GCGCACTATATGTTCTACGATT.. 22 0 1 1.00 1 0 0 1
..............................................................................................................................................................................................................................TGGAGAGTGTGCGTGTGTGAGAGTGGTTA.............................................................................................................. 29 0 1 1.00 1 1 0 0
............................................................................................................................................................................................................................................TTGTGAGACTGGTTGTGGGGG........................................................................................................ 21 3 20 0.05 1 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_17:1396790-1397150 + dpe_893 AGTGTGGCGACCATGTGCTATGTCTATGCAATATTTCCCGAATTGAATGAGTGAGTAAATG---------CA----------------------------------------------------------------------TGATGCTGATGTGTCCAAAGCGCATTCGTGCACCTG--CAATGTGTGTC-T---ACATCTGT----------------------------------------GTGC-GTGTGTGTGTGCCTGTTGGTGTG--TGTGA---GTCT---CGGTTGATTTGCGAGAGGGTTTTAT----TCCACACACAAA-----------------------------------CGGCA-TATA-GA-----------------------------------------------------------------ATGATTGCC-AAGTCACGCCAC------------------------------------------------------------------------------CTCT------------------CACACG-------CACAC----------A--CTCTCAC-CAATACCCCCACTCGGATG---------------------------------------------------------------------TGG-CCTGTTTACACCTTTTTTCTCTCTGT---------TTTCTGTTCTCTTCAGGTCTGAGAAGCAACATTTGAAAATACCGCGTGATATACAAGATGCTAAAA
dp5 XL_group1e:4453860-4454220 + AGTGTGGCGACCATGTGCTATGTCTATGCAATATTTCCCGAATTGAATGAGTGAGTAAATG---------CA----------------------------------------------------------------------TGATGCTGATGTGTCCAAAGCGCATTCGTGCACCTG--CAATGTGTGTC-T---ACATCTGT----------------------------------------GTGC-GTGTGTGTGTGCCTGTTGGTGTG--TGTGA---GTCT---CGGTTGATTTGCGAGAGGGTTTTAT----TCCACACACAAA-----------------------------------CGGCA-TATA-GA-----------------------------------------------------------------ATGATTGCC-AAGTCACGCCAC------------------------------------------------------------------------------CTCT------------------CACACG-------CACAC----------A--CTCACAC-CAATACCCCCACTCGGATG---------------------------------------------------------------------TGG-CCTGTTTACACCTTTTTTCTCTCTGT---------TTTCTGTTCTCTTCAGGTCTGAGAAGAAACATTTGAAAATACCGCGTGATATACAAGATGCTAAAA
droWil2 scf2_1100000004909:10189714-10190124 - AGTTTGGCCACAATGTGCTATGTCTATGCCATATTCCCGGAATTAAATGCGTAAGTT--TAAGGACTCAAAG------AAAAAAAACAAGAACAAAAACAACAACAAAACATGCAGACGCAGACGCAGTGGC----AAAGGCGGAGGCTGATGTGTTGCCAATTTATTGCT----------------------------------------------------------------------------------------------------------------------CA--------------------------------------------------------------------------------------------------------------------------------------------------------------GCC-AAGTCACGCCACCTTTTTCACTCGCA----------------------------------------CACTAACACACACACACACAC------A------------------C--AC-ACACACACACACACACAC--ACACACACACACA-----------CACAGACA----------CACGAAACACACCGAGAGAATTATTTACAACTAACT-TGTTTGTATGCTTGAGTATATGT----AACTCTCCGCCTTCTCTCTCCCCCTCTCTT--TCTCGCATGTGTTTGCAGGGCCGAGAAACAGCATTTGAAAATACCTCGTGATATACAAGATGCTAAAA
droVir3 scaffold_13049:2792940-2793199 - AGCGTGTATGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T---GTGTGTGTGTGTGTGTGTGTGCGGCTCACTGTCAGTTGTTGTTTATTTGTG-------------------------------------CT---AAGCCAATTTGCTTTGAGATTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------CGCCTGCAACAGCAACAATGATAAATCAATAAACTTGCAAAGTCGCGGCTT---------------------TGGCACGTGTCGCGCTGCCTGCAGCGAA-------CGC------------A--AACGCAGC---TGCA-----------------------------------------------------------------------------AAT-TGC-ATTGTTTGCATTTTATTTATCTTC-----TTC-----TTTG--CTTTTAATG-CTAAATAACAACAAC-AATAATAATGCGCG-----------------A
droMoj3 scaffold_6496:6106715-6106974 - AATATATCCCTG-------------------------------TCAACAGCTGACTAACTG---------AA----------------------------------------------------------------------TGTTAATGCTATGTT--ATGTTCACTCGTATAACTGTTCGACTCTTATA-T---ATATTTGC----------------------------------------CCATAATATGTGTAGAAATGTTAACGAC--CTTCA---ATCTTAACAGTCAGTTCGCGAAAAA--------------------TC----------ACTTTTAATTATACGCCATAAATAAATGTCAATGTT-TA-----------------------------------------------------------------TTGACT-TT-ATCTCACTC----------------------------------------------------------------------------TCCACTTCA------------------CACACA-------CACAC----------A--CATACAC-TAGCACTTCCAATCAATAG---------------------------------------------------------------------CG---CTGTTT--------------------------------------------------------------------------------------------GC
