ID:

dpe_874

 Coordinate:

scaffold_1696:2548-2698 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-12.2 -12.1 -12.1

Flybase annnotation

exon [dper_GLEANR_16438:1]; CDS [Dper\GL15366-cds]; intron [Dper\GL15366-in]

No Repeatable elements found

mature
  1. scaffold_662:6257-6284 +
  2. scaffold_1037:5408-5435 -
  3. scaffold_1745:1085-1112 -
  4. scaffold_726:2829-2856 -
  5. scaffold_327:50219-50246 +
  6. scaffold_2812:1097-1124 +
  7. dpe_1496  scaffold_3390:1660-1687 -
  8. dpe_1967  scaffold_643:2696-2723 -
  9. scaffold_1076:1694-1721 -
  10. scaffold_4040:1998-2025 +
  11. dpe_874  scaffold_1696:2579-2606 -
  12. scaffold_4749:1290-1317 -
  13. scaffold_2247:101-128 -
  14. scaffold_8741:385-412 -
  15. scaffold_7136:288-315 +
star
  1. scaffold_662:6207-6229 +
  2. scaffold_1037:5463-5485 -
  3. scaffold_2189:499-521 +
  4. scaffold_1745:1140-1162 -
  5. scaffold_726:2884-2906 -
  6. scaffold_327:50169-50191 +
  7. scaffold_2812:1047-1069 +
  8. scaffold_3387:2374-2396 +
  9. dpe_1496  scaffold_3390:1715-1737 -
  10. dpe_1967  scaffold_643:2751-2773 -
  11. scaffold_1076:1749-1771 -
  12. scaffold_4040:1948-1970 +
  13. dpe_874  scaffold_1696:2634-2656 -
  14. scaffold_5845:426-448 -
  15. scaffold_8741:440-462 -

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CAACTCCACTGAGGCAAACAGGCTATCAACGTCACCTCCCAAGAAGAAAGGTAATGACACTGGGGTGTCACACGTCGTCCCTGTGCCAAACGAAATGCTCAGCCTTGTCCACTCCGCACAATGAGTAGGCATAGCAAAGATCTCAATGACAGCGAAAGTAACCATATCGAACAGCCTGAGCTCCTTCCATGGCAGGTAGTGCCATCGAGCAAGAGAGTGCCTTCTATTCACATAGCTGGTGTCAAAGCTAT
********************************************************************************************...((((..((((.....((((........))))))))..))))..................................********************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 V111
male body		 V042
embryo
 V057
head
.......................................CAAGAAGAAAGGTAATGACACTGG............................................................................................................................................................................................ 24 0 18 0.94 17 15 2 0 0
..............................................................................................................................................TCAATGACAGCGAAAGTAACCATATCGA................................................................................. 28 0 15 0.93 14 14 0 0 0
................................................................................................................................................................................................................................TATTCACATAGCTGGTGTCAAAGC... 24 0 14 0.93 13 13 0 0 0
................................................................................................................................................................................................................................TATTCACATAGCTGGTGTCAAAGCTA. 26 0 12 0.58 7 7 0 0 0
................................................................................................................................................................................................................................TATTCACATAGCTGGTGTCAAAG.... 23 0 14 0.57 8 8 0 0 0
.......................................CAAGAAGAAAGGTAATGACACTGGGG.......................................................................................................................................................................................... 26 0 18 0.44 8 8 0 0 0
.......................................CAAGAAGAAAGGTAATGACACTGGG........................................................................................................................................................................................... 25 0 18 0.33 6 6 0 0 0
.................................................................................................................................................................................................................................ATTCACATAGCTGGTGTCAAAGCTA. 25 0 12 0.25 3 3 0 0 0
.......................................CAAGAAGAAAGGTAATGACACT.............................................................................................................................................................................................. 22 0 19 0.16 3 1 2 0 0
..........................................................................................................................................................................ACAGCCTGAGCTCCTTCCATGGCAGG....................................................... 26 0 20 0.15 3 3 0 0 0
................................................................................................................................................................................................................................TATTCACAGAGCTGGTGTCAAAGC... 24 1 14 0.14 2 2 0 0 0
.................................................................................................................................................................................................................................ATTCACATAGCTGGTGTCAAAGC... 23 0 14 0.14 2 2 0 0 0
..............................................................................................................................................TCAATGACAGCGAAAGTAACCATAT.................................................................................... 25 0 15 0.13 2 2 0 0 0
............................................................................................AAATGCTCAGCCTTGTCCACTCC........................................................................................................................................ 23 0 15 0.13 2 2 0 0 0
........................................AAGAAGAAAGGTAATGACACTGG............................................................................................................................................................................................ 23 0 18 0.11 2 2 0 0 0
.......................................CAAGAAGAAAGGTAATGACACTG............................................................................................................................................................................................. 23 0 18 0.11 2 2 0 0 0
..........................................................................................................................................................................ACAGCCTGAGCTCCTTCCATGGCA......................................................... 24 0 20 0.10 2 2 0 0 0
................................................................................................................................................................................TGAGCTCCTTCCATGGCAGGTAGTGC................................................. 26 0 20 0.10 2 2 0 0 0
...........................................................................................................................................................................CAGCCTGAGCTCCTTCCATGGCAGG....................................................... 25 0 20 0.10 2 2 0 0 0
...............................................................................................................................................................................................................................CTATTCACATAGCTGGTGTCAAAGCT.. 26 0 12 0.08 1 1 0 0 0
..............................................................................................................................................................................................................................TCTATTCACATAGCTGGTGTCAAAGCTA. 28 0 12 0.08 1 1 0 0 0
................................................................................................................................................................................................................................TATTCACATAGCTGGTGTCAAAGCT.. 25 0 12 0.08 1 1 0 0 0
.....................................................................ACACGTCGGCCCTGTGCCAAACGAA............................................................................................................................................................. 25 1 13 0.08 1 1 0 0 0
.......................................................................................................................................................................................................TGCCATCGAGCAAGAGAGTGC............................... 21 0 13 0.08 1 1 0 0 0
................................................................................................................................................................................................................................TATTCGCATAGCTGGTGTCAAAG.... 23 1 14 0.07 1 1 0 0 0
..............................................................................................................................................................................................................................TCTATTCACATAGCTGGTGTCAAAGC... 26 0 14 0.07 1 1 0 0 0
............................................................................................................................................................................................................................CTTCTATTCACATAGCTGGTGTCA....... 24 0 14 0.07 1 1 0 0 0
..............................................................................................................................................................................................................................TCTATTCACATAGCTGGTGT......... 20 0 14 0.07 1 1 0 0 0
..............................................................................................................................................................................................................................TCTATTCACATAGCTGGTGTCAAAG.... 25 0 14 0.07 1 1 0 0 0
................................................................................................................................................................................................................................TATTCACATAGCTGGTGTCAAAGG... 24 1 14 0.07 1 1 0 0 0
................................................................................................................................................................................................................................TATTCACAAAGCTGGTGTCAAAGC... 24 1 14 0.07 1 1 0 0 0
............................................................................................................................................................................................................................CTTCTATTCACATAGCTGGTGTCAA...... 25 0 14 0.07 1 1 0 0 0
..............................................................................................................................................TCAATGACAGCGAAAGTAAGCATAT.................................................................................... 25 1 15 0.07 1 1 0 0 0
.....................................................................................................................ACAATGAGTAGGCATAGCAAAGATC............................................................................................................. 25 0 15 0.07 1 1 0 0 0
...........................................................................................................................................CTGTCAATGACAGCGAAAGTAACCATAT.................................................................................... 28 2 15 0.07 1 1 0 0 0
...................................................................................................................................................GACAGCGAAAGTAGCCATATCGA................................................................................. 23 1 15 0.07 1 0 0 1 0
.........................................................CACTGGGGTGTCACACGTCGTCCCTG........................................................................................................................................................................ 26 0 15 0.07 1 1 0 0 0
..............................................................................................................................................TCAATGACAGCGAAAGTAACCATA..................................................................................... 24 0 15 0.07 1 1 0 0 0
.........................................................CACTGGGGTGTCACACGTCGTCC........................................................................................................................................................................... 23 0 15 0.07 1 1 0 0 0
.........................................................................................................................TGAGTAGGCATAGCAAAGATC............................................................................................................. 21 0 15 0.07 1 1 0 0 0
..............................................................................................................................................TCAATGACGGCGAAAGTAACCATATCGAG................................................................................ 29 2 15 0.07 1 1 0 0 0
..............................................................................................................................................TCAATGACAGCGAAAGTAAC......................................................................................... 20 0 15 0.07 1 0 1 0 0
..............................................................................................................................................TCAATGACAGCGAAAGTAACCAT...................................................................................... 23 0 15 0.07 1 1 0 0 0
...............................................................................................................................................CAATGACAGCGAAAGTAACCATATCG.................................................................................. 26 0 15 0.07 1 1 0 0 0
..............................................................................................................................................TCAATGACAGCGAAAGTAACCATATC................................................................................... 26 0 15 0.07 1 1 0 0 0
......................................................................................................................CAATGAGTAGGCATAGCAAAGATC............................................................................................................. 24 0 15 0.07 1 1 0 0 0
............................................................................................................................................ACTCAATGACAGCGAAAGTAACCATAT.................................................................................... 27 1 15 0.07 1 1 0 0 0
..............................................................................................................................................TCAATGACGGCGAAAGTAACCATATCG.................................................................................. 27 1 15 0.07 1 1 0 0 0
...........................................................................................................................................................AAGTAACCATATCGATCAGCCTGAGC...................................................................... 26 1 16 0.06 1 1 0 0 0
.......................................CAAGAAGAAAGGTAATGACACTGGGGT......................................................................................................................................................................................... 27 0 18 0.06 1 1 0 0 0
..........................................CAAGAAAGGTAATGACACTGG............................................................................................................................................................................................ 21 1 18 0.06 1 1 0 0 0
.........................................................CACTGGGGTGTCACACGTCGT............................................................................................................................................................................. 21 0 18 0.06 1 1 0 0 0
................................................................................................................................................................................TGAGCTCCTTCCATGGCAGGTAGTGCCA............................................... 28 0 18 0.06 1 0 1 0 0
.......................................CAAGAAGAAAGGTAATGACACCCGG........................................................................................................................................................................................... 25 2 19 0.05 1 1 0 0 0
..........................................................................................................................................................................ACAGCCTGTGCTCCTTCCATGGCAGG....................................................... 26 1 20 0.05 1 1 0 0 0
..........................................................................................................................................................................ACAGCCTGAGCTCCTTCCATG............................................................ 21 0 20 0.05 1 1 0 0 0
............GACAAGCAGGCTATCAACGA........................................................................................................................................................................................................................... 20 3 20 0.05 1 1 0 0 0
..........................................................................................................................................................................ACAGCCTGGGCTCCTTCCATGG........................................................... 22 1 20 0.05 1 1 0 0 0
...........................................................................................................................................................................................................ACCGAGGAAGAGAGTGCCTA............................ 20 3 20 0.05 1 0 0 0 1
............................................................TGGGGTGGCTCACGCCGTC............................................................................................................................................................................ 19 3 20 0.05 1 1 0 0 0

Anti-sense strand reads

GTTGAGGTGACTCCGTTTGTCCGATAGTTGCAGTGGAGGGTTCTTCTTTCCATTACTGTGACCCCACAGTGTGCAGCAGGGACACGGTTTGCTTTACGAGTCGGAACAGGTGAGGCGTGTTACTCATCCGTATCGTTTCTAGAGTTACTGTCGCTTTCATTGGTATAGCTTGTCGGACTCGAGGAAGGTACCGTCCATCACGGTAGCTCGTTCTCTCACGGAAGATAAGTGTATCGACCACAGTTTCGATA
*********************************************************************************...((((..((((.....((((........))))))))..))))..................................******************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 M021
embryo
 V042
embryo
 V111
male body
...............................................................................................................................CCGTATCGTTTCTAGAGTTACTGTC................................................................................................... 25 0 14 9.21 129 99 30 0 0
............................................................................................................................CATCCGTATCGTTTCTAGAGTTACTGTC................................................................................................... 28 0 13 4.85 63 63 0 0 0
..............................................................................................................................TCCGTATCGTTTCTAGAGTTACTGTC................................................................................................... 26 0 14 4.50 63 19 44 0 0
................................................................................................................................CGTATCGTTTCTAGAGTTACTGTC................................................................................................... 24 0 14 2.43 34 29 5 0 0
.............................................................................................................................ATCCGTATCGTTTCTAGAGTTACTGTC................................................................................................... 27 0 14 1.50 21 20 1 0 0
............................................................................................................................CATCCGTATCGTTTCTAGAGTTACTGT.................................................................................................... 27 0 14 0.57 8 8 0 0 0
...............................................................................................................................CCGTATCGTTTCTAGAGTTACTGT.................................................................................................... 24 0 15 0.47 7 7 0 0 0
.............................................................................................................................................................................CGGACTCGAGGAAGGTACCGTCCAT..................................................... 25 0 20 0.35 7 7 0 0 0
................................................................................................................................CGTATCGTTTCTAGAGTTACTGT.................................................................................................... 23 0 15 0.27 4 4 0 0 0
................................................................................................................................................................................................................CGTTCTCTCACGGAAGATAAGTGTAT................. 26 0 12 0.25 3 3 0 0 0
...........................................................................................................................................................................................................TAGCTCGTTCTCTCACGGAAGATAAGT..................... 27 0 12 0.25 3 3 0 0 0
.....................................................................TGTGCAGCAGGGACACGGTTTGCT.............................................................................................................................................................. 24 0 13 0.23 3 3 0 0 0
..............................................................................................................................CCCGTATCGTTTCTAGAGTTACTGTC................................................................................................... 26 1 14 0.21 3 0 3 0 0
