ID:

dpe_826

 Coordinate:

scaffold_1540:1169-1319 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-5.6 -4.8 -4.8

Flybase annnotation

CDS [Dper\GL25369-cds]; exon [dper_GLEANR_7798:1]; intron [Dper\GL25369-in]

No Repeatable elements found

mature
  1. scaffold_183:39780-39803 +
  2. scaffold_183:48509-48532 +
  3. dpe_927  scaffold_183:73461-73484 +
  4. dpe_826  scaffold_1540:1206-1229 +
star
  1. scaffold_112:29833-29856 -
  2. scaffold_439:7732-7755 -
  3. scaffold_28:61058-61081 +
  4. scaffold_10521:963-986 +
  5. scaffold_183:39819-39842 +
  6. scaffold_183:48548-48571 +
  7. dpe_927  scaffold_183:73500-73523 +
  8. scaffold_183:77610-77633 +
  9. scaffold_192:27083-27106 +
  10. dpe_826  scaffold_1540:1245-1268 +

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CATCCGTCGAGTCGCGCAATGCAGAGGGCAACGCGATCACCACGAACGAGGTGATAGTTAAATTTGAGCCTGACACTTACTTTCTCTATTTCTCAACCAATACACGCATTCCAATATATACATGTATTAGTGAGTCTGCTTGATGTTATGCAGCAACGCGTCACAACCCTCCCGACCTTTGAGCTTTTCTGCGCGTAATAAGAATCTGAAAAAACTCCCAAAAACCATATCTATTATCTCTCTTCTTCTTC
***************************************************************************************....(((.((.((((((...((........))...)))))).)))))................***************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 M021
embryo
 V050
head
 V057
head
 V111
male body		 V042
embryo
...................TGCAGAGGGCAACGCGATCACCA................................................................................................................................................................................................................. 23 0 8 1.00 8 8 0 0 0 0 0
...................TGCAGAGGGCAACGCGATCAC................................................................................................................................................................................................................... 21 0 8 0.75 6 6 0 0 0 0 0
...................TGCAGAGGGCAACGCGATCA.................................................................................................................................................................................................................... 20 0 8 0.63 5 4 0 0 1 0 0
...................TGCAGAGGGCAACGCGATCACC.................................................................................................................................................................................................................. 22 0 8 0.63 5 5 0 0 0 0 0
.......CGAGTCGCGCAATGCAGAG................................................................................................................................................................................................................................. 19 0 10 0.50 5 1 4 0 0 0 0
...................TGCAGAGGGCAACGCGATCAA................................................................................................................................................................................................................... 21 1 8 0.25 2 2 0 0 0 0 0
.......................................................................................ATTTCTCAACCAATACACGCATTC............................................................................................................................................ 24 0 4 0.25 1 1 0 0 0 0 0
...................TGCAGAGGGCAACGCGATC..................................................................................................................................................................................................................... 19 0 8 0.25 2 1 0 0 0 1 0
......................................................................................TATTTCTCGACCAATACACGCATTC............................................................................................................................................ 25 1 4 0.25 1 1 0 0 0 0 0
..TCCGTCGAGTCGCGCAATGCAGAGG................................................................................................................................................................................................................................ 25 0 10 0.20 2 2 0 0 0 0 0
CATCCGTCGAGTCGCGCAATGCAGAGGGC.............................................................................................................................................................................................................................. 29 0 10 0.20 2 0 2 0 0 0 0
..............................................................................................................................TTAGTGAGTCTGCTTGATGTTATG..................................................................................................... 24 0 10 0.20 2 2 0 0 0 0 0
...............................................................................................................................TAGTGAGTCTGCTTGATGTTATG..................................................................................................... 23 0 10 0.20 2 2 0 0 0 0 0
..........................................................................................................................................................................................TTCTGCGCGTAATAAGAATCTGAAA........................................ 25 0 6 0.17 1 0 1 0 0 0 0
.............................................................................................................................................................GCGTCACAACCCTCCCGAC........................................................................... 19 0 6 0.17 1 1 0 0 0 0 0
.........................................................................................................................................................................................TTTCTGCGCGTAATAAGAATCTGAAA........................................ 26 0 6 0.17 1 1 0 0 0 0 0
.............................................................................................................................................................................................TGCGCGTAATAAGAATCTGAAAAACC.................................... 26 1 6 0.17 1 1 0 0 0 0 0
.........................................................................................................................................................................................TTTCTGCGAGTAATAAGAATCTGAAA........................................ 26 1 6 0.17 1 1 0 0 0 0 0
....................................................................................................................TATACATGTATTAGTGAGTCTGCTTG............................................................................................................. 26 0 6 0.17 1 1 0 0 0 0 0
.......................................................................................................................................................AGCAACGCGTCACAACCCTCCCGACC.......................................................................... 26 0 6 0.17 1 1 0 0 0 0 0
.........................................................................................................................................................................................TTTCTGCGCGTAATAAGAATCTGAA......................................... 25 0 6 0.17 1 1 0 0 0 0 0
.........................................................................................................................................................................................TTTCTGCGCGTAATAAGAATCTGA.......................................... 24 0 6 0.17 1 1 0 0 0 0 0
