ID:

dpe_852

 Coordinate:

scaffold_16:788789-789072 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-43.7 -43.3 -43.2 -42.9

Flybase annnotation

CDS [Dper\GL21112-cds]; exon [dper_GLEANR_3031:2]; intron [Dper\GL21112-in]; CDS [Dper\GL21112-cds]; exon [dper_GLEANR_3031:1]; intron [Dper\GL21112-in]

No Repeatable elements found

Sense Strand Reads

-#################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------#############-------------------------------------
TATGAATAAGCTGCTTATACTGGCGCTTTGCCTGGGCGTGGCTGCTGCAGGTAGACATCTTTGAATATTGAAGGCATGAGAGTGTTGGGAAAAGTGACATTCTGATCCTGTGGTTGTGCATTTTCTTCCTTGGGCACGCTTTTCGTCTTTGCCCCTGGATCTCTGCTGGATCCCAAGTGTTGTCATAGCGTATTTTCCCTCAATGAACTACGAGGATTTACACTACACCCTTCAGACCTGTGTAATTTGAGTGTTCGAAACACGTGGCGATAAGAGGCTTTTACGTCTTGTTTTCTAAAACAACTAATGCGGTATTTTGTCTCGATCTTTACAGATTTCCAGGGAGGGTAAGTTGGGCGATAATTACTGCTGAGCTTCGACTTA
********************************************************((..........((((((..((..(((((.(((((((((((((..(((((((.((((.............(((..(((((.((.....))...)))))..)))...)))).)))))...))...))))))......)))))))....................))))).)).)))))).......))********************************************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total V042
embryo
 V111
male body		 V057
head
 V050
head
............................................................................TGAGACTGTTTGGAAAAGTGAT.............................................................................................................................................................................................................................................................................................. 22 3 2 1.00 2 0 0 2 0
..............................CCTGGGCGTGGCTGCTGCA............................................................................................................................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0
.......................................................................................................................................................................................................................................................................................................................................................................ATAATAACTGCTGAGCTT....... 18 1 1 1.00 1 1 0 0 0
........................................................ATCTTTGAATATTGAAGGCATGAGAGT............................................................................................................................................................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0
..............................................................................................................................................................................................................................CTACACCCTTCAGACCTGTGT............................................................................................................................................. 21 0 1 1.00 1 1 0 0 0
...................CTGGCGCTTTGCCTGGGCGTG........................................................................................................................................................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 1
..............................................................................................................................................................................................................................................GGTGTAATTTGAGTGTTGGAC............................................................................................................................. 21 3 4 0.75 3 0 3 0 0
..........................................................................................................................................................................................................................TACACGACACCCTTCATAGC.................................................................................................................................................. 20 3 2 0.50 1 1 0 0 0
............................................................................TGAGATTGTTTGGAAAAGTGG............................................................................................................................................................................................................................................................................................... 21 3 4 0.50 2 0 0 2 0
...............................................................................................................................................................................................................................................GTGTAATTTGAGTGTTGGAC............................................................................................................................. 20 2 4 0.50 2 0 2 0 0
.......................................................................................................................................................................................................................................................................................................................................................GAGGGTGAGTTGGGCGCT....................... 18 2 5 0.40 2 0 2 0 0
............................................................................TGATAGTGTCAGGAAAAGTGA............................................................................................................................................................................................................................................................................................... 21 3 3 0.33 1 0 0 1 0
...............................................................................................................................................................................................................................................GTGTAATTTGAGTGTTGGACA............................................................................................................................ 21 2 4 0.25 1 0 1 0 0
............................................................................TGAGAGTGTTGTGAAAGCTGA............................................................................................................................................................................................................................................................................................... 21 3 4 0.25 1 0 0 1 0
............................................................................TGAGAGTGTTATGAAAACTGA............................................................................................................................................................................................................................................................................................... 21 3 5 0.20 1 0 0 1 0