............................................................................................................................................................................................................AGCTCGTTCTCTCACGGAAGATAAGT..................... 26 0 12 0.17 2 2 0 0 0
......................................................................GTGCAGCAGGGACACGGTTTGCT.............................................................................................................................................................. 23 0 13 0.15 2 2 0 0 0
............................................................................................................................CATCCGTATCGTTTCTAGATTTACTGTC................................................................................................... 28 1 13 0.15 2 2 0 0 0
.................................................................................................................................GTATCGTTTCTAGAGTTACTGTC................................................................................................... 23 0 14 0.14 2 2 0 0 0
...................................................................................................................................ATCGTTTCTAGAGTTACTGTC................................................................................................... 21 0 14 0.14 2 2 0 0 0
......................................................................GTGCAGCAGGGACAAGGTTTGCT.............................................................................................................................................................. 23 1 15 0.13 2 2 0 0 0
...............................................................................................................................CCGTATCGTTTCTAGAGTTACTG..................................................................................................... 23 0 15 0.13 2 2 0 0 0
..........................................................................................................................................................................TGTCGGACTCGAGGAAGGTACCGTC........................................................ 25 0 20 0.10 2 2 0 0 0
...........................................................................................................................................................................GTCGGACTCGAGGAAGGTACCG.......................................................... 22 0 20 0.10 2 2 0 0 0
................................................................................................................................................................................................................CGTTCTCTCACGGAAGATAAGTG.................... 23 0 12 0.08 1 1 0 0 0
.................................................................................................................................................................................................................GTTCTCTCACGGAAGATA........................ 18 0 12 0.08 1 1 0 0 0
................................................................................................................................................................................................................CGTTCTCTCACGGAAGATAAGTGT................... 24 0 12 0.08 1 1 0 0 0
...................................................................................................................................................................................................................TCTCTCACGGAAGATAAGTGTATC................ 24 0 12 0.08 1 1 0 0 0
........................................................................GCAGCAGGGACACGGTTTGCT.............................................................................................................................................................. 21 0 13 0.08 1 1 0 0 0
............................................................................................................................CATCCGTATCGCTTCTAGAGTTACTGTC................................................................................................... 28 1 13 0.08 1 1 0 0 0
....................CGGATAGTTGCAGTAGAG..................................................................................................................................................................................................................... 18 2 13 0.08 1 0 0 0 1
........................................................................GCAGCAGGGACACGGTTTGCTTT............................................................................................................................................................ 23 0 13 0.08 1 1 0 0 0
......................................................................................................................................................................................................CACGGTAGCTCGTTCTCTCACGGAAGAT......................... 28 0 13 0.08 1 1 0 0 0
............................................................................................................................CATCCGCATCGTTTCTAGAGTTACTGTC................................................................................................... 28 1 13 0.08 1 1 0 0 0
.........................................................................CAGCAGGGACACGGTTTTCT.............................................................................................................................................................. 20 1 13 0.08 1 1 0 0 0
....................................................................GTGTGCAGCAGGGACACGGTTTGC............................................................................................................................................................... 24 0 13 0.08 1 1 0 0 0
..............................................................................................................................TCCGTATCGTTTCTAGAGTTACTGTCG.................................................................................................. 27 0 14 0.07 1 0 1 0 0
.............................................................................................................................................................................................................................AAGATAAGTGTATCGACC............ 18 0 14 0.07 1 1 0 0 0
...........................................................................................................................TCATCCGTATCGTTTCTAGAGTTACTGT.................................................................................................... 28 0 14 0.07 1 1 0 0 0
...............................................................................................................................CCGTATCGTTTCTAGAGTTACTGTCG.................................................................................................. 26 0 14 0.07 1 1 0 0 0
................................................................................................................................GGTATCGTTTCTAGAGTTACTGTC................................................................................................... 24 1 14 0.07 1 1 0 0 0
..........................................................................................................................................................................................................................CGGAAGATAAGTGTATCGAC............. 20 0 14 0.07 1 1 0 0 0
...............................................................................................................................CCGTATCTTTTCTAGAGTTACTGTC................................................................................................... 25 1 14 0.07 1 1 0 0 0
................................................................................................................................CGTATCGTTTCTAGAGTTACTGTCGC................................................................................................. 26 0 14 0.07 1 1 0 0 0
...............................................................................................................................CCGTATCGTTTCTAGACTTACTGTC................................................................................................... 25 1 14 0.07 1 1 0 0 0
...............................................................................................................................CCGTATCGTTTCTAGAGTTACTGTCGC................................................................................................. 27 0 14 0.07 1 1 0 0 0
..............................................................................................................................................................................................................................AGATAAGTGTATCGACCACAGT....... 22 0 14 0.07 1 1 0 0 0
...............................................................................................................................CCGTATCGTTTCTAGAATTACTGTC................................................................................................... 25 1 14 0.07 1 1 0 0 0
................................................................................................................................CGTATCGTTTCTAGACATACTGTC................................................................................................... 24 2 14 0.07 1 1 0 0 0
................................................................................................................................CGTATCGTTTCTACTTTTACTGTC................................................................................................... 24 3 14 0.07 1 1 0 0 0
............................................................................................................................GATCCGTATCGTTTCTAGAGTTACTGTC................................................................................................... 28 1 14 0.07 1 1 0 0 0
.............................................................................................................................ATCCGGATCGTTTCTAGAGTTACTGTC................................................................................................... 27 1 14 0.07 1 1 0 0 0
............................................................................................................................CATCCGTATCGTTTCTAGAGTTACT...................................................................................................... 25 0 14 0.07 1 1 0 0 0
............................................................................................................................CATCCGTATCGTTTCTAGGGTTACTGT.................................................................................................... 27 1 14 0.07 1 1 0 0 0
..............................................................................................................................TCCGTATCGTTTCTAGAGTTACT...................................................................................................... 23 0 15 0.07 1 0 1 0 0
............................................................................................TTTACGAGTCGGAACAGGTGAGG........................................................................................................................................ 23 0 15 0.07 1 1 0 0 0
......................................................................GCGCAGCAGGGACAAGGTTTGCT.............................................................................................................................................................. 23 2 15 0.07 1 1 0 0 0
..........................................................................................................................CTCATCCGTATCGTTTCTAGA............................................................................................................ 21 0 15 0.07 1 1 0 0 0
...............................................................................................ACGAGTCGGAACAGGTGAGG........................................................................................................................................ 20 0 15 0.07 1 1 0 0 0
....................................................................TTGTGCAGCAGGGACAAGGTTTGCT.............................................................................................................................................................. 25 2 15 0.07 1 1 0 0 0
.............................................................................................................................ATCCGTATCGTTTCTAGAGTTACTG..................................................................................................... 25 0 15 0.07 1 1 0 0 0
......................................................................................................................GTTACTCATCCGTATCGTTTCTAGAGTT......................................................................................................... 28 0 15 0.07 1 1 0 0 0
..AGAGGTGACTCGGTTTCTCCG.................................................................................................................................................................................................................................... 21 3 16 0.06 1 1 0 0 0
......................................GGTTCTTCTTTCCATTACTGTGAC............................................................................................................................................................................................. 24 0 18 0.06 1 1 0 0 0
...................................................................................................................................................................................CGAGGGAGGTACCGTCCATCACGGT............................................... 25 1 18 0.06 1 1 0 0 0
...GAAGTGACTCGGTTTCTCCG.................................................................................................................................................................................................................................... 20 3 19 0.05 1 1 0 0 0
...........................................................................................................................................................................GTCGGACTCGAGGAAGGTACCGTCC....................................................... 25 0 20 0.05 1 1 0 0 0
..............................................................................................................................................................................................................................AGGTAATTGTTTCGACCAC.......... 19 3 20 0.05 1 0 0 1 0
..............................................................................................................................................................................GGACTCGAGGAAGGTACCGTCCAT..................................................... 24 0 20 0.05 1 1 0 0 0
.........................................................................................................................................................................TTGTCGGACTCGAGGAAGGTACCGT......................................................... 25 0 20 0.05 1 1 0 0 0
.........................................................................................................................................................................TTGTCGGACTCGAGGAAGGTACCG.......................................................... 24 0 20 0.05 1 1 0 0 0
.............................................................................................................................................................................CGGACTCGAGGAAGGTACCGTCC....................................................... 23 0 20 0.05 1 1 0 0 0
...............................................................................................................................................................................GACTCGAGGAAGGTACCGTCCAT..................................................... 23 0 20 0.05 1 1 0 0 0
........................................................................................................................................................................CTTGTCGGACTCGAGGAAGGTAC............................................................ 23 0 20 0.05 1 0 0 1 0
........................................................................................................................................................................CTTGTCGGACTCGAGGAAGGTACC........................................................... 24 0 20 0.05 1 1 0 0 0
................................................................................................................................................................TGGTATAGCTTGTCGGACT........................................................................ 19 0 20 0.05 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_1696:2498-2748 - dpe_874 CAACTCCACTGAGGCAAACAGGCTATCAACGTCACCTCCCAAGAAGAAAGGTAATGACACTGGGGTGTCACACGTCGTCCCTGTGCCAAACGAA-ATGCTCAGCCTTGTCCACTCCGCACAATGAGTAGGCATAGCAAAGATCTCAATGACAGCGAAAGTAACCATATCGAACAGCCTGAGCTCCTTCCATGGCAGGTAGTGCCATCGAGCAAGAGAGTGCCTTCTATTCACATAGCTGGTGTCAAAGCTAT
dp5 Unknown_group_726:29637-29888 + GAACTCCACAGACGCAAACAGGGTATCAACGTCACCTCCCAAGAAGAAAGGTAATGACACTGGGGTGTCACACGTCGTCCCTGTGCCAAACGAAAATGCTCAGCCTTGTCCACTCCCCACATTGAGTAGGCATAGCAAAGATCTCAATGACAGCGAAAGTAGCCATATCGAACAGCCTGAGCTCCTTCCATGGCAGGTAGTGCCATCGAGCAAGAGAGTGCCTTCTATTCACATAGCTGGTGTCAAAGCTAT
droVir3 scaffold_13052:1887902-1887917 - C--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATGTAAAAGAAAT
droTak1 scf7180000413700:1737-1810 - ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACCTCCATCCTTGGAGGACAGTGCCCTCCAGCAGGAAGGTACCACCACTGCAAGTAGCTAGCACTACAGAGAT
dm3 chrUextra:4127521-4127594 - ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGCTGCCTCCATGGAAAATCGTGCCCCAGAGCCGTAGAGCACCTCCTATACTCGTCAATGATGTAAAGGAAAT
droSim2 node_17869:366-441 + C--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGCTGCCACCTTGGAAACTGGTGCCACTAAGCTGCAGAGCGCCACCCATACTCGTTGACGACGTCAAAGAAAT
droSec2 scaffold_210:3530-3605 + C--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGCTGCCACCTTGGAAACTTGTGCCACTAAGCTGCAGAGCGCCACCCATTCTCGTTGACGATGTCAAAGAAAT
droYak3 v2_chrUn_875:25243-25319 + C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGAACTGCCCCCGTGGCAAATAGTGCCACAGAGCCGCAGGGCCCCCCCTATTCATATAGAAAATGTTAGGGAAAT
droEre2 scaffold_4827:44543-44644 + CAGC------------------------------------------------------------------------------------------------------------------------------------------------------TAAAATGAACGTAAACCAAATCCCAATTTACTGCCTTGGCAGACAGTCCCAGTAAGCAGGAAACCTCCATCAATCTCTTTGACCAATATCTAGCAGAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
CAACTCCACTGAGGCAAACAGGCTATCAACGTCACCTCCCAAGAAGAAAGGTAATGACACTGGGGTGTCACACGTCGTCCCTGTGCCAAACGAA-ATGCTCAGCCTTGTCCACTCCGCACAATGAGTAGGCATAGCAAAGATCTCAATGACAGCGAAAGTAACCATATCGAACAGCCTGAGCTCCTTCCATGGCAGGTAGTGCCATCGAGCAAGAGAGTGCCTTCTATTCACATAGCTGGTGTCAAAGCTATSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.......................................CAAGAAGAAAGGTAATGACACTGG.............................................................................................................................................................................................24180.94170150002
...............................................................................................................................................TCAATGACAGCGAAAGTAACCATATCGA.................................................................................28150.93140140000
.................................................................................................................................................................................................................................TATTCACATAGCTGGTGTCAAAGC...24140.93130130000
.................................................................................................................................................................................................................................TATTCACATAGCTGGTGTCAAAGCTA.26120.587070000
.................................................................................................................................................................................................................................TATTCACATAGCTGGTGTCAAAG....23140.578080000
.......................................CAAGAAGAAAGGTAATGACACTGGGG...........................................................................................................................................................................................26180.448080000
.......................................CAAGAAGAAAGGTAATGACACTGGG............................................................................................................................................................................................25180.336060000
..................................................................................................................................................................................................................................ATTCACATAGCTGGTGTCAAAGCTA.25120.253030000
.......................................CAAGAAGAAAGGTAATGACACT...............................................................................................................................................................................................22190.163010002
...........................................................................................................................................................................ACAGCCTGAGCTCCTTCCATGGCAGG.......................................................26200.153030000
..................................................................................................................................................................................................................................ATTCACATAGCTGGTGTCAAAGC...23140.142020000
...............................................................................................................................................TCAATGACAGCGAAAGTAACCATAT....................................................................................25150.132020000
............................................................................................AA-ATGCTCAGCCTTGTCCACTCC........................................................................................................................................23150.132020000
........................................AAGAAGAAAGGTAATGACACTGG.............................................................................................................................................................................................23180.112020000
