ID:

dpe_864

 Coordinate:

scaffold_160:69834-69984 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-16.1 -16.01 -16.01

Flybase annnotation

exon [dper_GLEANR_15598:2]; CDS [Dper\GL14789-cds]; intron [Dper\GL14789-in]

Repeatable elements

NameClassFamilyStrand
Nobel_LTRLTRPao+
mature
  1. scaffold_238:19218-19242 -
  2. scaffold_160:63337-63361 +
  3. dpe_864  scaffold_160:69869-69893 +
  4. scaffold_156:40899-40923 -
  5. scaffold_134:12086-12110 -
  6. scaffold_125:96530-96554 +
  7. scaffold_326:4496-4520 +
  8. scaffold_2596:1997-2021 -
  9. scaffold_2838:674-698 +
  10. scaffold_3721:4900-4924 -
  11. scaffold_3209:558-582 +
  12. scaffold_984:13-37 -
  13. scaffold_1253:4910-4934 +
  14. scaffold_1432:4244-4268 -
  15. scaffold_648:4144-4168 +
  16. scaffold_9608:231-255 -
star

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AATTCGCCCCGCTTTGCCACCGTAGGTAAGGTAGGCACAGAAGAAATTGTTTTAATATATGAAGGAAGTCCAGAAAAATCCATGAAATCGAACGCACGCACTCCTTTTTTTCGTCTTATTAAAATACAAAATTGCAGTCACCCAAGTTGTTGCGGTATCGTAATTTAGAAAAACTCTTCTAAAATTTCAGTAGCTCTTCAGGCCCTGGTGGTCAACAATTTTAAGAAAATGCACACCAGGACAATTGCGAC
**************************************************.........(((((..(((...((((.....((((((.....................))))))...............((((((.((.((((((....))).))))).))))))(((((......)))))...))))....)))))))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 M021
embryo
.....................................................................................AATCGAACGCACGCACTCCTTTTTT............................................................................................................................................. 25 0 16 0.13 2 2 0
.....................................................................................AATCGAACGCACGCACTCCTTTTT.............................................................................................................................................. 24 0 16 0.13 2 2 0
.....................................................................................AATCGAACGCACGCACTCCTTTTTTT............................................................................................................................................ 26 0 13 0.08 1 1 0
.................................................................................ATGAAATCGAACGCACGCACTCCTT................................................................................................................................................. 25 0 14 0.07 1 1 0
.....................................................................................AATCGAACGCACGCACTCCTTTT............................................................................................................................................... 23 0 17 0.06 1 1 0
..................................................................................TGAAATCGAACGCACGCACTC.................................................................................................................................................... 21 0 18 0.06 1 0 1
......................................................................................ATCGAACGCACGCACTCC................................................................................................................................................... 18 0 20 0.05 1 1 0
....................CGTAGGTAAGGTAGGCACAGAAGA............................................................................................................................................................................................................... 24 0 20 0.05 1 1 0
........................................................................GAAAAATCCATGAAATCGAAC.............................................................................................................................................................. 21 0 20 0.05 1 1 0

Anti-sense strand reads

TTAAGCGGGGCGAAACGGTGGCATCCATTCCATCCGTGTCTTCTTTAACAAAATTATATACTTCCTTCAGGTCTTTTTAGGTACTTTAGCTTGCGTGCGTGAGGAAAAAAAGCAGAATAATTTTATGTTTTAACGTCAGTGGGTTCAACAACGCCATAGCATTAAATCTTTTTGAGAAGATTTTAAAGTCATCGAGAAGTCCGGGACCACCAGTTGTTAAAATTCTTTTACGTGTGGTCCTGTTAACGCTG
**************************************************.........(((((..(((...((((.....((((((.....................))))))...............((((((.((.((((((....))).))))).))))))(((((......)))))...))))....)))))))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 M021
embryo
 V042
embryo
.....................CATCCATTCCATCCGTGTCTTCTTT............................................................................................................................................................................................................. 25 0 20 1.05 21 20 1 0
....................GCATCCATTCCATCCGTGTCTTCTTT............................................................................................................................................................................................................. 26 0 20 0.55 11 9 2 0
...................GGCATCCATTCCATCCGTGTCTTCTT.............................................................................................................................................................................................................. 26 0 20 0.45 9 9 0 0
........................................................................CTTTTTAGGTACTTTAGCTTGCGTG.......................................................................................................................................................... 25 0 20 0.30 6 6 0 0
.......................TCCATTCCATCCGTGTCTTCTTT............................................................................................................................................................................................................. 23 0 20 0.25 5 5 0 0
...................GGCATCCATTCCATCCGAGTCTTCTTT............................................................................................................................................................................................................. 27 1 20 0.15 3 3 0 0
.....CGGGGCGAAACGGTGGCATCCAT............................................................................................................................................................................................................................... 23 0 20 0.15 3 3 0 0
........................CCATTCCATCCGTGTCTTCTTT............................................................................................................................................................................................................. 22 0 20 0.10 2 2 0 0
.....................CATCCATTCCATCCGTGTCTTCTT.............................................................................................................................................................................................................. 24 0 20 0.10 2 2 0 0
...................GGCATCCATTCCATCCGGGTCTTCTT.............................................................................................................................................................................................................. 26 1 20 0.10 2 2 0 0
.....................................................................................TTAGCTTGCGTGCGTGAGGAAAAAAA............................................................................................................................................ 26 0 13 0.08 1 1 0 0
...............................................................................GGTACTTTAGCTTGCGTGCGTGAGG................................................................................................................................................... 25 0 14 0.07 1 1 0 0
..............................................................................AGGTACTTTAGCTTGCGTGCGTGA..................................................................................................................................................... 24 0 14 0.07 1 1 0 0
..................................................................................ACTTTAGCTTGCGTGCGTGAGGAA................................................................................................................................................. 24 0 15 0.07 1 1 0 0
...................................GTGTCTTCTTTAACAAAATT.................................................................................................................................................................................................... 20 0 20 0.05 1 1 0 0
..........................................................................TTTTAGGTACTTTAGCTTGCGTGCGT....................................................................................................................................................... 26 0 20 0.05 1 1 0 0
............................TCCATCCGTGTCTTCTTT............................................................................................................................................................................................................. 18 0 20 0.05 1 1 0 0
........................CCATTCCATCCGTGTCTTCTTTAAC.......................................................................................................................................................................................................... 25 0 20 0.05 1 1 0 0
...................GGCCTCCATTCCATCCGTGTCTTCTTT............................................................................................................................................................................................................. 27 1 20 0.05 1 0 1 0
.....CGGGGCGAAACGGTGGCATCCATTC............................................................................................................................................................................................................................. 25 0 20 0.05 1 1 0 0
...................GGCATCCATTCCATCGGTGTCTTCTTTAC........................................................................................................................................................................................................... 29 2 20 0.05 1 1 0 0
...................GGCATCCATTCCATCCGTGTCTT................................................................................................................................................................................................................. 23 0 20 0.05 1 1 0 0
.................ATGGCATCCATTCCATCCGTGTCTTCTTT............................................................................................................................................................................................................. 29 1 20 0.05 1 1 0 0
............................TCCATCCGTGTCTTCTTTAACAAAA...................................................................................................................................................................................................... 25 0 20 0.05 1 1 0 0
...................GGCATCCATTCCATCCGTGTCTTCTTTG............................................................................................................................................................................................................ 28 1 20 0.05 1 1 0 0
.........................CATTCCATCCGTGTCTTCTTC............................................................................................................................................................................................................. 21 1 20 0.05 1 1 0 0
...................GGCATCCATTCCATCCGCGTCTTCTT.............................................................................................................................................................................................................. 26 1 20 0.05 1 1 0 0
.......................................................................TCTTTTTAGGTACTTTAGCTTGCGT........................................................................................................................................................... 25 0 20 0.05 1 0 1 0