............................................................................................................................................................................................CTGCGCGTAATAAGAATCTGAA......................................... 22 0 6 0.17 1 1 0 0 0 0 0
..................................................................................................................................................................................................................................TTATCTATTATCTCTCTTCT..... 20 1 7 0.14 1 1 0 0 0 0 0
................................................................................................................................................................TCACAACCCTCCCGACCTT........................................................................ 19 0 7 0.14 1 1 0 0 0 0 0
...................TGCAGAGGGCCACGCGATCACCAAAA.............................................................................................................................................................................................................. 26 3 8 0.13 1 0 0 0 0 0 1
....................GCAGAGGGCAACGCGATAA.................................................................................................................................................................................................................... 19 1 8 0.13 1 1 0 0 0 0 0
...................TGCAGAGGGCAACGCGAA...................................................................................................................................................................................................................... 18 1 8 0.13 1 1 0 0 0 0 0
................CAATGCAGAGGGCAACGCGA....................................................................................................................................................................................................................... 20 0 8 0.13 1 0 0 0 0 1 0
....................GCAGAGGGCAACGCGATCACCA................................................................................................................................................................................................................. 22 0 8 0.13 1 1 0 0 0 0 0
...................TGCAGAGGGCAACGCGAAAA.................................................................................................................................................................................................................... 20 2 8 0.13 1 1 0 0 0 0 0
....................GCAGAGGGCAACGCGATCACCAAAA.............................................................................................................................................................................................................. 25 2 8 0.13 1 1 0 0 0 0 0
...................TGCAGAGGGCAACGCGAT...................................................................................................................................................................................................................... 18 0 8 0.13 1 1 0 0 0 0 0
....................GCAGAGGGCAACGCGATCAC................................................................................................................................................................................................................... 20 0 8 0.13 1 1 0 0 0 0 0
...................TGCAGAGGGCAACGCGATCACA.................................................................................................................................................................................................................. 22 1 8 0.13 1 1 0 0 0 0 0
....................GCAGAGGGCAACGCGATCAAAA................................................................................................................................................................................................................. 22 2 8 0.13 1 1 0 0 0 0 0
..............................................................TTTGAGACTGACACTAACGTTC....................................................................................................................................................................... 22 3 9 0.11 1 0 0 0 1 0 0
......................................................TAGTTAAATTTGAGCCTGACACTTACT.......................................................................................................................................................................... 27 0 9 0.11 1 1 0 0 0 0 0
......................................................TAGTTAAAGTTGAGCCTGACACTTACT.......................................................................................................................................................................... 27 1 9 0.11 1 1 0 0 0 0 0
......................................................TAGTTAAATTTGAGCCTGACACTTACTT......................................................................................................................................................................... 28 0 9 0.11 1 1 0 0 0 0 0
......................................................GAGTTAAATTTGAGCCTGACACT.............................................................................................................................................................................. 23 1 9 0.11 1 1 0 0 0 0 0
......................................................TAGTTAAATTTGAGCCTGACACT.............................................................................................................................................................................. 23 0 9 0.11 1 1 0 0 0 0 0
...................................................TGATAGTTAAATTTGAGCCTG................................................................................................................................................................................... 21 0 10 0.10 1 1 0 0 0 0 0
CATCCGTCGAGTCGCGCAATGCAGT.................................................................................................................................................................................................................................. 25 1 10 0.10 1 1 0 0 0 0 0
......................................................TAGTTAAATTTGAGCCTG................................................................................................................................................................................... 18 0 10 0.10 1 1 0 0 0 0 0
.......CGAGTCGCGCAATGCAGAGGG............................................................................................................................................................................................................................... 21 0 10 0.10 1 0 0 0 1 0 0
..TCCGTCGAGGCGCGCAATGCAGAGG................................................................................................................................................................................................................................ 25 1 10 0.10 1 0 1 0 0 0 0
..TCCGTCGAGTCGCGCAATGCAGAGGG............................................................................................................................................................................................................................... 26 0 10 0.10 1 1 0 0 0 0 0
........GAGTCGCGCAATGCAGAGGGCAACG.......................................................................................................................................................................................................................... 25 0 10 0.10 1 1 0 0 0 0 0