.......................................CAAGAAGAAAGGTAATGACACTG..............................................................................................................................................................................................23180.112020000
...........................................................................................................................................................................ACAGCCTGAGCTCCTTCCATGGCA.........................................................24200.102020000
.................................................................................................................................................................................TGAGCTCCTTCCATGGCAGGTAGTGC.................................................26200.102020000
............................................................................................................................................................................CAGCCTGAGCTCCTTCCATGGCAGG.......................................................25200.102020000
................................................................................................................................................................................................................................CTATTCACATAGCTGGTGTCAAAGCT..26120.081010000
...............................................................................................................................................................................................................................TCTATTCACATAGCTGGTGTCAAAGCTA.28120.081010000
.................................................................................................................................................................................................................................TATTCACATAGCTGGTGTCAAAGCT..25120.081010000
........................................................................................................................................................................................................TGCCATCGAGCAAGAGAGTGC...............................21130.081010000
...............................................................................................................................................................................................................................TCTATTCACATAGCTGGTGTCAAAGC...26140.071010000
.............................................................................................................................................................................................................................CTTCTATTCACATAGCTGGTGTCA.......24140.071010000
...............................................................................................................................................................................................................................TCTATTCACATAGCTGGTGT.........20140.071010000
...............................................................................................................................................................................................................................TCTATTCACATAGCTGGTGTCAAAG....25140.071010000
.................................................................................................................................................................................................................................TATTCACATAGCTGGTGTCAAAGG...24140.071010000
.............................................................................................................................................................................................................................CTTCTATTCACATAGCTGGTGTCAA......25140.071010000
......................................................................................................................ACAATGAGTAGGCATAGCAAAGATC.............................................................................................................25150.071010000
.........................................................CACTGGGGTGTCACACGTCGTCCCTG.........................................................................................................................................................................26150.071010000
...............................................................................................................................................TCAATGACAGCGAAAGTAACCATA.....................................................................................24150.071010000
.........................................................CACTGGGGTGTCACACGTCGTCC............................................................................................................................................................................23150.071010000
..........................................................................................................................TGAGTAGGCATAGCAAAGATC.............................................................................................................21150.071010000
...............................................................................................................................................TCAATGACAGCGAAAGTAAC.........................................................................................20150.071000001
...............................................................................................................................................TCAATGACAGCGAAAGTAACCAT......................................................................................23150.071010000
................................................................................................................................................CAATGACAGCGAAAGTAACCATATCG..................................................................................26150.071010000
...............................................................................................................................................TCAATGACAGCGAAAGTAACCATATC...................................................................................26150.071010000
.......................................................................................................................CAATGAGTAGGCATAGCAAAGATC.............................................................................................................24150.071010000
.......................................CAAGAAGAAAGGTAATGACACTGGGGT..........................................................................................................................................................................................27180.061010000
.........................................................CACTGGGGTGTCACACGTCGT..............................................................................................................................................................................21180.061010000
.................................................................................................................................................................................TGAGCTCCTTCCATGGCAGGTAGTGCCA...............................................28180.061000001
...........................................................................................................................................................................ACAGCCTGAGCTCCTTCCATG............................................................21200.051010000
dp5
GAACTCCACAGACGCAAACAGGGTATCAACGTCACCTCCCAAGAAGAAAGGTAATGACACTGGGGTGTCACACGTCGTCCCTGTGCCAAACGAAAATGCTCAGCCTTGTCCACTCCCCACATTGAGTAGGCATAGCAAAGATCTCAATGACAGCGAAAGTAGCCATATCGAACAGCCTGAGCTCCTTCCATGGCAGGTAGTGCCATCGAGCAAGAGAGTGCCTTCTATTCACATAGCTGGTGTCAAAGCTATSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......................................CAAGAAGAAAGGTAATGACACTGGGG...........................................................................................................................................................................................26380.672420206802002510
.......................................CAAGAAGAAAGGTAATGACACTGG.............................................................................................................................................................................................24334.00102074202002220
.......................................CAAGAAGAAAGGTAATGACACTGGG............................................................................................................................................................................................25333.0099066200003100
....................................................................................................................................................GACAGCGAAAGTAGCCATATCGA.................................................................................23632.501950181301001000
....................................................................................................................................................GACAGCGAAAGTAGCCATATCGAAC...............................................................................25624.67148012690623200
.................................................................................................................................................................................................................................TATTCACATAGCTGGTGTCAAAGC...24623.33140013730000000
...................................................................................................................................................TGACAGCGAAAGTAGCCATATCGA.................................................................................24619.17115097102011400
....................................................................................................................................................GACAGCGAAAGTAGCCATATCGAACAGC............................................................................28613.338007360001000
.................................................................................................................................................................................................................................TATTCACATAGCTGGTGTCAAAGCTA.26611.5069058110000000
....................................................................................................................................................GACAGCGAAAGTAGCCATATCG..................................................................................22611.176706510001000
.................................................................................................................................................................................................................................TATTCACATAGCTGGTGTCAAAG....23610.336206000200000
.................................................................................................................................................................................................................................TATTCACATAGCTGGTGTCAAAGCT..25610.176106100000000
....................................................................................................................................................GACAGCGAAAGTAGCCATATCGAACAG.............................................................................27610.006005810000100
....................................................................................................................................................GACAGCGAAAGTAGCCATATCGAA................................................................................2467.004204200000000
........................................AAGAAGAAAGGTAATGACACTGGGG...........................................................................................................................................................................................2536.331901800000100
...................................................................................................................................................TGACAGCGAAAGTAGCCATATCGAAC...............................................................................2665.503302410002600
...................................................................................................................................................TGACAGCGAAAGTAGCCATATCG..................................................................................2365.503303000100200
....................................................................................................................................................GACAGCGAAAGTAGCCATATCGAACA..............................................................................2665.503303010100100
.......................................CAAGAAGAAAGGTAATGACACTG..............................................................................................................................................................................................2335.001501310000100
.................................................................................................................................................................................TGAGCTCCTTCCATGGCAGGTAGTG..................................................2564.672802700001000
.................................................................TGTCACACGTCGTCCCTGTGCCAAACG................................................................................................................................................................2764.1725013000001200
.................................................................................................................................................................................TGAGCTCCTTCCATGGCAGGTAGTGCCAT..............................................2963.672202200000000
.................................................................................................................................................................................TGAGCTCCTTCCATGGCAGGTAG....................................................2363.672201900100110
..................................................................................................................................................................................................................................ATTCACATAGCTGGTGTCAAAGC...2363.672202110000000
.......................................CAAGAAGAAAGGTAATGACACTGGGGT..........................................................................................................................................................................................2733.331001000000000
......................................CCAAGAAGAAAGGTAATGACACTGGGG...........................................................................................................................................................................................2733.331001000000000
...................................................................................................................................................TGACAGCGAAAGTAGCCATATCGAA................................................................................2563.171901410000400
.................................................................................................................................................................................TGAGCTCCTTCCATGGCAGGTAGTGC.................................................2663.171901800001000
....TCCACAGACGCAAACAGGGTATCAACG.............................................................................................................................................................................................................................2733.0090810000000
.....................................................................................................................................................ACAGCGAAAGTAGCCATATCGA.................................................................................2262.831701600001000
...................................................................................................................................................TGACAGCGAAAGTAGCCATATCGAACAG.............................................................................2862.671601500001000
....................................................................................................................................................GACAGCGAAAGTAGCCATATCGAACAGCC...........................................................................2962.331401030001000
........................................AAGAAGAAAGGTAATGACACTGG.............................................................................................................................................................................................2332.3370700000000
..................................................................................................................................................................................................................................ATTCACATAGCTGGTGTCAAAGCTA.2562.171301300000000
.................................................................................................................................................................................TGAGCTCCTTCCATGGCAGGTAGT...................................................2462.171301100010010
.................................................................TGTCACACGTCGTCCCTGTGCCAAACGA...............................................................................................................................................................2832.0060200000400
.......................................CAAGAAGAAAGGTAATGACACT...............................................................................................................................................................................................2232.0060510000000
......................................CCAAGAAGAAAGGTAATGACACTGG.............................................................................................................................................................................................2532.0060510000000
........................................AAGAAGAAAGGTAATGACACTGGG............................................................................................................................................................................................2432.0060600000000
......................................................................................................................ACATTGAGTAGGCATAGCAAAGATC.............................................................................................................2532.0060000000600
.................................................................TGTCACACGTCGTCCCTGTGCCAAAC.................................................................................................................................................................2662.001201000000110
...................................................................TCACACGTCGTCCCTGTGCCAAACGA...............................................................................................................................................................2632.0060600000000
..................................................................................................................................................................................................................................ATTCACATAGCTGGTGTCAAAGCT..2461.831101100000000
....................................................................................................................................................GACAGCGAAAGTAGCCATATC...................................................................................2161.831101100000000
.........................TCAACGTCACCTCCCAAGAAGAAAGG.........................................................................................................................................................................................................2631.6750210000020
.................................................................................................................................................................................................................................TATTCACATAGCTGGTGTCAAAGCC..2561.67100910000000
.................................................................................................................................................................................................................................TATTCACATAGCTGGTGTCAAA.....2261.5090900000000
..........................................................................................................................TGAGTAGGCATAGCAAAGATC.............................................................................................................2161.5090500000400
...................................................................................................................................................TGACAGCGAAAGTAGCCATATC...................................................................................2261.3380510100100
..........................................................................................................................TGAGTAGGCATAGCAAAGATCTCAA.........................................................................................................2561.3380000000800
..................................................................................................................................................................................................................................ATTCACATAGCTGGTGTCAAAG....2261.3380800000000
....TCCACAGACGCAAACAGGGTATCAAC..............................................................................................................................................................................................................................2631.3340200000200
.......................................................................................................................CATTGAGTAGGCATAGCAAAGATC.............................................................................................................2431.3340000000103
.................................................................TGTCACACGTCGTCCCTGTG.......................................................................................................................................................................2061.3380800000000
