dpe_849

CDS [Dper\GL21114-cds]; exon [dper_GLEANR_3033:2]; Antisense to CDS [Dper\GL21197-cds]; Antisense to exon [dper_GLEANR_3123:2]; Antisense to intron [Dper\GL21197-in]; intron [Dper\GL21114-in]

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- GTTTCTCTTCTGCCGCTGCCGCGTCGATGCCGGCGGCTCGCTGGATCCCGGTGTTTTCCTCGTGGGATTGACTGTCGTGAAATGGTAAGCGAAACGATATGGGGAAGCTGTCTCTTTATTGATGGTACATTTATCGTATGCATTCTCTGTTCTTAAGGCTAAGTAACGATATATTTAAGAGAAACTAGAGATATAAAAAGGGATGCAGCGATGCAGCGCGCTGTGACGAACCTTCTTAAGGTTCGTTACAA ***************************************************..........((((.((..((.((..(((((.....((...(((((.(((((.....))))).))))).))...)))))..))))..)).))))..****************************************************************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M042 female body	V057 head	V111 male body	M021 embryo
..........................................................................................................................TGGTACATTTATCGTATGCATTCTCTG......................................................................................................	27	0	2	3.00	6	6	0	0	0
.....................................................TTTTCCTCGTGGGATTGACTGTCG..............................................................................................................................................................................	24	0	1	2.00	2	2	0	0	0
.........................................................................................................................................................TAAGGCTAAGTAACGATATATT............................................................................	22	0	3	1.00	3	3	0	0	0
......................................................TTTCCTCGTGGGATTGACTGTCGT.............................................................................................................................................................................	24	0	1	1.00	1	1	0	0	0
.....................................................TTTTCCTCGTGGGATTGACTGTC...............................................................................................................................................................................	23	0	1	1.00	1	1	0	0	0
.............................................................................................................................TACATTTATCGTATGCATTCTCTG......................................................................................................	24	0	2	1.00	2	2	0	0	0
.....................................................TTTTCCTCGTGGGATTGACTGTCGT.............................................................................................................................................................................	25	0	1	1.00	1	1	0	0	0
.......................................................................................................................................................CTTAAGGCTAAGTAACGATATATT............................................................................	24	0	3	0.67	2	2	0	0	0
.........................................................................................................................................................TAAGGCTAAGTAACGATATATTTAAG........................................................................	26	0	3	0.67	2	2	0	0	0
..................................................................................TGGTAAGAGAAAGGATATGGG....................................................................................................................................................	21	2	2	0.50	1	0	1	0	0
..........................................................................................................................TGGTACATTTATCGTATGCATTCTCTT......................................................................................................	27	1	2	0.50	1	1	0	0	0
..................................................................................................................................................................................................................AAGCAGCGCGCTGTGACGAGCC...................	22	2	2	0.50	1	0	1	0	0
.............................................................................TGAAATGGTAAGCGAAACGATATG......................................................................................................................................................	24	0	2	0.50	1	0	0	1	0
.............................................................................................................................TACATTTATCGTATGCATTCTCTT......................................................................................................	24	1	2	0.50	1	1	0	0	0
..........................................................................................................................TGGTACATTTATCGTATG...............................................................................................................	18	0	3	0.33	1	1	0	0	0
...........................................................................................................................................................AGGCTAAGTAACGATATATT............................................................................	20	0	3	0.33	1	1	0	0	0
..................................................................................................................................................................................................................ACGCAGCGCGCTGTGAGGAGC....................	21	3	4	0.25	1	0	1	0	0
..................................................................................TGGTAAGTGAAAGGCTATGGG....................................................................................................................................................	21	3	4	0.25	1	0	1	0	0
.TTTCTCTTCTGCCGCTGC........................................................................................................................................................................................................................................	18	0	14	0.07	1	1	0	0	0
............................................................................................................................................CATTCTATGTACTAAAGGC............................................................................................	19	3	14	0.07	1	0	0	0	1

#######################################################################------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CAAAGAGAAGACGGCGACGGCGCAGCTACGGCCGCCGAGCGACCTAGGGCCACAAAAGGAGCACCCTAACTGACAGCACTTTACCATTCGCTTTGCTATACCCCTTCGACAGAGAAATAACTACCATGTAAATAGCATACGTAAGAGACAAGAATTCCGATTCATTGCTATATAAATTCTCTTTGATCTCTATATTTTTCCCTACGTCGCTACGTCGCGCGACACTGCTTGGAAGAATTCCAAGCAATGTT ****************************************************************************************************..........((((.((..((.((..(((((.....((...(((((.(((((.....))))).))))).))...)))))..))))..)).))))..***************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	V057 head	M042 female body