droGri2 scaffold_15203:9770428-9770782 - AGTCTGCTAGCCATGTTCTATGTCTATGCAATATTTCCCGAATTGAATGCGTGAGTA--T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGAGTTGA-TCACA----CACACACACACACACACATATA-------------------------C--------ACACTTGATTTATATTATTGAAAATGTTACCAGCTGTGCTTGTGGTGCGCTTTGAGCTTGTTTGTGTGCTT--GACTC-AAGTCACGCCAC------------------------------------------------------------------------------TTTG------------------CATTCA-------CACAC----------A--CACACAC-A-ACAC----AGTCAGATCAACTCTCGTGCATGTATTACA---AATGTATTTAATGTATCTAATTGTGTATGTGTGTGTGTGTGGTTGT----TAC-------------------------------TTTTTACTTTTTACAGCACTGAGAAGCAACATTTGAAAATACCACGTGATATACAAGATGCTAAGA
droAna3 scaffold_13248:1833991-1834201 + AGTGTGGCTACCATGTTCTATGTCTACGCTATATTCCCCGAGCTGAATGAGTAAGTT--TTAGGGAACTGGG------ATTAGGAG----------------------------GGGCTTTGGTTAAGTGGATAAATGTGGATGTGGATGATGTGTCCCCAGCGCATTGGTGCACCTG--CT---------------------------------------------------GTTAGGTGTGTGTGC-TGGTGTGCTGGTGAGTTGGTGAGCTGGTGAGCTGTTT---CGCTTCATTAGCG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG
droBip1 scf7180000395544:27956-28154 - AGTGTGGCTACCATGTTCTATGTCTACGCTATATTCCCCGAGCTCAATGAGTAAGTC--TG---------GGTGGTACATTACCGG----------------------------AGGCTTGCTTCAA--------------ATGTGAATGATGTGTCCCCAGCGCATTGGTGCACCTG--TGAGGTGTAACCTGCGCCGAGTGT----------------------------------------GTGT-GTGTGTGTGTGTGTGTTCCGGTG--AG----CTGTTT---CGCTTCATTAGCG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG
droKik1 scf7180000302592:1546416-1546593 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGAGAGGGTTTACAGACAAGCACACACACAGCCACAT-----------------------------------ATA-T----------------------------------------------------------------------AAGCC-GAGTCACGCCAC------------------------------------------------------------------------------TTGC------------------CACCCA-------TAT------------T--ATCACGC-CA---------------------------------------------------------------------------------------AA-AATGTTTACACCCCGACTTGTTGCTCTTCTTA-----TTC--TCTCCGCAGGTCGGAAAAACAACATTTGAAAATACCGCGTGATATCCAAGATGCTAAGA
droFic1 scf7180000454077:679921-680098 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGAGAGGGTTTATT----CGCACTCGCACACA----T--T-------------------------C---------------------------------------------------------------------------------GCGCCAAAGTCACGCCAC------------------------------------------------------------------------------CATT-TA------------------ATA-----GACATAT--------ATA------CA----ATACG-----------------------------------------------------------------------------TATTACA-TATGCTTACAACTCGTTTGGCTCTTGTTCTT------CTCTATTTCCGCAGGTCGGAAAAACAACATTTGAAAATTCCGCGTGATATCCAAGATGCTAAAA
droEle1 scf7180000491001:216034-216217 + T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGAGAGGGT-TATT----CGCGCACACACACACACCC--------------------------------A-TACACGC-----------------------------------------------------------------ACAAATATC-GAGTCACGCCAC------------------------------------------------------------------------------CAATATA------------------ATA---------------------TA--CTTATACA------------------------------------------------------------------------------------TATACAC-CATGTTTACACCTTGTCTCGCTCTTGTTCTT-------CCGATTTCCGCAGGTCGGAGAAACAACATTTGAAAATTCCGCGTGATATCCAAGATGCTAAGA
droRho1 scf7180000779333:745430-745591 - -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGAGAGGGTTTATT----CGCACACACACA-----------------------------------C---------------------------------------------------------------------------------TTATC-GAGTCACGCCAC------------------------------------------------------------------------------CAATATA------------------ATA-------TAT----------ATA--CTTATACA------------------------------------------------------------------------------------TATGTCC-TATGTTTACACCTTGTCTCGCTT---------------CCGATTTCCGCAGGTCGGAGAAACAACATTTGAAAATTCCGCGTGATATCCAAGATGCTAAGA
droBia1 scf7180000301760:3536368-3536550 - TGTCTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGAGAGGGTCTTTT----CGCACACCCACACACACAT--A-------------------------C---------------------------------------------------------------------------------GCACC-GAGTCACGCCAC------------------------------------------------------------------------------CGACATT------------------GTG-------TGCCA----------T--GCTATAT-CTATA-------------------------------------------------------------------------------TACACAC-TGTGCTTACACCGCGC-----TCTTGTTTTTT-----CCCA--CTCCGCAGGTCGGAGAAGCAGCACTTGAAAATTCCGCGGGACATCCAGGATGCCAAGA