.............................................................................................AAATGCTCAGCCTTGTCCACTCCC.......................................................................................................................................2461.1770610000000
.................................................................................................................................................................................TGAGCTCCTTCCATGGCAGGTA.....................................................2261.1770600000100
...................................................................TCACACGTCGTCCCTGTGCCAAACG................................................................................................................................................................2561.1770700000000
....................................TCCCAAGAAGAAAGGTAATGACACTG..............................................................................................................................................................................................2631.0030100000200
.......................................CAAGAAGAAAGGTAATGACACTGAA............................................................................................................................................................................................2531.0030000000300
............................................................................................AAAATGCTCAGCCTTGTCCACTC.........................................................................................................................................2331.0030210000000
......................................CCAAGAAGAAAGGTAATGACACTGGG............................................................................................................................................................................................2631.0030300000000
....TCCACAGACGCAAACAGGGTATCAACGT............................................................................................................................................................................................................................2831.0030300000000
...................................................................................TGCCAAACGAAAATGCTCAGCCTTG................................................................................................................................................2531.0030300000000
.......................................CAAGAAGAAAGGTAATGACA.................................................................................................................................................................................................2031.0030300000000
......CACAGACGCAAACAGGGTATCAACG.............................................................................................................................................................................................................................2531.0030200000100
...................................................................................TGCCAAACGAAAATGCTCAGCCTTGTC..............................................................................................................................................2731.0030300000000
...................................................................TCACACGTCGTCCCTGTGCCAAACGAAA.............................................................................................................................................................2831.0030300000000
.....................................................................................................................................................ACAGCGAAAGTAGCCATATCGAA................................................................................2361.0060600000000
.....................................................................................................................................................ACAGCGAAAGTAGCCATATCG..................................................................................2161.0060600000000
..........................................................................................................................TGAGTAGGCATAGCAAAGATCT............................................................................................................2261.0060500000100
...................................................................................TGCCAAACGAAAATGCTCAGCCTTGT...............................................................................................................................................2631.0030210000000
.................................................................TGTCACACGTCGTCCCTGTGC......................................................................................................................................................................2161.0060500001000
...................................................................................................................................................TGACAGCGAAAGTAGCCATATCGAACA..............................................................................2760.8350400000100
.................................................................................................................................................................................TGAGCTCCTTCCATGGCAGGTAGTGCC................................................2760.8350500000000
.................................................................................................................................................................................................................................TATTCACATAGCTGGTGTC........1960.6740300100000
.................................................................................................................................................................................................................................TATTCACATAGCTGGTGTCA.......2060.6740400000000
.................................................................TGTCACACGTCGTCCCTGTGCC.....................................................................................................................................................................2260.6740310000000
...................................................................................................TCAGCCTTGTCCACTCCCCACATTG................................................................................................................................2530.6720200000000
....................................................................................GCCAAACGAAAATGCTCAGCCTTG................................................................................................................................................2430.6720200000000
.......................................CAAGAAGAAAGGTAATGACACTGGGGC..........................................................................................................................................................................................2730.6720200000000
.............................................................................................AAATGCTCAGCCTTGTCCACTCC........................................................................................................................................2360.6740310000000
............................................................................................AAAATGCTCAGCCTTGTCCACTCCC.......................................................................................................................................2530.6720200000000
.................................................................TGTCACACGTCGTCCCTGTGCCAAA..................................................................................................................................................................2560.6740400000000
...............................................................................................................................................................TAGCCATATCGAACAGCCTGAGCTCC...................................................................2660.6740300000100
...................................................................................................................................................TGACAGCGAAAGTAGCCATATCGAACAGC............................................................................2960.6740310000000
......................................................TGACACTGGGGTGTCACACGTCG...............................................................................................................................................................................2330.6720100000100
........................................AAGAAGAAAGGTAATGACACTG..............................................................................................................................................................................................2230.6720200000000
......................................................................................................................................................................................TCCTTCCATGGCAGGTAGTGCCATC.............................................2560.6740400000000
............CGCAAACAGGGTATCAACGTCACC........................................................................................................................................................................................................................2430.6720200000000
....................................................................................................................................................GACAGCGAAAGTAGCCATATCGAAA...............................................................................2560.6740400000000
.....................................................................................................................................................ACAGCGAAAGTAGCCATATCGAAC...............................................................................2460.6740400000000
..............CAAACAGGGTATCAACGTCACCT.......................................................................................................................................................................................................................2330.6720200000000
...............................................................................................................................................................................................................................TCTATTCACATAGCTGGTGTCAAAGC...2660.6740310000000
........................................................................................................................................AAAGATCTCAATGACAGCGAAAGTAGC.........................................................................................2760.5030000000300
..................................................................................................................................................................................GAGCTCCTTCCATGGCAGGTAGTGC.................................................2560.5030300000000
..............................................................................................................................................................................................TGGCAGGTAGTGCCATCGAGCAAG......................................2460.5030300000000
....TCCACAGACGCAAACAGGGTA...................................................................................................................................................................................................................................2140.5020200000000
......................................................................................................................................................................................TCCTTCCATGGCAGGTAGTGCCATCGA...........................................2760.5030300000000
.................................................................................................................................................................................................................................TATTCACATAGCTGGTGTCAAAGA...2460.5030300000000
..................................................................GTCACACGTCGTCCCTGTG.......................................................................................................................................................................1960.5030300000000
....TCCACAGACGCAAACAGGGTATCA................................................................................................................................................................................................................................2440.5020200000000
....TCCACAGACGCAAACAGGGTATC.................................................................................................................................................................................................................................2340.5020200000000
.....................................................................................................................................................ACAGCGAAAGTAGCCATATCGAACA..............................................................................2560.5030300000000
................................................................................................TGCTCAGCCTTGTCCACTCCCCACA...................................................................................................................................2560.5030300000000
......................................................................................................................................................................................TCCTTCCATGGCAGGTAGTG..................................................2060.5030300000000
.............................................................................................................................................................AGTAGCCATATCGAACAGCCTGAGC......................................................................2560.5030000000300
................................................................................................................................................................................................................................CTATTCACATAGCTGGTGTCAAAGC...2560.5030300000000
...........................................................................................................................GAGTAGGCATAGCAAAGATC.............................................................................................................2060.5030000000300
..................................................................................................................................................................................................................................ATTCACATAGCTGGTGTCAAAGCC..2460.5030300000000
.......................................................................................................................................................................................CCTTCCATGGCAGGTAGTGCCATCGA...........................................2660.5030300000000
...........................................................................................................................GAGTAGGCATAGCAAAGATCT............................................................................................................2160.5030300000000
.....................................................................................................................................................ACAGCGAAAGTAGCCATATCGAACAG.............................................................................2660.3320200000000
.........................................AGAAGAAAGGTAATGACACTGGGG...........................................................................................................................................................................................2430.3310100000000
...................................................................................................................................................................................................................................TTCACATAGCTGGTGTCAAA.....2060.3320200000000
...............................................................................................................................................................................................................................TCTATTCACATAGCTGGTGTCAA......2360.3320200000000
....................................TCCCAAGAAGAAAGGTAATGACACTGGA............................................................................................................................................................................................2830.3310100000000
.........................................................................................ACGAAAATGCTCAGCCTTGTCCACT..........................................................................................................................................2530.3310010000000
................................................................................................TGCTCAGCCTTGTCCACTCCCCACAT..................................................................................................................................2630.3310100000000
.....................................................................................................................CACATTGAGTAGGCATAGCAAAGAT..............................................................................................................2530.3310100000000
.......ACAGACGCAAACAGGGTATCAACGTCACC........................................................................................................................................................................................................................2930.3310010000000
.......................................CAAGAAGAAAGGTAATGACAC................................................................................................................................................................................................2130.3310000000010
............................................................................................AAAATGCTCAGCCTTGTCCACTCCCCAC....................................................................................................................................2830.3310100000000
.................................................................................................................................................................................TGAGCTCCTTCCATGGCAGGTAGTGG.................................................2660.3320000200000
.........................................................................................ACGAAAATGCTCAGCCTTGTCCACTCCC.......................................................................................................................................2830.3310010000000
............................................................................GTCCCTGTGCCAAACGAAAATGC.........................................................................................................................................................2330.3310100000000
...................................................................................TGCCAAACGAAAATGCTCAGCCTTGC...............................................................................................................................................2630.3310100000000
..........................................................................................................................TGAGTAGGCATAGCAAAGAT..............................................................................................................2060.3320100001000
..............................................................................................................................................................................................TGGCAGGTAGTGCCATCGAGCAAGAGAG..................................2860.3320000000200
......................................................................................................................ACATTGAGTAGGCATAGCAAAGA...............................................................................................................2330.3310000000100
...................................................................................................TCAGCCTTGTCCACTCCCCACAT..................................................................................................................................2330.3310010000000
...........ACGCAAACAGGGTATCAACGTCACA........................................................................................................................................................................................................................2530.3310100000000
.......................TATCAACGTCACCTCCCAAG.................................................................................................................................................................................................................2030.3310100000000
.....................................................................................CCAAACGAAAATGCTCAGCCTTGTCCAC...........................................................................................................................................2830.3310100000000
...........................................................................................................................................................................................................CATCGAGCAAGAGAGTGCCTT............................2160.3320200000000
............................................................................................AAAATGCTCAGCCTTGTCCACTCCCCACA...................................................................................................................................2930.3310100000000
....................................................................................GCCAAACGAAAATGCTCAGCCTTGTC..............................................................................................................................................2630.3310100000000
.........................................................................................ACGAAAATGCTCAGCCTTGTCCAC...........................................................................................................................................2430.3310100000000