.................GTGGCATCCATTCCATCCGTGTCTTCT............................................................................................................................................................................................................... 27 0 20 0.05 1 1 0 0
.........................CATTCCATCCGTGTCTTCTT.............................................................................................................................................................................................................. 20 0 20 0.05 1 1 0 0
...................GGCATCCATTCCATCCGTGTCTTCTTTT............................................................................................................................................................................................................ 28 1 20 0.05 1 1 0 0
...................GGCATCCATTCCATCCGAGTCTTCTT.............................................................................................................................................................................................................. 26 1 20 0.05 1 1 0 0
.TAAGCGGGGCGAAACGGTGGCATCCAT............................................................................................................................................................................................................................... 27 0 20 0.05 1 1 0 0
...........................................................................TTTAGGTACTTTAGCTTGCGTGCGT....................................................................................................................................................... 25 0 20 0.05 1 0 0 1
.......................TCCATTCCATCCGTGTCTTCTT.............................................................................................................................................................................................................. 22 0 20 0.05 1 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_160:69784-70034 + dpe_864 AATTCGCCCCGCT--TTGCCA-CCGTAG-GTAAGGTAGGCACAG-AAG--A-AATTGTT------TT-AATAT----ATGAA---GGAAGT-CC----AG---AAAAATCC--ATGAAATCGAACGCACGCACTCCTTTT-----------TTTCGT------CTT-AT----------TAAA----AT-ACAA------AA----TTGCAGTCACC-------CAAGTTGTTGCGGT-----A---T--CGTAA--------------------TT--------TAGAAAAACTCTTCTAAA---ATTTCA-G----TAGCTCTTCAGGCCCTGGTGGTCAA------CAATT-----TT---AAGAAAATGCACACCAGGACAATTGCGAC
dp5 Unknown_group_130:7418-7635 + AATTCGCCCCGCT--TTGCCA-CCGTAG-GTAAGGTAGGCACAG-AAG--A-AATTGTT------TT-AATAT----ATGAA---GGAATT-CG----AG---AAAAATCC--AT-GAAACGAACGCACGCA----CTCC------TTTTTT------TTCGTCGT-AT----------TAAA----AT-ACAA------AA----TTGCAGTCACC-------CAAGTTGTTTCGGT-----A---T--CTTTA--------------------TT--------TAGAAAAACTATTTTAAA---ATTTCAT--CGGTAATGGTTGAGTACCT-GTCGACC-------------------------------------------------AA
droWil2 scf2_1100000004958:375620-375733 + AATTCGCCT-GCT--CCGCCT-CGTTAG-G---------AA-AAAGAA--CA--ATAT------GAAGAAT------A---------TAG--------TCGAAAGTTATAT--ATGAAAGCGAA----CGCA----TCGT--------------TGT-TTTATTTATCGCAAAA-------------TT-----------------------TCACT-------TGAGTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12958:3078785-3078928 + GATTTGCCTTGCC--TCGCCG-CGTTAGCTTAATGTAGGCT-TAAGTT--TA-GTTGTC------GA-ATTAT----ATTAA---TGCGATTCGCACTAA---GCATGTCT--TTTAAG--------------------------------------------------------------------------------------------GCCACC-------ACAC-G-CTTAAAT-----G------TTTTT--------------------TA------T-CATATAAACTAATATAAT---TTTTCA---------------------------------------------------------------------------------
droAna3 scaffold_13274:207817-208071 + AATTCGCCCCGCT--TCACCG-CACTAG-ATAAGCTAGGCT-TAAGTT--T---TTGTTGATATGAA-TAT------A---------TAA--------TCGAATT--TATAACGTCGAAAAGAGTGCACGCA----TTT-------------TTCGTTTTCGTTCTTTGCAA---------------TTTAAT--TTAA---TTTTCTACAGCCACC-------TTTGTT---TCCTTTCGTTT---T--CGCGA---------------------C--------GAGATAAACTAATCTCAATAAACATTTTGGCGCCCCCGG-----------GTGGACTGTAG------TGAATAATTAAATAAAA-AAGCA--CCAAA-AAATTGTGAC
droBip1 scf7180000391408:11053-11296 - AATTCGCCCCGCT--TCGCCG-CAATAG-ATAAGTTAGGCT-TAAGAT--TA-G-AGA------G-A-AAT------A---------CAA--------TCGAATT--TATAACGTTGA-TTAGGCACGACCA----TTTC-----------TTTCGTTTTCGTTTTTCTCAA---------------ATTTTTA---AA---TATTTTGCAGCCACT-------CTTTTTT--TTATTAT---T---T--TGAAGT-------------------GT--------GAGATAAATCAATCTCGTTATACATTTTGGCGCCCCCGG-----------GTGGACAATAGTGAAAATA-----TT---TAAAAAATAAACAAAGTGA-------CAA
droKik1 scf7180000300896:5359-5594 + TATTCGCCCCGTCT-TCGCCC-CCTTCG-TAAAGCTCGGCTCTAAGCATGA-AACTGTT------TGAAGTTGAATTA---------TAA--------TCGAAAA--TTTAA-GTCAAATCGAACACACGCA----TCTA------TT---TTTCGTTCTCGTTGTTCGC----------CTAACAAAT-AAAA-A---TTAT---TTCTTGCCACC--------AAGTT--CTCGGT-----T---T--TATTA--------------------TT------TCT-AAAAAACTTATTAGAA---AATCCATGGCGCCCCCGG-----------GTGGACAA------GAATAATTAATA-------A----------------------AA
droFic1 scf7180000450016:396-615 + AGTTCGCTCCGTCT-TCGCCAACCTTCG-GTAAGCTAGGCT-TAAGAA--TA-A-TGT------GCAGAATAG--------AT----CATT-CG----TTGA---AATTGAG-TTTG-ATCGAGCGCACGCA----TTTC------TT---TTTCGT-TTCGTTGTTTGC----------CGA----AT-AAA--TTAA---------TTAGCCACC-------CCATT--TTTCGGT-----T----ATTAATA--------------------TT--------TAGAAAAACTATTCTAAA---TTTTCATGGCGCCCCCGG-----------GTGGACTAAAT------TA-----------ATAA---------------------AAT
droEle1 scf7180000489884:3487-3725 + AATTCGCCCCGTCTCTCGCCA-CCGTAGCATAAGTTAGGTTCTAAGAG--A-AATTATT------GA-AATAT----A--AT--TGTTAG--------TGATCAA--TCGAA--CGTCATCGTAG----CCACTCCTTTTCGTCGCG---CTTTCGA-CATAGTTTTCACAATATTTCGCAA-----AT-TAAA-A---TCGT---CTCGAACTACTGCGTTCACAAGTTTTCGCG-T-----T----ATTAA--------------------------------T-ACAAAACAGTATTAAA---TTTTCA-GACACTACTAG---------------TCAA------ATTTC-----TT-------A----------------------AG
droRho1 scf7180000776714:324-559 - AAGTCGCCCCGTCT-TCGCCAACCTTCG-TTAAGCTAGGCTCTAAGTA--CT--TTGTC------GA-AAAAT----ATAGA---AGTATT-CG----TTGA---AATTGA--TTTGAGCCGTCGACAC-CT----TTTT-----------TTTCGTTTTCGTTTCTCGCAA---------------AT-AAT-------AA----TTTTAGCCACC--GTC--CAAGTTTTTTCGGA-----A----ATTAATA--------------------AT--------TAGAT-AACTC-TCTAAT---TTTTTTTGTTGCCCGCGG-CGTGTTGGT-GTGGACAG------------------------AAAATACACAG------------CAG
droBia1 scf7180000301600:23847-24023 - AACTCGCCCCGTCT-ATGTCAACTTTCG-TTAAGCTAGGATCTAAGAA--TT-TTTGCC------TG-AATAT----ATAAA---G-CATT-CG----TTGA---AACCGA--TTTAAATCGACTAGTCAAA----TT--------------------TTTGTTTTCTG----------CAAA----AT-AAAA------AT----TTATTCCCACC-------AAAGTTTTTTCGGA-----T----G---------------------------T--------TAGAAAAACTGTTCCAAT---TTTT-----------------------------------------------------------------------------------
droTak1 scf7180000411320:22608-22858 + AATTCGCCCCGTCT-TCGTCAACTGTCG-TTAAGCTAGGCTCTTAGAA--CT--TTGT------GAA-AATAT----A--GTCG-TTTAAT-CG----TTGA---AATTGA--TTTATATCGATCACACGCA----TTTT-----------TCTCGTCTTCGCTTT-CGCAGTTG----CCCA----AT-AAAT------AA----TTATAACCACC-------A--GTTTTTTCGTTTCGTTGTCAT--TGTAATTTCAAATGTGTCGTCTTCTTTTGTATCTCTAAAACAGGGGTGCTCAG---TCCTAT-GG----------------------------------------------------------CACACGAGCACAA----TTG
droEug1 scf7180000407702:13404-13412 + AATTCGGCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dm3 chr3RHet:1822652-1822739 + AATTCGCCCCGCC--TCGCCTATG------------------------------------------------------------------------------------------------------------------------------------------------------------AAA----GT-GTGA------AA----TAGAAGTTACA-------CTA------------------------------------------------------------------------------------------------------------GTGGGCAT------AAGTA-----TT---TAGAGAATGTTCAACA---AACTCCCCGA
droSim2 node_28841:103-209 + AATTCGCCCCGTCT-TCGCCAACCTCTG-TTAAGCTAGGCC-TAAGAA--CACA-TAT------GTTAAATAG------AGA---TGAAG--------TCGAAAA--TTAAA-TTCAATACGAGCACACGCA----TTTT------T-----TT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_41:154464-154501 - AATTCGCGCCGCCT-TCGCAAGCCTTTG-TTAAGCTAGGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 chr2h:380277-380519 - AATTCGCCCCGCCT-TCGCCAACCTCTG-TTAAGCTAGGCC-TAGGAA--CATATAGGT------AA-AATAG--------AAGATTAAG--------TAGAAAA--TTGAA-TTCACACCGAACACACTCA----CTTC------T----TTTCGTTCTCGTCGT-TGC---------GAAA----AT-ACAAATTAATTA----TTCTTGCCACC-------AAAGTTCGTTCGGT-----T---A--GGTTT--------------------TT--------T-AATAAACTTATTAAAA---ACATCATGGCGCCCCCGG-----------GTGGACAAA-------ATAATTAATTTA-AACAAAAGGCA------------------
droEre2 scaffold_4929:25994520-25994700 - AATTAGCGCCGCCT-TCGCCAACTTTCG-TTAAACTAGGCTCTAAGTA--CG--ATGT------GAA-AATAT----A----------AG--------TTGAAAA--TTGAA-ATCGTCCAGCGTACACGCA----TTAT------T----TTTCGA------CGCCGA----------CATA----AT-ACA--TTTATTG----TTCTTGCCACC--------AAGTT--CTCGGT-----A---T--TC--T--------------------TT--------T-AATAAACTAAATAAAA---ATTTCA-G------------------------------------------------------------------------------T

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
AATTCGCCCCGCT--TTGCCA-CCGTAG-GTAAGGTAGGCACAG-AAG--A-AATTGTT------TT-AATAT----ATGAA---GGAAGT-CC----AG---AAAAATCC--ATGAAATCGAACGCACGCACTCCTTTT-----------TTTCGT------CTT-AT----------TAAA----AT-ACAA------AA----TTGCAGTCACC-------CAAGTTGTTGCGGT-----A---T--CGTAA--------------------TT--------TAGAAAAACTCTTCTAAA---ATTTCA-G----TAGCTCTTCAGGCCCTGGTGGTCAA------CAATT-----TT---AAGAAAATGCACACCAGGACAATTGCGACSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.....................................................................................................................AATCGAACGCACGCACTCCTTTT-----------TT................................................................................................................................................................................................................................................25160.132020000
.....................................................................................................................AATCGAACGCACGCACTCCTTTT-----------T.................................................................................................................................................................................................................................................24160.132020000
.....................................................................................................................AATCGAACGCACGCACTCCTTTT-----------TTT...............................................................................................................................................................................................................................................26130.081010000
.................................................................................................................ATGAAATCGAACGCACGCACTCCTT...............................................................................................................................................................................................................................................................25140.071010000
.....................................................................................................................AATCGAACGCACGCACTCCTTTT-----------..................................................................................................................................................................................................................................................23170.061010000
..................................................................................................................TGAAATCGAACGCACGCACTC..................................................................................................................................................................................................................................................................21180.061100000
......................................................................................................................ATCGAACGCACGCACTCC.................................................................................................................................................................................................................................................................18200.051010000