droTak1 scf7180000415210:510495-510673 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGAGAGGGTTTATT----CGCACACCCACAAATACACTTA-------------------------C---------------------------------------------------------------------------------GCATC-GAGTCACGCCAC------------------------------------------------------------------------------CAATATA------------------ATA--------------------------TTATATA------------------------------------------------------------------------------------TACAGCC-CATGTTTACACCTCGTCTCGCTCTTGTTCTTCTACTTCCCGATTTCCGCAGGTCGGAGAAACAACACTTAAAAATTCCGCGTGATATCCAAGATGCTAAGA
droEug1 scf7180000409271:589284-589448 - ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGAGAGGGTTTATT----TGCGCACACAC----------A-------------------------C---------------------------------------------------------------------------------GCATC-GAGTCACGCCAC------------------------------------------------------------------------------CAATATA------------------ATA-------TA------------------TCTACA------------------------------------------------------------------------------------TACAGACATATGTTTACACCTCGTCTCGCTCTTGTTCTT------CTCAATTTCCGCAGGTCGGAGAAACAACACTTGAAAATTCCTCGTGATATCCAAGATGCTAAAA
dm3 chrX:17519642-17519831 - -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGAGAGGGTTTACT----CGCACACACACACACA--C--A-------------------------C---------------------------------------------------------------------------------ACATC-GAGTCACGCCAC------------------------------------------------------------------------------CGATATATGAAGTATTTG----T--ATA-----------------TATATA--CATATATA------------------------------------------------------------------------------------CATAGAC-TGTGTTTACACCTCGTCTCGGTTTTGTTCTTG-----CCCAACTTCTGCAGGTCGGAGAAACAACACTTGAAAATTCCGCGTGATATCCAAGATGCTAAGA
droSim2 x:16632635-16632821 - -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGAGAGGGTTTACT----CGAACACACACACACA--C--A-------------------------T---------------------------------------------------------------------------------GCATC-GAGTCACGCCAC------------------------------------------------------------------------------CGATATATGATGTATTTTT--------------------------TATATA--CATATATA------------------------------------------------------------------------------------TATAAAC-TGTGTTTACACCTCGTCTCGGTTTTGTTCTTG-----CCCAACTTCTGCAGATCGGAGAAACAACACTTGAAAATTCCACGTGATATCCAAGATGCTAAGA
droSec2 scaffold_17:1362349-1362537 - -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGAGAGGGTTTACT----CGCACACACACACACACAC--A-------------------------C---------------------------------------------------------------------------------GCATC-GAGTCACGCCAC------------------------------------------------------------------------------CGATATATGATGTATTTTT--------------------------TATATA--CATATATA------------------------------------------------------------------------------------TATAAAC-TGTGTTTACACCTCGTCTCGGTTTTGTTCTTG-----CCCAACTTATGCAGATCGGAGAAACAACACTTGAAAATTCCACGTGATATCCAAGATGCTAAGA
droYak3 X:16146591-16146771 - T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCGAGAGGGTTTACT----CGCACATATACA------C--A-------------------------C---------------------------------------------------------------------------------GCATT-GAGTCACGCCAC------------------------------------------------------------------------------CAATATG------------------GT-TCATACATACAT----------A--TATATAT---ATATGTATATACAAAAA---------------------------------------------------------------------TAC-TGTGTTTACACCTCGTCTGGGTTC------------------TTTTTGCAGGTCGGAGAAACAACACTTGAAAATTCCGCGTGATATCCAAGATGCCAAGA
droEre2 scaffold_4690:7855671-7855849 - -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGAGAGGGTTTACT----CGCACATATACA------C--A-------------------------C---------------------------------------------------------------------------------GCATT-GAGTCACGCCAC------------------------------------------------------------------------------CGATATAT-----------------ATG-------TATAC--------ATACATTTGTATC------------------------------------------------------------------------------------TACAGAC-TGTGTTTACACCTCGTCTCGGTTCTCTTTTTG-----CCCAATATCCGCAGGTCGGAGAAACAACACTTGAAAATTCCGCGTGATATCCAAGATGCTAAGA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