..............................................................................................................................................................................................................TCGTTGCGTCGCGCGACACTAC.......................	22	3	2	0.50	1	1	0
..........................TACGGCCGCCGAGCGACCTA.............................................................................................................................................................................................................	20	0	20	0.05	1	0	1

Species	Coordinate	ID	Alignment
droPer2	scaffold_16:750011-750261 -	dpe_849	GTTTCTCTTCTGCCGCTGCCGCGTCGATGCCGGCGGCTCGCTGGATCCCGGTGTTTTCCTCGTGGGATTGACTGTCGTGAAATGGTAAGCGAAACGATATGGGGAAGCTGTCTCTTTATTGATGGTACATTTATCGTATGCATTCTCTGTTCTTAAGGCTAAGTAACGATATATTTAAGAGAAACTAGAGATATAAAAAG-GGATGCAGCGATGCAGCGCGCTGTGACGAACCTTCTTAAGGTTCGTTACAA
dp5	4_group4:6142893-6143144 +		GTTTCTCTTCTGCCGCTGCCGCGTCGATGCCGGCGGCTCGCTGGATCCCGGTGTTTTCCTCGTGGGATTGACTGTCGTGAAATGGTAAGCGAAACGATATGGGGAAGCTGTCTCTTTATTGATGGTACATTTATCGTATGCATTCTCTGTTCTTAAGGCTAAGTAACGATATATTTAAGAGAAACTAGAGATATAAAAAGGGGATGCAGCGATGCAGCGCGCTGTGACGAACCTTCTTAAGGTTCGTTACAA

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droPer2

GTTTCTCTTCTGCCGCTGCCGCGTCGATGCCGGCGGCTCGCTGGATCCCGGTGTTTTCCTCGTGGGATTGACTGTCGTGAAATGGTAAGCGAAACGATATGGGGAAGCTGTCTCTTTATTGATGGTACATTTATCGTATGCATTCTCTGTTCTTAAGGCTAAGTAACGATATATTTAAGAGAAACTAGAGATATAAAAAG-GGATGCAGCGATGCAGCGCGCTGTGACGAACCTTCTTAAGGTTCGTTACAA	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
..........................................................................................................................TGGTACATTTATCGTATGCATTCTCTG.......................................................................................................	27	2	3.00	6	0	6	0	0	0	0
.....................................................TTTTCCTCGTGGGATTGACTGTCG...............................................................................................................................................................................	24	1	2.00	2	0	2	0	0	0	0
.........................................................................................................................................................TAAGGCTAAGTAACGATATATT.............................................................................	22	3	1.00	3	0	3	0	0	0	0
......................................................TTTCCTCGTGGGATTGACTGTCGT..............................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0
.....................................................TTTTCCTCGTGGGATTGACTGTC................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0
.............................................................................................................................TACATTTATCGTATGCATTCTCTG.......................................................................................................	24	2	1.00	2	0	2	0	0	0	0
.....................................................TTTTCCTCGTGGGATTGACTGTCGT..............................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0
.......................................................................................................................................................CTTAAGGCTAAGTAACGATATATT.............................................................................	24	3	0.67	2	0	2	0	0	0	0
.........................................................................................................................................................TAAGGCTAAGTAACGATATATTTAAG.........................................................................	26	3	0.67	2	0	2	0	0	0	0
..........................................................................................................................TGGTACATTTATCGTATGCATTCTCTT.......................................................................................................	27	2	0.50	1	0	1	0	0	0	0
.............................................................................TGAAATGGTAAGCGAAACGATATG.......................................................................................................................................................	24	2	0.50	1	0	0	0	0	0	1
.............................................................................................................................TACATTTATCGTATGCATTCTCTT.......................................................................................................	24	2	0.50	1	0	1	0	0	0	0
..........................................................................................................................TGGTACATTTATCGTATG................................................................................................................	18	3	0.33	1	0	1	0	0	0	0
...........................................................................................................................................................AGGCTAAGTAACGATATATT.............................................................................	20	3	0.33	1	0	1	0	0	0	0
.TTTCTCTTCTGCCGCTGC.........................................................................................................................................................................................................................................	18	14	0.07	1	0	1	0	0	0	0

dp5

GTTTCTCTTCTGCCGCTGCCGCGTCGATGCCGGCGGCTCGCTGGATCCCGGTGTTTTCCTCGTGGGATTGACTGTCGTGAAATGGTAAGCGAAACGATATGGGGAAGCTGTCTCTTTATTGATGGTACATTTATCGTATGCATTCTCTGTTCTTAAGGCTAAGTAACGATATATTTAAGAGAAACTAGAGATATAAAAAGGGGATGCAGCGATGCAGCGCGCTGTGACGAACCTTCTTAAGGTTCGTTACAA	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
.....................................................................................................................................TCGTATGCATTCTCTGTTCTTAAGGC.............................................................................................	26	2	62.00	124	0	53	0	0	0	1	0	39	31	0
........................................................................................................................................TATGCATTCTCTGTTCTTAAGGC.............................................................................................	23	2	44.00	88	0	22	0	0	0	0	0	42	24	0
..........................................................................................................................................TGCATTCTCTGTTCTTAAGGCTAAG.........................................................................................	25	2	28.00	56	0	26	0	0	0	0	0	23	7	0
...................................................................................................................................TATCGTATGCATTCTCTGTTCTTAAGGC.............................................................................................	28	2	27.00	54	0	40	1	0	0	0	0	3	10	0