.......................CGTAG-GTAAGGTAGGCACAG-AAG--A-.....................................................................................................................................................................................................................................................................................................................................................24200.051010000
...................................................................................................G---AAAAATCC--ATGAAATCGAAC............................................................................................................................................................................................................................................................................21200.051010000
dp5
AATTCGCCCCGCT--TTGCCA-CCGTAG-GTAAGGTAGGCACAG-AAG--A-AATTGTT------TT-AATAT----ATGAA---GGAATT-CG----AG---AAAAATCC--AT-GAAACGAACGCACGCA----CTCC------TTTTTT------TTCGTCGT-AT----------TAAA----AT-ACAA------AA----TTGCAGTCACC-------CAAGTTGTTTCGGT-----A---T--CTTTA--------------------TT--------TAGAAAAACTATTTTAAA---ATTTCAT--CGGTAATGGTTGAGTACCT-GTCGACC-------------------------------------------------AASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
......................CCGTAG-GTAAGGTAGGCACAG-AAG--.......................................................................................................................................................................................................................................................................................................................................................2473.862705000011920
......................CCGTAG-GTAAGGTAGGCACAG-A...........................................................................................................................................................................................................................................................................................................................................................2272.571801400020200
......................CCGTAG-GTAAGGTAGGCACAG-AAG--A-.....................................................................................................................................................................................................................................................................................................................................................2572.571805000001120
...................CA-CCGTAG-GTAAGGTAGGCACAG-AAG--.......................................................................................................................................................................................................................................................................................................................................................2671.571100000001010
......................CCGTAG-GTAAGGTAGGCACAG-AA..........................................................................................................................................................................................................................................................................................................................................................2371.431001000000000
....................A-CCGTAG-GTAAGGTAGGCACAG-AAG--.......................................................................................................................................................................................................................................................................................................................................................2571.2990000000900
......................CCGTAG-GTAAGGTAGGCACAG-............................................................................................................................................................................................................................................................................................................................................................2171.0070700000000
..................................................................T-AATAT----ATGAA---GGAATT-CG----AG---A.................................................................................................................................................................................................................................................................................................2221.0020000000020
...........................................................................................................................................................................................................................................................................................................TAAA---ATTTCAT--CGGTAATGGTTGAG................................................................2511.0010000000100
...........................................................................................................................................................................................................................................................................................................TAAA---ATTTCAT--CGGTAATGGTTGA.................................................................2411.0010100000000
......................CCGTAG-GTAAGGTAGGCACAG-AAG--A-AA...................................................................................................................................................................................................................................................................................................................................................2770.8660400000200
.......................................................................................................................................................T------TTCGTCGT-AT----------TAAA----AT-ACAA------AA----TTGCAG.....................................................................................................................................................................................2960.6740000000040
....................A-CCGTAG-GTAAGGTAGGCACAG-AAG--A-.....................................................................................................................................................................................................................................................................................................................................................2670.5740000000400
.....................................................................ATAT----ATGAA---GGAATT-CG----AG---AAA...............................................................................................................................................................................................................................................................................................2220.5010100000000
..................................................................T-AATAT----ATGAA---GGAATT-CG----AG---AAAAAAA...........................................................................................................................................................................................................................................................................................2820.5010000000100
......................................................................................GAATT-CG----AG---AAAAATCC--AT-GAAACGA..............................................................................................................................................................................................................................................................................2620.5010100000000
....................A-CCGTAG-GTAAGGTAGGCACAG-AAG--A-AA...................................................................................................................................................................................................................................................................................................................................................2870.4330000000300
......................CCGTAG-GTAAGGTAGGCACAG-AAA--.......................................................................................................................................................................................................................................................................................................................................................2470.4330200000100
.......................CGTAG-GTAAGGTAGGCACAG-A...........................................................................................................................................................................................................................................................................................................................................................2170.4330200000010
......................CCGTAG-GTAAGGTAGGCAC...............................................................................................................................................................................................................................................................................................................................................................1970.4330300000000
................................................................................................................................................................CGTCGT-AT----------TAAA----AT-ACAA------AA----TTGC.......................................................................................................................................................................................2460.3320200000000
..............................................................................................................................................................................................................TTGCAGTCACC-------CAAGTTGTTTCGGT-----A---..................................................................................................................................................2690.3330300000000
................................................................................................................................................................................................................GCAGTCACC-------CAAGTTGTTTCGG............................................................................................................................................................2290.3330200100000
................................................................................................................................................................CGTCGT-AT----------TAAA----AT-ACAA------AA----TTGCA......................................................................................................................................................................................2560.3320200000000
...............................................................................................................................................................................................................TGCAGTCACC-------CAAGTTGTTTCGGT-----A---..................................................................................................................................................2590.3330300000000
....................A-CCGTAG-GTAAGGTAGGCACAG-AA..........................................................................................................................................................................................................................................................................................................................................................2470.2920010000100