.ATCCGTCGAGTCGCGCAATGCAG................................................................................................................................................................................................................................... 23 0 10 0.10 1 0 1 0 0 0 0
...................TGCAGAGGGCAACGCGATAAAA.................................................................................................................................................................................................................. 22 3 10 0.10 1 1 0 0 0 0 0
..TCCGTCGAGTCGCGCAATGCAGAG................................................................................................................................................................................................................................. 24 0 10 0.10 1 1 0 0 0 0 0
..TCCGTCGAGTCGCGCAATGCA.................................................................................................................................................................................................................................... 21 0 10 0.10 1 0 0 1 0 0 0
.....GTCGAGTCACGCAATGCAGAGGGC.............................................................................................................................................................................................................................. 24 1 10 0.10 1 1 0 0 0 0 0
.......CGAGTCGCGCAATGCAGAGGGCAAC........................................................................................................................................................................................................................... 25 0 10 0.10 1 1 0 0 0 0 0
..TCCGTCGAGTCGCGCAATGC..................................................................................................................................................................................................................................... 20 0 10 0.10 1 0 0 1 0 0 0
..TCCGTCGAGTCGCGCCATG...................................................................................................................................................................................................................................... 19 1 10 0.10 1 0 0 0 0 0 1
..TCCGTCGAGTCGCGCAATGCAGAGGGC.............................................................................................................................................................................................................................. 27 0 10 0.10 1 1 0 0 0 0 0
....CGTCGAGTCGCGCAATGCTT................................................................................................................................................................................................................................... 20 2 10 0.10 1 0 0 1 0 0 0
..........................................................................................................................TGTATTAGTGAGTCTGCTTGA............................................................................................................ 21 0 13 0.08 1 0 0 1 0 0 0
........GAGGCGCGCAATGCTGAG................................................................................................................................................................................................................................. 18 2 15 0.07 1 0 0 0 1 0 0
.....................................................................................CTATTTCTCGGCCAATGCAC.................................................................................................................................................. 20 3 15 0.07 1 0 0 1 0 0 0

Anti-sense strand reads

GTAGGCAGCTCAGCGCGTTACGTCTCCCGTTGCGCTAGTGGTGCTTGCTCCACTATCAATTTAAACTCGGACTGTGAATGAAAGAGATAAAGAGTTGGTTATGTGCGTAAGGTTATATATGTACATAATCACTCAGACGAACTACAATACGTCGTTGCGCAGTGTTGGGAGGGCTGGAAACTCGAAAAGACGCGCATTATTCTTAGACTTTTTTGAGGGTTTTTGGTATAGATAATAGAGAGAAGAAGAAG
*****************************************************************************************************....(((.((.((((((...((........))...)))))).)))))................*************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 V057
head
 M021
embryo
 V042
embryo
......AGCTCAGCGCGTTACGTCTCCCG.............................................................................................................................................................................................................................. 23 0 10 0.40 4 4 0 0 0
....GCAGCTCAGCGCGTTACGTCTCCCG.............................................................................................................................................................................................................................. 25 0 10 0.30 3 2 0 1 0
.AAGGCAGCTCAGCGCGTTAC...................................................................................................................................................................................................................................... 20 1 10 0.30 3 0 0 3 0
.....................................................................................................TGTGTGCAAGGTTATATATGT................................................................................................................................. 21 2 4 0.25 1 0 1 0 0
.......GCTCAGCGCGTTACGTCTCCCG.............................................................................................................................................................................................................................. 22 0 10 0.20 2 2 0 0 0
......................................................................................................................................................................................................................GTGGGTTGTTGGTATAGAT.................. 19 2 5 0.20 1 0 1 0 0
.....................................................................................................................................................CGTCGTTGCGCAGTGTTGGGA................................................................................. 21 0 6 0.17 1 1 0 0 0
..............................................................................................................................................................................TGGAAACTCGAAAAGACGCGCATT..................................................... 24 0 6 0.17 1 1 0 0 0
.........................................................................................................................................................................................AAAGACGCGCATTATTCTTAGAC........................................... 23 0 6 0.17 1 1 0 0 0
............................................................................................................................................................................................GACGCGCATTATTCTTAGACT.......................................... 21 0 6 0.17 1 1 0 0 0
..............................................................................................................................................................................................CGCGCATTATTCTTAGACTTT........................................ 21 0 6 0.17 1 1 0 0 0