...............................................................................................................................................................................................................................TCTATTCACATAGCTGGTGTCAAAG....2560.3320200000000
..................................................................................................CTCAGCCTTGTCCACTCCCCACAT..................................................................................................................................2430.3310100000000
..........................................GAAGAAAGGTAATGACACTGG.............................................................................................................................................................................................2130.3310100000000
...............................................................................................................................................................TAGCCATATCGAACAGCCTGAGCTCCT..................................................................2760.3320200000000
..............................................................................................................................TAGGCATAGCAAAGATCTCAATGAC.....................................................................................................2560.3320000000200
..........................................................................................CGAAAATGCTCAGCCTTGTCCACTCC........................................................................................................................................2630.3310100000000
..............CAAACAGGGTATCAACGTCA..........................................................................................................................................................................................................................2030.3310100000000
.................................................................TGTCACACGTCGTCCCTGTGCCA....................................................................................................................................................................2360.3320200000000
.................................................................................TGTGCCAAACGAAAATGCTCAGCCTTG................................................................................................................................................2730.3310100000000
..........................CAACGTCACCTCCCAAGA................................................................................................................................................................................................................1830.3310100000000
...........................................................................CGTCCCTGTGCCAAACGAAAATGC.........................................................................................................................................................2430.3310100000000
..........................................................................TCGTCCCTGTGCCAAACGAAAATGC.........................................................................................................................................................2530.3310100000000
...............................................................................................................................................................................................................GAGCAAGAGAGTGCCTTCTATA.......................2260.3320000000200
.............GCAAACAGGGTATCAACGTCACCT.......................................................................................................................................................................................................................2430.3310000100000
...........................................................................................GAAAATGCTCAGCCTTGTCCACTCCC.......................................................................................................................................2630.3310100000000
...........................................AAGAAAGGTAATGACACTGGGG...........................................................................................................................................................................................2230.3310100000000
.................................................................................TGTGCCAAACGAAAATGCTCAGCC...................................................................................................................................................2430.3310100000000
.......................................CAAGAAGAAAGGTAATGACACTGGT............................................................................................................................................................................................2530.3310010000000
.......................................................................................AAACGAAAATGCTCAGCCTTGTCCAC...........................................................................................................................................2630.3310100000000
...................................................................................................TCAGCCTTGTCCACTCCCCACATTGAG..............................................................................................................................2730.3310000100000
....TCCACAGACGCAAACAGGGTATCAA...............................................................................................................................................................................................................................2530.3310100000000
...........................................................................................GAAAATGCTCAGCCTTGTCCACTCCCCA.....................................................................................................................................2830.3310100000000
...................................................................TCACACGTCGTCCCTGTGCCAAACGAA..............................................................................................................................................................2730.3310000000100
...................................................................................................................CCCACATTGAGTAGGCATAGCAAAGATC.............................................................................................................2830.3310001000000
...............................TCACCTCCCAAGAAGAAAGGTAATGAC..................................................................................................................................................................................................2730.3310100000000
..........................CAACGTCACCTCCCAAGAAGAAAGG.........................................................................................................................................................................................................2530.3310100000000
...................................................................................TGCCAAACGAAAATGCTCAGCC...................................................................................................................................................2230.3310100000000
.......ACAGACGCAAACAGGGTATCAA...............................................................................................................................................................................................................................2230.3310000000100
.......................TATCAACGTCACCTCCCAAGAAGAAAGG.........................................................................................................................................................................................................2830.3310100000000
...................................................................................TGCCAAACGAAAATGCTCAGCCTTGTCC.............................................................................................................................................2830.3310100000000
...................................................................................................................................................TGACAGCGAAAGTAGCCATAT....................................................................................2160.3320200000000
....................................TCCCAAGAAGAAAGGTAATGACACTGG.............................................................................................................................................................................................2730.3310100000000
......................................................TGACACTGGGGTGTCACACGTCGTCC............................................................................................................................................................................2630.3310100000000
............................................................................................AAAATGCTCAGCCTTGTCCACTCC........................................................................................................................................2430.3310100000000
....................................TCCCAAGAAGAAAGGTAATGACACT...............................................................................................................................................................................................2530.3310100000000
...........................................AAGAAAGGTAATGACACTGG.............................................................................................................................................................................................2030.3310100000000
..........................CAACGTCACCTCCCAAGAAGAA............................................................................................................................................................................................................2230.3310100000000
.....................................................................................CCAAACGAAAATGCTCAGCCTTGT...............................................................................................................................................2430.3310100000000
............................................................................................AAAATGCTCAGCCTTGTCCACTCCCC......................................................................................................................................2630.3310100000000
............................................................................................AAAATGCTCAGCCTTGTCC.............................................................................................................................................1930.3310100000000
.......................................CAAGAAGAAAGGTAATGACACTGGGA...........................................................................................................................................................................................2630.3310100000000
...............................................................................................................................................................................................................................TCTATTCACATAGCTGGTGTCAAA.....2460.3320200000000
..................................................................GTCACACGTCGTCCCTGTGCCAAACGA...............................................................................................................................................................2730.3310100000000
.......................................................................................AAACGAAAATGCTCAGCCTTG................................................................................................................................................2130.3310100000000
...................................................................................TGCCAAACGAAAATGCTCAGCCT..................................................................................................................................................2330.3310100000000
...................................................................................................................................................................................................................................TTCACATAGCTGGTGTCAAAG....2160.3320200000000
.....................................................................ACACGTCGTCCCTGTGCCAAACGAAA.............................................................................................................................................................2630.3310100000000
............................................................................................AAAATGCTCAGCCTTGTCCACTCCCCA.....................................................................................................................................2730.3310100000000
......................................................................................................................................................................................TCCTTCCATGGCAGGTAGTGC.................................................2160.3320200000000
.........................................AGAAGAAAGGTAATGACACTGG.............................................................................................................................................................................................2230.3310100000000
.................................................................................................................................................................................TGAGCTCCTTCCATGGCAGGTAGTT..................................................2560.3320200000000
..........................................................................................................TGTCCACTCCCCACATTGAGTAGGCA........................................................................................................................2630.3310100000000
......................................................................................................................................................................................TCCTTCCATGGCAGGTAGTGCCATCG............................................2660.3320100000100
.......................TATCAACGTCACCTCCCAAGAAGA.............................................................................................................................................................................................................2430.3310100000000
................................................................................................TGCTCAGCCTTGTCCACTCCCCA.....................................................................................................................................2360.3320200000000
..................................................................................................................CCCCACATTGAGTAGGCAT.......................................................................................................................1930.3310100000000
................................................................................................................................................................................................................................CTATTCACATAGCTGGTGTCAAAGCTA.2760.3320200000000
.......ACAGACGCAAACAGGGTATCAACGT............................................................................................................................................................................................................................2530.3310000100000
.......................................CAAGAAGAAAGGTAATGACACTGGGGTG.........................................................................................................................................................................................2830.3310100000000
...................................................................................TGCCAAACGAAAATGCTCAG.....................................................................................................................................................2030.3310100000000
..........................................................................................................................TGAGTAGGCATAGCAAAGATCTC...........................................................................................................2360.3320100000100
.......................................CAAGAAGAAAGGTAATGACACTGGAA...........................................................................................................................................................................................2630.3310100000000
.................................................................TGTCACACGTCGTCCCTGTGCCAAACGAA..............................................................................................................................................................2930.3310100000000
.................................................................................................................................................................................................................................TATTCACATAGCTGGTGTCAAAGT...2460.3320200000000
.....................................................................................................................................................ACAGCGAAAGTAGCCATATCGAACAGC............................................................................2760.3320200000000
...CTCCACAGACGCAAACAGGGTATCA................................................................................................................................................................................................................................2540.2510100000000
GAACTCCACAGACGCAAACAGGG.....................................................................................................................................................................................................................................2340.2510100000000
....TCCACAGACGCAAACAGGG.....................................................................................................................................................................................................................................1940.2510100000000
.................................................................................................................................................................................TGAGCTCCTTCCATGGCAGGTAGTGCA................................................2760.1710100000000
.............................................................................................................................................................................................................TCGAGCAAGAGAGTGCCTTT...........................2060.1710100000000
...................................................................................................................................................TGACAGCGAAAGTAGCCAC......................................................................................1960.1710100000000
..........................................................................................................................................................GAAAGTAGCCATATCGAACC..............................................................................2060.1710100000000
........................................................................................................................................................................................................TGCCATCGAGCAAGAGAGTGCCTT............................2460.1710100000000
..................................................................................................................................................................................GAGCTCCTTCCATGGCAGGTA.....................................................2160.1710100000000
....................................................................................................................................................GACAGCGAAAGTAGCCATATCGAACAA.............................................................................2760.1710100000000
..........................................................................................................................TGAGTAGGCATAGCAAAGA...............................................................................................................1960.1710100000000
.............................................................................................................................................................................................................................CTTCTATTCACATAGCTGGTG..........2160.1710100000000
............................................................TGGGGTGTCACACGTCGTCCCTGT........................................................................................................................................................................2460.1710100000000
..........................................................................................................................TGAGTAGGCATAGCAAAGATCTCA..........................................................................................................2460.1710000000100
.................................................................TGTCACACGTCGTCCCTGTGCCAAAA.................................................................................................................................................................2660.1710100000000
.....................................................................................................................................................................................................................................CACATAGCTGGTGTCAAAG....1960.1710100000000
.....................................................................................................................................................................TATCGAACAGCCTGAGCTCCT..................................................................2160.1710100000000
....................................................................................................................................................GACAGCGAAAGTAGCC........................................................................................1660.1710000000100