..............................................................................................................................................................TTCGTCGT-AT----------TAAA----AT-ACAA------AA----T..........................................................................................................................................................................................2370.2920000000020
.................................................................................................................................................................................................................CAGTCACC-------CAAGTTGTTTCGGT-----A---..................................................................................................................................................2390.2220200000000
...............................................................................................................................................................................................................TGCAGTCACC-------CAAGTTGTTTCGG............................................................................................................................................................2390.2220200000000
....................................................................................................................................................................................................................................TTGTTTCGGT-----A---T--CTTTA--------------------TT--------TAGAAA......................................................................................................2550.2010100000000
......................................................................................................................................................................................................................................GTTTCGGT-----A---T--CTTTA--------------------TT--------TAGAAAAAC...................................................................................................2650.2010000000010
........................................................................................................................................................................................................................................TTCGGT-----A---T--CTTTA--------------------TT--------TAGAAAAACT..................................................................................................2550.2010000000010
......................................................................................................................................................................................................................................GTTTCGGT-----A---T--CTTTA--------------------TT--------TAGAAA......................................................................................................2350.2010100000000
.....................................................................................................................................................................................................................................TGTTTCGGT-----A---T--CTTTA--------------------TT--------TAGAAAAAC...................................................................................................2750.2010100000000
..........................AG-GTAAGGTAGGCACAG-AAG--A-AATT.................................................................................................................................................................................................................................................................................................................................................2560.1710000000100
...................................TAGGCACAG-AAG--A-AATTGTT------TT-A....................................................................................................................................................................................................................................................................................................................................2360.1710000001000
......................CCGTAG-GTAAGGTAGGCA................................................................................................................................................................................................................................................................................................................................................................18120.1720200000000
....................................................................................................................................................................................................................TCACC-------CAAGTTGTTTCGGT-----A---T--CTTA...........................................................................................................................................2560.1710100000000
..............................................................................................................................................................TTCGTCGT-AT----------TAAA----AT-ACAA------AA----TTGC.......................................................................................................................................................................................2660.1710000001000
.................................................................................................................................................................................................................CAGTCACC-------CAAGTTGTTTCGGT-----A---T--CTT............................................................................................................................................2760.1710100000000
................................................................................................................................................................CGTCGT-AT----------TAAA----AT-ACAA------AA----TTGCAGT....................................................................................................................................................................................2760.1710100000000
...............................................................................................................................................................TCGTCGT-AT----------TAAA----AT-ACAA------AA----TTGC.......................................................................................................................................................................................2560.1710100000000
.........................TAG-GTAAGGTAGGCACAG-A...........................................................................................................................................................................................................................................................................................................................................................1970.1410100000000
.......................CGTAG-GTAAGGTAGGCAC...............................................................................................................................................................................................................................................................................................................................................................1870.1410100000000
...................CA-CCGTAG-GTAAGGTAGGCACAG-AA..........................................................................................................................................................................................................................................................................................................................................................2570.1410000000100
....................A-CCGTAG-GTAAGGTAGGCACAG-A...........................................................................................................................................................................................................................................................................................................................................................2370.1410000000100
.............................GTAAGGTAGGCACAG-AAG--A-.....................................................................................................................................................................................................................................................................................................................................................1970.1410000000010
.............................GTAAGGTAGGCACAG-AAG--A-A....................................................................................................................................................................................................................................................................................................................................................2070.1410001000000
........................GTAG-GTAAGGTAGGCACAG-AA..........................................................................................................................................................................................................................................................................................................................................................2170.1410100000000
................................................................................................................................................................CGTCGT-AT----------TAAA----AT-ACAA------AA----TTG........................................................................................................................................................................................2370.1410100000000
..........................AG-GTAAGGTAGGCACAG-AAG--A-AA...................................................................................................................................................................................................................................................................................................................................................2370.1410000000010
........................GTAG-GTAAGGTAGGCACAG-A...........................................................................................................................................................................................................................................................................................................................................................2070.1410100000000
.......................CGTAG-GTAAGGTAGGCACAG-AAA--.......................................................................................................................................................................................................................................................................................................................................................2370.1410100000000
.......................CGTAG-GTAAGGTAGGCACAG-............................................................................................................................................................................................................................................................................................................................................................2070.1410100000000
....................A-CCGTAG-GTAAGGTAGGCACA..............................................................................................................................................................................................................................................................................................................................................................2170.1410100000000