................GTTACGTCTCCCGTTGCGCTAGT.................................................................................................................................................................................................................... 23 0 8 0.13 1 1 0 0 0
.........TCAGCGCGTTACGTCTCCCGTTGCGCT....................................................................................................................................................................................................................... 27 0 8 0.13 1 1 0 0 0
.........TCAGCGCGTTACGTCTCCGGTTGCGCT....................................................................................................................................................................................................................... 27 1 8 0.13 1 1 0 0 0
..................TACGTCTCCCGTGGCGCTATT.................................................................................................................................................................................................................... 21 2 8 0.13 1 1 0 0 0
..........CAGCGCGTTACGTCTCCCGTTGCGCT....................................................................................................................................................................................................................... 26 0 8 0.13 1 1 0 0 0
..........CAGCGCGTTACGTCTCCCGTTGCGC........................................................................................................................................................................................................................ 25 0 8 0.13 1 1 0 0 0
............GCGCGTTACGTCTCCCGTTGCGCT....................................................................................................................................................................................................................... 24 0 8 0.13 1 1 0 0 0
..........CAGCGCGTTACGTCTCCCGTT............................................................................................................................................................................................................................ 21 0 10 0.10 1 1 0 0 0
..AGGCAGCTCAGCGCGTTACGTCTCCCGT............................................................................................................................................................................................................................. 28 0 10 0.10 1 1 0 0 0
.....CAGCTCAGCGCGTTACGTCTCCCG.............................................................................................................................................................................................................................. 24 0 10 0.10 1 1 0 0 0
.......GCTGAGCGCGTTACGTCTCCCGT............................................................................................................................................................................................................................. 23 1 10 0.10 1 0 0 0 1
...GGCAGCTCAGCGCGTTACGTCTCCCG.............................................................................................................................................................................................................................. 26 0 10 0.10 1 1 0 0 0
GTAGGCAGCTCAGCGCGTTACGT.................................................................................................................................................................................................................................... 23 0 10 0.10 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_1540:1119-1369 + dpe_826 CATCCGTCGAGTCGCGCAATGCAGAGGGCAACGCGATCACCACGAACGAGGTGATAGTTAAATTTGAGCCTGACACTTACTTTCTCTATTTCTCAACCAATACACGCATTCCAATATATACATGTATTAG-----TGAGTCTGCTTGATGTTA-TGCAGCAACGCGTCACAACCCTCCCGACCTTTGAGCTTTTCTGCGCGTAATAAGAATCTGAAAAAACTCCCAAAAACCATATCTATTATCTCTCTTCTTCTTC
dp5 Unknown_singleton_1734:938-1188 - GACCCGTCGAGTCGCGCAATGCAGAGGGCAACGCGATCACCACGAACGACGTGATAGTTAAATTTGAGCCTGACACTTACTTTCTCTATTTCTCAACCAATACACACATTCTAATATATACATGTATTAG-----TGAGTCTGCTTGATGTTA-TGCAGCAACGCGTCACAACCCTCCCGACCTTTGAGCTTTTCTGCGCGTAATAAGAATCTGAAAAAACTCCCAAAAACCATATCTATTATCTCTCTTCTTCTTC
droWil2 scf2_1100000000848:14-68 - A---------------------------------------------------------------------------------------TCTCCCAGTTGGTACGTGTAACTAAGTATATACATGTGTGTG-----TGTGTGTGTTTG--------------------------------------------------------------------------------------------------------------
droEle1 scf7180000490918:1965-2182 + G--------------------TTGAAAACTATACAGCCACCAC--TCGATAATATAAGCAAACGCAATCCCTATAATTCCGTCACCT---------------GACCCACACTAAGATTAACTTAGTCGAGTCAGCTGAGGCTGCCTGATGTTGCTGCAGCAGCGCGTCACAACCCTCCCGACCATTGAGCTTTTCTACACGCATAATTTAATTGAA-AAACTCCCTAACG-CAAATGTTTTTTACTCCTTCTTTCTC
droRho1 scf7180000767161:149-198 - A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAATAT--AAAAATCTACAAAAATTATATATATTTTTCTCCTACTTCTTC
droEug1 scf7180000408899:14046-14099 + T----------------------------------------------------------------------GACAATAGCATTTTCTGGTTTACAACCATCACAAGCATTCCGAGAAACATATG-------------------------------------------------------------------------------------------------------------------------------------
droYak3 v2_chrUn_008:106631-106672 + A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAACCGCCAAAAACTGTGTTTAATACTCTTCTTCTCCCTT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
CATCCGTCGAGTCGCGCAATGCAGAGGGCAACGCGATCACCACGAACGAGGTGATAGTTAAATTTGAGCCTGACACTTACTTTCTCTATTTCTCAACCAATACACGCATTCCAATATATACATGTATTAG-----TGAGTCTGCTTGATGTTA-TGCAGCAACGCGTCACAACCCTCCCGACCTTTGAGCTTTTCTGCGCGTAATAAGAATCTGAAAAAACTCCCAAAAACCATATCTATTATCTCTCTTCTTCTTCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...................TGCAGAGGGCAACGCGATCACCA.......................................................................................................................................................................................................................2381.008080000
...................TGCAGAGGGCAACGCGATCAC.........................................................................................................................................................................................................................2180.756060000
...................TGCAGAGGGCAACGCGATCA..........................................................................................................................................................................................................................2080.635040010
...................TGCAGAGGGCAACGCGATCACC........................................................................................................................................................................................................................2280.635050000
.......CGAGTCGCGCAATGCAGAG.......................................................................................................................................................................................................................................19100.505410000
...................TGCAGAGGGCAACGCGATCAA.........................................................................................................................................................................................................................2180.252020000
.......................................................................................ATTTCTCAACCAATACACGCATTC..................................................................................................................................................2440.251010000