............................................................................................................................................................................CAGCCTGAGCTCCTTCCATGGCA.........................................................2360.1710100000000
..........................................................................................................................................................................................................................TGCCTTCTATTCACATAGCTGGTG..........2460.1710100000000
.......................................................................................................................................................................................................GTGCCATCGAGCAAGAGAGTG................................2160.1710100000000
................................................................................................TGCTCAGCCTTGTCCACTCC........................................................................................................................................2060.1710100000000
...................................................................................................................................................................................................GGTAGTGCCATCGAGCAAGAGA...................................2260.1710100000000
....................................................................................................CAGCCTTGTCCACTCCCCAC....................................................................................................................................2060.1710100000000
...........................................................................................................................................................................ACAGCCTGAGCTCCTTCCATGGCAGG.......................................................2660.1710100000000
...........................................................................................................................................................................................................CATCGAGCAAGAGAGTGCCTTCTAT........................2560.1710100000000
.....................................................................................................................................................................TATCGAACAGCCTGAGCTCCTTCCA..............................................................2560.1710000000100
..........................................................................................................................TGAGTAGGCATAGCAAAGATCTTT..........................................................................................................2460.1710100000000
............................................................................................................................................ATCTCAATGACAGCGAAAGTAGCC........................................................................................2460.1710010000000
droVir3
C--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATGTAAAAGAAATSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droTak1
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACCTCCATCCTTGGAGGACAGTGCCCTCCAGCAGGAAGGTACCACCACTGCAAGTAGCTAGCACTACAGAGATSizeHit CountTotal NormTotal
No Reads
dm3
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGCTGCCTCCATGGAAAATCGTGCCCCAGAGCCGTAGAGCACCTCCTATACTCGTCAATGATGTAAAGGAAATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
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droSim2
C--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGCTGCCACCTTGGAAACTGGTGCCACTAAGCTGCAGAGCGCCACCCATACTCGTTGACGACGTCAAAGAAATSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................................................................................................................................................................................................................TGCAGAGCGCCACCCATACTCGTTGAC..............273125.673770051890122511181242000000
.............................................................................................................................................................................................TTGGAAACTGGTGCCACTAAGCTGC......................................252125.002500013006573141311520000
.........................................................................................................................................................................................CACCTTGGAAACTGGTGCCACTAAGC.........................................262117.0023400030023250194700000
...........................................................................................................................................................................................................................GCCACCCATACTCGTTGACGACGTC........252102.50205000000855749131000000
.............................................................................................................................................................................................TTGGAAACTGGTGCCACTAAGCTGCA.....................................26266.501330001000610001250000
..............................................................................................................................................................................................TGGAAACTGGTGCCACTAAGCTGC......................................24249.509900070038427414320000
......................................................................................................................................................................................................................AGAGCGCCACCCATACTCGTTGACGA............26341.00123001200262049201040000
...........................................................................................................................................................................................................................GCCACCCATACTCGTTGACGACGTCAAAG....29238.0076000000855760000000
.........................................................................................................................................................................................CACCTTGGAAACTGGTGCCACTAA...........................................24234.0068000000300065000000
..................................................................................................................................................................................................................................ATACTCGTTGACGACGTCAAAGA...23232.50650000004801700000000
...................................................................................................................................................................................................................TGCAGAGCGCCACCCATACTCGTTGACGA............29327.338200030035211841000000
.........................................................................................................................................................................................CACCTTGGAAACTGGT...................................................16227.0054000000000054000000
...................................................................................................................................................................................................................................TACTCGTTGACGACGTCAAAG....21225.00500022801111196000000
........................................................................................................................................................................................................................AGCGCCACCCATACTCGTTGACGACGTC........28221.00420000001661340030000
..............................................................................................................................................................................................................................ACCCATACTCGTTGACGACGTCAAAGA...27219.00380000008141231000000
........................................................................................................................................................................................................TGCCACTAAGCTGCAGAGCGCCACCCA.........................27318.00540000003031400070000
........................................................................................................................................................................................................................AGCGCCACCCATACTCGTTGACGACGT.........27218.00360000001051271010000
.............................................................................................................................................................................................TTGGAAACTGGTGCCACTAAGCTG.......................................24217.0034000000170210230000
..............................................................................................................................................................................................TGGAAACTGGTGCCACTAAGCTGCA.....................................25213.0026000500412220100000
...........................................................................................................................................................................................................................GCCACCCATACTCGTTGACGACGTCAAA.....28212.5025000000713230000000
......................................................................................................................................................................................................................AGAGCGCCACCCATACTCGTTGACGACGTC........30212.50250000001021210000000
......................................................................................................................................................................................................................AGAGCGCCACCCATACTCGTTGACGAC...........27212.5025002000411223010000
.........................................................................................................................................................................................CACCTTGGAAACTGGTGCCACTAAG..........................................25212.0024000000310020000000
.................................................................................................................................................................................TGAGCTGCCACCTTGGAAACTGG....................................................23210.502100000096411000000
..........................................................................................................................................................................................................................CGCCACCCATACTCGTTGACGACGTC........26210.502100000064801020000
.............................................................................................................................................................................................TTGGAAACTGGTGCCACTAAGCTGCAA....................................27210.5021000000000000210000
.......................................................................................................................................................................................................................GAGCGCCACCCATACTCGTTGACGACGTC........29210.5021000100611210000000
.............................................................................................................................................................................................................................CACCCATACTCGTTGACGACGTCAAAG....27210.0020000000113231000000
..............................................................................................................................................................................................................................ACCCATACTCGTTGACGACGTCAAAG....26210.0020000000311510000000
......................................................................................................................................................................................................................AGAGCGCCACCCATACTCGTTGACGAT...........2729.001800000073511010000
...............................................................................................................................................................................................................................CCCATACTCGTTGACGACGTCAAAGA...2629.001800000046611000000
..............................................................................................................................................................................................................................ACCCATACTCGTTGACGACGTCAAA.....2529.001800000049410000000
.............................................................................................................................................................................................TTGGAAACTGGTGCCACTAAGCTGCAT....................................2728.5017000000000000170000
..................................................................................................................................................................................................................................ATACTCGTTGACGACGTCAAAG....2228.501700000090503000000
.......................................................................................................................................................................................................................GAGCGCCACCCATACTCGTTGACGACGT.........2828.001600010041730000000
.............................................................................................................................................................................................TTGGAAACTGGTGCCACTAAGCTGA......................................2528.0016000000000000160000
........................................................................................................................................................................................................TGCCACTAAGCTGCAGAGCGCCAC............................2438.0024000000102000210000
......................................................................................................................................................................................................................AGAGCGCCACCCATACTCGTTGACGACG..........2827.501500120800100030000
........................................................................................................................................................................................................................................GTTGACGACGTCAAAG....1637.3322000000000022000000
.............................................................................................................................................................................................................................CACCCATACTCGTTGACGACGTCAAAGA...2827.001400000062420000000
...................................................................................................................................................................................................................................TACTCGTTGACGACGTCAA......1927.0014000000101012000000
.............................................................................................................................................................................................................................CACCCATACTCGTTGACGACGTCAAA.....2627.001400000044411000000
...................................................................................................................................................................................................................TGCAGAGCGCCACCCATACTCGTTGA...............2636.672000060021405200000
..................................................................................................................................................................................................................................ATACTCGTTGACGACGTCAAAGAA..2426.501300000091300000000
.........................................................................................................................................................................................................................GCGCCACCCATACTCGTTGACGACGTC........2726.501300000002720020000
.........................................................................................................................................................................................CACCTTGGAAACTGGTGCCACT.............................................2226.501300022000009000000
..............................................................................................................................................................................................................TAAGCTGCAGAGCGCCACCCATACTCGT..................2836.3319000100120030120000
.....................................................................................................................................................................................................TGGTGCCACTAAGCTGCAGAGCGCC..............................2526.0012000000000012000000
..........................................................................................................................................................................................................................CGCCACCCATACTCGTTGACGACGTCAAAG....3026.001200000046200000000
...........................................................................................................................................................................................................................GCCACCCATACTCGTTGACGACGTCAA......2725.501100000015221000000
...........................................................................................................................................................................................................................GCCACCCATACTCGTTGACGACGT.........2425.501100000031410020000
...................................................................................................................................................................................................................TGCAGAGCGCCACCCATACTCGTTGACG.............2835.331600020074003000000
.............................................................................................................................................................................................TTGGAAACTGGTGCCACTAAGCTGCT.....................................2625.0010000000000000100000
.........................................................................................................................................................................................CACCTTGGAAACTGGTGCCACTA............................................2325.0010000000000010000000
......................................................................................................................................................................................................................AGAGCGCCACCCATACTCGTTGACGACGT.........2925.001000000011520010000
......................................................................................................................................................................................................................AGAGCGCCACCCATACTCGTTGAC..............2435.001500000051405000000
......................................................................................................................................................................................................................AGAGCGCCACCCATACTCGTTGACG.............2535.0015000100112100000000
............................................................................................................................................................................................................ACTAAGCTGCAGAGCGCCACCCAT........................2435.0015000015000000000000
..............................................................................................................................................................................................................................ACCCATACTCGTTGACGACGTCAAAGAA..2824.50900000022311000000
..........................................................................................................................................................................................................................CGCCACCCATACTCGTTGACGACGT.........2524.50900000013201020000
...................................................................................................................................................................................................................................TACTCGTTGACGACGTCAAAGAAAT2524.50900008000100000000
.................................................................................................................................................................................TGAGCTGCCACCTTGGAAACTGGTGC.................................................2624.50900000021402000000
.........................................................................................................................................................................................................................GCGCCACCCATACTCGTTGACGACGT.........2624.50900000011412000000
.............................................................................................................................................................................................TTGGAAACTGGTGCCACTAAGCT........................................2324.50900000012030030000
.......................................................................................................................................................................................................................GAGCGCCACCCATACTCGTTGACGA............2534.331300000032610010000
...................................................................................................................................................................................................................................TACTCGTTGACGACGTCAAAGA...2224.00800000010610000000
........................................................................................................................................................................................................TGCCACTAAGCTGCAGAGCGCCACCC..........................2633.671100000001600040000