...................CA-CCGTAG-GTAAGGTAGGCACA..............................................................................................................................................................................................................................................................................................................................................................2270.1410100000000
...............................AAGGTAGGCACAG-AAG--A-AATTG................................................................................................................................................................................................................................................................................................................................................2270.1410100000000
..............................TAAGGTAGGCACAG-AAG--A-AATTG................................................................................................................................................................................................................................................................................................................................................2370.1410000000010
.......................................................................................................................................................T------TTCGTCGT-AT----------TAAA----AT-ACAA------AA----T..........................................................................................................................................................................................2470.1410100000000
...........................G-GTAAGGTAGGCACAG-AAG--A-A....................................................................................................................................................................................................................................................................................................................................................2170.1410000000010
.........................TAG-GTAAGGTAGGCACAG-AA..........................................................................................................................................................................................................................................................................................................................................................2070.1410100000000
......................CCGTAG-GTAAGGTAGGCACAA-............................................................................................................................................................................................................................................................................................................................................................2170.1410100000000
...............................AAGGTAGGCACAG-AAG--A-AATTGTT------T.......................................................................................................................................................................................................................................................................................................................................2570.1410100000000
......................CCGTAG-GTAAGGTAGGCACAG-AAG--A-A....................................................................................................................................................................................................................................................................................................................................................2670.1410100000000
..........................AG-GTAAGGTAGGCACAG-AAG--A-A....................................................................................................................................................................................................................................................................................................................................................2270.1410000000010
..............................TAAGGTAGGCACAG-AAG--A-AA...................................................................................................................................................................................................................................................................................................................................................2080.1310000000010
........................................................................................................................................................................................................AA----TTGCAGTCACC-------CAAGTTGTTTCGG............................................................................................................................................................2680.1310100000000
..............................TAAGGTAGGCACAG-AAG--A-AATA.................................................................................................................................................................................................................................................................................................................................................2280.1310000000010
..................................................................................................................T-GAAACGAACGCACGCA----CTCC------TTTTTT------...........................................................................................................................................................................................................................................2780.1310100000000
.........................................................................................................................................................................................................A----TTGCAGTCACC-------CAAGTTGTTTCGGT-----......................................................................................................................................................2680.1310100000000
...............................................................................................................................................................................................................TGCAGTCACC-------CAAGTTGTTTCGGT-----A---A--...............................................................................................................................................2690.1110100000000
...............................................................................................................................................................................................................TGCAGTCACC-------CAAGTTGTTTCG.............................................................................................................................................................2290.1110100000000
..............................................................................................................................................................................................................TTGCAGTCACC-------CAAGTTGTTTCG.............................................................................................................................................................2390.1110100000000
..................................................................................................................T-GAAACGAACGCACGCA----CTCC------T......................................................................................................................................................................................................................................................2290.1110100000000
..............................................................................................................................................................................................................TTGCAGTCACC-------CAAGTTGTTTCGG............................................................................................................................................................2490.1110100000000
..............................................................................................................................................................................................................TTGCAGTCACC-------CAAGTTGTT................................................................................................................................................................2090.1110100000000
..............................................................................................................................................................................................................TTGCAGTCACC-------CAAGTTGTTTCGGT-----......................................................................................................................................................2590.1110100000000
.......................................................................................................................................................................AT----------TAAA----AT-ACAA------AA----TTGCAG.....................................................................................................................................................................................2090.1110100000000
........CCGCT--TTGCCA-CCGTAG-GTA.........................................................................................................................................................................................................................................................................................................................................................................20200.1020000101000
......................CCGTAG-GTAAGGTAGGCAA...............................................................................................................................................................................................................................................................................................................................................................19140.0710100000000
...................................................................................................................................................................................TAAA----AT-ACAA------AA----TTGCAGTCACA-------.........................................................................................................................................................................23140.0710100000000
............................................................................................................................................................................................T-ACAA------AA----TTGCAGTCACC-------CAAGTT...................................................................................................................................................................24150.0710000001000
......................................................................................................................AACGAACGCACGCA----CTCC------TTTTTT------...........................................................................................................................................................................................................................................24170.0610100000000
....................................................................................................................................................................................AAA----AT-ACAA------AA----TTGCAGTCA..................................................................................................................................................................................20170.0610100000000