AGTGTGGCGACCATGTGCTATGTCTATGCAATATTTCCCGAATTGAATGAGTGAGTAAATG---------CA----------------------------------------------------------------------TGATGCTGATGTGTCCAAAGCGCATTCGTGCACCTG--CAATGTGTGTC-T---ACATCTGT----------------------------------------GTGC-GTGTGTGTGTGCCTGTTGGTGTG--TGTGA---GTCT---CGGTTGATTTGCGAGAGGGTTTTAT----TCCACACACAAA-----------------------------------CGGCA-TATA-GA-----------------------------------------------------------------ATGATTGCC-AAGTCACGCCAC------------------------------------------------------------------------------CTCT------------------CACACG-------CACAC----------A--CTCTCAC-CAATACCCCCACTCGGATG---------------------------------------------------------------------TGG-CCTGTTTACACCTTTTTTCTCTCTGT---------TTTCTGTTCTCTTCAGGTCTGAGAAGCAACATTTGAAAATACCGCGTGATATACAAGATGCTAAAASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCGGATG---------------------------------------------------------------------TGG-CCTGTTTAC............................................................................................2111.001010000
............................................................................................................................................................................................................................................................................................CT---CGGTTGATTTGCGAGAGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
.............................................................................................................................................................................................................................................................................GTG--TGTGA---GTCT---CGGTTGATC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
......................................................................................................................................................................................................................................................................................................................TTAT----TCCACACACAAA-----------------------------------CGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000
...................................................................................................................................................................................................................................................................................................GTTGATTTGCGAGAGGGTTCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
.......................................................................A----------------------------------------------------------------------TGATGCTGATGTGTCCAAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
dp5
AGTGTGGCGACCATGTGCTATGTCTATGCAATATTTCCCGAATTGAATGAGTGAGTAAATG---------CA----------------------------------------------------------------------TGATGCTGATGTGTCCAAAGCGCATTCGTGCACCTG--CAATGTGTGTC-T---ACATCTGT----------------------------------------GTGC-GTGTGTGTGTGCCTGTTGGTGTG--TGTGA---GTCT---CGGTTGATTTGCGAGAGGGTTTTAT----TCCACACACAAA-----------------------------------CGGCA-TATA-GA-----------------------------------------------------------------ATGATTGCC-AAGTCACGCCAC------------------------------------------------------------------------------CTCT------------------CACACG-------CACAC----------A--CTCACAC-CAATACCCCCACTCGGATG---------------------------------------------------------------------TGG-CCTGTTTACACCTTTTTTCTCTCTGT---------TTTCTGTTCTCTTCAGGTCTGAGAAGAAACATTTGAAAATACCGCGTGATATACAAGATGCTAAAASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.........................................................AATG---------CA----------------------------------------------------------------------TGATGCTGATGTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.........................................................................................................................................................................................................................................................................................................TTGCGAGAGGGTTTTAT----TCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGAAAATACCGCGTGATA...............2011.0010000001000
droWil2