.........................................................................................................................TTTCATGCTTGGGCACGC..................................................................................................................................................................................................................................................... 18 2 5 0.20 1 1 0 0 0
............................................................................AGAGAGTGTTGGGAGAAG.................................................................................................................................................................................................................................................................................................. 18 2 15 0.07 1 0 0 0 1
............................................................................TGAGATTATTTGGAAAAGTGA............................................................................................................................................................................................................................................................................................... 21 3 17 0.06 1 0 0 1 0

Anti-sense strand reads

ATACTTATTCGACGAATATGACCGCGAAACGGACCCGCACCGACGACGTCCATCTGTAGAAACTTATAACTTCCGTACTCTCACAACCCTTTTCACTGTAAGACTAGGACACCAACACGTAAAAGAAGGAACCCGTGCGAAAAGCAGAAACGGGGACCTAGAGACGACCTAGGGTTCACAACAGTATCGCATAAAAGGGAGTTACTTGATGCTCCTAAATGTGATGTGGGAAGTCTGGACACATTAAACTCACAAGCTTTGTGCACCGCTATTCTCCGAAAATGCAGAACAAAAGATTTTGTTGATTACGCCATAAAACAGAGCTAGAAATGTCTAAAGGTCCCTCCCATTCAACCCGCTATTAATGACGACTCGAAGCTGAAT
*********************************************************************************************************************************************((..........((((((..((..(((((.(((((((((((((..(((((((.((((.............(((..(((((.((.....))...)))))..)))...)))).)))))...))...))))))......)))))))....................))))).)).)))))).......))******************************************************** 		Read size # Mismatch Hit Count Total Norm Total V042
embryo
 M042
female body
 V111
male body		 V057
head
 M021
embryo
..............................................................................................ACTGTAAGACTAGGACACCGA............................................................................................................................................................................................................................................................................. 21 1 1 1.00 1 0 0 1 0 0
.......................................................................................................................................................................................................................................AGTCTGGACACAATAACCTC..................................................................................................................................... 20 2 1 1.00 1 1 0 0 0 0
.......................................................................................................CTAGGACACCAAAACCTAA...................................................................................................................................................................................................................................................................... 19 2 2 0.50 1 1 0 0 0 0
.....................................................................................................................................................................................................................................................AAACCCACAGGCCTTGTGCAC...................................................................................................................... 21 3 2 0.50 1 0 1 0 0 0
......................................................................................................................................................................................................................................................AACCCACAGGCCTTGTGCAC...................................................................................................................... 20 3 3 0.33 1 0 1 0 0 0
......................................................................................................................................................................................................................CCAAATGTGAGGTGGGAACT...................................................................................................................................................... 20 3 3 0.33 1 0 0 0 1 0
.......................................................................................................................................................................................................................................................ACCCACAGGCCTTGTGCAC...................................................................................................................... 19 3 14 0.14 2 0 2 0 0 0
......................................................................................................................................................................................................................................................................GCACTGCTATTGCCCGAAA....................................................................................................... 19 3 8 0.13 1 0 0 0 0 1
.................................................CCATCTGTAGGAAGTAATAA........................................................................................................................................................................................................................................................................................................................... 20 3 9 0.11 1 1 0 0 0 0
...............................................................................................................................................................................................................................ATGTGGGGAGTCGGTACACA............................................................................................................................................. 20 3 16 0.06 1 0 0 0 1 0
..................................................................................................................................................................................................................................................ACTAAACTCACAGGCCTTG........................................................................................................................... 19 3 18 0.06 1 0 1 0 0 0
