dpe_830

Name	Class	Family	Strand
DIVER2_I-int	LTR	Pao	-

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- AGTGGTCAACGCATTGGAGGAAGATCATTTTTACAAATGTTTGCGCGGAGGTACGCCTCGAGGTCAGACTCGAGGATTTGCTCATGGGGGCCGCCTAGAAGCAGCTGAGCATGAGTCAAAACATCTAAATCATCAGGATTTTCTGAAAGCGAGAGTAAAGGACGAGAGTTAACAATTGCCGTGATCTGAAAGATCAGCTCGTTCGCAGCTCGTTGAAGCTAAGCACAAATGGTCCAACTGAGCGGTATAGG ********************************************************************......((((((((((..(((.((......)).)))...)))))).))))............(((((....)))))......*************************************************************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M042 female body	V111 male body	V057 head	M021 embryo	V042 embryo
.....................................................CGCCTCTAGGTCAGAATCCA..................................................................................................................................................................................	20	3	1	1.00	1	1	0	0	0	0
...............................................................................................................................................................................................................CCTCGTTGAAGTTAAGAACAA.......................	21	3	3	1.00	3	0	2	1	0	0
.....................................TGTTTGCGCGGAGGTACGCCTCGAGG............................................................................................................................................................................................	26	0	1	1.00	1	1	0	0	0	0
....................................................................................................................................................................................................................................ATGGTCCAACTGAGCGGTCTG..	21	2	2	0.50	1	1	0	0	0	0
...............................................................................................TAGTAACAGCTGAGCATG..........................................................................................................................................	18	2	4	0.25	1	0	0	1	0	0
......................................................................CGAGGATTTGCTCATGGGGG.................................................................................................................................................................	20	0	20	0.10	2	0	0	0	2	0
......................................................................CGAGGATTTGCTCATGGGGGC................................................................................................................................................................	21	0	20	0.10	2	0	0	0	2	0
...............................................................................................................................................................................................................CCTCGTTGAAGTTAAGAACA........................	20	3	14	0.07	1	0	1	0	0	0
.....................................................................TCGAGGATTTGCTCATGGGGGCCGCC............................................................................................................................................................	26	0	20	0.05	1	1	0	0	0	0
.....................................................................TCGAGGATTTGCTCATGG....................................................................................................................................................................	18	0	20	0.05	1	1	0	0	0	0
....................................................................CTCGAGGATTTGCTCATGGG...................................................................................................................................................................	20	0	20	0.05	1	1	0	0	0	0
...........................................................................................................................................................CAAAGGACGAGACTCAACAA............................................................................	20	3	20	0.05	1	0	0	0	1	0
............................................................................TTTGCTCATGGGGGCCGCTT...........................................................................................................................................................	20	1	20	0.05	1	0	0	0	0	1
..................................................................................................................................CATCAGGATTTTCTGAAAGCGA...................................................................................................	22	0	20	0.05	1	1	0	0	0	0
.......................................................................................................................................................................................ATTTGCAAGATCAGGTCGT.................................................	19	3	20	0.05	1	0	0	0	0	1
..............................................................................................................................AAATCATCAGGATTTTCTGAAAG......................................................................................................	23	0	20	0.05	1	1	0	0	0	0
.......................................................................GAGGATTTGCTCATGGGGGCCGCC............................................................................................................................................................	24	0	20	0.05	1	1	0	0	0	0

TCACCAGTTGCGTAACCTCCTTCTAGTAAAAATGTTTACAAACGCGCCTCCATGCGGAGCTCCAGTCTGAGCTCCTAAACGAGTACCCCCGGCGGATCTTCGTCGACTCGTACTCAGTTTTGTAGATTTAGTAGTCCTAAAAGACTTTCGCTCTCATTTCCTGCTCTCAATTGTTAACGGCACTAGACTTTCTAGTCGAGCAAGCGTCGAGCAACTTCGATTCGTGTTTACCAGGTTGACTCGCCATATCC *************************************************************************************************......((((((((((..(((.((......)).)))...)))))).))))............(((((....)))))......********************************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M021 embryo	V057 head
...............................................................AGGCTGAGCTCCTAGACGA.........................................................................................................................................................................	19	2	8	0.38	3	3	0
.........................................................................................................................................................................................................AAGCGTTGAGCAACATCG................................	18	2	3	0.33	1	0	1
...............................................................AGGCTGAGCTCCTAGACG..........................................................................................................................................................................	18	2	12	0.08	1	1	0

Species	Coordinate	ID	Alignment
droPer2	scaffold_158:34726-34976 +	dpe_830	AGTGGTCAACGCATT---GGAGGAAGATCAT---TTTTACA------------------------------------------------------------------------AAT----------GTTTGCGCGGAGGTACGCCTC------------------------GAGGTCAGACTCGAGGATTTGCTCATGGGGGCCGCCTAGAAGCAGCTGAGCATGAGTCAAAACATCTAAATCATCAGGATTTTCTGAAAGCGAGAGTAAAGGACGAGAGTTAACAATTGCCGTGATCTGAAAGATCAGCTCGTTCGCAG-CTCGTTGAAGCTAAGCACAAATGGTCCAACTGAGCGGTATAGG
dp5	Unknown_singleton_2900:1284-1480 -		GCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGTTAGGTCAGGCTCGAGGATTTGTTCATGGGGGCCGCCTAAAAGCAGATGAGCAGGAGTCAAAACGTCTAAATCATCAGGATTTTCTGAAAGCGAGAGCAAAGGGCGAGAGTTAACAATTGCAGTGATCTGACAGATCAG--AGTGCGCAG-CTCGTCGAAGCTAAGCACAGATGGTCCAACTGAGCGGTACAGG
droWil2	scf2_1100000009429:1091-1264 -		AGGACG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCTAAAGGCGCTGCACCGATCAGAAAATGACCGGGTGTTAATACCATTAAATCGTCAGAATCATTTGATAGGGGACATAACGGTCTTGAATTTAAAGAAGACTCAATCTGTGCCAACAC--AGT-TGCAT-TTCCTCAAATGTTAAAACT---TGTCCGAGGGCTCTCTTCTGA
droVir3	scaffold_9529:5385-5610 +		GCTGCG--------------------------------------------------------------------------------------------------------------------------TCACACGCTGCCAGCCATCCAAACGGTCGTAGTTTAATTTGGTCAACTCTGGCTCGATGACGGCTGATGAAGGACCACCAAGCAGTAGATGAGCAGGAGTCAGGACATCTAGATCTGCTGGGTTCTCTGAAAG-------------CGTGAGTTAACAATAGCTGTGATTTGGCAAACAAG--AGTACGAAG-CTCTTCAAGAGTACGTAAAGAGCGGCCGATAGAGCGATAGAAG
droMoj3	scaffold_6111:26654-26923 +		GTTGTA---------------A----------------------------------------------------CAAGTTGAG-ATATTCGTCCCGCCAACGAGTCCAGAACACCTGCTGGAGATAGCTTACACGCTGCCAAGCATCCAAACGATTAAAATTGAGCCCTGTC-----------------------AGGAGGGCCACCGTTGAGGAAATGCGCAGGAGTCAACACGTCTATGTCTGATGGGTGCTCTGAAATCGAAACTGAAGGGCGTGAATTAACGACAGCTGCGATGTTGCAAACCAA--TGTGCGAAG-CTCATCGTAAGTTAGGGCGGAAGACCCAACACATCGGTAAAAA
droGri2	scaffold_14940:2666-2855 +		AG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTGGCTCTAAAAATGTTGATGGAGGTCCGCCAATCAAAAAATGGACTGGAATCAAAACGTCTAAATCGCCAGGATTCTCTGAAATTGAGACTAAAGGGCGAGAATTAATAATGGCCGCGATTTGGCAAACGAG--AGTTCGCAACCCCCTCAAATCTGAGCAGCGACTGGTCAACACAGCGATAAAAA
droAna3	scaffold_13239:583398-583641 -		ACTGCA---------------G------------------------------------------------------------------------------------------------------GAAGACACACGCTGCCAACTGTTCATACGGTTGAAATTCAGCTTTGTGACATCAGGCTCGATAAAACTTACTGACGGGCCACCAGTTAAAAAATGGGATGGCGTTAGGACATCAAGGTCTGCAGGATCCTCTGAAAGAGACAATAAAGGCCGTGAGTTTATGACAGCACCAATGTGACAGAGCAG--AGTTCGCAG-CTCGTCAAATCCAAGAGCTGAGGATCCAACGGTCCGGTAAAAA
droBip1	scf7180000395244:10707-10985 -		GGGGCC-AAGGCAGGACCGGAGGCACGCCAT---TTGG------------------------------------------------------------------------AGCGCTGCTGGAGAAG------GTTTAGGTACTCCTCCAACCGGTTGAAGTTCAGCTTTGTGACATCAGGCTCGATAAAGCTGACTGACGGACCACCAGTTAAAAAATGAGCCGACGTCAGAACACCAAGGAATGCAGGATTTTCAGAAAGAGACAATAAGGGTCGTGAATTTATGACAGCCCCAATATGGCACAGCAG--CGTTCGCAG-CTCCTTAAATCCAAGAACTGCAGATCCGACAGCTCGGTAAAAA
droKik1	scf7180000299571:107-293 -		G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGGCTCGGGAAACAAGGCCAGAGGAGCAGTACCCAAGAAGTGCGCCGGTGTCAGCACATCAAGATCGCCAGGGTGTTCTGAAAGTGAGACTAAAGGACGAGAATTAATGATTGCCGCGATGTGGCAAACGAG--AGTGCGCAG-GTCATCAGCGGGCAGTACTGCAGGTCCAACAGATCGGTAGAAG
droFic1	scf7180000453292:11127-11312 +		T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGACTCGATGAATGAGAATGGTGGGCCACCATTCAGAAAGTGGGCTGGCGTTAGCACATCCAGATCAGCGTGATTTTCTGAAATTGAGACTAAAGGCAGGGAGTTATCTACTGCCGAAATATGGCACAGAAG--AGTCCGCAG-CTCGTCGAAGGTCAACACTGAAGGCCCAATAGCGCGGTAGAAA
droEle1	scf7180000490364:34883-35191 +		AAGGGCCAACGCATG---GGAGGTAGATTTTCATCCTTCACCAGCACTACGTCGTTGATCTTTAGCTTTCGTTC-AG----GAG----------------------------------------ACCGCCAGACGCTGCCAGTCATCCAACCAGTTATAATTGAGCTTGGTTAGATCGGGCTCAATGAT----AGTAGTAGGCCACCAAATTGGAAGTGCGCAGGTGTCAAAACATCGAGGTCATCTGGATTCTCTGAAATTGATAACAAGGGGTGAGAGTTAATGATTGACGCAATCTGACTAATCAG--AGTGCGAAG-TTCATCAAAACTTAAAGTTTGGCGGCCAACAGAGTGGTAGAAA
droRho1	scf7180000776807:6643-6884 +		ACCGTG--------------------------------------------------------------------------------------------------ACCAGAAGATTTGTTGAAAATAAACAATTCTTTGCCAGCGGTCCAAACGGCTGAAGTTCAGCTTTGTGTCGTCAGGCTCAGCG-------------GAACTGTGCCAAGAAAGTGTACAGGAGTTAGCACCTCAAGGTCTGCCGGATTCTCTGAAAGAGGGAGTAAAGGTCGTGAGTTGATAACTGCCGTAATGTTGCAAACGAG--TGTAAGCAA-TTCATCGAATGATAATAAAGATGGGCCAACC--------GAAA
droBia1	scf7180000301712:19152-19386 -		AGTGAG--------------------------------------------------------------------------------------------------------------------------CCACGCGTTGTTATCCATCCAAGCGTTTAAAGTTAAGACTGGTCACATCCGGCTCGACAAAAGACGAAGGCAGACCACC----AAAAAATGTGCTGGTGTTAATCCATCCAGATTAGCGGGATTTCCTGAAATCGAGACAACTGGTCAAGAATTAAAATCCGCCAAAATGTGACACACCAG--GGTCCGAAA-CTCCTCAAAGGCTAGCACAGCAGTTCCAGCAGCGCAGTAGAAA
droTak1	scf7180000410413:1487-1725 +		AGTAGG--------------------------------------------------------------------------------------------------------------------------CCACGCGTTGCCATCCATCCAAGCGATTGAAGTTGAGACTGGTCACATCTGGCTCGACGAAAGATGAAGGCGGACCACCATTCAAAAAATGTGCTGGGGCTAACACATCCAGATCAGCGGGGTTTTCTGAAATCGAGACTAATGGTCGAGAATTAACAACCGCCGAAATGTGACACACCAA--GGTCCGCAA-CTCCTCAAAGGCTAAAACAGCAGTGCCAACAACGCGGTAAAAA
droEug1	scf7180000409728:12770-12965 -		GCCA-----------------------------------------------------------------------------------------------------------------------------------------CCGGCTCAGACGATCGAGGCTAAGATGGG----------------------------TGTAGACCCAATGAGAATGTGTGCATTAGTCAGGACAGCGATGTCGTCTGGGTTTTCTGAAATGGGTCAGAGTGGCCGTGAGTTCAACATTACCGAAAATTCACAAACTAG--CGTTAGCAG-CTCGTGAAATGTGAGAACGGCTTTTCCATCAACGCGAACAAGG
dm3	chr2RHet:1279358-1279614 +		AACGAG--------------------------------------------------------------------------------------------------CCCAAAACATCTGCTGAAGGTGTGTTACTTTCTCCCATCCGTCTAAACGATTGTAGTTCAG-----TCAAGCCTGGCACTACAAGCGTCTCAGCAGGTCCGCAAAGAAGACGGCGTGCAGGGGTCAAAACATTAAGGTAGCCTGGTTTCTCTGAAATCGAAACTAAAGGCCGAGAATTAACTATTGCAGAAACTTAACACACGAG--GGTACGCAG-CTCCTCACAACTGAGAAGCGATGTTCGAACGCAGCG-AACAGA
droSim2	3l:23442522-23442792 +		ACTTGCAATGCTGCT---GAAC----------------------------------------------------TAACGTTAC-ACATTCTTCCTTCTACTTAGAGCAGAATATTTACAGCAAAAACGATACGCGCTGCCACACATTCAAGCTCGTATAGTTGAGACTTATCACGTTAGGCTCACAGAAAGAATAAGGAGGA------------------------------ACATCCATATC----AGGCTCTCTGAAAGTAAATCTGAAGGTCTAGAATTAATTAAGGCTGCGATATGGCATTAAAG--AGTCCTTAA-TTAATCGAATGATAGGACTGAAGGACCCACAGCACGATAAAAA
droSec2	scaffold_662:3038-3309 +		AAAGGCCATCTCATG---GGGTGTAGATTCTCATCCTTAAC--------------------------------------------------------------------------------------GAGATGCGCTGCCAAGAGTCAAGCCCATTATAGTTTAGGCCCGTTATATCCGGCTCGTCAAACGACGAAGGCGGACCACCATTGGGAAAATGCGCCGGAGTGAGGACGTCCAGATCAGCAGGGTTCTATGAAATGGGAACTAAATGTCTGGAGTTAATAACTGCCGCGATGTGGCACACCAG--CGTCCTCAG-CTCGTCGAAGGTCAGAACCGCCGTACCCACAGCGCGGTAGAAA
droYak3	v2_chrUn_7000:4778-5039 -		AAAGGCCATCTCATT---GGGGGTAGATTCTCATTCTTAACAAGAACGACGTTGTCCACGGCTACGC--------------------------------------------------------------CAG--------------------------------GCTT--TGGGGTGCGGCTCGTCAAACGACGAAGGCGGACCACCATTGAGAAAATACGCCGGAGTGAGGACGTCCAGATCGGCAGGGTTCTCTGAAATGGGAACTAAAGGTCTGGAGTTAATAACTGCCGAGATGTGGCACACCAG--CGTCCTCAG-CTCGTCGAAGGTCAGAACCGCCGTACCCACAGCGCGGTAGAAA
droEre2	scaffold_4784:23857866-23858103 -		AAAGGCGACTTCATG---GGTGGCAAATTTTCGTACTTAACT-TAACCATGTCATCCTAAACAAAACCAGGCTT-GG----GAG----------------------------------------TGCGCCATACTCTTCCTTCCATCGGGA---------------------------------------------------CC-----------------------AGAAAACATCAGGATTGGCAGGGCTTTCTGAAATTAATACTAAAGGTCGAGAATTAACTACCGCAGATATGTGACAAAGAAG--GGTTCTCAG-CTCATGGAAGGTCAGTATAAAAGAGCCCACAGCACGGTAAAAG