AGTTTGGCCACAATGTGCTATGTCTATGCCATATTCCCGGAATTAAATGCGTAAGTT--TAAGGACTCAAAG------AAAAAAAACAAGAACAAAAACAACAACAAAACATGCAGACGCAGACGCAGTGGC----AAAGGCGGAGGCTGATGTGTTGCCAATTTATTGCT----------------------------------------------------------------------------------------------------------------------CA--------------------------------------------------------------------------------------------------------------------------------------------------------------GCC-AAGTCACGCCACCTTTTTCACTCGCA----------------------------------------CACTAACACACACACACACAC------A------------------C--AC-ACACACACACACACACAC--ACACACACACACA-----------CACAGACA----------CACGAAACACACCGAGAGAATTATTTACAACTAACT-TGTTTGTATGCTTGAGTATATGT----AACTCTCCGCCTTCTCTCTCCCCCTCTCTT--TCTCGCATGTGTTTGCAGGGCCGAGAAACAGCATTTGAAAATACCTCGTGATATACAAGATGCTAAAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAAACAGCATTTGAAAA...........................1912.00200200
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCGAGAAACAGCATTTGAA.............................2111.00100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACCTCGTGATATACAAGATGCT....2411.00100100
....................TGTCTATGCCATATTCCCGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000
.............................CATATTCCCGGAATTAAAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
droVir3
AGCGTGTATGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T---GTGTGTGTGTGTGTGTGTGTGCGGCTCACTGTCAGTTGTTGTTTATTTGTG-------------------------------------CT---AAGCCAATTTGCTTTGAGATTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------CGCCTGCAACAGCAACAATGATAAATCAATAAACTTGCAAAGTCGCGGCTT---------------------TGGCACGTGTCGCGCTGCCTGCAGCGAA-------CGC------------A--AACGCAGC---TGCA-----------------------------------------------------------------------------AAT-TGC-ATTGTTTGCATTTTATTTATCTTC-----TTC-----TTTG--CTTTTAATG-CTAAATAACAACAAC-AATAATAATGCGCG-----------------ASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCACGTGTCGCGCTGCCTGCAGC.....................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000100000000000000000000000000
..............................................................................................................................................................................................................GTGTGTGTGTGCGGCTCAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.501000000000000000000000000000000000000000000000000000000000000001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAACAATGATAA..............................................................................................................................................................................................................................................................................................................1820.501000000000000000000000000000000000000000000000000000000000001000
.............................................................................................................................................................................................................TGTGTGTGTGTGCGGCTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1880.131010000000000000000000000000000000000000000000000000000000000000
droMoj3
AATATATCCCTG-------------------------------TCAACAGCTGACTAACTG---------AA----------------------------------------------------------------------TGTTAATGCTATGTT--ATGTTCACTCGTATAACTGTTCGACTCTTATA-T---ATATTTGC----------------------------------------CCATAATATGTGTAGAAATGTTAACGAC--CTTCA---ATCTTAACAGTCAGTTCGCGAAAAA--------------------TC----------ACTTTTAATTATACGCCATAAATAAATGTCAATGTT-TA-----------------------------------------------------------------TTGACT-TT-ATCTCACTC----------------------------------------------------------------------------TCCACTTCA------------------CACACA-------CACAC----------A--CATACAC-TAGCACTTCCAATCAATAG---------------------------------------------------------------------CG---CTGTTT--------------------------------------------------------------------------------------------GCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
AGTCTGCTAGCCATGTTCTATGTCTATGCAATATTTCCCGAATTGAATGCGTGAGTA--T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGAGTTGA-TCACA----CACACACACACACACACATATA-------------------------C--------ACACTTGATTTATATTATTGAAAATGTTACCAGCTGTGCTTGTGGTGCGCTTTGAGCTTGTTTGTGTGCTT--GACTC-AAGTCACGCCAC------------------------------------------------------------------------------TTTG------------------CATTCA-------CACAC----------A--CACACAC-A-ACAC----AGTCAGATCAACTCTCGTGCATGTATTACA---AATGTATTTAATGTATCTAATTGTGTATGTGTGTGTGTGTGGTTGT----TAC-------------------------------TTTTTACTTTTTACAGCACTGAGAAGCAACATTTGAAAATACCACGTGATATACAAGATGCTAAGASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