.............................................................................................................................TACATTTATCGTATGCATTCTCTGT......................................................................................................	25	3	14.67	44	0	16	0	0	0	0	0	17	11	0
...................................................................................................................................TATCGTATGCATTCTCTGTTCT...................................................................................................	22	3	13.67	41	0	15	0	0	0	0	0	21	5	0
.........................................................................................................................................................TAAGGCTAAGTAACGATATATT.............................................................................	22	3	11.33	34	0	25	0	0	0	1	1	5	2	0
..........................................................................................................................TGGTACATTTATCGTATGCATTCTCTG.......................................................................................................	27	3	8.33	25	0	10	0	0	0	0	0	15	0	0
..................................................................................................................................TTATCGTATGCATTCTCTGTTCT...................................................................................................	23	3	8.00	24	0	21	0	0	0	0	0	3	0	0
.............................................................................................................................TACATTTATCGTATGCATTCTCTGTTC....................................................................................................	27	3	7.33	22	0	4	0	0	0	0	1	14	3	0
..........................................................................................................................................TGCATTCTCTGTTCTTAAGGC.............................................................................................	21	2	7.00	14	0	4	0	0	0	0	0	9	1	0
.......................................................................................................................................GTATGCATTCTCTGTTCTTAAGGC.............................................................................................	24	2	6.00	12	0	6	0	0	0	0	0	2	4	0
.................................................................................................................................TTTATCGTATGCATTCTCTGTTCT...................................................................................................	24	3	6.00	18	0	8	0	0	0	0	0	7	3	0
...............................................................................................................................................TCTCTGTTCTTAAGGCTAAGTAACGA...................................................................................	26	3	5.67	17	0	12	0	0	0	0	0	2	3	0
.........................................................................................................................................................TAAGGCTAAGTAACGATATATTTA...........................................................................	24	3	5.00	15	0	10	0	0	0	0	1	4	0	0
..............................................................................................................................................TTCTCTGTTCTTAAGGCTAAGTAACGA...................................................................................	27	3	5.00	15	0	14	0	0	0	0	0	1	0	0
...................................................................................................................................TATCGTATGCATTCTCTGTTCTTAAGG..............................................................................................	27	2	5.00	10	0	3	0	0	0	0	0	4	3	0
.....................................................................................................................................TCGTATGCATTCTCTGTTCTTAAGG..............................................................................................	25	2	4.50	9	0	3	0	0	0	0	0	4	2	0
....................................................................................................................................ATCGTATGCATTCTCTGTTCTTAAGGC.............................................................................................	27	2	4.50	9	0	5	0	0	0	0	0	4	0	0
...................................................................................................................................TATCGTATGCATTCTCTGTTC....................................................................................................	21	3	4.33	13	0	4	0	0	0	0	0	8	1	0
......................................................................................................................................CGTATGCATTCTCTGTTCTTAAGGC.............................................................................................	25	2	4.00	8	0	8	0	0	0	0	0	0	0	0
............................................................................................AACGATATGGGGAAGCTGTCTCTT........................................................................................................................................	24	1	4.00	4	0	4	0	0	0	0	0	0	0	0
.............................................................................................................................TACATTTATCGTATGCATTCTCTG.......................................................................................................	24	3	4.00	12	0	3	0	0	0	0	0	7	2	0
..................................................................................................................................TTATCGTATGCATTCTCTGTTCTTAAGGC.............................................................................................	29	2	4.00	8	0	8	0	0	0	0	0	0	0	0
.................................................................................................................................................TCTGTTCTTAAGGCTAAGTAACGATA.................................................................................	26	3	3.67	11	0	6	0	0	0	0	0	3	2	0
..........................................................................................................................TGGTACATTTATCGTATGCATTCTCTGT......................................................................................................	28	3	3.67	11	0	6	0	0	0	0	0	5	0	0
...................................................................................................................................TATCGTATGCATTCTCTGTT.....................................................................................................	20	3	3.33	10	0	6	0	0	0	0	0	2	2	0
........................................................................................................................................................TTAAGGCTAAGTAACGATATATT.............................................................................	23	3	3.33	10	0	6	0	0	0	0	0	3	1	0