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droPer2

AGTGGTCAACGCATT---GGAGGAAGATCAT---TTTTACA------------------------------------------------------------------------AAT----------GTTTGCGCGGAGGTACGCCTC------------------------GAGGTCAGACTCGAGGATTTGCTCATGGGGGCCGCCTAGAAGCAGCTGAGCATGAGTCAAAACATCTAAATCATCAGGATTTTCTGAAAGCGAGAGTAAAGGACGAGAGTTAACAATTGCCGTGATCTGAAAGATCAGCTCGTTCGCAG-CTCGTTGAAGCTAAGCACAAATGGTCCAACTGAGCGGTATAGG	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
...................................................................................................................T----------GTTTGCGCGGAGGTACGCCTC------------------------GAGG.............................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0
......................................................................................................................................................................................CGAGGATTTGCTCATGGGGG..................................................................................................................................................................	20	20	0.10	2	2	0	0	0	0	0
......................................................................................................................................................................................CGAGGATTTGCTCATGGGGGC.................................................................................................................................................................	21	20	0.10	2	2	0	0	0	0	0
.....................................................................................................................................................................................TCGAGGATTTGCTCATGGGGGCCGCC.............................................................................................................................................................	26	20	0.05	1	0	1	0	0	0	0
.....................................................................................................................................................................................TCGAGGATTTGCTCATGG.....................................................................................................................................................................	18	20	0.05	1	0	1	0	0	0	0
....................................................................................................................................................................................CTCGAGGATTTGCTCATGGG....................................................................................................................................................................	20	20	0.05	1	0	1	0	0	0	0
..................................................................................................................................................................................................................................................CATCAGGATTTTCTGAAAGCGA....................................................................................................	22	20	0.05	1	0	1	0	0	0	0
..............................................................................................................................................................................................................................................AAATCATCAGGATTTTCTGAAAG.......................................................................................................	23	20	0.05	1	0	1	0	0	0	0
.......................................................................................................................................................................................GAGGATTTGCTCATGGGGGCCGCC.............................................................................................................................................................	24	20	0.05	1	0	1	0	0	0	0