......................................................................................................................AACGAACGCACGCA----CTCC------TTTTTT------T..........................................................................................................................................................................................................................................25170.0610010000000
......................................................................................................................AACGAACGCACGCA----CTCC------TTTTT..................................................................................................................................................................................................................................................23170.0610100000000
......................................................................................................................................................................................A----AT-ACAA------AA----TTGCAGTCACC-------CA.......................................................................................................................................................................22180.0610100000000
...................CA-CCGTAG-GTAAGGTAGG..................................................................................................................................................................................................................................................................................................................................................................18200.0510100000000
....CGCCCCGCT--TTGCCA-CCGTAG-G...........................................................................................................................................................................................................................................................................................................................................................................22200.0510000100000
.........CGCT--TTGCCA-CCGTAG-GTA.........................................................................................................................................................................................................................................................................................................................................................................19200.0510100000000
...TCGCCCCGCT--TTGCCA-CCGTAG-G...........................................................................................................................................................................................................................................................................................................................................................................23200.0510100000000
droWil2
AATTCGCCT-GCT--CCGCCT-CGTTAG-G---------AA-AAAGAA--CA--ATAT------GAAGAAT------A---------TAG--------TCGAAAGTTATAT--ATGAAAGCGAA----CGCA----TCGT--------------TGT-TTTATTTATCGCAAAA-------------TT-----------------------TCACT-------TGAGTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
GATTTGCCTTGCC--TCGCCG-CGTTAGCTTAATGTAGGCT-TAAGTT--TA-GTTGTC------GA-ATTAT----ATTAA---TGCGATTCGCACTAA---GCATGTCT--TTTAAG--------------------------------------------------------------------------------------------GCCACC-------ACAC-G-CTTAAAT-----G------TTTTT--------------------TA------T-CATATAAACTAATATAAT---TTTTCA---------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droAna3
AATTCGCCCCGCT--TCACCG-CACTAG-ATAAGCTAGGCT-TAAGTT--T---TTGTTGATATGAA-TAT------A---------TAA--------TCGAATT--TATAACGTCGAAAAGAGTGCACGCA----TTT-------------TTCGTTTTCGTTCTTTGCAA---------------TTTAAT--TTAA---TTTTCTACAGCCACC-------TTTGTT---TCCTTTCGTTT---T--CGCGA---------------------C--------GAGATAAACTAATCTCAATAAACATTTTGGCGCCCCCGG-----------GTGGACTGTAG------TGAATAATTAAATAAAA-AAGCA--CCAAA-AAATTGTGACSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...........................................................................................................................................................................................................TTTCTACAGCCACC-------TTTGTT---TCCT............................................................................................................................................................24120.425320000
...........................................................................................................................................................................................................TTTCTACAGCCACC-------TTTGTT---TCC.............................................................................................................................................................23120.334040000
.................................................................................................................................................................................................................CAGCCACC-------TTTGTT---TCCTTTCGT.......................................................................................................................................................23200.102110000
...........................................................................................................................................................................................................TTTCTACAGCCACC-------TTTGTT---TCCTTTCGC.......................................................................................................................................................29100.101010000
...........................................................................................................................................................................................................TTTCTACAGCCACC-------TTTGTT---TCCTTTC.........................................................................................................................................................27110.091100000
............................................................................................................ATAACGTCGAAAAGAGTGCACG.......................................................................................................................................................................................................................................................................22140.071100000
............................................................................................................................................................................................................TTCTACAGCCACC-------TTTGTT---TCCTTTC.........................................................................................................................................................26200.051010000
..............................................................................................................................................................................................................CTACAGCCACC-------TTTGTT---TCCTTTC.........................................................................................................................................................24200.051001000
............................................................................................................................................................................................................TTCTACAGCCACC-------TTTGTT---TCCTTTCG........................................................................................................................................................27200.051010000
...................................................................................................................................................................................................................GCCACC-------TTTGTT---TCCTTTCGTTT---T--CGC............................................................................................................................................27200.051100000
....................................................................................................................GAAAAGAGTGCACGCA----TTT-------------TTCGTTT..........................................................................................................................................................................................................................................26200.051100000
............................................................................................................................................................................................................TTCTACAGCCACC-------TTTGTT---T...............................................................................................................................................................20200.051010000
...............................................................................................................................................................................................................TACAGCCACC-------TTTGTT---TC..............................................................................................................................................................18200.051010000
..................................................................................................................................................................................................................AGCCACC-------TTTGTT---TCCTTTCGTT......................................................................................................................................................23200.051010000
.................................................................................................................................................................................................................................TTGTT---TCCTTTCGTTT---T--CGC............................................................................................................................................20200.051010000
...............................................................................................................................................................................................................TACAGCCACC-------TTTGTT---TCCTTTCGTT......................................................................................................................................................26200.051100000
......................................................................................................................AAAGAGTGCACGCA----TTT-------------TTCGTT...........................................................................................................................................................................................................................................23200.051100000
............................................................................................................................................................................................................TTCTACAGCCACC-------TTTGTT---TCCT............................................................................................................................................................23200.051010000
................................................................................................................................................................................................................................TTTGTT---TCCTTTCGTTT---T--CGC............................................................................................................................................21200.051010000
............................................................................................................................................................................................................TTCTACAGCCACC-------TTTGTT---TC..............................................................................................................................................................21200.051010000