..........................................................................................................................................TGCATTCTCTGTTCTTAAGGCTAAGT........................................................................................	26	2	3.00	6	0	4	0	0	0	0	0	2	0	0
.............................................................................................................................TACATTTATCGTATGCATTCTCTGTTCT...................................................................................................	28	3	3.00	9	0	3	0	0	0	0	0	6	0	0
...................................................................................................................................TATCGTATGCATTCTCTGTTCTTAA................................................................................................	25	3	2.67	8	0	2	0	0	0	0	1	3	2	0
.....................................................................................................................................................TTCTTAAGGCTAAGTAACGATATATT.............................................................................	26	3	2.67	8	0	3	0	0	0	0	0	2	3	0
................................................................................................................................................CTCTGTTCTTAAGGCTAAGTAACGA...................................................................................	25	3	2.67	8	0	5	0	0	0	0	0	3	0	0
......................................................................................................................................................TCTTAAGGCTAAGTAACGATATATT.............................................................................	25	3	2.67	8	0	5	0	0	0	0	0	3	0	0
.....................................................................................................................................TCGTATGCATTCTCTGTTCT...................................................................................................	20	3	2.67	8	0	6	0	0	0	0	0	2	0	0
.....................................................................................................................................TCGTATGCATTCTCTGTTCTTAAGGT.............................................................................................	26	2	2.50	5	0	0	0	0	0	0	0	5	0	0
.............................................................................................................................TACATTTATCGTATGCATTCTCTGTT.....................................................................................................	26	3	2.33	7	0	1	0	0	0	0	0	6	0	0
..............................................................................................................................ACATTTATCGTATGCATTCTCTGT......................................................................................................	24	3	2.33	7	0	1	0	0	0	0	0	5	1	0
...........................................................................................................................................GCATTCTCTGTTCTTAAGGCTAAG.........................................................................................	24	2	2.00	4	0	4	0	0	0	0	0	0	0	0
........................................................................................................................................TATGCATTCTCTGTTCTTAAGGCTAAG.........................................................................................	27	2	2.00	4	0	2	0	0	0	0	0	0	2	0
..........................................................................................................................TGGTACATTTATCGTATGCATTCTC.........................................................................................................	25	3	2.00	6	0	5	0	0	0	0	0	1	0	0
........................................................................................................................................TATGCATTCTCTGTTCTTAAGGCTAAGT........................................................................................	28	2	2.00	4	0	4	0	0	0	0	0	0	0	0
.................................................................................................................................TTTATCGTATGCATTCTCTGTTCA...................................................................................................	24	3	2.00	6	0	6	0	0	0	0	0	0	0	0
...................................................................................................................................TATCGTATGCATTCTCTGTTCA...................................................................................................	22	3	2.00	6	0	6	0	0	0	0	0	0	0	0
.....................................................................................................................................TCGTATGCATTCTCTGTTCTTAAGGCT............................................................................................	27	2	2.00	4	0	0	0	0	0	0	0	4	0	0
..................................................................................................................................TTATCGTATGCATTCTCTGTTC....................................................................................................	22	3	1.67	5	0	4	0	1	0	0	0	0	0	0
....................................................................................................................................ATCGTATGCATTCTCTGTTCT...................................................................................................	21	3	1.67	5	0	4	0	0	0	0	0	1	0	0
..............................................................................................................................ACATTTATCGTATGCATTCTCTGTTC....................................................................................................	26	3	1.67	5	0	3	0	0	0	0	0	2	0	0
.................................................................................................................................................TCTGTTCTTAAGGCTAAGTAACGA...................................................................................	24	3	1.67	5	0	4	0	0	0	0	0	1	0	0
.........................................................................................................................................................TAAGGCTAAGTAACGATATATTT............................................................................	23	3	1.67	5	0	2	0	0	0	0	0	0	3	0
.........................................................................................................................................ATGCATTCTCTGTTCTTAAGGC.............................................................................................	22	2	1.50	3	0	2	0	0	0	0	0	1	0	0
..................................................................................................................................TTATCGTATGCATTCTCTGTTCTTAAGG..............................................................................................	28	2	1.50	3	0	3	0	0	0	0	0	0	0	0
.........................................................................................................................................ATGCATTCTCTGTTCTTAAGGCTAAGT........................................................................................	27	2	1.50	3	0	0	0	0	0	0	0	3	0	0