dp5

GCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGTTAGGTCAGGCTCGAGGATTTGTTCATGGGGGCCGCCTAAAAGCAGATGAGCAGGAGTCAAAACGTCTAAATCATCAGGATTTTCTGAAAGCGAGAGCAAAGGGCGAGAGTTAACAATTGCAGTGATCTGACAGATCAG--AGTGCGCAG-CTCGTCGAAGCTAAGCACAGATGGTCCAACTGAGCGGTACAGG	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
.....................................................................................................................................................................................................................................................................................GAGTTAACAATTGCAGTGATCTGACA.............................................................	26	17	5.47	93	0	92	0	0	0	0	0	1	0	0
.....................................................................................................................................................................................................................................................................................GAGTTAACAATTGCAGTGATCTGA...............................................................	24	17	5.18	88	0	71	0	0	0	0	1	13	3	0
.....................................................................................................................................................................................................................................................................................GAGTTAACAATTGCAGTGATCTG................................................................	23	18	4.78	86	1	74	2	0	1	0	3	2	3	0
.....................................................................................................................................................................................................................................................................................GAGTTAACAATTGCAGTGATCTGACAGA...........................................................	28	17	3.41	58	0	56	0	0	0	0	2	0	0	0
......................................................................................................................................................................................................................................AAACGTCTAAATCATCAGGATTT...............................................................................................................	23	17	3.24	55	0	55	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................GGAGTCAAAACGTCTAAATCATCAGGA..................................................................................................................	27	13	2.31	30	0	29	0	0	0	0	0	0	1	0
.....................................................................................................................................................................................................................................................................................GAGTTAACAATTGCAGTGATCT.................................................................	22	18	2.22	40	0	38	0	0	0	0	0	2	0	0
............................................................................................................................................................................................................................................................................................................................................TAAGCACAGATGGTCCAACTGAG.........	23	15	1.87	28	0	6	0	0	0	0	0	19	3	0
......................................................................................................................................................................................................................................AAACGTCTAAATCATCAGGATTTTC.............................................................................................................	25	17	1.53	26	0	26	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................GAGTTAACAATTGCAGTGATCTGAC..............................................................	25	17	1.53	26	0	23	0	0	0	0	0	0	3	0
.....................................................................................................................................................................................................................................................................................GAGTTAACAATTGCAGTGATCTGACAG............................................................	27	17	1.47	25	0	20	0	0	1	0	0	0	4	0
...............................................................................................................................................................................................................................GGAGTCAAAACGTCTAAATCATCAGG...................................................................................................................	26	13	1.38	18	0	10	0	0	0	0	0	3	5	0
.............................................................................................................................................................................................................................................................TCTGAAAGCGAGAGCAAAGGGCGA.......................................................................................	24	14	1.14	16	0	0	0	0	0	0	0	14	2	0
.....................................................................................................................................................................................TCGAGGATTTGTTCATGGGGGCCGCC.............................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	1	0	0
.......................................................................................................................................................................................GAGGATTTGTTCATGGGGGCCGCC.............................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	1	0
...............................................................................................................................................................................................................................GGAGTCAAAACGTCTAAATCATCAGGAT.................................................................................................................	28	13	0.85	11	0	9	1	0	0	0	0	0	1	0
.................................................................................................................................................................................................................................................................................................................TCAG--AGTGCGCAG-CTCGTCGAAGC................................	24	12	0.83	10	0	9	1	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................AGGATTTTCTGAAAGCGAGAG.................................................................................................	21	20	0.80	16	0	0	0	0	0	0	0	1	15	0
...............................................................................................................................................................................................................................GGAGTCAAAACGTCTAAATCATC......................................................................................................................	23	14	0.71	10	0	8	1	0	0	0	0	1	0	0
.............................................................................................................................................................................................................CCTAAAAGCAGATGAGCAGG...........................................................................................................................................	20	14	0.64	9	0	0	0	0	0	0	2	0	7	0
.............................................................................................................................................................................................................................................................TCTGAAAGCGAGAGCAAAGGGCGT.......................................................................................	24	14	0.64	9	0	0	0	0	0	0	0	6	3	0
............................................................................................................................................................................................................................................................TTCTGAAAGCGAGAGCAAAGGGCG........................................................................................	24	14	0.64	9	0	0	0	0	0	0	0	5	4	0
......................................................................................................................................................................................................................................................................................AGTTAACAATTGCAGTGATCTGACA.............................................................	25	18	0.61	11	0	11	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................TAAGCACAGATGGTCCAACTGAGC........	24	15	0.53	8	0	8	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................TTTCTGAAAGCGAGAGCAAAGGGC.........................................................................................	24	16	0.50	8	0	0	0	0	0	0	0	3	5	0
..........................................................................................................................................................................................................................................................TTTTCTGAAAGCGAGAGCAAAGGGCG........................................................................................	26	14	0.50	7	0	0	0	0	0	0	0	1	6	0
.....................................................................................................................................................................................................................................................................................................................................TCGAAGCTAAGCACAGATGGTCCAAC.............	26	17	0.47	8	0	2	0	0	0	0	0	5	1	0
......................................................................................................................................................................................................................................AAACGTCTAAATCATCAGGATT................................................................................................................	22	17	0.47	8	0	6	2	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................GGAGTCAAAACGTCTAAATCATCAG....................................................................................................................	25	13	0.46	6	0	3	0	0	0	0	0	3	0	0
......................................................................................................................................................................................................................................................................................AGTTAACAATTGCAGTGATCTGACAGA...........................................................	27	18	0.44	8	0	8	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................CAGATGGTCCAACTGAGCGGT.....	21	16	0.44	7	0	3	0	0	0	0	4	0	0	0
...............................................................................................................................................................................................................................GGAGTCAAAACGTCTAAATCATCA.....................................................................................................................	24	14	0.43	6	0	5	0	0	0	0	0	0	1	0
...................................................................................................................................................................................................................................................................AGCGAGAGCAAAGGGCGA.......................................................................................	18	14	0.43	6	0	6	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................TTTTCTGAAAGCGAGAGCAAAGGGC.........................................................................................	25	16	0.38	6	0	0	0	0	0	0	0	3	3	0
......................................................................................................................................................................................................................................................................................AGTTAACAATTGCAGTGATCTG................................................................	22	19	0.37	7	0	7	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................TCAG--AGTGCGCAG-CTCGTCGAAGCTA..............................	26	11	0.36	4	0	3	0	0	0	1	0	0	0	0
...........................................................................................................................................................................................................................................................TTTCTGAAAGCGAGAGCAAAGGGCG........................................................................................	25	14	0.36	5	0	0	0	0	0	0	0	0	5	0
....................................................................................................................................................................................................................................................................................AGAGTTAACAATTGCAGTGATCTG................................................................	24	17	0.35	6	0	0	0	0	0	0	0	1	5	0
....................................................................................................................................................................................................TGGGGGCCGCCTAAAAGCAGATGAG...............................................................................................................................................	25	9	0.33	3	0	3	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................TAAGCACAGATGGTCCAACTGA..........	22	15	0.33	5	0	5	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................TTTCTGAAAGCGAGAGCAAAGGG..........................................................................................	23	18	0.33	6	0	1	0	0	0	0	0	0	5	0
.........................................................................................................................................................................................................................................................................................TAACAATTGCAGTGATCTGACAGA...........................................................	24	19	0.32	6	0	2	0	0	0	0	0	4	0	0
............................................................................................................................................................................................................................................................TTCTGAAAGCGAGAGCAAAGGGC.........................................................................................	23	16	0.31	5	0	0	0	0	0	0	0	1	4	0
..........................................................................................................................................................................................................................................................................................................TGACAGATCAG--AGTGCGCAG-CTCGT......................................	25	13	0.31	4	0	1	0	0	2	0	1	0	0	0
.......................................................................................................................................................................................................................................AACGTCTAAATCATCAGGATTT...............................................................................................................	22	17	0.29	5	0	5	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................TCGAAGCTAAGCACAGATGGTCC................	23	17	0.29	5	0	3	1	0	0	0	1	0	0	0
...........................................................................................................................................................................................................................................................TTTCTGAAAGCGAGAGCAAAGGGCGT.......................................................................................	26	14	0.29	4	0	0	0	0	0	0	0	4	0	0
..........................................................................................................................................................................................................................................................................................................................................GCTAAGCACAGATGGTCCAACTGA..........	24	14	0.29	4	0	4	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................TAAGCACAGATGGTCCAACTGAGCGG......	26	14	0.29	4	0	4	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................GATGGTCCAACTGAGCGGTACAGG	24	14	0.29	4	0	3	0	0	0	0	1	0	0	0
.............................................................................................................................................................................................................................................................TCTGAAAGCGAGAGCAAAGGGCG........................................................................................	23	14	0.29	4	0	0	0	0	0	0	0	2	2	0
...............................................................................................................................................................................................................................................................TGAAAGCGAGAGCAAAGGG..........................................................................................	19	18	0.28	5	0	4	0	0	0	0	1	0	0	0
........................................................................................................................................................................................................................................................GATTTTCTGAAAGCGAGAGCAAAGGG..........................................................................................	26	18	0.28	5	0	0	0	0	0	0	0	0	5	0
......................................................................................................................................................................................................................................................................................AGTTAACAATTGCAGTGATCTGA...............................................................	23	18	0.28	5	0	5	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................GCAG-CTCGTCGAAGCTAAGCACAGATGG...................	28	15	0.27	4	0	0	0	0	0	0	0	4	0	0
...................................................................................................................................................................................................................................................................................GAGAGTTAACAATTGCAGTGATC..................................................................	23	15	0.27	4	0	4	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................TGACAGATCAG--AGTGCGCAG-CTCGTC.....................................	26	12	0.25	3	0	2	0	0	0	0	1	0	0	0
......................................................................................................................................................................................................................................AAACGTCTAAATCATCAGGATTTT..............................................................................................................	24	17	0.24	4	0	4	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................TCAG--AGTGCGCAG-CTCGTCGAAG.................................	23	13	0.23	3	0	3	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................GAGTTAACAATTGCAGTGATC..................................................................	21	18	0.22	4	0	3	1	0	0	0	0	0	0	0
.................................................................................................................................................................................................TCATGGGGGCCGCCTAAAAGCAGATG.................................................................................................................................................	26	9	0.22	2	0	2	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................TTTTCTGAAAGCGAGAGCAAAGGG..........................................................................................	24	18	0.22	4	0	1	0	0	0	0	0	2	1	0
...........................................................................................................................................................................................................................................................TTTCTGAAAGCGAGAGCAAAGG...........................................................................................	22	18	0.22	4	0	3	0	0	0	0	0	0	1	0
..............................................................................................................................................................................................................CTAAAAGCAGATGAGCAGGA..........................................................................................................................................	20	14	0.21	3	0	0	0	0	0	0	0	0	3	0
...........................................................................................................................................................................................................................................................TTTCTGAAAGCGAGAGCAAAGGGCGA.......................................................................................	26	14	0.21	3	0	1	0	0	0	0	0	0	2	0
..............................................................................................................................................................................................................CTAAAAGCAGATGAGCAGG...........................................................................................................................................	19	14	0.21	3	0	0	0	0	0	0	0	0	3	0
...........................................................................................................................................................................................................................................................................................................................................CTAAGCACAGATGGTCCAACTGAG.........	24	15	0.20	3	0	3	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................G-CTCGTCGAAGCTAAGCACAGATGG...................	25	15	0.20	3	0	0	0	0	0	0	0	3	0	0
............................................................................................................................................................................................................GCCTAAAAGCAGATGAGCAGGAGTCAA.....................................................................................................................................	27	10	0.20	2	0	0	0	0	0	0	0	0	2	0
...........................................................................................................................................................................................................................................................................................................................................CTAAGCACAGATGGTCCAACTGAGC........	25	15	0.20	3	0	3	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................CGAAGCTAAGCACAGATGGT..................	20	20	0.20	4	0	0	0	0	0	0	2	0	2	0
......................................................................................................................................................................................................................................................................................................................................CGAAGCTAAGCACAGATGGTC.................	21	20	0.20	4	0	0	0	0	0	1	1	0	2	0
...................................................................................................................................................................................................................................................................................................................................................AGATGGTCCAACTGAGCGGTA....	21	16	0.19	3	0	0	0	0	0	0	1	0	2	0
...............................................................................................................................................................................................................................................................TGAAAGCGAGAGCAAAGGGC.........................................................................................	20	16	0.19	3	0	3	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................CTGAAAGCGAGAGCAAAGGGC.........................................................................................	21	16	0.19	3	0	3	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................TAACAATTGCAGTGATCTGACAGATC.........................................................	26	17	0.18	3	0	1	1	0	1	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................GAGTTAACAATTGCAGTGATCTGACAA............................................................	27	17	0.18	3	0	3	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................AGAGTTAACAATTGCAGTGATC..................................................................	22	17	0.18	3	0	1	0	0	0	0	0	1	1	0
.....................................................................................................................................................................................................................................................................................GAGTTAACAATTGCAGTGATCTGAA..............................................................	25	17	0.18	3	0	3	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................GAAGCTAAGCACAGATGGTCC................	21	18	0.17	3	0	3	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................G--AGTGCGCAG-CTCGTCGAAGCTAAGC...........................	26	12	0.17	2	0	2	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................GAGTTAACAATTGCAGTGA....................................................................	19	18	0.17	3	0	3	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................TTTTCTGAAAGCGAGAGCAAAG............................................................................................	22	18	0.17	3	0	0	0	0	0	0	0	0	3	0
............................................................................................................................................................................................................................................................................................................................................TAAGCACAGATGGTCCAACT............	20	19	0.16	3	0	3	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................TAAGCACAGATGGTCCAAC.............	19	19	0.16	3	0	3	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................AGTTAACAATTGCAGTGATCT.................................................................	21	19	0.16	3	0	3	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................CAGATGAGCAGGAGTCAAAACGTC...............................................................................................................................	24	13	0.15	2	0	0	0	0	0	0	0	0	2	0
................................................................................................................................................................................................................................GAGTCAAAACGTCTAAATCATCAGGA..................................................................................................................	26	13	0.15	2	0	2	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................GAGTCAAAACGTCTAAATCATCAGGAT.................................................................................................................	27	13	0.15	2	0	2	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................TCAGGATTTTCTGAAAGCGAGAGC................................................................................................	24	20	0.15	3	0	0	0	0	0	0	0	3	0	0
.............................................................................................................................................................................................................................................................TCTGAAAGCGAGAGCAAAGGGCGAA......................................................................................	25	14	0.14	2	0	0	0	0	0	0	0	0	2	0