....................................................................................................................................................................................................................CCACC-------TTTGTT---TCCTTTCGTTT---T--...............................................................................................................................................23200.051010000
..........................AG-ATAAGCTAGGCT-TAAGTT--T---TTGTTG.............................................................................................................................................................................................................................................................................................................................................27200.051100000
......................CACTAG-ATAAGCTAGGCT-TAAGT..........................................................................................................................................................................................................................................................................................................................................................23200.051001000
droBip1
AATTCGCCCCGCT--TCGCCG-CAATAG-ATAAGTTAGGCT-TAAGAT--TA-G-AGA------G-A-AAT------A---------CAA--------TCGAATT--TATAACGTTGA-TTAGGCACGACCA----TTTC-----------TTTCGTTTTCGTTTTTCTCAA---------------ATTTTTA---AA---TATTTTGCAGCCACT-------CTTTTTT--TTATTAT---T---T--TGAAGT-------------------GT--------GAGATAAATCAATCTCGTTATACATTTTGGCGCCCCCGG-----------GTGGACAATAGTGAAAATA-----TT---TAAAAAATAAACAAAGTGA-------CAASizeHit CountTotal NormTotal
No Reads
droKik1
TATTCGCCCCGTCT-TCGCCC-CCTTCG-TAAAGCTCGGCTCTAAGCATGA-AACTGTT------TGAAGTTGAATTA---------TAA--------TCGAAAA--TTTAA-GTCAAATCGAACACACGCA----TCTA------TT---TTTCGTTCTCGTTGTTCGC----------CTAACAAAT-AAAA-A---TTAT---TTCTTGCCACC--------AAGTT--CTCGGT-----T---T--TATTA--------------------TT------TCT-AAAAAACTTATTAGAA---AATCCATGGCGCCCCCGG-----------GTGGACAA------GAATAATTAATA-------A----------------------AASizeHit CountTotal NormTotal
No Reads
droFic1
AGTTCGCTCCGTCT-TCGCCAACCTTCG-GTAAGCTAGGCT-TAAGAA--TA-A-TGT------GCAGAATAG--------AT----CATT-CG----TTGA---AATTGAG-TTTG-ATCGAGCGCACGCA----TTTC------TT---TTTCGT-TTCGTTGTTTGC----------CGA----AT-AAA--TTAA---------TTAGCCACC-------CCATT--TTTCGGT-----T----ATTAATA--------------------TT--------TAGAAAAACTATTCTAAA---TTTTCATGGCGCCCCCGG-----------GTGGACTAAAT------TA-----------ATAA---------------------AATSizeHit CountTotal NormTotal
No Reads
droEle1
AATTCGCCCCGTCTCTCGCCA-CCGTAGCATAAGTTAGGTTCTAAGAG--A-AATTATT------GA-AATAT----A--AT--TGTTAG--------TGATCAA--TCGAA--CGTCATCGTAG----CCACTCCTTTTCGTCGCG---CTTTCGA-CATAGTTTTCACAATATTTCGCAA-----AT-TAAA-A---TCGT---CTCGAACTACTGCGTTCACAAGTTTTCGCG-T-----T----ATTAA--------------------------------T-ACAAAACAGTATTAAA---TTTTCA-GACACTACTAG---------------TCAA------ATTTC-----TT-------A----------------------AGSizeHit CountTotal NormTotal
No Reads
droRho1
AAGTCGCCCCGTCT-TCGCCAACCTTCG-TTAAGCTAGGCTCTAAGTA--CT--TTGTC------GA-AAAAT----ATAGA---AGTATT-CG----TTGA---AATTGA--TTTGAGCCGTCGACAC-CT----TTTT-----------TTTCGTTTTCGTTTCTCGCAA---------------AT-AAT-------AA----TTTTAGCCACC--GTC--CAAGTTTTTTCGGA-----A----ATTAATA--------------------AT--------TAGAT-AACTC-TCTAAT---TTTTTTTGTTGCCCGCGG-CGTGTTGGT-GTGGACAG------------------------AAAATACACAG------------CAGSizeHit CountTotal NormTotal
No Reads
droBia1
AACTCGCCCCGTCT-ATGTCAACTTTCG-TTAAGCTAGGATCTAAGAA--TT-TTTGCC------TG-AATAT----ATAAA---G-CATT-CG----TTGA---AACCGA--TTTAAATCGACTAGTCAAA----TT--------------------TTTGTTTTCTG----------CAAA----AT-AAAA------AT----TTATTCCCACC-------AAAGTTTTTTCGGA-----T----G---------------------------T--------TAGAAAAACTGTTCCAAT---TTTT-----------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
AATTCGCCCCGTCT-TCGTCAACTGTCG-TTAAGCTAGGCTCTTAGAA--CT--TTGT------GAA-AATAT----A--GTCG-TTTAAT-CG----TTGA---AATTGA--TTTATATCGATCACACGCA----TTTT-----------TCTCGTCTTCGCTTT-CGCAGTTG----CCCA----AT-AAAT------AA----TTATAACCACC-------A--GTTTTTTCGTTTCGTTGTCAT--TGTAATTTCAAATGTGTCGTCTTCTTTTGTATCTCTAAAACAGGGGTGCTCAG---TCCTAT-GG----------------------------------------------------------CACACGAGCACAA----TTGSizeHit CountTotal NormTotal
No Reads
droEug1
AATTCGGCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
AATTCGCCCCGCC--TCGCCTATG------------------------------------------------------------------------------------------------------------------------------------------------------------AAA----GT-GTGA------AA----TAGAAGTTACA-------CTA------------------------------------------------------------------------------------------------------------GTGGGCAT------AAGTA-----TT---TAGAGAATGTTCAACA---AACTCCCCGASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................................................................................................................................................................................................................TACA-------CTA------------------------------------------------------------------------------------------------------------GTGGGCAT------AAGTA-----TT---TAGA.........................2678.29580000000000000000000000000000000000000000100010001000100000000000000000000000000000401000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000200000000000000000000000090705160000000000000000000000000000000000000000000000000000000000000000002512000000100000000000000000023000000
................................................................................................................................................................................................................................CTA------------------------------------------------------------------------------------------------------------GTGGGCAT------AAGTA-----TT---TAG..........................2182.25180000000000000000000000000000000000000000001000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000200220000000001000000213000000000000000000000000000000000
..................................................................................................................................................................................................................................A------------------------------------------------------------------------------------------------------------GTGGGCAT------AAGTA-----TT---TAGAGAA......................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000001000000000000000
..................................................................................................................................................................................................................................A------------------------------------------------------------------------------------------------------------GTGGGCAT------AAGTA-----TT---TAGAG........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................................................................................................................................................................................................................................................................................................................................GTGGGCAT------AAGTA-----TT---TAGAGA.......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................................................................................................................................................................................................................GAAGTTACA-------CTA------------------------------------------------------------------------------------------------------------GTGGGCAT------............................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................GCCTATG------------------------------------------------------------------------------------------------------------------------------------------------------------AAA----GT-GTGA------AA----TAG........................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................AA----TAGAAGTTACA-------CTA------------------------------------------------------------------------------------------------------------GTGGG.....................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TATG------------------------------------------------------------------------------------------------------------------------------------------------------------AAA----GT-GTGA------AA----TAGAAG.....................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................................................................................................................................................................................................A----TAGAAGTTACA-------CTA------------------------------------------------------------------------------------------------------------GTGGGC....................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................AGAGAATGTTCAACA---AACT......1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................TGA------AA----TAGAAGTTACA-------CTA------------------------------------------------------------------------------------------------------------GT........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................................................................................................TA------------------------------------------------------------------------------------------------------------GTGGGCAT------AAGTA-----TT---TAGA.........................2190.8980000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000140000000000000000200000000000000000000000000000100000
.......................................................................................................................................................................................................................CA-------CTA------------------------------------------------------------------------------------------------------------GTGGGCAT------AAGTA-----TT---TAGA.........................2470.7150000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000
......................................................................................................................................................................................................................ACA-------CTA------------------------------------------------------------------------------------------------------------GTGGGCAT------AAGTA-----TT---.............................21200.65130000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200260000000000000000020000000000000000000000000000000000
.................................................................................................................................................................................................................................TA------------------------------------------------------------------------------------------------------------GTGGGCAT------AAGTA-----TT---TAG..........................2090.5650000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000101000000000000000000000000000000000
.....................................................................................................................................................................................................................TACA-------CTA------------------------------------------------------------------------------------------------------------GTGGGCAT------AAGTA-----T.................................21200.4590000000000000000000000000000000000000000000000000000000000100000000000000000000000100000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000001000000000000000000000000000000000