AGTGTGGCTACCATGTTCTATGTCTACGCTATATTCCCCGAGCTGAATGAGTAAGTT--TTAGGGAACTGGG------ATTAGGAG----------------------------GGGCTTTGGTTAAGTGGATAAATGTGGATGTGGATGATGTGTCCCCAGCGCATTGGTGCACCTG--CT---------------------------------------------------GTTAGGTGTGTGTGC-TGGTGTGCTGGTGAGTTGGTGAGCTGGTGAGCTGTTT---CGCTTCATTAGCG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..............GTTCTATGTCTACGCTATATTCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
.......................................................................................................................................ATGTGGATGTGGATGATGTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.............................................................AGGGAACTGGG------ATTAGGAG----------------------------GGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
droBip1
AGTGTGGCTACCATGTTCTATGTCTACGCTATATTCCCCGAGCTCAATGAGTAAGTC--TG---------GGTGGTACATTACCGG----------------------------AGGCTTGCTTCAA--------------ATGTGAATGATGTGTCCCCAGCGCATTGGTGCACCTG--TGAGGTGTAACCTGCGCCGAGTGT----------------------------------------GTGT-GTGTGTGTGTGTGTGTTCCGGTG--AG----CTGTTT---CGCTTCATTAGCG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGSizeHit CountTotal NormTotal
No Reads
droKik1
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGAGAGGGTTTACAGACAAGCACACACACAGCCACAT-----------------------------------ATA-T----------------------------------------------------------------------AAGCC-GAGTCACGCCAC------------------------------------------------------------------------------TTGC------------------CACCCA-------TAT------------T--ATCACGC-CA---------------------------------------------------------------------------------------AA-AATGTTTACACCCCGACTTGTTGCTCTTCTTA-----TTC--TCTCCGCAGGTCGGAAAAACAACATTTGAAAATACCGCGTGATATCCAAGATGCTAAGASizeHit CountTotal NormTotal
No Reads
droFic1
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGAGAGGGTTTATT----CGCACTCGCACACA----T--T-------------------------C---------------------------------------------------------------------------------GCGCCAAAGTCACGCCAC------------------------------------------------------------------------------CATT-TA------------------ATA-----GACATAT--------ATA------CA----ATACG-----------------------------------------------------------------------------TATTACA-TATGCTTACAACTCGTTTGGCTCTTGTTCTT------CTCTATTTCCGCAGGTCGGAAAAACAACATTTGAAAATTCCGCGTGATATCCAAGATGCTAAAASizeHit CountTotal NormTotal
No Reads
droEle1
T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGAGAGGGT-TATT----CGCGCACACACACACACCC--------------------------------A-TACACGC-----------------------------------------------------------------ACAAATATC-GAGTCACGCCAC------------------------------------------------------------------------------CAATATA------------------ATA---------------------TA--CTTATACA------------------------------------------------------------------------------------TATACAC-CATGTTTACACCTTGTCTCGCTCTTGTTCTT-------CCGATTTCCGCAGGTCGGAGAAACAACATTTGAAAATTCCGCGTGATATCCAAGATGCTAAGASizeHit CountTotal NormTotal
No Reads
droRho1
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGAGAGGGTTTATT----CGCACACACACA-----------------------------------C---------------------------------------------------------------------------------TTATC-GAGTCACGCCAC------------------------------------------------------------------------------CAATATA------------------ATA-------TAT----------ATA--CTTATACA------------------------------------------------------------------------------------TATGTCC-TATGTTTACACCTTGTCTCGCTT---------------CCGATTTCCGCAGGTCGGAGAAACAACATTTGAAAATTCCGCGTGATATCCAAGATGCTAAGASizeHit CountTotal NormTotal
No Reads
droBia1
TGTCTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGAGAGGGTCTTTT----CGCACACCCACACACACAT--A-------------------------C---------------------------------------------------------------------------------GCACC-GAGTCACGCCAC------------------------------------------------------------------------------CGACATT------------------GTG-------TGCCA----------T--GCTATAT-CTATA-------------------------------------------------------------------------------TACACAC-TGTGCTTACACCGCGC-----TCTTGTTTTTT-----CCCA--CTCCGCAGGTCGGAGAAGCAGCACTTGAAAATTCCGCGGGACATCCAGGATGCCAAGASizeHit CountTotal NormTotal
No Reads
droTak1
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGAGAGGGTTTATT----CGCACACCCACAAATACACTTA-------------------------C---------------------------------------------------------------------------------GCATC-GAGTCACGCCAC------------------------------------------------------------------------------CAATATA------------------ATA--------------------------TTATATA------------------------------------------------------------------------------------TACAGCC-CATGTTTACACCTCGTCTCGCTCTTGTTCTTCTACTTCCCGATTTCCGCAGGTCGGAGAAACAACACTTAAAAATTCCGCGTGATATCCAAGATGCTAAGASizeHit CountTotal NormTotal