...............................................................................................................................................................................................................................................................TGAAAGCGAGAGCAAAGGGCGAGA.....................................................................................	24	14	0.14	2	0	2	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................TGATCTGACAGATCAG--AGTGCGCAG-C..........................................	26	14	0.14	2	0	2	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................TGCGCAG-CTCGTCGAAGCTAAGCACA........................	26	14	0.14	2	0	2	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................TGAAAGCGAGAGCAAAGGGCGA.......................................................................................	22	14	0.14	2	0	2	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................TGAAAGCGAGAGCAAAGGGCG........................................................................................	21	14	0.14	2	0	1	0	0	0	0	1	0	0	0
.................................................................................................................................................................................................................................................................AAAGCGAGAGCAAAGGGCG........................................................................................	19	14	0.14	2	0	2	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................TCTGAAAGCGAGAGCAAAGGGCGAC......................................................................................	25	14	0.14	2	0	0	0	0	0	0	0	1	1	0
..................................................................................................................................................................................................................................................................................................................CAG--AGTGCGCAG-CTCGTCGAAGC................................	23	14	0.14	2	0	2	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................AGCGAGAGCAAAGGGCGAGA.....................................................................................	20	14	0.14	2	0	2	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................TCAAAACGTCTAAATCATCAGGATTT...............................................................................................................	26	15	0.13	2	0	2	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................GTGCGCAG-CTCGTCGAAGCTA..............................	21	15	0.13	2	0	2	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................AGCACAGATGGTCCAACTGAG.........	21	15	0.13	2	0	0	0	0	0	0	0	0	2	0
.........................................................................................................................................................................................................................................................................................................................TGCGCAG-CTCGTCGAAGCTAA.............................	21	15	0.13	2	0	0	0	0	0	0	0	0	2	0
.................................................................................................................................................................................................................................................................................................................................................ACAGATGGTCCAACTGAGCGG......	21	15	0.13	2	0	1	0	0	0	0	0	0	1	0
................................................................................................................................................................................................................................................................................................................................................CACAGATGGTCCAACTGAGCGG......	22	15	0.13	2	0	2	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................TAAGCACAGATGGTCCAACTGAGA........	24	15	0.13	2	0	2	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................GATGAGCAGGAGTCAAAACG.................................................................................................................................	20	15	0.13	2	0	0	0	0	0	0	0	0	2	0
..................................................................................................................................................................................................................AAGCAGATGAGCAGGAGTC.......................................................................................................................................	19	16	0.13	2	0	1	0	0	0	0	1	0	0	0
.............................................................................................................................................................................................................................................................TCTGAAAGCGAGAGCAAAGGGC.........................................................................................	22	16	0.13	2	0	1	0	0	0	0	0	1	0	0
....................................................................................................................................................................................................................................................................................................................................................GATGGTCCAACTGAGCGGTACA..	22	16	0.13	2	0	2	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................AACGTCTAAATCATCAGGATTTTC.............................................................................................................	24	17	0.12	2	0	2	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................TCGAAGCTAAGCACAGATGGTCCA...............	24	17	0.12	2	0	2	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................AAAACGTCTAAATCATCAGGATTT...............................................................................................................	24	17	0.12	2	0	2	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................AACGTCTAAATCATCAGGATT................................................................................................................	21	17	0.12	2	0	2	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................TGGTCCAACTGAGCGGTACAG.	21	17	0.12	2	0	0	0	0	0	0	0	0	2	0
...............................................................................................................................................................................................................................................................................................TTGCAGTGATCTGACAGATCAG--AG...................................................	24	17	0.12	2	0	2	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................ATGGGGGCCGCCTAAAAGC......................................................................................................................................................	19	9	0.11	1	0	0	0	0	0	1	0	0	0	0
..........................................................................................................................................................................................................CCGCCTAAAAGCAGATGAGCAGGAGTCA......................................................................................................................................	28	9	0.11	1	0	0	0	0	0	0	1	0	0	0
...................................................................................................................................................................................................ATGGGGGCCGCCTAAAAGCAGATGA................................................................................................................................................	25	9	0.11	1	0	0	0	0	0	0	0	0	1	0
......................................................................................................................................................................................................................................................................................AGTTAACAATTGCAGTGATCTGACAG............................................................	26	18	0.11	2	0	2	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................TGGGGGCCGCCTAAAAGCAG....................................................................................................................................................	20	9	0.11	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................GCAG-CTCGTCGAAGCTAAGCACAGA......................	25	18	0.11	2	0	2	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................TAACAATTGCAGTGATCTGA...............................................................	20	19	0.11	2	0	0	0	0	0	0	0	2	0	0
........................................................................................................................................................................................................................................................................................TTAACAATTGCAGTGATCTGA...............................................................	21	19	0.11	2	0	2	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................TCGAAGCTAAGCACAGATGGT..................	21	20	0.10	2	0	1	0	0	0	0	0	0	1	0
.........................................................................................................................................................................................................................................................................................TAACAATTGCAGTGATCTG................................................................	19	20	0.10	2	0	0	0	0	0	0	2	0	0	0
........................................................................................................................................................................................................................................................GATTTTCTGAAAGCGAGAGC................................................................................................	20	20	0.10	2	0	2	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................GAAGCTAAGCACAGATGGTC.................	20	20	0.10	2	0	2	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................AAAAGCAGATGAGCAGGAGTCA......................................................................................................................................	22	11	0.09	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................AAAAGCAGATGAGCAGGAGTC.......................................................................................................................................	21	11	0.09	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................CTAAAAGCAGATGAGCAGGAGTCAAA....................................................................................................................................	26	11	0.09	1	0	0	0	0	0	0	0	0	1	0
...........................................................................................................................................................................................................CGCCTAAAAGCAGATGAGCAG............................................................................................................................................	21	11	0.09	1	0	0	0	0	0	0	1	0	0	0
.................................................................................................................................................................................................................................................................................................................TCAG--AGTGCGCAG-CTCGTCGAAGCT...............................	25	12	0.08	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................G--AGTGCGCAG-CTCGTCGAAGCTAAG............................	25	12	0.08	1	0	0	0	0	0	0	0	0	1	0
.........................................................................................................................................................................................................................................................................................................CTGACAGATCAG--AGTGCGCAG-CTCGTC.....................................	27	12	0.08	1	0	0	0	0	0	0	1	0	0	0
.......................................................................................................................................................................................................................................................................................................................AGTGCGCAG-CTCGTCGAAGCTAAGC...........................	25	12	0.08	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................TCTGACAGATCAG--AGTGCGCAG-CTCGTC.....................................	28	12	0.08	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................CGAGAGTTAACAATTGCAGTGATC..................................................................	24	12	0.08	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................CTAAAAGCAGATGAGCAGGAG.........................................................................................................................................	21	13	0.08	1	0	0	0	0	0	0	1	0	0	0
.................................................................................................................................................................................................................................AGTCAAAACGTCTAAATCATCAGG...................................................................................................................	24	13	0.08	1	0	0	0	0	0	0	0	0	1	0
...............................................................................................................................................................................................................................GGAGTCAAAACGTCTAAATCATCAGGC..................................................................................................................	27	13	0.08	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................AAAAGCAGATGAGCAGGAG.........................................................................................................................................	19	13	0.08	1	0	0	0	0	0	0	0	0	1	0
...............................................................................................................................................................................................................TAAAAGCAGATGAGCAGGAGT........................................................................................................................................	21	13	0.08	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................AAGGGCGAGAGTTAACAATTGCA........................................................................	23	13	0.08	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................AAAGGGCGAGAGTTAACAATTGCAG.......................................................................	25	13	0.08	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................TAAAAGCAGATGAGCAGGAG.........................................................................................................................................	20	13	0.08	1	0	0	0	0	0	0	0	0	1	0
...........................................................................................................................................................................................................................................................................CAAAGGGCGAGAGTTAACAATTGCAG.......................................................................	26	13	0.08	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................GGAGTCAAAACGTCTAAATCATCAGGAA.................................................................................................................	28	13	0.08	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................AGCAGGAGTCAAAACGTCTAA............................................................................................................................	21	13	0.08	1	0	0	0	0	0	0	1	0	0	0
..........................................................................................................................................................................................................................................................................................................................................GCTAAGCACAGATGGTCCAACTGAGCGG......	28	13	0.08	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................GCAGATGAGCAGGAGTCAAAACGTC...............................................................................................................................	25	13	0.08	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................CAAAGGGCGAGAGTTAACAAT............................................................................	21	13	0.08	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................GAGTCAAAACGTCTAAATCATCAGG...................................................................................................................	25	13	0.08	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................AGCACAGATGGTCCAACTGAGCGGT.....	25	14	0.07	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................GCTAAGCACAGATGGTCCAACTGAGC........	26	14	0.07	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................AG--AGTGCGCAG-CTCGTCGAAGC................................	22	14	0.07	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................AGCACAGATGGTCCAACTGAGCG.......	23	14	0.07	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................TAAGCACAGATGGTCCAACTGAGCGGTA....	28	14	0.07	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................AAGCTAAGCACAGATGGTCCAACTGA..........	26	14	0.07	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................TTCTGAAAGCGAGAGCAAAGGGCGA.......................................................................................	25	14	0.07	1	0	0	0	0	0	0	0	0	1	0
................................................................................................................................................................................................................................GAGTCAAAACGTCTAAATCATC......................................................................................................................	22	14	0.07	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................TGCGCAG-CTCGTCGAAGCTAAGC...........................	23	14	0.07	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................AAGCACAGATGGTCCAACTGAGCGG......	25	14	0.07	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................GGAGTCAAAACGTCTAAATCAT.......................................................................................................................	22	14	0.07	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................TAAAAGCAGATGAGCAGGA..........................................................................................................................................	19	14	0.07	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................TCTGAAAGCGAGAGCAAAGGGCGTA......................................................................................	25	14	0.07	1	0	0	0	0	0	0	0	0	1	0
...................................................................................................................................................................................................................................................................AGCGAGAGCAAAGGGCGAGAG....................................................................................	21	14	0.07	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................GATCAG--AGTGCGCAG-CTCGTC.....................................	21	14	0.07	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................G--AGTGCGCAG-CTCGTCGAAGCT...............................	22	14	0.07	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................GGAGTCAAAACGTCTAAATCA........................................................................................................................	21	14	0.07	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................AAAGCGAGAGCAAAGGGCGAGT.....................................................................................	22	14	0.07	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................GAGAGCAAAGGGCGAGAGTT..................................................................................	20	14	0.07	1	0	0	0	0	0	0	1	0	0	0
..........................................................................................................................................................................................................................................................TTTTCTGAAAGCGAGAGCAAAGGGCGT.......................................................................................	27	14	0.07	1	0	0	0	0	0	0	0	0	1	0
..........................................................................................................................................................................................................................................................TTTTCTGAAAGCGAGAGCAAAGGGCGA.......................................................................................	27	14	0.07	1	0	0	0	0	0	0	0	0	1	0
.............................................................................................................................................................................................................................................................TCTGAAAGCGAGAGCAAAGGGCGAGA.....................................................................................	26	14	0.07	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................TAAGCACAGATGGTCCAACTGAGCG.......	25	14	0.07	1	0	0	0	0	0	0	0	0	1	0
................................................................................................................................................................................................................................GAGTCAAAACGTCTAAATCATCA.....................................................................................................................	23	14	0.07	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................GATCTGACAGATCAG--AGTGCGCAG-CT.........................................	26	14	0.07	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................TAAGCACAGATGGTCCAACTGAGCGGT.....	27	14	0.07	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................GCAAAGGGCGAGAGTTAAC...............................................................................	19	14	0.07	1	0	0	0	0	1	0	0	0	0	0
............................................................................................................................................................................................................................................................................AAAGGGCGAGAGTTAACAATTG..........................................................................	22	14	0.07	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................GAAAGCGAGAGCAAAGGGCGT.......................................................................................	21	14	0.07	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................GAGTTAACAATTGCAGTGATCTGACAGAT..........................................................	29	15	0.07	1	0	0	1	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................CACAGATGGTCCAACTGAGCGGT.....	23	15	0.07	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................TGATCTGACAGATCAG--AGTGCGC..............................................	23	15	0.07	1	0	0	0	0	0	1	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................AAGCACAGATGGTCCAACTGA..........	21	15	0.07	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................GCAG-CTCGTCGAAGCTAAGCACAGATG....................	27	15	0.07	1	0	0	0	0	0	0	0	0	1	0
........................................................................................................................................................................................................................ATGAGCAGGAGTCAAAACGTC...............................................................................................................................	21	15	0.07	1	0	0	0	0	0	0	1	0	0	0
..........................................................................................................................................................................................................................................................................................................TGACAGATCAG--AGTGCGCAG-CTC........................................	23	15	0.07	1	0	0	1	0	0	0	0	0	0	0
..........................................................................................................................................................................TTAGGTCAGGCTCGAGGATTTG............................................................................................................................................................................	22	15	0.07	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................GTCGAAGCTAAGCACAGATGGTCCAAC.............	27	15	0.07	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................GGTCCAACTGAGCGGTACAGG	21	15	0.07	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................TGAGCAGGAGTCAAAACGA................................................................................................................................	19	15	0.07	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................CAGATCAG--AGTGCGCAG-CTCG.......................................	21	15	0.07	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................GCACAGATGGTCCAACTGAGC........	21	15	0.07	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................AGATCAG--AGTGCGCAG-CTCG.......................................	20	15	0.07	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................AAGCACAGATGGTCCAACTGAG.........	22	15	0.07	1	0	1	0	0	0	0	0	0	0	0
..T--------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGTTAGGTCAGGCTCGAGGAT...............................................................................................................................................................................	23	15	0.07	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................GAGAGTTAACAATTGCAGTGATCT.................................................................	24	15	0.07	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................AAGCACAGATGGTCCAACTGAGC........	23	15	0.07	1	0	0	1	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................AGAGTTAACAATTGCAGTGATCTGACAGA...........................................................	29	16	0.06	1	0	0	0	0	0	0	1	0	0	0
..........................................................................................................................................................................................................................................................................................................TGACAGATCAG--AGTGCGCAG-C..........................................	21	16	0.06	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................TGAAAGCGAGAGCAAAGGGCA........................................................................................	21	16	0.06	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................CAGATGGTCCAACTGAGCGG......	20	16	0.06	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................GATGGTCCAACTGAGCGG......	18	16	0.06	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................TGCGCAG-CTCGTCGAAGCT...............................	19	16	0.06	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................GATGGTCCAACTGAGCGGTAC...	21	16	0.06	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................TCGTCGAAGCTAAGCACAGATG....................	22	16	0.06	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................AGAGTTAACAATTGCAGTGATCTGA...............................................................	25	16	0.06	1	0	0	0	0	0	0	0	0	1	0
....................................................................................................................................................................................................................................................................................AGAGTTAACAATTGCAGTGATCTGACAG............................................................	28	16	0.06	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................GTCCAACTGAGCGGTACAGG	20	16	0.06	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................ATCTGACAGATCAG--AGTGCGCAG-C..........................................	24	16	0.06	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................GATGGTCCAACTGAGCGGTACAG.	23	16	0.06	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................GCGCAG-CTCGTCGAAGCTAAGCAC.........................	24	16	0.06	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................GAAAGCGAGAGCAAAGGGC.........................................................................................	19	16	0.06	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................ACAGATCAG--AGTGCGCAG-CT.........................................	20	16	0.06	1	0	0	0	0	0	0	1	0	0	0