............................................................................................................................................CATTCTCTGTTCTTAAGGCTAAG.........................................................................................	23	2	1.50	3	0	0	0	0	0	0	0	3	0	0
...............................................................................................................................CATTTATCGTATGCATTCTCTGTTC....................................................................................................	25	3	1.33	4	0	1	0	0	0	0	0	3	0	0
..............................................................................................................................................TTCTCTGTTCTTAAGGCTAAGTA.......................................................................................	23	3	1.33	4	0	4	0	0	0	0	0	0	0	0
.........................................................................................................................................................TAAGGCTAAGTAACGATATAT..............................................................................	21	3	1.33	4	0	3	0	0	0	0	0	0	1	0
.................................................................................................................................................TCTGTTCTTAAGGCTAAGTAA......................................................................................	21	3	1.33	4	0	2	0	0	0	0	0	2	0	0
................................................................................................................................ATTTATCGTATGCATTCTCTGTTCT...................................................................................................	25	3	1.33	4	0	2	0	0	0	0	0	1	1	0
.................................................................................................................................................TCTGTTCTTAAGGCTAAGTAAC.....................................................................................	22	3	1.33	4	0	0	0	0	0	0	0	4	0	0
.........................................................................................................................................................TAAGGCTAAGTAACGATATATTTAA..........................................................................	25	3	1.33	4	0	1	0	0	0	0	1	1	1	0
...................................................................................................................................TATCGTATGCATTCTCTGTTCTTA.................................................................................................	24	3	1.33	4	0	2	0	0	0	0	0	1	1	0
..............................................................................................................TCTCTTTATTGATGGTACATTTATCGT...................................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0
........................................................................................GCGAAACGATATGGGGAAGCTGT.............................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............................................CCCGGTGTTTTCCTCGTGGGATTGA.....................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	1	0	0	0
.....TCTTCTGCCGCTGCCGCGTCGATGC..............................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................ATAAAAAGGGGATGCAGCGATGCAG...................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
............................................................................................AACGATATGGGGAAGCTGTCTCTTTAT.....................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................TATCGTATGCATTCTCTGTTCTT..................................................................................................	23	3	1.00	3	0	3	0	0	0	0	0	0	0	0
......................................................................................................................................................................CGATATATTTAAGAGAAACTAGAGATA...........................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................ATTTATCGTATGCATTCTCTGTTCA...................................................................................................	25	3	1.00	3	0	2	0	0	0	0	1	0	0	0
..................................................GTGTTTTCCTCGTGGGATTGACT...................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	1	0	0
..................................................................................................................................TTATCGTATGCATTCTCTGTTCTTAA................................................................................................	26	3	1.00	3	0	0	0	0	0	0	0	1	2	0
.......................................................................................................................................................CTTAAGGCTAAGTAACGATATATT.............................................................................	24	3	1.00	3	0	1	0	0	0	0	0	2	0	0
..........................................................................................................................................TGCATTCTCTGTTCTTAAGG..............................................................................................	20	2	1.00	2	0	2	0	0	0	0	0	0	0	0
.........................................................................................................................................................TAAGGCTAAGTAACGATATATTTAAG.........................................................................	26	3	1.00	3	0	0	0	0	0	0	1	2	0	0
..................................................................................................................................TTATCGTATGCATTCTCTGTTCA...................................................................................................	23	3	1.00	3	0	3	0	0	0	0	0	0	0	0
...................................................................................................................................TATCGTATGCATTCTCTGTTCTTAAG...............................................................................................	26	2	1.00	2	0	0	0	0	0	0	0	0	2	0
............................................................CGTGGGATTGACTGTCGTGA............................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................GAAACGATATGGGGAAGCTGTCTCT.........................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................TCTTAAGGCTAAGTAACGATT.................................................................................	21	3	0.67	2	0	0	0	0	0	0	0	2	0	0
................................................................................................................................................CTCTGTTCTTAAGGCTAAGTAACG....................................................................................	24	3	0.67	2	0	2	0	0	0	0	0	0	0	0