............................................................AGCTTAGTACTTCCGTACT................................................................................................................................................................................................................................................................................................................. 19 3 20 0.05 1 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_16:788739-789122 - dpe_852 TATGAATAAGCTGCTTATACTGGCGCTTTGCCTGGGCGTGGCTGCTGCAGGTAGACATCT-------------------------------TTGAATATTGAAGGCATGAGAGTG--TTGGGAAAAGTGAC-------ATT--------------------------------------------CTGATCCTGTGGTTGTGCAT-----------T----------------------------TTCTTCC-TTGGGCACGCTTTTCG---TCTTTGCCCCTGGATC-TC---TGCTGGATCCC--------AAGT--GTTGT-CATAG-------CGTA-TTTTCCCTCAATGAACTACGAGGATTTACACTACACCCTTCA-GACCTGTGTAATTTGA---GTGTTC--GAAACACGTGGCGATAAGAGGC------------TTT---TACGT-------------------------CT-TGTTTTCTA--AAAC-------------------------------------------------------------------A---ACT---AATGCGGTAT----TTTGTCTCGA-TCTTTACAGATTTCCAGGGAGGGTAAGTTGGGCG-ATA------ATTA------CTGCTGAGCTTCGAC-----TT--------A
dp5 4_group4:6103910-6104285 + TATGAATAAGCTGCTTATACTGGCGCTTTGCCTGGGCGTGGCTGCTGCAGGTAGACATCT-------------------------------TTGAATATTGAAGGCATGAGAGTG--TTGGGAAAAGTGAC-------ATT--------------------------------------------CTGATCCTGTGGTTGTGCAT-----------T----------------------------TTCTTCC-TTGGGCACGCTTTTCG---TCTTTGCC---------TC---TGCTGGATCCC--------AAGT--GTTGT-CATCG-------CGTA-TTTTCCCTCAATGAACTACGAGGATTTACACTACACCCTTCA-GACCTGTGTAATTTGA---GTGTTC--GAAACACGTGGCGATAAGAGGC------------TTT---TACGT-------------------------CT-TGTTTTCTA--AAAC-------------------------------------------------------------------A---ACT---AATGCGGTAT----TTTGTCTCGA-TCTTTACAGATTTCCAGGGAGGGTAAGTTGGGCG-ATA------ATTA------CTGCTGAGCTTCGAC-----TT--------A
droWil2 scf2_1100000004516:64672-64726 + TATGAATAAACTATTCGTGCTGGCCCTATGTCTGGGTGTGGTCTGTGGAGGTAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12723:3313969-3314081 - TATGAGATCATTGTTGGTGCTGGCTCTGTGCCTGGGTGTGGTCTGTGCAGGTAAAGAGCTCCT-TTTAAGTA----------CAAGGTGCCATTCAGAGTGCAAA------AGTA--TCGAAAACAATGTC-------A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6500:6481949-6482387 + TATGAGATCTATATTGGTGCTGGCTCTGTGCCTGGGCGTGGTCTGTGCAGGTAAAGAGCTCCT-TTA-GCCCCCCCCTCCCATACAGTGCAATTAAAAGTGAAAGAATAAATCAG--AAAGCAAAAGAGAT-------CCTTACATCATATCATGCGGGAATATTCTCCCACTCTCTCTCTCTCTCT-------------CTC--CCTCTCTCTTT-------------------------------------CT-----------TCG---TCTGTGTTTC-G----G--CTG----------A--------C-G-----TAT-CACACGATTA--CGCA-TTATTTCTGTATGAACT------TTTTATACAACAC-----G-GAATTGTGCAACGTCTCGT----TGCAGGCATGTGTCGAGATAAGAGAT------------TCC---AGTTTCCCAATTAGAATTACAATCAAT--TTCATG--------------------------------------------------------------------------GAAATGCAATGAGAATAATGCCTTTTCTTTCTTCTAA--TTCTCTTATAGATTTTGAGAACAGGTAAGTTGATCCCACTTGAGAGACT-GT-----------CCTT---------------TGGAA
droGri2 scaffold_7129:569-972 + TATGAGATCATTGTTGCTGCTCGCCCTCTGCCTGGGTGTGGTCTGTGCAGGTAAAGAGCTACT-CCT-ATTT----------ATGTATGCCCAAAGA----------------------------------------------------------------------------------------------CTGGCAT------------------AAAGTGTTCAAAAAAATCCTTTTGACGTTTCCCTAT-TTGGTGACAATTGC--AAAA-CGTGTTTT-A----A--CTC----------G--------TTG-ACTTAAT-CA----------GTCG-T-TGTGCCGAATAAACT------TTTAACACAACAC-------AAATTGTGCAACGTGT---GACTTACAGGCATGTGTCGAGATTAGATGACGCCACACTTATTTG---AATTACCCAATCAAAAATACAATCAAAAAATATTA--------------------------------------------------------------------------AAAAACGAATAATAAAAATACACTTT----TTAATGT--TTCTCTTGCAGATTTCCAGGACAGGTAAGTTGGTCA-ATGTGAA--AGTC------AAGAAGAACTTCAACTTTGATA--------A
droAna3 scaffold_12916:5038405-5038815 + TATGAATAAGTTCTTGATTCTGGCCCTGTGTCTGGGTGTGGTGGCTGCAGGTAGTGCAATATT-TTA-AATA-----------------TT-TTAATA----------------------ATATTATTGTG-------TCT--------------------------------------------CGGATCCTGTCGACTGTGTC-----------T----------------------------TTCATCC-TGGAAGCGGC------TTATCAGTAGTTG-A----G--ATT----------A--------TAG-ATTGCAT-CA----------GGGC-TTTTCCCTGAATGAAAT------ATTTACACAACACCTT---------GTGTAATTTTTACAAAACGT--GGCGCGTGTGCTGATAAGAGCT------------TAATTA---------TTTGTAATTTTAATGCGT--ACT-TGTTTTTCACAAAATAATCATCCAATACCATTGTTAGTTGTACATTACTTACTCTATATTTCAATTCCAAAATG--------------------TAATGTTT----GTTTTCT--GTCTTTTACAGATTTCCAAGCTAGGTAAGTCT---T-AAA------ACT-GGTTTT---TTAAATTT----------C--------A
droBip1 scf7180000396366:137818-138213 + -ATGAACAAGTTCTTAATTCTGGCCCTGTGTCTGGGTGTGGTCGCTGCAGGTAGTGCAAGATT-TTA-TATT--------------------TTAATA----------------------TTAACATTGTG-------TCT--------------------------------------------CGGGTCCTGACGACTGTC--GATCTCTCATC------------------------------------CTGGAAGCGGC------TTATCGCTACTTG-A----G--ATT----------A--------TAG-ATCTCAT-CA----------GGGA-TTTTCCCTGAATGAAAT------ATTTACACAACACCTT---------GTGTAATTTTTACAAAACGT--GGCGCGTGTGGCGATAAGAGCC------------TAATTAATATTTTCACTTACGATTCTAATGCGT--TCTATGTTTCTTACACAATAATCATCTA---------------------------------------------GAATCTAGAACACAAATATT---AATGATGTTT----CTTTTCT--GTCTCTTACAGATTTCCAGGCTAGGTAAGTCAAAAA-GTA--------TA------CGAATTATATT-----TAAAAT--------A
droKik1 scf7180000302684:1005065-1005317 - AATGAATAAGCTGCTGATTTTGGCCCTCTGCCTGGGTGTGGTCTGTGCAGGTAGTGAGCGATT-CTA-AAAT-----------------TTCTTAAAAC--------------------------AA------------TT----------CA----------------------AATCCTGCCTA-AGCCGAATCGATTCCG------------------------------------------AATCGCCTTGGTGGTGGC-----CTTATCAGCTCAGTCG----G--ATCT---------G--------TGGT--GTCGT-CATTGCCATTGGTGGATTTTACCCTCAATGAAAT------ATTTACACAACACCTTGGA-AAATTGTGTAATC----------GT--GGCGCGTGTTGTGATTAGAGAT------------T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000448563:2570-2828 + AATGAACAAGTTGCTGATTTTCGCCCTTTGCTTGGGTGTGGTCTGTGCAGGTAGTGAAGTTCT-TCA-AAAT----------TAAATACTTCTGAAAACCAAATA------CATA--TGGT--ACAGTGAG-------CAC--------------------------------------------CAGGTCCTGTTAATCTGATT-----------C----------------------------GAACATG-GAAAGACTCC------TTATCTG---------------ATC----------T--------GAAT--GTCGTACA----------ATGT-TTTTCCCTCAATGAAAT------ATTTACACAACATCTTGGGAAAATTGTGCAATTTCCCGGGAATGA--AGCGCGTGTGGCGATAAGAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491046:3593680-3593750 + ATTTTGTAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGCAGATTTCCAGGAAAGGTAAATTGGATT-AAA------AATT-CCTCACTCTTGATCT------TAAATT--------A
droRho1 scf7180000773222:19678-19958 - AATGAATAAATTGCTGATTTTGGCCCTTTGTCTGGGTGTGGTCTGTGGAGGTAGTGAAATATT-TCTGAAAT----------TAAATATTCTTTAAAATTACAAA------TAAA--AAGTAAA--GTGCGTACATATGTT--------------------------------------------CAGATCCTG------------------------------------------------------TTTT-TTG-GGCTGC------TTATCAGCTCCGGTG----A--ATCT---------CAGTAATCTTAGT--GTCGT-CAGCAGCATTATCGGT-TTTTCCCTGAATGAAAT------ATTTACACAACATCTTGGGAAAATTGTGTAATTTACTAAAAATGT--GGCGCGTGTGGCGATAAGAGAT------------T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000302422:4252681-4252811 + AATGAATAAGCTGCTGATTCTGGCCCTTTGCCTGGGCGTGGTCTGCGGAGGTAGTGAAATTTT-CCG-AACT----------CAAATAATCCTGAAAATTGCAAA------TGAG--GTGTAAATAGTGCT-------CTC--------------------------------------------TGGCTCCTGTGGATGTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000410539:23769-24036 + AATGAACAAGCTGCTGATTTTGGCCCTTTGCCTGGGCGTGGTCTGTGCAGGTAGTGAAATT-T-GTA-AAAT----------CAAATATTCCTGAAAATTACAAA------CAGG--ATGTGAATAGTGCT-------GCC--------------------------------------------TAGATCCTGTTGATAAGGTT-----------C----------------------------TAGTTTT-TTGAGGCTTT------CTATCGGCT-----------------------------------GCGT--GTCGT-CAACAGCTCT--CGGG-TTTTTCCTCAATGAAAT------ATTTACACAATATTATGGGAAAGTTGTGTAATTTTCTGAGAATGC--GACGCGTGTGCCGATAAGAGAT------------T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409463:1702093-1702379 - AATGAATAAGCTGCTGATTTTGGCCCTCTGTCTGGGTGTGGTCTGTGGAGGTATTGAAATTTT-CCT-CAAT----------TGAAAGCTCCTTAAAAATGCAAA------CAATATATGTTAAGAGTGTT-------TTT--------------------------------------------GAAATCCTGCGAATCTGGCA-----------A----------------------------AAGTTTT-TTGAGGCTGC------TTATCAGCTGC---T--TA-TC---TGCTGC-TTCC--------GAGT--GTCGT-CAGCGACTTT--TGGG-TTTTTCCTGAATGAAAT------TTTTACACAACACCTTGGG-AAATTGTGTAATTTTCTGAGAATAT--AGCGCGTGCAGCGATAAGAGAT------------T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dm3 chr2L:19385739-19385853 - GGGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT---GAAAT-------------------------CT-TCTTGCGTA--CGTT-------------------------------------------------------------------A---ACT---AATACATTTT----CCTCTTTTTA-TCATTACAGATTTCCAACAAAGGTAATTTTAATT-TGA------AGTG-CCTCA---------TT-----TAATATACATTCTAA
droSim2 2l:18921348-18921618 - dsi_26634 AATGAATAAGCTGCTGGTTTTGGCCCTTTGCCTGGGTGTGGTCTGTGGAGGTAGTGCACTGTTCCCA-ATAT----------CTGCTAGTCCAGAAAATTACACC------TAAG--ATGTAAACTGTGCC-------GGC--------------------------------------------TTGGTCCTGGCGATCTCATC-----------C----------------------------AAGTGTT-TTGAGGCTGC------CTATCAGCACTTGTG----G--ATC----------A--------GAGT--GTCGT-CAGTGGCACT--TGGG-TTTTTCCTGAATGAAAT------ATTTACACAACACCCTGGG-AAATTGTGTAATTT---------AT--GGCGCGTGTGGCGATAAGAGAT------------T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_7:3002287-3002543 - AATGAATAAGCTGCTGGTTTTGGCCCTTTGCCTGGGTGTGGTCTGTGGAGGTAGTGCAATA----------T----------CTGCTAGTCCAGAAAATTACACC------TAAG--ATGTAAACTCTGC--------------------------------------------------------CGGTCCTGGCGATCTCATC-----------C----------------------------AAGTGTT-TTGAGGCTGC------CTATCAGTACTTGTG----G--ATC----------A--------TAGT--GTCGT-CAGTGGCACT--TGGG-TTTTTCCTGAATGAAAT------ATTTACACTGCACCCTGGG-AAATTGTGTAATTT---------AT--GGCGCGTGTGACGATAAGAGAT------------T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 2R:5883831-5884100 - AATGAATAAGCTGCTGGTTTTGGCCCTTTGCCTGGGTGTGGTCTGTGGAGGTAGTGCACTGTT-CCA-AAAT----------CAACTTTTCCCGAAAATTACACC------TAAG--ATGTAACCAGTGCC-------GGC--------------------------------------------TTGGTCCTGTCGATCTGATC-----------C----------------------------AAGTTTT-TTGAGGCTGC------CTATCAGTGCTTGTG----G--ATC----------A--------GTGA--GTCGT-CAGTGGCACT--TGGT-TTTTTCCTGAATGAAAT------ATTTACACAACAACCCGGG-AAATTGTGTAATTT---------AT--GGCGCGTGTGGCGATAGAAGAT------------T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4845:4908690-4908962 + AATGAATAAGCTGCTGGTCTTGGCCCTTTGCCTGGGTGTGGTCTGTGGAGGTAGTGCACTGTT-CCG-AAAT----------AAGCTAATCCAGAGAATTGCACC------TAAG--ATGTAGC----------------------------------------------------------------------------TGATC-----------C----------------------------AA-TTTT-TCGAGACTGC------CTATCAGTGCA-GTG----G--ATC----------G--------CAGT--GTCGT-CAGTGGCACT--T-GT-TTTTCCCTGAATGAAAT------ATTTACACAACACCCTG---AAATTGTGTAATTT---------AT--GGCGCGTGTGGCGATAGGAGAT------------T--------------------------------------------GTA--AACC-------------------------------------------------------------------G---ACC-GAAATACACTAT----TTTCCCTTG--------------------------------------------------------------------------------------A

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
TATGAATAAGCTGCTTATACTGGCGCTTTGCCTGGGCGTGGCTGCTGCAGGTAGACATCT-------------------------------TTGAATATTGAAGGCATGAGAGTG--TTGGGAAAAGTGAC-------ATT--------------------------------------------CTGATCCTGTGGTTGTGCAT-----------T----------------------------TTCTTCC-TTGGGCACGCTTTTCG---TCTTTGCCCCTGGATC-TC---TGCTGGATCCC--------AAGT--GTTGT-CATAG-------CGTA-TTTTCCCTCAATGAACTACGAGGATTTACACTACACCCTTCA-GACCTGTGTAATTTGA---GTGTTC--GAAACACGTGGCGATAAGAGGC------------TTT---TACGT-------------------------CT-TGTTTTCTA--AAAC-------------------------------------------------------------------A---ACT---AATGCGGTAT----TTTGTCTCGA-TCTTTACAGATTTCCAGGGAGGGTAAGTTGGGCG-ATA------ATTA------CTGCTGAGCTTCGAC-----TT--------ASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..............................CCTGGGCGTGGCTGCTGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
........................................................ATCT-------------------------------TTGAATATTGAAGGCATGAGAGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001001000
....................................................................................................................................................................................................................................................................................................................................................................................CTACACCCTTCA-GACCTGTGT.....................................................................................................................................................................................................................................................................................................2111.001001000
...................CTGGCGCTTTGCCTGGGCGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000100
dp5
TATGAATAAGCTGCTTATACTGGCGCTTTGCCTGGGCGTGGCTGCTGCAGGTAGACATCT-------------------------------TTGAATATTGAAGGCATGAGAGTG--TTGGGAAAAGTGAC-------ATT--------------------------------------------CTGATCCTGTGGTTGTGCAT-----------T----------------------------TTCTTCC-TTGGGCACGCTTTTCG---TCTTTGCC---------TC---TGCTGGATCCC--------AAGT--GTTGT-CATCG-------CGTA-TTTTCCCTCAATGAACTACGAGGATTTACACTACACCCTTCA-GACCTGTGTAATTTGA---GTGTTC--GAAACACGTGGCGATAAGAGGC------------TTT---TACGT-------------------------CT-TGTTTTCTA--AAAC-------------------------------------------------------------------A---ACT---AATGCGGTAT----TTTGTCTCGA-TCTTTACAGATTTCCAGGGAGGGTAAGTTGGGCG-ATA------ATTA------CTGCTGAGCTTCGAC-----TT--------ASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................................................................................................................GTGAC-------ATT--------------------------------------------CTGATCCTGTGGTTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000001000
..................ACTGGCGCTTTGCCTGGGCGTGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000001000
.....................GGCGCTTTGCCTGGGCGTGGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
.......................CGCTTTGCCTGGGCGTGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
..................ACTGGCGCTTTGCCTGGGCGTGGCTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
...................CTGGCGCTTTGCCTGGGCGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...........................................................................................................................................TT--------------------------------------------CTGATCCTGTGGTTGTGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...........................................................................................................................................TT--------------------------------------------CTGATCCTGTGGTTGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.........................................................................................................................................................................................................GCAT-----------T----------------------------TTCTTCC-TTGGGCACGCTTTTC...................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
....................................................................................................................................................................................................................................................................................TGCC---------TC---TGCTGGATCCC--------AAGT--................................................................................................................................................................................................................................................................................................................................................................................2111.0010010000000
........................GCTTTGCCTGGGCGTGGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010000
droWil2
TATGAATAAACTATTCGTGCTGGCCCTATGTCTGGGTGTGGTCTGTGGAGGTAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..........................TATGTCTGGGTGTGGTCTGTGGAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100001
..........CTATTCGTGCTGGCCCTATGTCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000
..............................TCTGGGTGTGGTCTGTGGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
.............TTCGTGCTGGCCCTATGTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000
..........CTATTCGTGCTGGCCCTATG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100001
...........TATTCGTGCTGGCCCTATGTCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000
.............TTCGTGCTGGCCCTATGTCTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000
...........TATTCGTGCTGGCCCTATG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000
....AATAAACTATTCGTGCTGGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000
.............................GTCTGGGTGTGGTCTGTGGAGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
..........CTATTCGTGCTGGCCCTATGTC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000
.........................CTATGTCTGGGTGTGGTCTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
...........................ATGTCTGGGTGTGGTCTGTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
.....................GGCCCTATGTCTGGGTGTGGTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100001
.........ACTATTCGTGCTGGCCCTATGTCTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100001
.............................GTCTGGGTGTGGTCTGTGGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100001
droVir3
TATGAGATCATTGTTGGTGCTGGCTCTGTGCCTGGGTGTGGTCTGTGCAGGTAAAGAGCTCCT-TTTAAGTA----------CAAGGTGCCATTCAGAGTGCAAA------AGTA--TCGAAAACAATGTC-------A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......................CTCTGTGCCTGGGTGTGGTCTGTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000001000
................GTGCTGGCTCTGTGCCTGGGTGTGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000001000
.........ATTGTTGGTGCTGGCTCTGTGCCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
...........................GTGCCTGGGTGTGGTCTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000001000
.....GATCATTGTTGGTGCTGGCTCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000000000000000000000000000000000000000000000000000000000000
..........................TGTGCCTGGGTGTGGTCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000010000000000000000000000000000000000000000
.......................CTCTGTGCCTGGGTGTGGTCTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000100000000000000000000000000000000000000000
........................TCTGTGCCTGGGTGTGGTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000100000000000000000000000000000000000000000
............................................................................................TTCAGAGTGCAAA------AGTA--TCGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
................GTGCTGGCTCTGTGCCTGGGTGTGGTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000010000000000000000000000000000000000000000
droMoj3
TATGAGATCTATATTGGTGCTGGCTCTGTGCCTGGGCGTGGTCTGTGCAGGTAAAGAGCTCCT-TTA-GCCCCCCCCTCCCATACAGTGCAATTAAAAGTGAAAGAATAAATCAG--AAAGCAAAAGAGAT-------CCTTACATCATATCATGCGGGAATATTCTCCCACTCTCTCTCTCTCTCT-------------CTC--CCTCTCTCTTT-------------------------------------CT-----------TCG---TCTGTGTTTC-G----G--CTG----------A--------C-G-----TAT-CACACGATTA--CGCA-TTATTTCTGTATGAACT------TTTTATACAACAC-----G-GAATTGTGCAACGTCTCGT----TGCAGGCATGTGTCGAGATAAGAGAT------------TCC---AGTTTCCCAATTAGAATTACAATCAAT--TTCATG--------------------------------------------------------------------------GAAATGCAATGAGAATAATGCCTTTTCTTTCTTCTAA--TTCTCTTATAGATTTTGAGAACAGGTAAGTTGATCCCACTTGAGAGACT-GT-----------CCTT---------------TGGAASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.............................GCCTGGGCGTGGTCTGTGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000100
.........................CTGTGCCTGGGCGTGGTCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
................GTGCTGGCTCTGTGCCTGGGCGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
........CTATATTGGTGCTGGCTCTGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.........TATATTGGTGCTGGCTCTGTGCCTGGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000001
....................TGGCTCTGTGCCTGGGCGTGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
..........................TGTGCCTGGGCGTGGTCTGTGCAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
...........................................................................................................................................................................CTCTCTCTCTCTCTCT-------------CTC--C.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000010
droGri2
TATGAGATCATTGTTGCTGCTCGCCCTCTGCCTGGGTGTGGTCTGTGCAGGTAAAGAGCTACT-CCT-ATTT----------ATGTATGCCCAAAGA----------------------------------------------------------------------------------------------CTGGCAT------------------AAAGTGTTCAAAAAAATCCTTTTGACGTTTCCCTAT-TTGGTGACAATTGC--AAAA-CGTGTTTT-A----A--CTC----------G--------TTG-ACTTAAT-CA----------GTCG-T-TGTGCCGAATAAACT------TTTAACACAACAC-------AAATTGTGCAACGTGT---GACTTACAGGCATGTGTCGAGATTAGATGACGCCACACTTATTTG---AATTACCCAATCAAAAATACAATCAAAAAATATTA--------------------------------------------------------------------------AAAAACGAATAATAAAAATACACTTT----TTAATGT--TTCTCTTGCAGATTTCCAGGACAGGTAAGTTGGTCA-ATGTGAA--AGTC------AAGAAGAACTTCAACTTTGATA--------ASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.............................GCCTGGGTGTGGTCTGTGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2024.00862
...............................CTGGGTGTGGTCTGTGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1823.50761
..............................CCTGGGTGTGGTCTGTGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1923.00624
..................GCTCGCCCTCTGCCTGGGTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2223.00660
...............GCTGCTCGCCCTCTGCCTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1922.50550
.........ATTGTTGCTGCTCGCCCTCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2022.00440
.........................CTCTGCCTGGGTGTGGTCTGTGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2422.00440
..TGAGATCATTGTTGCTGCTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2022.00413
...............GCTGCTCGCCCTCTGCCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1821.50330
..................GCTCGCCCTCTGCCTGGGTGTGGTCTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2721.50330
......................GCCCTCTGCCTGGGTGTGGTCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2221.50330
.....GATCATTGTTGCTGCTCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1821.50330
......................GCCCTCTGCCTGGGTGTGGTCTGTGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2721.50330
...........................CTGCCTGGGTGTGGTCTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1921.50321
.ATGAGATCATTGTTGCTGCTCGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2421.00211
......................GCCCTCTGCCTGGGTGTGGTCTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2421.00220
........................CCTCTGCCTGGGTGTGGTCTGTGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2521.00220
.......................CCCTCTGCCTGGGTGTGGTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2021.00220
.........................CTCTGCCTGGGTGTGGTCTGTGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2321.00211
...................CTCGCCCTCTGCCTGGGTGTGGTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2421.00220
..............................CCTGGGTGTGGTCTGTGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1821.00220
.........................CTCTGCCTGGGTGTGGTCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1921.00220
...........................CTGCCTGGGTGTGGTCTGTGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2221.00220
.ATGAGATCATTGTTGCTGCTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2121.00202
..........................TCTGCCTGGGTGTGGTCTGTGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2321.00220
...............GCTGCTCGCCCTCTGCCTGGGTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2521.00220
...............GCTGCTCGCCCTCTGCCTGGGTGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2421.00220
..TGAGATCATTGTTGCTGCTCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2121.00220
....................TCGCCCTCTGCCTGGGTGTGGTCTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2621.00220
...................CTCGCCCTCTGCCTGGGTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2121.00220
........................CCTCTGCCTGGGTGTGGTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1921.00220
......................GCCCTCTGCCTGGGTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1821.00220
....AGATCATTGTTGCTGCTCGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2021.00220
....................TCGCCCTCTGCCTGGGTGTGGTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.50101
.ATGAGATCATTGTTGCTGCTCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.50101
............GTTGCTGCTCGCCCTCTGCCTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.50110
..TGAGATCATTGTTGCTGCTCGCCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.50110
............GTTGCTGCTCGCCCTCTGCCTGGGTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2820.50110
..............................CCTGGGTGTGGTCTGTGCAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.50101
............GTTGCTGCTCGCCCTCTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.50110
.......................CCCTCTGCCTGGGTGTGGTCTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.50110
.......................CCCTCTGCCTGGGTGTGGTCTGTGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.50110
...........................CTGCCTGGGTGTGGTCTGTGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.50110
..................GCTCGCCCTCTGCCTGGGTGTGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.50110
............................TGCCTGGGTGTGGTCTGTGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.50110
TATGAGATCATTGTTGCTGCTCGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.50101
.........................CTCTGCCTGGGTGTGGTCTGTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.50110
TATGAGATCATTGTTGCTGCTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.50110
..................GCTCGCCCTCTGCCTGGGTGTGGTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.50110
....AGATCATTGTTGCTGCTCGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.50110
..TGAGATCATTGTTGCTGCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.50101
.............................GCCTGGGTGTGGTCTGTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.50101
......................GCCCTCTGCCTGGGTGTGGTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.50110
...................CTCGCCCTCTGCCTGGGTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.50110
........................CCTCTGCCTGGGTGTGGTCTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.50101
...GAGATCATTGTTGCTGCTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.50101
......ATCATTGTTGCTGCTCGCCCTCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.50110
..........................TCTGCCTGGGTGTGGTCTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.50110
.....GATCATTGTTGCTGCTCGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.50110
..................GCTCGCCCTCTGCCTGGGTGTGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.50110
..........................TCTGCCTGGGTGTGGTCTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.50110
................CTGCTCGCCCTCTGCCTGGGTGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.50101
.....GATCATTGTTGCTGCTCGCCCTCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.50110
...........................CTGCCTGGGTGTGGTCTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.50110
........................CCTCTGCCTGGGTGTGGTCTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.50101
..........................TCTGCCTGGGTGTGGTCTGTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.50110
.........ATTGTTGCTGCTCGCCCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.50110
............GTTGCTGCTCGCCCTCTGCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.50110
..TGAGATCATTGTTGCTGCTCGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.50101
....AGATCATTGTTGCTGCTCGCCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.50110
.....................CGCCCTCTGCCTGGGTGTGGTCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.50110
......ATCATTGTTGCTGCTCGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.50110
.ATGAGATCATTGTTGCTGCTCGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.50110
......................GCCCTCTGCCTGGGTGTGGTCTGTGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2820.50110
.........ATTGTTGCTGCTCGCCCTCTGCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.50110
.........ATTGTTGCTGCTCGCCCTCTGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.50110
........................CCTCTGCCTGGGTGTGGTCTGTGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.50110
..........TTGTTGCTGCTCGCCCTCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.50110
....AGATCATTGTTGCTGCTCGCCCTCTGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2720.50110
..................GCTCGCCCTCTGCCTGGGTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.50110
.....................CGCCCTCTGCCTGGGTGTGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.50110
..............................CCTGGGTGTGGTCTGTGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.50101
...GAGATCATTGTTGCTGCTCGCCCTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.50110
................CTGCTCGCCCTCTGCCTGGGTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.50110
...................CTCGCCCTCTGCCTGGGTGTGGTCTGTGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3020.50101
.........................CTCTGCCTGGGTGTGGTCTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.50101
...............................CTGGGTGTGGTCTGTGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.50110
...GAGATCATTGTTGCTGCTCGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.50110
...GAGATCATTGTTGCTGCTCGCCCTCTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2720.50110
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGATTTCCAGGACAGACT............................................................2030.33101
droAna3
TATGAATAAGTTCTTGATTCTGGCCCTGTGTCTGGGTGTGGTGGCTGCAGGTAGTGCAATATT-TTA-AATA-----------------TT-TTAATA----------------------ATATTATTGTG-------TCT--------------------------------------------CGGATCCTGTCGACTGTGTC-----------T----------------------------TTCATCC-TGGAAGCGGC------TTATCAGTAGTTG-A----G--ATT----------A--------TAG-ATTGCAT-CA----------GGGC-TTTTCCCTGAATGAAAT------ATTTACACAACACCTT---------GTGTAATTTTTACAAAACGT--GGCGCGTGTGCTGATAAGAGCT------------TAATTA---------TTTGTAATTTTAATGCGT--ACT-TGTTTTTCACAAAATAATCATCCAATACCATTGTTAGTTGTACATTACTTACTCTATATTTCAATTCCAAAATG--------------------TAATGTTT----GTTTTCT--GTCTTTTACAGATTTCCAAGCTAGGTAAGTCT---T-AAA------ACT-GGTTTT---TTAAATTT----------C--------ASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........................CTGTGTCTGGGTGTGGTGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002200000
..............TGATTCTGGCCCTGTGTCTGGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
...................CTGGCCCTGTGTCTGGGTGTGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000010
....................TGGCCCTGTGTCTGGGTGTGGTGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
.............TTGATTCTGGCCCTGTGTCTGGGTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001001000
....................TGGCCCTGTGTCTGGGTGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
......................GCCCTGTGTCTGGGTGTGGTGGCTGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
.......AAGTTCTTGATTCTGGCCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
.........................CTGTGTCTGGGTGTGGTGGCTGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000100
........................CCTGTGTCTGGGTGTGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
...............GATTCTGGCCCTGTGTCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
...............GATTCTGGCCCTGTGTCTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.......................CCCTGTGTCTGGGTGTGGTGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
.............................GTCTGGGTGTGGTGGCTGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
.....................GGCCCTGTGTCTGGGTGTGGTGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000
..........TTCTTGATTCTGGCCCTGTGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
droBip1
-ATGAACAAGTTCTTAATTCTGGCCCTGTGTCTGGGTGTGGTCGCTGCAGGTAGTGCAAGATT-TTA-TATT--------------------TTAATA----------------------TTAACATTGTG-------TCT--------------------------------------------CGGGTCCTGACGACTGTC--GATCTCTCATC------------------------------------CTGGAAGCGGC------TTATCGCTACTTG-A----G--ATT----------A--------TAG-ATCTCAT-CA----------GGGA-TTTTCCCTGAATGAAAT------ATTTACACAACACCTT---------GTGTAATTTTTACAAAACGT--GGCGCGTGTGGCGATAAGAGCC------------TAATTAATATTTTCACTTACGATTCTAATGCGT--TCTATGTTTCTTACACAATAATCATCTA---------------------------------------------GAATCTAGAACACAAATATT---AATGATGTTT----CTTTTCT--GTCTCTTACAGATTTCCAGGCTAGGTAAGTCAAAAA-GTA--------TA------CGAATTATATT-----TAAAAT--------ASizeHit CountTotal NormTotal
No Reads
droKik1
AATGAATAAGCTGCTGATTTTGGCCCTCTGCCTGGGTGTGGTCTGTGCAGGTAGTGAGCGATT-CTA-AAAT-----------------TTCTTAAAAC--------------------------AA------------TT----------CA----------------------AATCCTGCCTA-AGCCGAATCGATTCCG------------------------------------------AATCGCCTTGGTGGTGGC-----CTTATCAGCTCAGTCG----G--ATCT---------G--------TGGT--GTCGT-CATTGCCATTGGTGGATTTTACCCTCAATGAAAT------ATTTACACAACACCTTGGA-AAATTGTGTAATC----------GT--GGCGCGTGTTGTGATTAGAGAT------------T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
AATGAACAAGTTGCTGATTTTCGCCCTTTGCTTGGGTGTGGTCTGTGCAGGTAGTGAAGTTCT-TCA-AAAT----------TAAATACTTCTGAAAACCAAATA------CATA--TGGT--ACAGTGAG-------CAC--------------------------------------------CAGGTCCTGTTAATCTGATT-----------C----------------------------GAACATG-GAAAGACTCC------TTATCTG---------------ATC----------T--------GAAT--GTCGTACA----------ATGT-TTTTCCCTCAATGAAAT------ATTTACACAACATCTTGGGAAAATTGTGCAATTTCCCGGGAATGA--AGCGCGTGTGGCGATAAGAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
ATTTTGTAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTTGCAGATTTCCAGGAAAGGTAAATTGGATT-AAA------AATT-CCTCACTCTTGATCT------TAAATT--------ASizeHit CountTotal NormTotal
No Reads
droRho1
AATGAATAAATTGCTGATTTTGGCCCTTTGTCTGGGTGTGGTCTGTGGAGGTAGTGAAATATT-TCTGAAAT----------TAAATATTCTTTAAAATTACAAA------TAAA--AAGTAAA--GTGCGTACATATGTT--------------------------------------------CAGATCCTG------------------------------------------------------TTTT-TTG-GGCTGC------TTATCAGCTCCGGTG----A--ATCT---------CAGTAATCTTAGT--GTCGT-CAGCAGCATTATCGGT-TTTTCCCTGAATGAAAT------ATTTACACAACATCTTGGGAAAATTGTGTAATTTACTAAAAATGT--GGCGCGTGTGGCGATAAGAGAT------------T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
AATGAATAAGCTGCTGATTCTGGCCCTTTGCCTGGGCGTGGTCTGCGGAGGTAGTGAAATTTT-CCG-AACT----------CAAATAATCCTGAAAATTGCAAA------TGAG--GTGTAAATAGTGCT-------CTC--------------------------------------------TGGCTCCTGTGGATGTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