droWil2

AGGACG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCTAAAGGCGCTGCACCGATCAGAAAATGACCGGGTGTTAATACCATTAAATCGTCAGAATCATTTGATAGGGGACATAACGGTCTTGAATTTAAAGAAGACTCAATCTGTGCCAACAC--AGT-TGCAT-TTCCTCAAATGTTAAAACT---TGTCCGAGGGCTCTCTTCTGA	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
...........................................................................................................................................................................................................................................................CATTTGATAGGGGACATAACGGTCTT.......................................................................................	26	20	0.05	1	0	0	0	1	0

droVir3

GCTGCG--------------------------------------------------------------------------------------------------------------------------TCACACGCTGCCAGCCATCCAAACGGTCGTAGTTTAATTTGGTCAACTCTGGCTCGATGACGGCTGATGAAGGACCACCAAGCAGTAGATGAGCAGGAGTCAGGACATCTAGATCTGCTGGGTTCTCTGAAAG-------------CGTGAGTTAACAATAGCTGTGATTTGGCAAACAAG--AGTACGAAG-CTCTTCAAGAGTACGTAAAGAGCGGCCGATAGAGCGATAGAAG	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
...............................................................................................................................................................................................................................GGAGTCAGGACATCTAGATCTGCTGGG..................................................................................................................	27	6	0.17	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................GTCAGGACATCTAGATCTGCTGGG..................................................................................................................	24	7	0.14	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................GTCAGGACATCTAGATCTGCTGGGTTC...............................................................................................................	27	7	0.14	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................GTCAGGACATCTAGATCTGCTGGGTC................................................................................................................	26	7	0.14	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................ACATCTAGATCTGCTGGGTTCTCTGA..........................................................................................................	26	10	0.10	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................TCTAGATCTGCTGGGTTCTCTG...........................................................................................................	22	10	0.10	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................GACATCTAGATCTGCTGGGTTCTCT............................................................................................................	25	12	0.08	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................AGGACATCTAGATCTGCTGGGT.................................................................................................................	22	12	0.08	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................TGAGCAGGAGTCAGGACATCT..............................................................................................................................	21	12	0.08	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................ACCACCAAGCAGTAGATGAGCAGGAA.........................................................................................................................................	26	12	0.08	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................CAGTAGATGAGCAGGAGTCAGGA...................................................................................................................................	23	14	0.07	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................GACATCTAGATCTGCTGGGTTCT..............................................................................................................	23	14	0.07	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................GTAGATGAGCAGGAGTCAGG....................................................................................................................................	20	15	0.07	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................GACATCTAGATCTGCTGGGTTC...............................................................................................................	22	15	0.07	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................ATAGCTGTGATTTGGCAAACAAG--AG...................................................	25	16	0.06	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................TTTGGCAAACAAG--AGTACGAAG-CTC........................................	25	16	0.06	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................TAGCTGTGATTTGGCAAACAAG--AG...................................................	24	16	0.06	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................ATAGCTGTGATTTGGCAAACAAG--A....................................................	24	17	0.06	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