No Reads
droEug1
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGAGAGGGTTTATT----TGCGCACACAC----------A-------------------------C---------------------------------------------------------------------------------GCATC-GAGTCACGCCAC------------------------------------------------------------------------------CAATATA------------------ATA-------TA------------------TCTACA------------------------------------------------------------------------------------TACAGACATATGTTTACACCTCGTCTCGCTCTTGTTCTT------CTCAATTTCCGCAGGTCGGAGAAACAACACTTGAAAATTCCTCGTGATATCCAAGATGCTAAAASizeHit CountTotal NormTotal
No Reads
dm3
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGAGAGGGTTTACT----CGCACACACACACACA--C--A-------------------------C---------------------------------------------------------------------------------ACATC-GAGTCACGCCAC------------------------------------------------------------------------------CGATATATGAAGTATTTG----T--ATA-----------------TATATA--CATATATA------------------------------------------------------------------------------------CATAGAC-TGTGTTTACACCTCGTCTCGGTTTTGTTCTTG-----CCCAACTTCTGCAGGTCGGAGAAACAACACTTGAAAATTCCGCGTGATATCCAAGATGCTAAGASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCGTGATATCCAAGATGCTAAGA2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAAATTCCGCGTGATATCCAAGA........2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGGAGAAACAACACTTGAAAAT..........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................CACACACA--C--A-------------------------C---------------------------------------------------------------------------------ACATC-GAGTCACGCCA.............................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACACTTGAAAATTCCGCGTGA.................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAACTTCTGCAGGTCGGA............................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------------------------------------------------------------------------------CGATATATGAAGTATTTG----T--ATA-----------------T................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTACACCTCGTCTCGGTTTTG...........................................................................2211.0010000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACACTTGAAAATTCCGCGTGATATC.............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA------------------------------------------------------------------------------------CATAGAC-TGTGTTTACACCTCGT.....................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAACAACACTTGAAAATTCCGCGTGA.................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCCAAGATGCTAAGA1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTCTTG-----CCCAACTTCTGCAG..................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................ACACACACA--C--A-------------------------C---------------------------------------------------------------------------------ACATC-GAGT....................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGCAGGTCGGAGAAAC.......................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGAGAAACAACACTTGAAAATTCCGCGT...................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTTCTGCAGGTCGGAGAAAC.......................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGAAACAACACTTGAAAATTCCGCG....................2711.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTG-----CCCAACTTCTGCAGGTCGGAGA..........................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-----CCCAACTTCTGCAGGTCGGAG...........................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACACTTGAAAATTCCGCGTGATA...............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCCGCGTGATATCCAAGATGCTAA..2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTTCTTG-----CCCAACTTCTGCAG..................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTGAAAATTCCGCGTGATATCC............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTGAAAATTCCGCGTGATA...............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATATATA------------------------------------------------------------------------------------CATAGAC-TGTGT................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACACCTCGTCTCGGTTT.............................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACTTCTGCAGGTCGGAG...........................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATA------------------------------------------------------------------------------------CATAGAC-TGTGTTT..............................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTACACCTCGTCTCGGTTTTGT..........................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTGAAAATTCCGCGTGATATCCAAGA........2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCCGCGTGATATCCAA..........1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGCGTGATATCCAAGATGC.....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