.....................................................................................................................................TCGTATGCATTCTCTGTTC....................................................................................................	19	3	0.67	2	0	0	0	0	0	0	0	1	1	0
..................................................................................................................................TTATCGTATGCATTCTCTGTTT....................................................................................................	22	3	0.67	2	0	0	0	0	0	0	0	2	0	0
.............................................................................................................................TACATTTATCGTATGCATTCTCT........................................................................................................	23	3	0.67	2	0	1	0	0	0	0	0	1	0	0
................................................................................................................................................CTCTGTTCTTAAGGCTAAGTA.......................................................................................	21	3	0.67	2	0	2	0	0	0	0	0	0	0	0
...................................................................................................................................TATCGTATGCATTCTCTGTTCTTAAAA..............................................................................................	27	3	0.67	2	0	0	0	0	0	0	0	2	0	0
.........................................................................................................................................................TAAGGCTAAGTAACGATATA...............................................................................	20	3	0.67	2	0	2	0	0	0	0	0	0	0	0
...............................................................................................................................CATTTATCGTATGCATTCTCTGTTCT...................................................................................................	26	3	0.67	2	0	1	0	0	0	0	0	1	0	0
.............................................................................................................................TACATTTATCGTATGCATTCTCTGTTCA...................................................................................................	28	3	0.67	2	0	2	0	0	0	0	0	0	0	0
..................................................................................................................................TTATCGTATGCATTCTCTGTTCTTA.................................................................................................	25	3	0.67	2	0	2	0	0	0	0	0	0	0	0
..............................................................................................................................................TTCTCTGTTCTTAAGGCTAAGTAACG....................................................................................	26	3	0.67	2	0	0	0	0	0	0	0	2	0	0
..........................................................................................................................................................AAGGCTAAGTAACGATATATT.............................................................................	21	3	0.67	2	0	2	0	0	0	0	0	0	0	0
........................................................................................................................................TATGCATTCTCTGTTCTTAAGG..............................................................................................	22	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................TGCATTCTCTGTTCTTAAGGCA............................................................................................	22	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.............................................................................TGAAATGGTAAGCGAAACGATA.........................................................................................................................................................	22	2	0.50	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................CGTATGCATTCTCTGTTCTTAAGGCA............................................................................................	26	2	0.50	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................CGTATGCATTCTCTGTTCTTAAGGCT............................................................................................	26	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................TGCATTCTCTGTTCTTAAGGCTAAGTAA......................................................................................	28	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.....TCTTCTGCCGCTGCCGCGT....................................................................................................................................................................................................................................	19	2	0.50	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................ATCGTATGCATTCTCTGTTCTTAAGG..............................................................................................	26	2	0.50	1	0	0	0	0	0	0	0	1	0	0
.......................................................................................................................................GTATGCATTCTCTGTTCTTAAGG..............................................................................................	23	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..........................................................................TCGTGAAATGGTAAGCGAAACGATA.........................................................................................................................................................	25	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................TGCATTCTCTGTTCTTAAGGCT............................................................................................	22	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................TCGTATGCATTCTCTGTTCTTAAGGCA............................................................................................	27	2	0.50	1	0	0	0	0	0	0	0	0	1	0
........................................................................................................................................TATGCATTCTCTGTTCTTAAGGT.............................................................................................	23	2	0.50	1	0	0	0	0	0	0	0	0	1	0
...........................................................................................................................................................AGGCTAAGTAACGATATATTT............................................................................	21	3	0.33	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................TCTGTTCTTAAGGCTAAGTAACGAT..................................................................................	25	3	0.33	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................TCGTATGCATTCTCTGTTT....................................................................................................	19	3	0.33	1	0	0	0	0	0	0	0	1	0	0