GTTGTA---------------A----------------------------------------------------CAAGTTGAG-ATATTCGTCCCGCCAACGAGTCCAGAACACCTGCTGGAGATAGCTTACACGCTGCCAAGCATCCAAACGATTAAAATTGAGCCCTGTC-----------------------AGGAGGGCCACCGTTGAGGAAATGCGCAGGAGTCAACACGTCTATGTCTGATGGGTGCTCTGAAATCGAAACTGAAGGGCGTGAATTAACGACAGCTGCGATGTTGCAAACCAA--TGTGCGAAG-CTCATCGTAAGTTAGGGCGGAAGACCCAACACATCGGTAAAAA	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
....TA---------------A----------------------------------------------------CAAGTTGAG-ATATTCGTCCCGC...........................................................................................................................................................................................................................................................................	25	20	19.70	394	271	33	0	0	90	0
.........................................................................................................................................................................................................................TGCGCAGGAGTCAACACGTCTATGT..........................................................................................................................	25	20	7.10	142	99	2	0	0	41	0
.................................................................................................................................................TCCAAACGATTAAAATTGAGCCC....................................................................................................................................................................................................	23	20	6.85	137	42	0	0	0	92	3
.........................................................................................................................................................................................................................TGCGCAGGAGTCAACACGTCTATGTCT........................................................................................................................	27	20	3.10	62	44	0	0	0	17	1
.................................................................................................................................................TCCAAACGATTAAAATTGAGCC.....................................................................................................................................................................................................	22	20	2.65	53	0	0	0	0	53	0
.................................................................................................................................................TCCAAACGATTAAAATTGAGCCCTGTC-----------------------A........................................................................................................................................................................	28	20	2.45	49	48	0	0	0	1	0
.........................................................................................................................................................................................................................TGCGCAGGAGTCAACACGTCTATGTC.........................................................................................................................	26	20	2.30	46	0	32	0	0	0	14
.............................................................................................................................................................................................................................CAGGAGTCAACACGTCTATGTCTGA......................................................................................................................	25	20	2.20	44	35	3	1	0	2	3
.............................................................................................................................................................................................................................CAGGAGTCAACACGTCTATGTCTG.......................................................................................................................	24	20	1.85	37	33	3	0	0	0	1
.............................................................................................................................................................................................................................CAGGAGTCAACACGTCTATGTCTGATG....................................................................................................................	27	20	1.40	28	6	0	0	0	21	1
.....A---------------A----------------------------------------------------CAAGTTGAG-ATATTCGTCCCGCC..........................................................................................................................................................................................................................................................................	25	20	1.15	23	17	0	0	0	6	0
.......................................................................................................................................................................................................................................................................................................................TGTGCGAAG-CTCATCGTAAGTTAGG...........................	25	20	1.15	23	0	23	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................TGTGCGAAG-CTCATCGTAAGTTAGGG..........................	26	1	1.00	1	1	0	0	0	0	0
.....A---------------A----------------------------------------------------CAAGTTGAG-ATATTCGTCCCGC...........................................................................................................................................................................................................................................................................	24	20	0.95	19	19	0	0	0	0	0
.................................................................................................................................................TCCAAACGATTAAAATTGAGCCCTG..................................................................................................................................................................................................	25	20	0.85	17	0	0	0	0	14	3
....TA---------------A----------------------------------------------------CAAGTTGAG-ATATTCGTCC..............................................................................................................................................................................................................................................................................	22	20	0.75	15	12	0	0	0	0	3
.................................................................................................................................................TCCAAACGATTAAAATTGAGCCCTGTC-----------------------AG.......................................................................................................................................................................	29	20	0.70	14	13	0	0	0	1	0
.........................................................................................................................................................................................................................TGCGCAGGAGTCAACACGTCTATGTCTGA......................................................................................................................	29	20	0.60	12	11	0	0	0	0	1
.................................................................................................................................................TCCAAACGATTAAAATTGAGC......................................................................................................................................................................................................	21	20	0.60	12	10	2	0	0	0	0
..................................................................................................................................................CCAAACGATTAAAATTGAGCCCTG..................................................................................................................................................................................................	24	20	0.60	12	12	0	0	0	0	0
.................................................................................................................................................TCCAAACGATTAAAATTGAGCCCTGT.................................................................................................................................................................................................	26	20	0.55	11	0	0	0	0	11	0
..............................................................................TTGAG-ATATTCGTCCCGCCAACGAG....................................................................................................................................................................................................................................................................	25	20	0.50	10	10	0	0	0	0	0
..........................................................................................................................................................................................................................GCGCAGGAGTCAACACGTCTATGT..........................................................................................................................	24	20	0.45	9	9	0	0	0	0	0
.........................................................................................................................................................................................................................TGCGCAGGAGTCAACACGTCTAT............................................................................................................................	23	20	0.30	6	3	0	0	0	3	0
....TA---------------A----------------------------------------------------CAAGTTGAG-ATATTCGTCCC.............................................................................................................................................................................................................................................................................	23	20	0.30	6	0	0	0	1	0	5
.......................................................................................................................................................................................................................................................................................................................TGTGCGAAG-CTCATCGTAAGTTAG............................	24	20	0.30	6	0	5	0	0	0	1
................................................................................................................................................ATCCAAACGATTAAAATTGAGCCCTG..................................................................................................................................................................................................	26	20	0.30	6	6	0	0	0	0	0
................................................................................................................................................ATCCAAACGATTAAAATTGAGCCC....................................................................................................................................................................................................	24	20	0.25	5	0	0	0	0	5	0
...................................................................................................ACGAGTCCAGAACACCTGCTGGAGATA..............................................................................................................................................................................................................................................	27	20	0.25	5	5	0	0	0	0	0
........................................................................................................TCCAGAACACCTGCTGGAGATAGC............................................................................................................................................................................................................................................	24	20	0.25	5	0	0	0	0	5	0
..................................................................................................................................................CCAAACGATTAAAATTGAGCCC....................................................................................................................................................................................................	22	20	0.20	4	3	0	0	0	1	0
.............................................................................................................................................................................................................................CAGGAGTCAACACGTCTATGTC.........................................................................................................................	22	20	0.20	4	0	0	0	0	4	0
.....A---------------A----------------------------------------------------CAAGTTGAG-ATATTCGTCCCG............................................................................................................................................................................................................................................................................	23	20	0.20	4	4	0	0	0	0	0
..TGTA---------------A----------------------------------------------------CAAGTTGAG-ATATTCGTCCCGC...........................................................................................................................................................................................................................................................................	27	20	0.20	4	4	0	0	0	0	0
....TA---------------A----------------------------------------------------CAAGTTGAG-ATATTCGTC...............................................................................................................................................................................................................................................................................	21	20	0.20	4	3	0	0	0	0	1
.....A---------------A----------------------------------------------------CAAGTTGAG-ATATTCGTCCC.............................................................................................................................................................................................................................................................................	22	20	0.20	4	4	0	0	0	0	0
..................................................................................................................................................CCAAACGATTAAAATTGAGCCCTGTC-----------------------A........................................................................................................................................................................	27	20	0.20	4	4	0	0	0	0	0
.TTGTA---------------A----------------------------------------------------CAAGTTGAG-ATATTCGTCCCG............................................................................................................................................................................................................................................................................	27	20	0.15	3	3	0	0	0	0	0
.............................................................................................................................................................................................................................CAGGAGTCAACACGTCTATG...........................................................................................................................	20	20	0.15	3	2	1	0	0	0	0
..............................................................................TTGAG-ATATTCGTCCCGCCAACGAGT...................................................................................................................................................................................................................................................................	26	20	0.15	3	2	0	0	0	1	0
.........................................................................................................CCAGAACACCTGCTGGAGATAGCT...........................................................................................................................................................................................................................................	24	20	0.15	3	3	0	0	0	0	0
..........................................................................................GTCCCGCCAACGAGTCCAGAACACC.........................................................................................................................................................................................................................................................	25	20	0.15	3	0	0	0	0	3	0
.......................................................................................TTCGTCCCGCCAACGAGTCCAGAAC............................................................................................................................................................................................................................................................	25	20	0.15	3	3	0	0	0	0	0
..................................................................................................................................................CCAAACGATTAAAATTGAGCCCTGT.................................................................................................................................................................................................	25	20	0.15	3	3	0	0	0	0	0
..........................................................................................................................................................................................................................GCGCAGGAGTCAACACGTCTATG...........................................................................................................................	23	20	0.15	3	3	0	0	0	0	0
....TA---------------A----------------------------------------------------CAAGTTGAG-ATATTCGTCCCGCC..........................................................................................................................................................................................................................................................................	26	20	0.15	3	0	3	0	0	0	0
.........................................................................................................................................................................................................................TGCGCAGGAGTCAACACGTCTATGTCTC.......................................................................................................................	28	20	0.15	3	3	0	0	0	0	0
................................................................................................................................................ATCCAAACGATTAAAATTGAGCCCTGT.................................................................................................................................................................................................	27	20	0.10	2	2	0	0	0	0	0
.........................................................................................................................................................................................................................TGCGCAGGAGTCAACACGTCT..............................................................................................................................	21	20	0.10	2	2	0	0	0	0	0
...................................................................................................................................................................................................................................TCAACACGTCTATGTCTGATGG...................................................................................................................	22	20	0.10	2	2	0	0	0	0	0
.........................................................................................................................................................................................................................TGCGCAGGAGTCAACACGTCTATGTCTG.......................................................................................................................	28	20	0.10	2	0	0	0	0	0	2
........................................................................................................................................................GATTAAAATTGAGCCCTG..................................................................................................................................................................................................	18	20	0.10	2	2	0	0	0	0	0
.................................................................................................................................................TCCAAACGATTAAAATTGAGCCCTGC.................................................................................................................................................................................................	26	20	0.10	2	0	0	0	0	2	0
.................................................................................................................................................TCCAAACGATTAAAATTGAGCCCC...................................................................................................................................................................................................	24	20	0.10	2	0	0	0	0	2	0
...........................................................................................................................................................................................................CACCGTTGAGGAAATGCGCAGGAGTC.......................................................................................................................................	26	20	0.10	2	2	0	0	0	0	0
..........................................................................................................................................................................................................CCACCGTTGAGGAAATGCGCAGGAG.........................................................................................................................................	25	20	0.10	2	2	0	0	0	0	0
.TTGTA---------------A----------------------------------------------------CAAGTTGAG-ATATTCGTCCCGCC..........................................................................................................................................................................................................................................................................	29	20	0.10	2	0	0	0	0	2	0
...............................................................................................................................................CATCCAAACGATTAAAATTGAGCCC....................................................................................................................................................................................................	25	20	0.10	2	0	0	0	0	2	0
..................................................................................................................................................CCAAACGATTAAAATTGAGCCCTGTC-----------------------.........................................................................................................................................................................	26	20	0.10	2	2	0	0	0	0	0
.....................................................................................................................................................AACGATTAAAATTGAGCCCTGTC-----------------------AGG......................................................................................................................................................................	26	20	0.10	2	1	0	0	0	1	0
.................................................................................................................................................................................................................TGAGGAAATGCGCAGGAGTCAACACG.................................................................................................................................	26	20	0.10	2	2	0	0	0	0	0
...GTA---------------A----------------------------------------------------CAAGTTGAG-ATATTCGTCCCGCCA.........................................................................................................................................................................................................................................................................	28	20	0.10	2	2	0	0	0	0	0
......................................................................................................................................................................................................................AAATGCGCAGGAGTCAACACGTCT..............................................................................................................................	24	20	0.10	2	0	1	0	0	1	0
..........................................................................................................................................................................................................CCACCGTTGAGGAAATGCGCAGGAGT........................................................................................................................................	26	20	0.10	2	2	0	0	0	0	0
...................................................................................................ACGAGTCCAGAACACCTGCTGGAGAT...............................................................................................................................................................................................................................................	26	20	0.05	1	0	0	0	0	1	0
..............................................................................TTGAG-ATATTCGTCCCGCCAACG......................................................................................................................................................................................................................................................................	23	20	0.05	1	1	0	0	0	0	0
...................................................................................................................................................CAAACGATTAAAATTGAGCCCTGTC-----------------------A........................................................................................................................................................................	26	20	0.05	1	1	0	0	0	0	0
........................................................................................................................................................................................................................ATGCGCAGGAGTCAACACGTCTATGTC.........................................................................................................................	27	20	0.05	1	0	0	0	0	1	0
............................................................................................................................................................................................................................GCAGGAGTCAACACGTCTA.............................................................................................................................	19	20	0.05	1	1	0	0	0	0	0
.................................................................................................................................................................................................................................................TCTGATGGGTGCTCTGAAATC......................................................................................................	21	20	0.05	1	0	0	0	1	0	0
....TA---------------A----------------------------------------------------CAAGTTGAG-ATATTCGTCCCGCCT.........................................................................................................................................................................................................................................................................	27	20	0.05	1	0	0	0	0	0	1
............................................................................................................................................................................................................................................CTATGTCTGATGGGTGCTC.............................................................................................................	19	20	0.05	1	0	0	0	0	0	1
....TA---------------A----------------------------------------------------CAAGTTGAG-ATATTCGTCCCG............................................................................................................................................................................................................................................................................	24	20	0.05	1	0	1	0	0	0	0
............................................................................................................................................................................................................................GCAGGAGTCAACACGTCTATG...........................................................................................................................	21	20	0.05	1	1	0	0	0	0	0
....TA---------------A----------------------------------------------------CAAGTTGAG-ATATTCGTCCCGCCAA........................................................................................................................................................................................................................................................................	28	20	0.05	1	0	0	0	0	0	1
...................................................................................................ACGAGTCCAGAACACCTGCTGGAGA................................................................................................................................................................................................................................................	25	20	0.05	1	0	0	0	0	1	0
..................................................................................................................................................CCAAACGATTAAAATTGAGCCCTGTC-----------------------AGG......................................................................................................................................................................	29	20	0.05	1	1	0	0	0	0	0
...........................................................................AAGTTGAG-ATATTCGTCCCG............................................................................................................................................................................................................................................................................	20	20	0.05	1	1	0	0	0	0	0
....................................................................................................................................................................................................................................CAACACGTCTATGTCTGATGG...................................................................................................................	21	20	0.05	1	0	0	0	0	1	0
...................................................................................................................................................................................................................................TCAACACGTCTATGTCTGATGGG..................................................................................................................	23	20	0.05	1	0	0	0	0	0	1
........................................................................................................TCCAGAACACCTGCTGGAGATAGG............................................................................................................................................................................................................................................	24	20	0.05	1	0	0	0	0	1	0
...............................................................................................................................................................................................................GTTGAGGAAATGCGCAGGAGTCA......................................................................................................................................	23	20	0.05	1	1	0	0	0	0	0
...........................................................................................................................................................................................................................CGCAGGAGTCAACACGTCTATGT..........................................................................................................................	23	20	0.05	1	1	0	0	0	0	0
.............................................................................................................................................................................................................................CAGGAGTCAACACGTCTATGTCTGATGG...................................................................................................................	28	20	0.05	1	0	0	0	0	1	0
...................................................................................................................................................................................................................................TCAACACGTCTATGTCTGATGGGT.................................................................................................................	24	20	0.05	1	1	0	0	0	0	0
....TA---------------A----------------------------------------------------CAAGTTGAG-ATATTCGTCAA.............................................................................................................................................................................................................................................................................	23	20	0.05	1	1	0	0	0	0	0
................................................................................GAG-ATATTCGTCCCGCCAACGAGTCC.................................................................................................................................................................................................................................................................	26	20	0.05	1	1	0	0	0	0	0
.....................A----------------------------------------------------CAAGTTGAG-ATATTCGTCCCGCC..........................................................................................................................................................................................................................................................................	24	20	0.05	1	1	0	0	0	0	0
..............................................................................TTGAG-ATATTCGTCCCGCC..........................................................................................................................................................................................................................................................................	19	20	0.05	1	0	0	0	0	1	0
....................................................................................................................................................AAACGATTAAAATTGAGCCCTGTC-----------------------AGG......................................................................................................................................................................	27	20	0.05	1	1	0	0	0	0	0
....TA---------------A----------------------------------------------------CAAGTTGAG-ATATTCGTCCCGTTT.........................................................................................................................................................................................................................................................................	27	20	0.05	1	0	0	0	0	0	1
.................................................................................................................................................................................................................TGAGGAAATGCGCAGGAGTCA......................................................................................................................................	21	20	0.05	1	1	0	0	0	0	0
...................................................................................................ACGAGTCCAGAACACCTGCTGGAGATAG.............................................................................................................................................................................................................................................	28	20	0.05	1	1	0	0	0	0	0
.......................................................................................................GTCCAGAACACCTGCTGGAGATAGC............................................................................................................................................................................................................................................	25	20	0.05	1	1	0	0	0	0	0
................................................................................................................................................................................................................................GAGTCAACACGTCTATGTCTGATGGG..................................................................................................................	26	20	0.05	1	1	0	0	0	0	0
................................................................................................CCAACGAGTCCAGAACACCTG.......................................................................................................................................................................................................................................................	21	20	0.05	1	1	0	0	0	0	0
................................................................................................................................................................................................................TTGAGGAAATGCGCAGGAGTCAACACG.................................................................................................................................	27	20	0.05	1	1	0	0	0	0	0
.................................................................................................................................................................................................................................AGTCAACACGTCTATGTCTGATGG...................................................................................................................	24	20	0.05	1	1	0	0	0	0	0
................................................................................................................................................ATCCAAACGATTAAAATTGAGCC.....................................................................................................................................................................................................	23	20	0.05	1	0	0	0	0	1	0
....TA---------------A----------------------------------------------------CAAGTTGAG-ATATTCG.................................................................................................................................................................................................................................................................................	19	20	0.05	1	1	0	0	0	0	0
.................................................................................................................................................................................................................................AGTCAACACGTCTATGTCTGATGGG..................................................................................................................	25	20	0.05	1	1	0	0	0	0	0
............................................................................AGTTGAG-ATATTCGTCCCG............................................................................................................................................................................................................................................................................	19	20	0.05	1	1	0	0	0	0	0
.........................................................................................................................................................................................................................TGCGCAGGAGTCAACACGTCTA.............................................................................................................................	22	20	0.05	1	0	0	0	0	1	0
............................................................................................................................................................................................................................GCAGGAGTCAACACGTCTATGT..........................................................................................................................	22	20	0.05	1	0	0	0	0	1	0
................................................................................................................................................ATCCAAACGATTAAAATTGAGCCCTGTC-----------------------A........................................................................................................................................................................	29	20	0.05	1	1	0	0	0	0	0
...................................................................................................................................................................................................................................................TGATGGGTGCTCTGAAATC......................................................................................................	19	20	0.05	1	0	0	0	0	1	0
............................................................................................................................................................................................................................GCAGGAGTCAACACGTCTATGTC.........................................................................................................................	23	20	0.05	1	0	0	0	0	1	0
.................................................................................................................................................TCCAAACGATTAAAATTGAG.......................................................................................................................................................................................................	20	20	0.05	1	1	0	0	0	0	0
............................................................................AGTTGAG-ATATTCGTCCCGCC..........................................................................................................................................................................................................................................................................	21	20	0.05	1	1	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................TGTGCGAAG-CTCATCGTAAG................................	20	20	0.05	1	0	0	0	0	0	1
...................................................................................................................................................................................................................................................TGATGGGTGCTCTGAAATCGAA...................................................................................................	22	20	0.05	1	0	0	0	0	0	1
...GTA---------------A----------------------------------------------------CAAGTTGAG-ATATTCGT................................................................................................................................................................................................................................................................................	21	20	0.05	1	1	0	0	0	0	0
...GTA---------------A----------------------------------------------------CAAGTTGAG-ATATTCGTCCCGCC..........................................................................................................................................................................................................................................................................	27	20	0.05	1	1	0	0	0	0	0
.....A---------------A----------------------------------------------------CAAGTTGAG-ATATTCGTCCCGCCAA........................................................................................................................................................................................................................................................................	27	20	0.05	1	1	0	0	0	0	0
..........................................................................CAAGTTGAG-ATATTCGTCCCGCC..........................................................................................................................................................................................................................................................................	23	20	0.05	1	1	0	0	0	0	0
..................................................................................................................................................................................................................GAGGAAATGCGCAGGAGTCAA.....................................................................................................................................	21	20	0.05	1	1	0	0	0	0	0
...................................................................................................................................................................................................................AGGAAATGCGCAGGAGTCAACACGTC...............................................................................................................................	26	20	0.05	1	1	0	0	0	0	0
........................................................................................................................................................................................................................ATGCGCAGGAGTCAACACGTCTATGT..........................................................................................................................	26	20	0.05	1	1	0	0	0	0	0
......................................................................................................AGTCCAGAACACCTGCTGGAGATAGC............................................................................................................................................................................................................................................	26	20	0.05	1	1	0	0	0	0	0
...........................................................................AAGTTGAG-ATATTCGTCCCGCC..........................................................................................................................................................................................................................................................................	22	20	0.05	1	0	0	0	0	1	0
.......................................................................................................................................................................................................................................................................................................................TGTGCGAAG-CTCATCGTAAGTT..............................	22	20	0.05	1	1	0	0	0	0	0
........................................................................................................................................TGCCAAGCATCCAAACGATTAAAATTG.........................................................................................................................................................................................................	27	20	0.05	1	1	0	0	0	0	0
....TA---------------A----------------------------------------------------CAAGTTGAG-ATATTCGTCCCGCCC.........................................................................................................................................................................................................................................................................	27	20	0.05	1	1	0	0	0	0	0
..........................................................................................................................................................................................................................GCGCAGGAGTCAACACGTCTA.............................................................................................................................	21	20	0.05	1	1	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................TGCGAAG-CTCATCGTAAGTTAGG...........................	23	20	0.05	1	1	0	0	0	0	0
..............................................................................................................................................................................................................CGTTGAGGAAATGCGCAGGAGTCAAC....................................................................................................................................	26	20	0.05	1	0	1	0	0	0	0
.............................................................................GTTGAG-ATATTCGTCCCGCCA.........................................................................................................................................................................................................................................................................	21	20	0.05	1	0	0	0	0	1	0
.................................................................................................................................................TCCAAACGATTAAAATTGAGCCCT...................................................................................................................................................................................................	24	20	0.05	1	0	0	0	0	0	1
..........................................................................................................................................................................................................................GCGCAGGAGTCAACACGTCTATGTCT........................................................................................................................	26	20	0.05	1	1	0	0	0	0	0
...........................................................................................................................................................................................................CACCGTTGAGGAAATGCGCAGGAG.........................................................................................................................................	24	20	0.05	1	1	0	0	0	0	0
.............................................................................................................................................................................................................................CAGGAGTCAACACGTCTATGTCT........................................................................................................................	23	20	0.05	1	1	0	0	0	0	0
..........................................................................................................................................................................................................CCACCGTTGAGGAAATGCGCAGG...........................................................................................................................................	23	20	0.05	1	0	0	0	0	0	1
...............................................................................................................................................................................................................................GGAGTCAACACGTCTATGTCTGATGG...................................................................................................................	26	20	0.05	1	1	0	0	0	0	0
....................................................................................................................................................AAACGATTAAAATTGAGCC.....................................................................................................................................................................................................	19	20	0.05	1	0	0	0	0	1	0
.....................A----------------------------------------------------CAAGTTGAG-ATATTCGTCCCGCCAAC.......................................................................................................................................................................................................................................................................	27	20	0.05	1	1	0	0	0	0	0
...........................................................................................TCCCGCCAACGAGTCCAGAAC............................................................................................................................................................................................................................................................	21	20	0.05	1	0	0	0	0	1	0
...........................................................................AAGTTGAG-ATATTCGTCCCGC...........................................................................................................................................................................................................................................................................	21	20	0.05	1	1	0	0	0	0	0
..............................................................................................................................................................................................................................AGGAGTCAACACGTCTATGTC.........................................................................................................................	21	20	0.05	1	1	0	0	0	0	0
.................................................................................................................................................TCCAAACGATTAAAATTGAGCCCTGTC-----------------------.........................................................................................................................................................................	27	20	0.05	1	0	0	0	0	0	1
.............................................................................................................................................................................................................................CAGGAGTCAACACGTCTATGTCTTG......................................................................................................................	25	20	0.05	1	0	1	0	0	0	0
...................................................................................................ACGAGTCCAGAACACCTGCTGGAGATAGC............................................................................................................................................................................................................................................	29	20	0.05	1	0	0	0	0	1	0
........................................................................................................................................................GATTAAAATTGAGCCCTGT.................................................................................................................................................................................................	19	20	0.05	1	1	0	0	0	0	0
.....................................................................................................................................................................................................................GAAATGCGCAGGAGTCAACACGTCTA.............................................................................................................................	26	20	0.05	1	1	0	0	0	0	0
GTTGTA---------------A----------------------------------------------------CAAGTTGAG-ATATTCGTC...............................................................................................................................................................................................................................................................................	25	20	0.05	1	1	0	0	0	0	0
.....................A----------------------------------------------------CAAGTTGAG-ATATTCGTCCCGCCA.........................................................................................................................................................................................................................................................................	25	20	0.05	1	1	0	0	0	0	0
.............................................................................................................................................................................................................................CAGGAGTCAACACGTCTATGTA.........................................................................................................................	22	20	0.05	1	0	0	0	0	1	0
................................................................................GAG-ATATTCGTCCCGCCAACGAGT...................................................................................................................................................................................................................................................................	24	20	0.05	1	0	0	0	0	1	0
.........................................................................................................................................................................................................................TGCGCAGGAGTCAACACGTCTATGTA.........................................................................................................................	26	20	0.05	1	0	0	0	0	1	0
........................................................................................TCGTCCCGCCAACGAGTCCAGAAC............................................................................................................................................................................................................................................................	24	20	0.05	1	1	0	0	0	0	0