AATGAACAAGCTGCTGATTTTGGCCCTTTGCCTGGGCGTGGTCTGTGCAGGTAGTGAAATT-T-GTA-AAAT----------CAAATATTCCTGAAAATTACAAA------CAGG--ATGTGAATAGTGCT-------GCC--------------------------------------------TAGATCCTGTTGATAAGGTT-----------C----------------------------TAGTTTT-TTGAGGCTTT------CTATCGGCT-----------------------------------GCGT--GTCGT-CAACAGCTCT--CGGG-TTTTTCCTCAATGAAAT------ATTTACACAATATTATGGGAAAGTTGTGTAATTTTCTGAGAATGC--GACGCGTGTGCCGATAAGAGAT------------T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
AATGAATAAGCTGCTGATTTTGGCCCTCTGTCTGGGTGTGGTCTGTGGAGGTATTGAAATTTT-CCT-CAAT----------TGAAAGCTCCTTAAAAATGCAAA------CAATATATGTTAAGAGTGTT-------TTT--------------------------------------------GAAATCCTGCGAATCTGGCA-----------A----------------------------AAGTTTT-TTGAGGCTGC------TTATCAGCTGC---T--TA-TC---TGCTGC-TTCC--------GAGT--GTCGT-CAGCGACTTT--TGGG-TTTTTCCTGAATGAAAT------TTTTACACAACACCTTGGG-AAATTGTGTAATTTTCTGAGAATAT--AGCGCGTGCAGCGATAAGAGAT------------T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
GGGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT---GAAAT-------------------------CT-TCTTGCGTA--CGTT-------------------------------------------------------------------A---ACT---AATACATTTT----CCTCTTTTTA-TCATTACAGATTTCCAACAAAGGTAATTTTAATT-TGA------AGTG-CCTCA---------TT-----TAATATACATTCTAASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...AT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT---GAAAT-------------------------CT-TCTTGCGTA--CGTT-------------------------------------------------------------------........................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTGCGTA--CGTT-------------------------------------------------------------------A---ACT---AATA..........................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATTTTAATT-TGA------AGTG-CCTCA---------TT-----...............2511.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-------------------------CT-TCTTGCGTA--CGTT-------------------------------------------------------------------A---AC..................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAT-------------------------CT-TCTTGCGTA--CGTT-------------------------------------------------------------------A---ACT---AA............................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
droSim2
AATGAATAAGCTGCTGGTTTTGGCCCTTTGCCTGGGTGTGGTCTGTGGAGGTAGTGCACTGTTCCCA-ATAT----------CTGCTAGTCCAGAAAATTACACC------TAAG--ATGTAAACTGTGCC-------GGC--------------------------------------------TTGGTCCTGGCGATCTCATC-----------C----------------------------AAGTGTT-TTGAGGCTGC------CTATCAGCACTTGTG----G--ATC----------A--------GAGT--GTCGT-CAGTGGCACT--TGGG-TTTTTCCTGAATGAAAT------ATTTACACAACACCCTGGG-AAATTGTGTAATTT---------AT--GGCGCGTGTGGCGATAAGAGAT------------T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...........................TTGCCTGGGTGTGGTCTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000000000100000
......................GCCCTTTGCCTGGGTGTGGTCTGTGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000000100000
.........................CTTTGCCTGGGTGTGGTCTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
droSec2
AATGAATAAGCTGCTGGTTTTGGCCCTTTGCCTGGGTGTGGTCTGTGGAGGTAGTGCAATA----------T----------CTGCTAGTCCAGAAAATTACACC------TAAG--ATGTAAACTCTGC--------------------------------------------------------CGGTCCTGGCGATCTCATC-----------C----------------------------AAGTGTT-TTGAGGCTGC------CTATCAGTACTTGTG----G--ATC----------A--------TAGT--GTCGT-CAGTGGCACT--TGGG-TTTTTCCTGAATGAAAT------ATTTACACTGCACCCTGGG-AAATTGTGTAATTT---------AT--GGCGCGTGTGACGATAAGAGAT------------T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
........................CCTTTGCCTGGGTGTGGTCTGTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
....................TGGCCCTTTGCCTGGGTGTGGTCTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010001
........AGCTGCTGGTTTTGGCCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1830.3310010
droYak3
AATGAATAAGCTGCTGGTTTTGGCCCTTTGCCTGGGTGTGGTCTGTGGAGGTAGTGCACTGTT-CCA-AAAT----------CAACTTTTCCCGAAAATTACACC------TAAG--ATGTAACCAGTGCC-------GGC--------------------------------------------TTGGTCCTGTCGATCTGATC-----------C----------------------------AAGTTTT-TTGAGGCTGC------CTATCAGTGCTTGTG----G--ATC----------A--------GTGA--GTCGT-CAGTGGCACT--TGGT-TTTTTCCTGAATGAAAT------ATTTACACAACAACCCGGG-AAATTGTGTAATTT---------AT--GGCGCGTGTGGCGATAGAAGAT------------T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...................TTGGCCCTTTGCCTGGGTGTGGTCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
...............................CTGGGTGTGGTCTGTGGAGGTAGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
...........TGCTGGTTTTGGCCCTTTGCCTGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000
........................CCTTTGCCTGGGTGTGGTCTGTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010000000
.......................................................................................................................................................................................................................................................................................................................................................................................CAACCCGGG-AAATTGTGTAA...................................................................................................................................................................................................................................................................................................2011.00100100000000
.........................CTTTGCCTGGGTGTGGTCTGTGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010000000
.......................CCCTTTGCCTGGGTGTGGTCTGTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000
......................GCCCTTTGCCTGGGTGTGGTCTGTGGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100000000
..................TTTGGCCCTTTGCCTGGGTGTGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000
.....ATAAGCTGCTGGTTTTGGCCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000
droEre2
AATGAATAAGCTGCTGGTCTTGGCCCTTTGCCTGGGTGTGGTCTGTGGAGGTAGTGCACTGTT-CCG-AAAT----------AAGCTAATCCAGAGAATTGCACC------TAAG--ATGTAGC----------------------------------------------------------------------------TGATC-----------C----------------------------AA-TTTT-TCGAGACTGC------CTATCAGTGCA-GTG----G--ATC----------G--------CAGT--GTCGT-CAGTGGCACT--T-GT-TTTTCCCTGAATGAAAT------ATTTACACAACACCCTG---AAATTGTGTAATTT---------AT--GGCGCGTGTGGCGATAGGAGAT------------T--------------------------------------------GTA--AACC-------------------------------------------------------------------G---ACC-GAAATACACTAT----TTTCCCTTG--------------------------------------------------------------------------------------ASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
........AGCTGCTGGTCTTGGCCCTTTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000000
.......AAGCTGCTGGTCTTGGCCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000
...........TGCTGGTCTTGGCCCTTTGCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
..........................TTTGCCTGGGTGTGGTCTGTGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100

Generated: 06/08/2015 at 03:19 PM