...................TGCAGAGGGCAACGCGATC...........................................................................................................................................................................................................................1980.252010001
..TCCGTCGAGTCGCGCAATGCAGAGG......................................................................................................................................................................................................................................25100.202020000
CATCCGTCGAGTCGCGCAATGCAGAGGGC....................................................................................................................................................................................................................................29100.202200000
..............................................................................................................................TTAG-----TGAGTCTGCTTGATGTTA-TG.....................................................................................................24100.202020000
...............................................................................................................................TAG-----TGAGTCTGCTTGATGTTA-TG.....................................................................................................23100.202020000
................................................................................................................................................................................................TTCTGCGCGTAATAAGAATCTGAAA........................................2560.171100000
...................................................................................................................................................................GCGTCACAACCCTCCCGAC...........................................................................1960.171010000
...............................................................................................................................................................................................TTTCTGCGCGTAATAAGAATCTGAAA........................................2660.171010000
....................................................................................................................TATACATGTATTAG-----TGAGTCTGCTTG..............................................................................................................2660.171010000
.............................................................................................................................................................AGCAACGCGTCACAACCCTCCCGACC..........................................................................2660.171010000
...............................................................................................................................................................................................TTTCTGCGCGTAATAAGAATCTGAA.........................................2560.171010000
...............................................................................................................................................................................................TTTCTGCGCGTAATAAGAATCTGA..........................................2460.171010000
..................................................................................................................................................................................................CTGCGCGTAATAAGAATCTGAA.........................................2260.171010000
......................................................................................................................................................................TCACAACCCTCCCGACCTT........................................................................1970.141010000
...................TGCAGAGGGCAACGCGAA............................................................................................................................................................................................................................1880.131010000
................CAATGCAGAGGGCAACGCGA.............................................................................................................................................................................................................................2080.131000001
....................GCAGAGGGCAACGCGATCACCA.......................................................................................................................................................................................................................2280.131010000
...................TGCAGAGGGCAACGCGAT............................................................................................................................................................................................................................1880.131010000
....................GCAGAGGGCAACGCGATCAC.........................................................................................................................................................................................................................2080.131010000
...................TGCAGAGGGCAACGCGATCACA........................................................................................................................................................................................................................2280.131010000
......................................................TAGTTAAATTTGAGCCTGACACTTACT................................................................................................................................................................................2790.111010000
......................................................TAGTTAAATTTGAGCCTGACACTTACTT...............................................................................................................................................................................2890.111010000
......................................................TAGTTAAATTTGAGCCTGACACT....................................................................................................................................................................................2390.111010000
...................................................TGATAGTTAAATTTGAGCCTG.........................................................................................................................................................................................21100.101010000
CATCCGTCGAGTCGCGCAATGCAGT........................................................................................................................................................................................................................................25100.101010000
......................................................TAGTTAAATTTGAGCCTG.........................................................................................................................................................................................18100.101010000
.......CGAGTCGCGCAATGCAGAGGG.....................................................................................................................................................................................................................................21100.101000010