droGri2

AG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTGGCTCTAAAAATGTTGATGGAGGTCCGCCAATCAAAAAATGGACTGGAATCAAAACGTCTAAATCGCCAGGATTCTCTGAAATTGAGACTAAAGGGCGAGAATTAATAATGGCCGCGATTTGGCAAACGAG--AGTTCGCAACCCCCTCAAATCTGAGCAGCGACTGGTCAACACAGCGATAAAAA	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
No Reads

droAna3

ACTGCA---------------G------------------------------------------------------------------------------------------------------GAAGACACACGCTGCCAACTGTTCATACGGTTGAAATTCAGCTTTGTGACATCAGGCTCGATAAAACTTACTGACGGGCCACCAGTTAAAAAATGGGATGGCGTTAGGACATCAAGGTCTGCAGGATCCTCTGAAAGAGACAATAAAGGCCGTGAGTTTATGACAGCACCAATGTGACAGAGCAG--AGTTCGCAG-CTCGTCAAATCCAAGAGCTGAGGATCCAACGGTCCGGTAAAAA	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
............................................................................................................................GAAGACACACGCTGCCAACTGTTCATA.....................................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................TTATGACAGCACCAATGTGACAGAGC.........................................................	26	13	0.15	2	0	2	0	0	0	0
..................................................................................................................................................................................................................................................................................CGTGAGTTTATGACAGCACCAATGTGAC..............................................................	28	20	0.15	3	2	1	0	0	0	0
..........................................................................................................................................................................................................................................................................................TATGACAGCACCAATGTGACAGAGCA........................................................	26	14	0.14	2	1	1	0	0	0	0
...................................................................................................................................................................................................................................TTAGGACATCAAGGTCTGCAGGATCC...............................................................................................................	26	14	0.14	2	2	0	0	0	0	0
............................................................................................................................................................................................................................................................................................TGACAGCACCAATGTGACAGAGCAG--AGT..................................................	28	14	0.14	2	1	1	0	0	0	0
..................................................................................................................................................................................................................TAAAAAATGGGATGGCGTTAGGACATC...............................................................................................................................	27	10	0.10	1	0	1	0	0	0	0
....................................................................................................................................................................................................................................TAGGACATCAAGGTCTGCAGGATCCTCT............................................................................................................	28	12	0.08	1	1	0	0	0	0	0
...................................................................................................................................................................................................................................TTAGGACATCAAGGTCTGCAGGATCCTC.............................................................................................................	28	13	0.08	1	1	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................TTATGACAGCACCAATGTGACAGAG..........................................................	25	13	0.08	1	0	1	0	0	0	0
....................................................................................................................................................................................................................................TAGGACATCAAGGTCTGCAGGATCC...............................................................................................................	25	14	0.07	1	0	1	0	0	0	0
........................................................................................................................................................................................................................................................................................TTTATGACAGCACCAATGTGACAGA...........................................................	25	14	0.07	1	1	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................TATGACAGCACCAATGTGACAGAGC.........................................................	25	14	0.07	1	0	1	0	0	0	0
...................................................................................................................................................................................................................................TTAGGACATCAAGGTCTGCAGGATC................................................................................................................	25	16	0.06	1	0	1	0	0	0	0
..................................................................................................................................................................................................................................................................................................CACCAATGTGACAGAGCAG--AGTTCGC..............................................	26	16	0.06	1	0	1	0	0	0	0
..................................................................................................................................................................................................................................................................................................CACCAATGTGACAGAGCAG--AGTTC................................................	24	16	0.06	1	1	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................CAATGTGACAGAGCAG--AGTTCGCA.............................................	24	16	0.06	1	0	0	0	0	1	0
...................................................................................................................................................................................................................................................................................................ACCAATGTGACAGAGCAG--AGTTCGCAG-...........................................	27	16	0.06	1	1	0	0	0	0	0
...................................................................................................................................................................................................................................TTAGGACATCAAGGTCTGCAGGATCCTA.............................................................................................................	28	16	0.06	1	1	0	0	0	0	0
..............................................................................................................................................................................................................................TGGCGTTAGGACATCAAGGTCTGCA.....................................................................................................................	25	17	0.06	1	1	0	0	0	0	0
................................................................................................................................................................................................................................GCGTTAGGACATCAAGGTCTGC......................................................................................................................	22	17	0.06	1	1	0	0	0	0	0
..........................................................................................................................................................................................................................................................TCCTCTGAAAGAGACAATAAAGGC..........................................................................................	24	20	0.05	1	1	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................TTATGACAGCACCAATGTGAC..............................................................	21	20	0.05	1	1	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................TTCGCAG-CTCGTCAAATCCAA.............................	21	20	0.05	1	1	0	0	0	0	0
..................................................................................................................................................................................................................................................CTGCAGGATCCTCTGAAAGAGACAATT...............................................................................................	27	20	0.05	1	1	0	0	0	0	0
...............................................................................................................................................................................................................................................................TGAAAGAGACAATAAAGGCCGTGAGT...................................................................................	26	20	0.05	1	0	0	1	0	0	0
...................................................................................................................................................................................................................................................................AGAGACAATAAAGGCCGTGAGTC..................................................................................	23	20	0.05	1	0	1	0	0	0	0
........................................................................................................................................................................................................................................ACATCAAGGTCTGCAGGATC................................................................................................................	20	20	0.05	1	0	1	0	0	0	0
................................................................................................................................................................TTCAGCTTTGTGACATCAGGCTCGA...................................................................................................................................................................................	25	20	0.05	1	1	0	0	0	0	0
.........................................................................................................................................................................................................................................CATCAAGGTCTGCAGGAT.................................................................................................................	18	20	0.05	1	0	1	0	0	0	0
..........................................................................................................................................................TTGAAATTCAGCTTTGTGACATCAGGC.......................................................................................................................................................................................	27	20	0.05	1	0	1	0	0	0	0

droBip1

GGGGCC-AAGGCAGGACCGGAGGCACGCCAT---TTGG------------------------------------------------------------------------AGCGCTGCTGGAGAAG------GTTTAGGTACTCCTCCAACCGGTTGAAGTTCAGCTTTGTGACATCAGGCTCGATAAAGCTGACTGACGGACCACCAGTTAAAAAATGAGCCGACGTCAGAACACCAAGGAATGCAGGATTTTCAGAAAGAGACAATAAGGGTCGTGAATTTATGACAGCCCCAATATGGCACAGCAG--CGTTCGCAG-CTCCTTAAATCCAAGAACTGCAGATCCGACAGCTCGGTAAAAA	Size	Hit Count	Total Norm	Total
No Reads

droKik1

G------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGGCTCGGGAAACAAGGCCAGAGGAGCAGTACCCAAGAAGTGCGCCGGTGTCAGCACATCAAGATCGCCAGGGTGTTCTGAAAGTGAGACTAAAGGACGAGAATTAATGATTGCCGCGATGTGGCAAACGAG--AGTGCGCAG-GTCATCAGCGGGCAGTACTGCAGGTCCAACAGATCGGTAGAAG	Size	Hit Count	Total Norm	Total
No Reads

droFic1

T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGACTCGATGAATGAGAATGGTGGGCCACCATTCAGAAAGTGGGCTGGCGTTAGCACATCCAGATCAGCGTGATTTTCTGAAATTGAGACTAAAGGCAGGGAGTTATCTACTGCCGAAATATGGCACAGAAG--AGTCCGCAG-CTCGTCGAAGGTCAACACTGAAGGCCCAATAGCGCGGTAGAAA	Size	Hit Count	Total Norm	Total
No Reads

droEle1

AAGGGCCAACGCATG---GGAGGTAGATTTTCATCCTTCACCAGCACTACGTCGTTGATCTTTAGCTTTCGTTC-AG----GAG----------------------------------------ACCGCCAGACGCTGCCAGTCATCCAACCAGTTATAATTGAGCTTGGTTAGATCGGGCTCAATGAT----AGTAGTAGGCCACCAAATTGGAAGTGCGCAGGTGTCAAAACATCGAGGTCATCTGGATTCTCTGAAATTGATAACAAGGGGTGAGAGTTAATGATTGACGCAATCTGACTAATCAG--AGTGCGAAG-TTCATCAAAACTTAAAGTTTGGCGGCCAACAGAGTGGTAGAAA	Size	Hit Count	Total Norm	Total
No Reads

droRho1

ACCGTG--------------------------------------------------------------------------------------------------ACCAGAAGATTTGTTGAAAATAAACAATTCTTTGCCAGCGGTCCAAACGGCTGAAGTTCAGCTTTGTGTCGTCAGGCTCAGCG-------------GAACTGTGCCAAGAAAGTGTACAGGAGTTAGCACCTCAAGGTCTGCCGGATTCTCTGAAAGAGGGAGTAAAGGTCGTGAGTTGATAACTGCCGTAATGTTGCAAACGAG--TGTAAGCAA-TTCATCGAATGATAATAAAGATGGGCCAACC--------GAAA	Size	Hit Count	Total Norm	Total
No Reads