......................................................................................................................................................TCTTAAGGCTAAGTAACGATATAT..............................................................................	24	3	0.33	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................TCTTAAGGCTAAGTAACGATATATTTA...........................................................................	27	3	0.33	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................CTTAAGGCTAAGTAACGATATAA..............................................................................	23	3	0.33	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................ATCGTATGCATTCTCTGTTC....................................................................................................	20	3	0.33	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................TAAGGCTAAGTAACGATATATTG............................................................................	23	3	0.33	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................GTATGCATTCTCTGTTCTTAA................................................................................................	21	3	0.33	1	0	0	0	0	0	0	0	1	0	0
....................................................................................................................................ATCGTATGCATTCTCTGTTCTT..................................................................................................	22	3	0.33	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................TCGTATGCATTCTCTGTTCTTA.................................................................................................	22	3	0.33	1	0	0	0	0	0	0	0	1	0	0
..................................................................................................................................................CTGTTCTTAAGGCTAAGTAACGA...................................................................................	23	3	0.33	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................TCGTATGCATTCTCTGTTCTTAAA...............................................................................................	24	3	0.33	1	0	0	0	0	0	0	0	0	1	0
..............................................................................................................................................TTCTCTGTTCTTAAGGCTAAGTAA......................................................................................	24	3	0.33	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................ATCGTATGCATTCTCTGTT.....................................................................................................	19	3	0.33	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................CATTTATCGTATGCATTCTCTGT......................................................................................................	23	3	0.33	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................TTTATCGTATGCATTCTCTGTTT....................................................................................................	23	3	0.33	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................CGTATGCATTCTCTGTTCT...................................................................................................	19	3	0.33	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................TCTCTGTTCTTAAGGCTAAGT........................................................................................	21	3	0.33	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................TTTATCGTATGCATTCTCTGTTCTTA.................................................................................................	26	3	0.33	1	0	0	0	0	0	0	0	1	0	0
.................................................................................................................................TTTATCGTATGCATTCTCTGTA.....................................................................................................	22	3	0.33	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................TGGTACATTTATCGTATGCATTCTCT........................................................................................................	26	3	0.33	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................TACATTTATCGTATGCATTCTCTGTTCTT..................................................................................................	29	3	0.33	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................ATTTATCGTATGCATTCTCTGT......................................................................................................	22	3	0.33	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................TTCTTAAGGCTAAGTAACGATATAT..............................................................................	25	3	0.33	1	0	0	0	0	0	0	0	0	1	0
...............................................................................................................................................TCTCTGTTCTTAAGGCTAAG.........................................................................................	20	3	0.33	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................TACATTTATCGTATGCATTCTCTGTA.....................................................................................................	26	3	0.33	1	0	0	0	0	0	0	0	1	0	0
........................................................................................................................................................TTAAGGCTAAGTAACGATA.................................................................................	19	3	0.33	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................ATTTATCGTATGCATTCTCTG.......................................................................................................	21	3	0.33	1	0	0	0	0	0	0	0	1	0	0
...............................................................................................................................CATTTATCGTATGCATTCTCTGTTCTT..................................................................................................	27	3	0.33	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................TTATCGTATGCATTCTCTGTTCTT..................................................................................................	24	3	0.33	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................TTATCGTATGCATTCTCTGTT.....................................................................................................	21	3	0.33	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................AAGGCTAAGTAACGATATATTT............................................................................	22	3	0.33	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................ATTTATCGTATGCATTCTCTGTT.....................................................................................................	23	3	0.33	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................TCTCTGTTCTTAAGGCTAAGTA.......................................................................................	