.............................................................................................................................................................................................................................CACCCATACTCGTTGACGACGTC........2323.50700100030002010000
..............................................................................................................................................................................................TGGAAACTGGTGCCACTAAGCTG.......................................2323.50700000001302010000
.................................................................................................................................................................................TGAGCTGCCACCTTGGAAACTGGT...................................................2423.50700000010410010000
...................................................................................................................................................................................................................................TACTCGTTGACGACGTCAAA.....2023.50700000004021000000
...............................................................................................................................................................................................................................CCCATACTCGTTGACGACGTCAAAG....2523.50700000005011000000
...........................................................................................................................................................................................................................GCCACCCATACTCGTTGACGACGTCA.......2623.50700000013120000000
...................................................................................................................................................................................................................TGCAGAGCGCCACCCATACTCG...................2233.331000009010000000000
..............................................................................................................................................................................................TGGAAACTGGTGCCACTAAGCTGCAGA...................................2723.00600020031000000000
..............................................................................................................................................................................................................................ACCCATACTCGTTGACGACGTC........2223.00600100001111010000
..............................................................................................................................................................................................................TAAGCTGCAGAGCGCCACCCATACTC....................2633.00900010010300040000
...........................................................................................................................................................................................................................GCCACCCATACTCGTTGACGACG..........2323.00600000011111010000
..............................................................................................................................................................................................................................ACCCATACTCGTTGACGACGTCAAAGAAA.2923.00600000020400000000
.............................................................................................................................................................................................TTGGAAACTGGTGCCACTAAGCTGT......................................2523.00600000000000060000
..............................................................................................................................................................................................TGGAAACTGGTGCCACTAAGC.........................................2123.00600004000011000000
.....................................................................................................................................................................................................TGGTGCCACTAAGCTGCAGAGCGCCAC............................2723.00600000000005010000
..............................................................................................................................................................................................TGGAAACTGGTGCCACTAAGCTGCAG....................................2623.00600010010300100000
...........................................................................................................................................................................................................CACTAAGCTGCAGAGC.................................1633.00900000025200000000
.........................................................................................................................................................................................CACCTTGGAAACTGGTG..................................................1723.00600000000006000000
..............................................................................................................................................................................................................................ACCCATACTCGTTGACGACGTCAA......2423.00600000040101000000
.........................................................................................................................................................................................CACCTTGGAAACTGGTGCCACTAAGCT........................................2723.00600000000006000000
..................................................................................................................................................................................................................................ATACTCGTTGACGACGTCAAA.....2123.00600000031101000000
.........................................................................................................................................................................................CACCTTGGAAACTGGTGCCA...............................................2023.00600000000006000000
.................................................................................................................................................................................TGAGCTGCCACCTTGGAAACTGGTGCC................................................2723.00600000013200000000
.............................................................................................................................................................................................TTGGAAACTGGTGCCACTA............................................1923.00600006000000000000
.........................................................................................................................................................................................CACCTTGGAAACTGGTGCC................................................1923.00600000000006000000
........................................................................................................................................................................................................TGCCACTAAGCTGCAGAGCGCCACCCAT........................2832.67800000031010030000
...................................................................................................................................................................................................................TGCAGAGCGCCACCCATACTCGTTGACA.............2832.67800000020312000000
..........................................................................................................................................................................................................................CGCCACCCATACTCGTTGACGACG..........2422.50500110010000020000
..........................................................................................................................................................................................ACCTTGGAAACTGGTGCCACTAAGC.........................................2522.50500000000005000000
...................................................................................................................................................................................................................................TACTCGTTGACGACGTCAAAGT...2222.50500000002210000000
..................................................................................................................................................................................................................................ATACTCGTTGACGACGTCAA......2022.50500000000104000000
.....................................................................................................................................................................................................TGGTGCCACTAAGCTGCAGAGCGCCA.............................2622.50500000000005000000
.............................................................................................................................................................................................TTGGAAACTGGTGCCACTAAGC.........................................2222.50500002002000010000
..............................................................................................................................................................................................................................ACCCATACTCGTTGACGACGTCAAAGT...2722.50500000003011000000
.........................................................................................................................................................................................CACCTTGGAAACTGGTGCCACTAAT..........................................2522.50500000000005000000
.........................................................................................................................................................................................CACCTTGGAAACTGGTGCCACTAAA..........................................2522.50500000000005000000
.............................................................................................................................................................................................................................CACCCATACTCGTTGACGACGTCAA......2522.50500000014000000000
..................................................................................................................................................................................................................................ATACTCGTTGACGACGTCAAAGAAA.2522.50500000030200000000
.........................................................................................................................................................................................CACCTTGGAAACTGGTGCCACTAAGT.........................................2622.50500000000005000000
...................................................................................................................................................................................................................TGCAGAGCGCCACCCATACT.....................2032.33700000000007000000
........................................................................................................................................................................................................TGCCACTAAGCTGCAGAGCGCCACC...........................2532.33700000020300020000
...........................................................................................................................................................................................................CACTAAGCTGCAGAGCGC...............................1832.33700000006001000000
...................................................................................................................................................................................................................TGCAGAGCGCCACCCATA.......................1832.33700000000007000000
.......................................................................................................................................................................................................GTGCCACTAAGCTGCAGAGCGCC..............................2332.00600000000006000000
.....................................................................................................................................................................................................TGGTGCCACTAAGCTGCAGAGCGC...............................2422.00400110000002000000
..............................................................................................................................................................................................TGGAAACTGGTGCCACTAAGCTGCAGAG..................................2822.00400000010300000000
.......................................................................................................................................................................................................................GAGCGCCACCCATACTCGTTGACGACG..........2722.00400000000110020000
.........................................................................................................................................................................................CACCTTGGAAACTGG....................................................1522.00400000010003000000
.............................................................................................................................................................................................TTGGAAACTGGTGCCACTAAG..........................................2122.00400002000001010000
...............................................................................................................................................................................................................................CCCATACTCGTTGACGACGTCAAA.....2422.00400000011110000000
.......................................................................................................................................................................................................................GAGCGCCACCCATACTCGTTGACGAC...........2622.00400000010010020000
.........................................................................................................................................................................................CACCTTGGAAACTGGTGC.................................................1822.00400000000004000000
...................................................................................................................................................................................................................TGCAGAGCGCCACCCATACTCGT..................2332.00600000030003000000
...................................................................................................................................................................................................................TGCAGAGCGCCACCCATACTCGTT.................2432.00600000000006000000
...................................................................................................................................................................................................................................TACTCGTTGACGACGTCAAAGAAA.2422.00400000000300010000
..............................................................................................................................................................................................TGGAAACTGGTGCCACTAAGCTGCAA....................................2622.00400000000000040000
........................................................................................................................................................................................................................AGCGCCACCCATACTCGTTGACGACGTT........2822.00400000030000010000
.........................................................................................................................................................................................CACCTTGGAAACTGGTGCCACTAAC..........................................2522.00400000000004000000
...................................................................................................................................................................................................................TGCAGAGCGCCACCCATACTCGTTGAA..............2732.00600000000303000000
........................................................................................................................................................................................................TGCCACTAAGCTGCAGAGCGCCACCCATA.......................2931.67500000040100000000
..............................................................................................................................................................................................................TAAGCTGCAGAGCGCCACCCATAC......................2431.67500000000000050000
..............................................................................................................................................................................................................................ACCCATACTCGTTGACGA............1831.67500300000002000000
..................................................................................................................................................................................................................................ATACTCGTTGACGACGTCAAAGAAAT2621.50300000030000000000
.........................................................................................................................................................................................................................GCGCCACCCATACTCGTTGACGACGTCT.......2821.50300000021000000000
.............................................................................................................................................................................................TTGGAAACTGGTGCCACT.............................................1821.50300002000001000000
................................................................................................................................................................................................................................CCATACTCGTTGACGACGTCAAAGA...2521.50300000030000000000
..............................................................................................................................................................................................................................ACCCATACTCGTTGACGACGTCAAAGTT..2821.50300000010110000000
..............................................................................................................................................................................................TGGAAACTGGTGCCACTAAGCT........................................2221.50300010010001000000
............................................................................................................................................................................................CTTGGAAACTGGTGCCACTAAGCTGC......................................2621.50300000000012000000
............................................................................................................................................................................................CTTGGAAACTGGTGCCACTAAGC.........................................2321.50300000000003000000
...................................................................................................................................................................................................................................TACTCGTTGACGACGTCAAT.....2021.50300000001020000000
.........................................................................................................................................................................................................................GCGCCACCCATACTCGTTGACGACGTCAAAG....3121.50300000012000000000
..........................................................................................................................................................................................................................CGCCACCCATACTCGTTGACGACGTCAAA.....2921.50300000002010000000
........................................................................................................................................................................................................................AGCGCCACCCATACTCGTTGACGACGTCA.......2921.50300000012000000000
...........................................................................................................................................................................................................................GCCACCCATACTCGTTGACGACGTCT.......2621.50300000001011000000
...................................................................................................................................................................................................ACTGGTGCCACTAAGCTGCAGAGCGC...............................2621.50300000000003000000
.............................................................................................................................................................................................................................CACCCATACTCGTTGACGACGTCAAAGAA..2921.50300000011100000000
...............................................................................................................................................................................................................................CCCATACTCGTTGACGACGTCAAAGAAA.2821.50300000011100000000
.................................................................................................................................................................................................................................CATACTCGTTGACGACGTCAAAG....2321.50300000002010000000
........................................................................................................................................................................................................................AGCGCCACCCATACTCGTTGACG.............2331.33400000020001010000
...................................................................................................................................................................................................................TGCAGAGCGCCACCCATACTCGTTG................2531.33400010010001100000