droBia1

AGTGAG--------------------------------------------------------------------------------------------------------------------------CCACGCGTTGTTATCCATCCAAGCGTTTAAAGTTAAGACTGGTCACATCCGGCTCGACAAAAGACGAAGGCAGACCACC----AAAAAATGTGCTGGTGTTAATCCATCCAGATTAGCGGGATTTCCTGAAATCGAGACAACTGGTCAAGAATTAAAATCCGCCAAAATGTGACACACCAG--GGTCCGAAA-CTCCTCAAAGGCTAGCACAGCAGTTCCAGCAGCGCAGTAGAAA	Size	Hit Count	Total Norm	Total
No Reads

droTak1

AGTAGG--------------------------------------------------------------------------------------------------------------------------CCACGCGTTGCCATCCATCCAAGCGATTGAAGTTGAGACTGGTCACATCTGGCTCGACGAAAGATGAAGGCGGACCACCATTCAAAAAATGTGCTGGGGCTAACACATCCAGATCAGCGGGGTTTTCTGAAATCGAGACTAATGGTCGAGAATTAACAACCGCCGAAATGTGACACACCAA--GGTCCGCAA-CTCCTCAAAGGCTAAAACAGCAGTGCCAACAACGCGGTAAAAA	Size	Hit Count	Total Norm	Total
No Reads

droEug1

GCCA-----------------------------------------------------------------------------------------------------------------------------------------CCGGCTCAGACGATCGAGGCTAAGATGGG----------------------------TGTAGACCCAATGAGAATGTGTGCATTAGTCAGGACAGCGATGTCGTCTGGGTTTTCTGAAATGGGTCAGAGTGGCCGTGAGTTCAACATTACCGAAAATTCACAAACTAG--CGTTAGCAG-CTCGTGAAATGTGAGAACGGCTTTTCCATCAACGCGAACAAGG	Size	Hit Count	Total Norm	Total
No Reads

dm3

AACGAG--------------------------------------------------------------------------------------------------CCCAAAACATCTGCTGAAGGTGTGTTACTTTCTCCCATCCGTCTAAACGATTGTAGTTCAG-----TCAAGCCTGGCACTACAAGCGTCTCAGCAGGTCCGCAAAGAAGACGGCGTGCAGGGGTCAAAACATTAAGGTAGCCTGGTTTCTCTGAAATCGAAACTAAAGGCCGAGAATTAACTATTGCAGAAACTTAACACACGAG--GGTACGCAG-CTCCTCACAACTGAGAAGCGATGTTCGAACGCAGCG-AACAGA	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
.................................................................................................................................................................................................TCAGCAGGTCCGCAAAGAAGACGGCG.................................................................................................................................................	26	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0
..........................................................................................................................................................................................................................................ATTAAGGTAGCCTGGTTTCTC.............................................................................................................	21	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
...................................................................................................................................................................................................AGCAGGTCCGCAAAGAAGACG....................................................................................................................................................	21	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................AAGCGATGTTCGAACGCAGCG-......	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................AACTGAGAAGCGATGTTCGAACGCA..........	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
....................................................................................................................GCTGAAGGTGTGTTACTTT.....................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
.....G--------------------------------------------------------------------------------------------------CCCAAAACATCTGCTGAAGGTGT.............................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................AACTGAGAAGCGATGTTCGAACGCAGC........	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................TAACTATTGCAGAAACTTAACACAC..........................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................AGAAGCGATGTTCGAACGCAG.........	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................GGTCCGCAAAGAAGACGGCGTGCA.............................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................CAGCAGGTCCGCAAAGAAGACG....................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................TGGCACTACAAGCGTCTCAGC......................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................TATTGCAGAAACTTAACACACGAG--GGT..................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................TTGTAGTTCAG-----TCAAGCCTGG........................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................AGCAGGTCCGCAAAGAAGACGGCG.................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
..........................................................................................................................................CCATCCGTCTAAACGATTGTAGT...........................................................................................................................................................................................................	23	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droSim2

ACTTGCAATGCTGCT---GAAC----------------------------------------------------TAACGTTAC-ACATTCTTCCTTCTACTTAGAGCAGAATATTTACAGCAAAAACGATACGCGCTGCCACACATTCAAGCTCGTATAGTTGAGACTTATCACGTTAGGCTCACAGAAAGAATAAGGAGGA------------------------------ACATCCATATC----AGGCTCTCTGAAAGTAAATCTGAAGGTCTAGAATTAATTAAGGCTGCGATATGGCATTAAAG--AGTCCTTAA-TTAATCGAATGATAGGACTGAAGGACCCACAGCACGATAAAAA	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
........................................................................................................................................................................................................................................................................................................................................AATGATAGGACTGAAA....................	16	5	0.20	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0

droSec2

AAAGGCCATCTCATG---GGGTGTAGATTCTCATCCTTAAC--------------------------------------------------------------------------------------GAGATGCGCTGCCAAGAGTCAAGCCCATTATAGTTTAGGCCCGTTATATCCGGCTCGTCAAACGACGAAGGCGGACCACCATTGGGAAAATGCGCCGGAGTGAGGACGTCCAGATCAGCAGGGTTCTATGAAATGGGAACTAAATGTCTGGAGTTAATAACTGCCGCGATGTGGCACACCAG--CGTCCTCAG-CTCGTCGAAGGTCAGAACCGCCGTACCCACAGCGCGGTAGAAA	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
....................................................................................................................................................................................................................................................................TGGGAACTAAATGTCTGGAGTTAAT...............................................................................	25	2	0.50	1	1	0	0	0
............................................................................................................................................................................................................................................................................................................................TCAG-CTCGTCGAAGGTCAGAACCGCCG....................	27	20	0.15	3	2	0	1	0
........................................................................................................................................................................................................................................................................................................................................AAGGTCAGAACCGCCGTACCCACAGC..........	26	20	0.15	3	3	0	0	0
...................................................................................................................................TGCGCTGCCAAGAGTCAAGCC....................................................................................................................................................................................................................	21	20	0.10	2	2	0	0	0
...............................................................................................................................................................................................................................................................................................................CACCAG--CGTCCTCAG-CTCGTCGAAGG................................	26	20	0.10	2	1	0	0	1
........................................................................................................................................................................................TCAAACGACGAAGGCGGACCACC.............................................................................................................................................................	23	20	0.05	1	1	0	0	0
........................................................................................................................................................................................TCAAACGACGAAGGCGGACCAC..............................................................................................................................................................	22	20	0.05	1	1	0	0	0
............................................................................................................................................................ATAGTTTAGGCCCGTTATATC...........................................................................................................................................................................................	21	20	0.05	1	1	0	0	0
.....................................................................................................................................................................................TCGTCAAACGACGAAGGCGGACCACCAT...........................................................................................................................................................	28	20	0.05	1	0	0	1	0
..............................................................................................................................................................................................................................................................................................................................AG-CTCGTCGAAGGTCAGAACCGCCG....................	25	20	0.05	1	1	0	0	0
...................................................................................................................................TGCGCTGCCAAGAGTCAACT.....................................................................................................................................................................................................................	20	20	0.05	1	1	0	0	0
..................................................................................................................................................................................GGCTCGTCAAACGACGAAGGCGGA..................................................................................................................................................................	24	20	0.05	1	1	0	0	0
..................................................................................................................................................................................................................................................................................................................CAG--CGTCCTCAG-CTCGTCGAAGGT...............................	24	20	0.05	1	1	0	0	0
..................................................................................................................................................................................................................................................................................................................................TCGTCGAAGGTCAGAACCGCCGTACCC...............	27	20	0.05	1	1	0	0	0
.................................................................................................................................................................................................................................................................................................................................CTCGTCGAAGGTCAGAACCGCCGTACC................	27	20	0.05	1	1	0	0	0
.............................................................................................................................................................................................................................................................................................................................CAG-CTCGTCGAAGGTCAGAACCGCCGT...................	27	20	0.05	1	1	0	0	0
...............................................................................................................................................................................................................................................................................................................................................GAACCGCCGTACCCACAGCGC........	21	20	0.05	1	0	0	1	0
...............................................................................................................................................................................................................................................................................................................................G-CTCGTCGAAGGTCAGAACCGCCGA...................	25	20	0.05	1	0	0	0	1
................................................................................................................................................................................................................................................................................................................ACCAG--CGTCCTCAG-CTCGTCGAAGGT...............................	26	20	0.05	1	1	0	0	0
.......................................................................................................................................................................................GTCAAACGACGAAGGCGGACCA...............................................................................................................................................................	22	20	0.05	1	1	0	0	0
...................................................................................................................................TGCGCTGCCAAGAGTCAAGT.....................................................................................................................................................................................................................	20	20	0.05	1	1	0	0	0
...................................................................................................................................TGCGCTGCCAAGAGTCAAGC.....................................................................................................................................................................................................................	20	20	0.05	1	0	1	0	0
...........................................................................................................................................................................................................................................................................................................GGCACACCAG--CGTCCTCAG-CTCGTCGA...................................	27	20	0.05	1	0	0	0	1
.........................................................................................................................................................ATTATAGTTTAGGCCCGTTATATC...........................................................................................................................................................................................	24	20	0.05	1	1	0	0	0
............................................................................................................................................................................................................................................................................................................................TCAG-CTCGTCGAAGGTCAGAACCGCC.....................	26	20	0.05	1	1	0	0	0
............................................................................................................................................................................................................................................................................................................GCACACCAG--CGTCCTCAG-CTC........................................	21	20	0.05	1	0	0	0	1
...................................................................................................................................................................................................................................................................................................................AG--CGTCCTCAG-CTCGTCGAAGGTC..............................	24	20	0.05	1	1	0	0	0
.....................................................................................................................................................................................................................................................................................................................................TCGAAGGTCAGAACCGCCGTACCCAC.............	26	20	0.05	1	1	0	0	0

droYak3

AAAGGCCATCTCATT---GGGGGTAGATTCTCATTCTTAACAAGAACGACGTTGTCCACGGCTACGC--------------------------------------------------------------CAG--------------------------------GCTT--TGGGGTGCGGCTCGTCAAACGACGAAGGCGGACCACCATTGAGAAAATACGCCGGAGTGAGGACGTCCAGATCGGCAGGGTTCTCTGAAATGGGAACTAAAGGTCTGGAGTTAATAACTGCCGAGATGTGGCACACCAG--CGTCCTCAG-CTCGTCGAAGGTCAGAACCGCCGTACCCACAGCGCGGTAGAAA	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
.........................................................................................................................................................................................................ACCACCATTGAGAAAATACGCCGGA..........................................................................................................................................	25	3	0.33	1	0	0	0	0	0	0	0	0	0	0	1
.....................................................................................................................................................................................................................................................................................GAGTTAATAACTGCCGAGATGTGGCA.............................................................	26	20	0.15	3	0	3	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................AAGGTCAGAACCGCCGTACCCAC.............	23	20	0.15	3	0	3	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................CAAACGACGAAGGCGGAA.................................................................................................................................................................	18	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................GAGTTAATAACTGCCGAGATGTG................................................................	23	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................GTGAGGACGTCCAGATCGGCA.....................................................................................................................	21	20	0.05	1	1	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................ATGTGGCACACCAG--CGTCCTCAG-C..........................................	24	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................ATAACTGCCGAGATGTGG...............................................................	18	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................TGAGGACGTCCAGATCGGCAGGGT.................................................................................................................	24	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................AGGTCAGAACCGCCGTACCC...............	20	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................GAGTTAATAACTGCCGAGATG..................................................................	21	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0
....................................................TGTCCACGGCTACGC--------------------------------------------------------------CAG--------------------------------G.......................................................................................................................................................................................................	19	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0

droEre2

AAAGGCGACTTCATG---GGTGGCAAATTTTCGTACTTAACT-TAACCATGTCATCCTAAACAAAACCAGGCTT-GG----GAG----------------------------------------TGCGCCATACTCTTCCTTCCATCGGGA---------------------------------------------------CC-----------------------AGAAAACATCAGGATTGGCAGGGCTTTCTGAAATTAATACTAAAGGTCGAGAATTAACTACCGCAGATATGTGACAAAGAAG--GGTTCTCAG-CTCATGGAAGGTCAGTATAAAAGAGCCCACAGCACGGTAAAAG	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
No Reads

dpe_830

scaffold_158:34776-34926 +

Candidate

Unknown

Predicted structure

Flybase annnotation

Repeatable elements

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-19.4	-19.2	-19.1