22	3	0.33	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................TCTCTGTTCTTAAGGCTAAGTAAC.....................................................................................	24	3	0.33	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................TATCGTATGCATTCTCTGT......................................................................................................	19	3	0.33	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................ACATTTATCGTATGCATTCTCTGTTCT...................................................................................................	27	3	0.33	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................TCGTATGCATTCTCTGTTCTT..................................................................................................	21	3	0.33	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................TCTTAAGGCTAAGTAACGATA.................................................................................	21	3	0.33	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................TTTATCGTATGCATTCTCTGTTC....................................................................................................	23	3	0.33	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................CTTAAGGCTAAGTAACGATATATTT............................................................................	25	3	0.33	1	0	0	0	0	0	0	0	0	1	0
.............................................................................................................................TACATTTATCGTATGCATTCTCTGG......................................................................................................	25	3	0.33	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................TCGTATGCATTCTCTGTT.....................................................................................................	18	3	0.33	1	0	0	0	0	0	0	0	1	0	0
..........................................................................................................................TGGTACATTTATCGTATGCATTC...........................................................................................................	23	3	0.33	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................TTCTCTGTTCTTAAGGCTAAGTAACGAT..................................................................................	28	3	0.33	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................TAAGGCTAAGTAACGATA.................................................................................	18	3	0.33	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................TTCTTAAGGCTAAGTAACGATATA...............................................................................	24	3	0.33	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................TCTGTTCTTAAGGCTAAGTAACGATGA................................................................................	27	3	0.33	1	0	0	0	0	0	0	0	1	0	0
..................................................................................................................................................CTGTTCTTAAGGCTAAGTAACGATA.................................................................................	25	3	0.33	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................TCTCTGTTCTTAAGG..............................................................................................	15	4	0.25	1	0	0	0	0	0	0	0	1	0	0
...........................TGCCGGCGGCTCGCTGGATCCCG..........................................................................................................................................................................................................	23	20	0.15	3	0	3	0	0	0	0	0	0	0	0
........................CGATGCCGGCGGCTCGCTGGAT..............................................................................................................................................................................................................	22	20	0.10	2	0	2	0	0	0	0	0	0	0	0
GTTTCTCTTCTGCCGCTGC.........................................................................................................................................................................................................................................	19	10	0.10	1	0	1	0	0	0	0	0	0	0	0
..............................CGGCGGCTCGCTGGATCCC...........................................................................................................................................................................................................	19	20	0.05	1	0	1	0	0	0	0	0	0	0	0
............................GCCGGCGGCTCGCTGGATCCCG..........................................................................................................................................................................................................	22	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.......................TCGATGCCGGCGGCTCGCTGGATC.............................................................................................................................................................................................................	24	20	0.05	1	0	1	0	0	0	0	0	0	0	0
........................CGATGCCGGCGGCTCGCTG.................................................................................................................................................................................................................	19	20	0.05	1	0	1	0	0	0	0	0	0	0	0
....................GCGTCGATGCCGGCGGCTCG....................................................................................................................................................................................................................	20	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.......................TCGATGCCGGCGGCTCGCTGG................................................................................................................................................................................................................	21	20	0.05	1	0	1	0	0	0	0	0	0	0	0
......................GTCGATGCCGGCGGCTCGCTG.................................................................................................................................................................................................................	21	20	0.05	1	0	1	0	0	0	0	0	0	0	0
........................CGATGCCGGCGGCTCGCTGGA...............................................................................................................................................................................................................	21	20	0.05	1	0	1	0	0	0	0	0	0	0	0
....................GCGTCGATGCCGGCGGCTCGCTGGAT..............................................................................................................................................................................................................	26	20	0.05	1	0	1	0	0	0	0	0	0	0	0

dpe_849

scaffold_16:750061-750211 -

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-16.4	-16.3	-15.9