........................................................................................................................................................................................................TGCCACTAAGCTGCAGA...................................1731.33400000001201000000
...................................................................................................................................................................................................................TGCAGAGCGCCACCCAT........................1731.33400000000004000000
...........................................................................................................................................................................................................CACTAAGCTGCAGAGCGCC..............................1931.33400000003001000000
......................................................................................................................................................................................................................AGAGCGCCACCCATACTC....................1831.33400000000004000000
.......................................................................................................................................................................................................................GAGCGCCACCCATACTCGTTGACG.............2431.33400000040000000000
.................................................................................................................................................................................TGAGCTGCCACCTTGGAAACT......................................................2121.00200000001001000000
..............................................................................................................................................................................................................TAAGCTGCAGAGCGCCACCCATACT.....................2531.00300000000000030000
...........................................................................................................................................................................................................................GCCACCCATACTCGTT.................1631.00300000000003000000
..................................................................................................................................................................................................................CTGCAGAGCGCCACCC..........................1631.00300000010002000000
.................................................................................................................................................................................................................................CATACTCGTTGACGACGTCAAAGAAA.2621.00200000020000000000
.........................................................................................................................................................................................................................GCGCCACCCATACTCGTTGACGACGTCAATA....3121.00200000002000000000
........................................................................................................................................................................................................TGCCACTAAGCTGCAGAGCGCCA.............................2331.00300000010100010000
..............................................................................................................................................................................................................................ACCCATACTCGTTGACGACG..........2021.00200000000002000000
.......................................................................................................................................................................................................GTGCCACTAAGCTGCAGAGCGC...............................2231.00300000000003000000
.........................................................................................................................................................................................................................GCGCCACCCATACTCGTTGACGAC...........2421.00200000001010000000
...........................................................................................................................................................................................................................GCCACCCATACTCGTTGACGATT..........2321.00200000011000000000
.......................................................................................................................................................................................................................GAGCGCCACCCATACTCGTTGACGACGTCA.......3021.00200000002000000000
.........................................................................................................................................................................................CACCTTGGAAACTGGTGCCACTAAGCTG.......................................2821.00200000000002000000
...................................................................................................................................................................................................................................TACTCGTTGACGACGTCAATT....2121.00200010000010000000
...........................................................................................................................................................................................................................GCCACCCATACTCGTTGACGATA..........2321.00200000011000000000
.......................................................................................................................................................................................................................GAGCGCCACCCATACTCGTTGACGACGTT........2921.00200000010100000000
...............................................................................................................................................................................................................................CCCATACTCGTTGACGA............1731.00300000000003000000
..............................................................................................................................................................................................................TAAGCTGCAGAGCGCCACCCATACTCG...................2731.00300000000102000000
...............................................................................................................................................................................................................................CCCATACTCGTTGACGACGTCAAAGAA..2721.00200000011000000000
............................................................................................................................................................................................................ACTAAGCTGCAGAGCGC...............................1731.00300000002010000000
.................................................................................................................................................................................................................................CATACTCGTTGACGACGTCAAAGT...2421.00200000011000000000
..............................................................................................................................................................................................................................ACCCATACTCGTTGACGAC...........1921.00200000000002000000
.......................................................................................................................................................................................................................GAGCGCCACCCATACTCGTTGACGACGTA........2921.00200000010100000000
..........................................................................................................................................................................................ACCTTGGAAACTGGTGCCACTAA...........................................2321.00200000000002000000
...........................................................................................................................................................................................................................GCCACCCATACTCGTTGACGAT...........2221.00200000000200000000
...............................................................................................................................................................................................................................CCCATACTCGTTGACGACGTCATT.....2421.00200000000110000000
...........................................................................................................................................................................................................CACTAAGCTGCAGAGCGCCACCCA.........................2431.00300000010110000000
.........................................................................................................................................................................................CACCTTGGAAACTGGTGCCAC..............................................2121.00200000000002000000
......................................................................................................................................................................................................................AGAGCGCCACCCATACTCGTTGACGATA..........2821.00200000000200000000
......................................................................................................................................................................................................................AGAGCGCCACCCATACTCGTT.................2131.00300000000003000000
..............................................................................................................................................................................................................................ACCCATACTCGTTGACGACGTCAAAGATT.2921.00200000002000000000
..............................................................................................................................................................................................TGGAAACTGGTGCCACTAAG..........................................2021.00200000001001000000
.............................................................................................................................................................................................................................CACCCATACTCGTTGACGACGTCATT.....2621.00200000000020000000
.............................................................................................................................................................................................................................CACCCATACTCGTTGACGACG..........2121.00200000020000000000
......................................................................................................................................................................................TGCCACCTTGGAAACTGG....................................................1821.00200000000002000000
..........................................................................................................................................................................................................................CGCCACCCATACTCGTTGACGAC...........2321.00200100000100000000
droSec2
C--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGCTGCCACCTTGGAAACTTGTGCCACTAAGCTGCAGAGCGCCACCCATTCTCGTTGACGATGTCAAAGAAATSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
........................................................................................................................................................................................CCACCTTGGAAACTTGTGCCACTA............................................24181.112018011
........................................................................................................................................................................................CCACCTTGGAAACTTGTGCCACTAAGC.........................................27181.061915121
...................................................................................................................................................................................................................TGCAGAGCGCCACCCATTCTCGTTGACG.............2811.0010001
........................................................................................................................................................................................CCACCTTGGAAACTTGTGCCACT.............................................23180.941713031
........................................................................................................................................................................................CCACCTTGGAAACTTGTGCCACTAAG..........................................26180.5097002
........................................................................................................................................................................................CCACCTTGGAAACTTGTGCCAC..............................................22180.3364020
........................................................................................................................................................................................CCACCTTGGAAACTTGTGCCACTAA...........................................25180.2855000
........................................................................................................................................................................................CCACCTTGGAAACTTGTGCCA...............................................21180.1732010
.............................................................................................................................................................................................TTGGAAACTTGTGCCACTAAGCT........................................23190.1630030
........................................................................................................................................................................................CCACCTTGGAAACTTGTGCCACTT............................................24180.1122000
........................................................................................................................................................................................................TGCCACTAAGCTGCAGAGCG................................20200.1020011
........................................................................................................................................................................................CCACCTTGGAAACTTGTGCC................................................20200.1020020
......................................................................................................................................................................................................TGTGCCACTAAGCTGCAGAGCGCCACCC..........................28120.0810010
......................................................................................................................................................................................................TGTGCCACTAAGCTGCAGAGCGCCAC............................26130.0811000
......................................................................................................................................................................................TGCCACCTTGGAAACTTGTGCCAC..............................................24180.0611000
.........................................................................................................................................................................................CACCTTGGAAACTTGTGCCACTAAGC.........................................26180.0611000
.........................................................................................................................................................................................CACCTTGGAAACTTGTGCCACT.............................................22180.0611000
........................................................................................................................................................................................CCACCTTGGAAACTTGTGCCACTAT...........................................25180.0611000
..............................................................................................................................................................................................TGGAAACTTGTGCCACTAAGCTGC......................................24190.0511000
.................................................................................................................................................................................TGAGCTGCCACCTTGGAAACTTG....................................................23190.0511000
........................................................................................................................................................................................CCACCTTGGAAACTTGTGC.................................................19200.0511000
...............................................................................................................................................................................................GGAAACTTGTGCCACTAAGCTGC......................................23200.0511000
.................................................................................................................................................................................................AAACTTGTGCCACTAAGCTGCAGAGC.................................26200.0511000
..............................................................................................................................................................................................................TAAGCTGCAGAGCGCCACCCC.........................21200.0511000
.......................................................................................................................................................................................................GTGCCACTAAGCTGCAGAGCGCC..............................23200.0511000
........................................................................................................................................................................................................TGCCACTAAGCTGCAGAGCGCC..............................22200.0510100
........................................................................................................................................................................................CCACCTTGGAAACTTGTG..................................................18200.0510010
........................................................................................................................................................................................CCACCTTGGAAACTTGTGA.................................................19200.0511000
.......................................................................................................................................................................................................GTGCCACTAAGCTGCAGAGCGCT..............................23200.0511000
droYak3
C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGAACTGCCCCCGTGGCAAATAGTGCCACAGAGCCGCAGGGCCCCCCCTATTCATATAGAAAATGTTAGGGAAATSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..................................................................................................................................................................................................................................ATTCATATAGAAAATGTTAGGGAAA.25200.40800000010007
...............................................................................................................................................................................................................................CCTATTCATATAGAAAATGTTAGGGA...26200.20400000000004
..................................................................................................................................................................................................................................ATTCATATAGAAAATGTTAGGGA...23200.10201000010000
.................................................................................................................................................................................................................................TATTCATATAGAAAATGTTAGGGAAA.26200.10201100000000
.................................................................................................................................................................................................................................TATTCATATAGAAAATGTTAGGGA...24200.05101000000000
.................................................................................................................................................................................................................................TATTCATATAGAAAATGTTAGGG....23200.05101000000000
..................................................................................................................................................................................................................................ATTCATATAGAAAATGTTAGG.....21200.05101000000000
..............................................................................................................................................................................................TGGCAAATAGTGCCACAGAGCCGC......................................24200.05100000010000
..................................................................................................................................................................................................................................ATTCATATAGAAAATGTTAGGGAA..24200.05101000000000
.......................................................................................................................................................................................................................................TATAGAAAATGTTAGGGAAAT21200.05100000010000
droEre2
CAGC------------------------------------------------------------------------------------------------------------------------------------------------------TAAAATGAACGTAAACCAAATCCCAATTTACTGCCTTGGCAGACAGTCCCAGTAAGCAGGAAACCTCCATCAATCTCTTTGACCAATATCTAGCAGATSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 06/08/2015 at 03:23 PM