......................................................................................................................................................................................................................ACA-------CTA------------------------------------------------------------------------------------------------------------GTGGGCAT------AAGTA-----TT---TAGA.........................2570.4330000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................CA-------CTA------------------------------------------------------------------------------------------------------------GTGGGCAT------AAGTA-----TT---T............................21190.4280000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000200030000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................CTA------------------------------------------------------------------------------------------------------------GTGGGCAT------AAGTA-----TT---TA...........................2080.3830000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000100000000000000000000000000000000000
.....................................................................................................................................................................................................................TACA-------CTA------------------------------------------------------------------------------------------------------------GTGGGCAT------AAGTA-----TT---TAG..........................2570.2920000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................................................................................................................TACA-------CTA------------------------------------------------------------------------------------------------------------GTGGGCAT------AAGTA-----TT---TAGAA........................2780.2520000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................ACA-------CTA------------------------------------------------------------------------------------------------------------GTGGGCAT------AAGTA-----TT---TAGAA........................2680.2520000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................TA------------------------------------------------------------------------------------------------------------GTGGGCAT------AAGTA-----TT---TAGAA........................22100.2020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000100000000000000000000000000000000000
.....................................................................................................................................................................................................................TACA-------CTA------------------------------------------------------------------------------------------------------------GTGGGCAT------AAGTA-----..................................20200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000010000000000000000000000000000000000
........................................................................................................................................................................................................................A-------CTA------------------------------------------------------------------------------------------------------------GTGGGCAT------AAGTA-----TT---T............................20200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100020000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................TACA-------CTA------------------------------------------------------------------------------------------------------------GTGGGCAT------AAGTA-----A.................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000
.......................................................................................................................................................................................................................CA-------CTA------------------------------------------------------------------------------------------------------------GTGGGCAT------AAGTA-----TT---TAG..........................2370.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................A-------CTA------------------------------------------------------------------------------------------------------------GTGGGCAT------AAGTA-----TT---TAG..........................2270.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................TACA-------CTA------------------------------------------------------------------------------------------------------------GTGGGCAT------AAGTA-----TT---TAGT.........................2670.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................A-------CTA------------------------------------------------------------------------------------------------------------GTGGGCAT------AAGTA-----TT---TA...........................2170.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................ACA-------CTA------------------------------------------------------------------------------------------------------------GTGGGCAT------AAGTA-----..................................19200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000010000000000000000000000
................................................................................................................................................................................................................................CTA------------------------------------------------------------------------------------------------------------GTGGGCAT------AAGTA-----TT---TAC..........................21100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................TGGGCAT------AAGTA-----TT---TAGA.........................18130.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................TACA-------CTA------------------------------------------------------------------------------------------------------------GTGGGCAT------AAGTA-----TT---T............................23190.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................TACA-------CTA------------------------------------------------------------------------------------------------------------GTGGGCAT------AAGTA-----TT---.............................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................CTA------------------------------------------------------------------------------------------------------------GTGGGCAT------AAGTA-----TT---.............................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................A-------CTA------------------------------------------------------------------------------------------------------------GTGGGCAT------AAGTA-----TT---TC...........................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
......................................................................................................................................................................................................................ACA-------CTA------------------------------------------------------------------------------------------------------------GTGGGCAT------AAGT........................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................CTA------------------------------------------------------------------------------------------------------------GTGGGCAT------AAGTA-----TT---T............................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
droSim2
AATTCGCCCCGTCT-TCGCCAACCTCTG-TTAAGCTAGGCC-TAAGAA--CACA-TAT------GTTAAATAG------AGA---TGAAG--------TCGAAAA--TTAAA-TTCAATACGAGCACACGCA----TTTT------T-----TT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
No Reads
droSec2
AATTCGCGCCGCCT-TCGCAAGCCTTTG-TTAAGCTAGGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
AATTCGCCCCGCCT-TCGCCAACCTCTG-TTAAGCTAGGCC-TAGGAA--CATATAGGT------AA-AATAG--------AAGATTAAG--------TAGAAAA--TTGAA-TTCACACCGAACACACTCA----CTTC------T----TTTCGTTCTCGTCGT-TGC---------GAAA----AT-ACAAATTAATTA----TTCTTGCCACC-------AAAGTTCGTTCGGT-----T---A--GGTTT--------------------TT--------T-AATAAACTTATTAAAA---ACATCATGGCGCCCCCGG-----------GTGGACAAA-------ATAATTAATTTA-AACAAAAGGCA------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
......................................................................................TAAG--------TAGAAAA--TTGAA-TTCACACCGA..............................................................................................................................................................................................................................................................................2611.00100100000000
.....................ACCTCTG-TTAAGCTAGGCC-TAGGA..........................................................................................................................................................................................................................................................................................................................................................2430.67202000000000
...................................................................................................................................................................................................................GCCACC-------AAAGTTCGTTCGGT-----T---A--GG.............................................................................................................................................2460.33211000000000
.....................ACCTCTG-TTAAGCTAGGCC-TAGGAA--.......................................................................................................................................................................................................................................................................................................................................................2530.33101000000000
.....................ACCTCTG-TTAAGCTAGGCC-TAGGAA--CA.....................................................................................................................................................................................................................................................................................................................................................2730.33101000000000
..........................TG-TTAAGCTAGGCC-TAGGAA--CATATA.................................................................................................................................................................................................................................................................................................................................................2630.33101000000000
..........................TG-TTAAGCTAGGCC-TAGGAA--CATAT..................................................................................................................................................................................................................................................................................................................................................2530.33101000000000
.............T-TCGCCAACCTCTG-TTAAGCTAGGCC-...............................................................................................................................................................................................................................................................................................................................................................26200.20404000000000
....................................................................................................................................................................................................TAATTA----TTCTTGCCACC-------AAAGTTCGT................................................................................................................................................................26150.07101000000000
droEre2
AATTAGCGCCGCCT-TCGCCAACTTTCG-TTAAACTAGGCTCTAAGTA--CG--ATGT------GAA-AATAT----A----------AG--------TTGAAAA--TTGAA-ATCGTCCAGCGTACACGCA----TTAT------T----TTTCGA------CGCCGA----------CATA----AT-ACA--TTTATTG----TTCTTGCCACC--------AAGTT--CTCGGT-----A---T--TC--T--------------------TT--------T-AATAAACTAAATAAAA---ATTTCA-G------------------------------------------------------------------------------TSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 06/08/2015 at 03:21 PM