.....................................................................................................................................................................................................................................................................................................................TTACT----CGCACACACACACACA--.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGAGAGGGTTTACT----CGAACACACACACACA--C--A-------------------------T---------------------------------------------------------------------------------GCATC-GAGTCACGCCAC------------------------------------------------------------------------------CGATATATGATGTATTTTT--------------------------TATATA--CATATATA------------------------------------------------------------------------------------TATAAAC-TGTGTTTACACCTCGTCTCGGTTTTGTTCTTG-----CCCAACTTCTGCAGATCGGAGAAACAACACTTGAAAATTCCACGTGATATCCAAGATGCTAAGASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAAACAACACTTGAAAA...........................1911.00100000000010000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTGAAAATTCCACGTGATATCCA...........2511.00100000010000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGTGATATCCAAGATGCTAAGA2411.00100010000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAGAAACAACACTTGAAAATTCCA......................2611.00100010000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCACGTGATATCCAAGATGCTAAGA2611.00100000010000000000
droSec2
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGAGAGGGTTTACT----CGCACACACACACACACAC--A-------------------------C---------------------------------------------------------------------------------GCATC-GAGTCACGCCAC------------------------------------------------------------------------------CGATATATGATGTATTTTT--------------------------TATATA--CATATATA------------------------------------------------------------------------------------TATAAAC-TGTGTTTACACCTCGTCTCGGTTTTGTTCTTG-----CCCAACTTATGCAGATCGGAGAAACAACACTTGAAAATTCCACGTGATATCCAAGATGCTAAGASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-----CCCAACTTATGCAGATCGG.............................................2111.0011000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTTTACACCTCGTCTCGG................................................................................2111.0011000
droYak3
T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCGAGAGGGTTTACT----CGCACATATACA------C--A-------------------------C---------------------------------------------------------------------------------GCATT-GAGTCACGCCAC------------------------------------------------------------------------------CAATATG------------------GT-TCATACATACAT----------A--TATATAT---ATATGTATATACAAAAA---------------------------------------------------------------------TAC-TGTGTTTACACCTCGTCTGGGTTC------------------TTTTTGCAGGTCGGAGAAACAACACTTGAAAATTCCGCGTGATATCCAAGATGCCAAGASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATTCCGCGTGATATCCAAGATGC.....2511.00100100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGAAAATTCCGCGTGATATCCAA..........2511.00101000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAAATTCCGCGTGATATCCAAGATGC.....2811.00100000010000
droEre2
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGAGAGGGTTTACT----CGCACATATACA------C--A-------------------------C---------------------------------------------------------------------------------GCATT-GAGTCACGCCAC------------------------------------------------------------------------------CGATATAT-----------------ATG-------TATAC--------ATACATTTGTATC------------------------------------------------------------------------------------TACAGAC-TGTGTTTACACCTCGTCTCGGTTCTCTTTTTG-----CCCAATATCCGCAGGTCGGAGAAACAACACTTGAAAATTCCGCGTGATATCCAAGATGCTAAGASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGGAGAAACAACACTTGAA.............................2111.0011000000

Generated: 06/08/2015 at 03:22 PM