..TCCGTCGAGTCGCGCAATGCAGAGGG.....................................................................................................................................................................................................................................26100.101010000
........GAGTCGCGCAATGCAGAGGGCAACG................................................................................................................................................................................................................................25100.101010000
.ATCCGTCGAGTCGCGCAATGCAG.........................................................................................................................................................................................................................................23100.101100000
..TCCGTCGAGTCGCGCAATGCAGAG.......................................................................................................................................................................................................................................24100.101010000
..TCCGTCGAGTCGCGCAATGCA..........................................................................................................................................................................................................................................21100.101000100
.......CGAGTCGCGCAATGCAGAGGGCAAC.................................................................................................................................................................................................................................25100.101010000
..TCCGTCGAGTCGCGCAATGC...........................................................................................................................................................................................................................................20100.101000100
..TCCGTCGAGTCGCGCAATGCAGAGGGC....................................................................................................................................................................................................................................27100.101010000
....CGTCGAGTCGCGCAATGCTT.........................................................................................................................................................................................................................................20100.101000100
..........................................................................................................................TGTATTAG-----TGAGTCTGCTTGA.............................................................................................................21130.081000100
dp5
GACCCGTCGAGTCGCGCAATGCAGAGGGCAACGCGATCACCACGAACGACGTGATAGTTAAATTTGAGCCTGACACTTACTTTCTCTATTTCTCAACCAATACACACATTCTAATATATACATGTATTAG-----TGAGTCTGCTTGATGTTA-TGCAGCAACGCGTCACAACCCTCCCGACCTTTGAGCTTTTCTGCGCGTAATAAGAATCTGAAAAAACTCCCAAAAACCATATCTATTATCTCTCTTCTTCTTCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
......................................................................................TATTTCTCAACCAATACACACATTC..................................................................................................................................................2529.501901630000000
.......................................................................................ATTTCTCAACCAATACACACATTC..................................................................................................................................................2421.5030300000000
........................................................................................TTTCTCAACCAATACACACAT....................................................................................................................................................2121.5030000000300
....................................................................................TCTATTTCTCAACCAATACAC........................................................................................................................................................2131.0030000000300
...................................................TGATAGTTAAATTTGAGCCTG.........................................................................................................................................................................................2131.0030200001000
...................................................TGATAGTTAAATTTGAGCCTGACA......................................................................................................................................................................................2421.0020000000200
.....................................................ATAGTTAAATTTGAGCCTGAC.......................................................................................................................................................................................2121.0020200000000
..........................................................................................TCTCAACCAATACACACATTCTAATA.............................................................................................................................................2621.0020200000000
...................................................TGATAGTTAAATTTGAGCCTGACAC.....................................................................................................................................................................................2521.0020000000020
...................TGCAGAGGGCAACGCGATCACCA.......................................................................................................................................................................................................................2331.0030300000000
.........AGTCGCGCAATGCAGAGGGC....................................................................................................................................................................................................................................2041.0040300001000
...................TGCAGAGGGCAACGCGATCA..........................................................................................................................................................................................................................2031.0030300000000
.........AGTCGCGCAATGCAGAGGGCA...................................................................................................................................................................................................................................2140.7530200001000
......TCGAGTCGCGCAATGCAGAGGGC....................................................................................................................................................................................................................................2340.7530000000300
.......................................................................................................................................TGAGTCTGCTTGATGTTA-TGC....................................................................................................2130.6720200000000
........................................................GTTAAATTTGAGCCTGACACT....................................................................................................................................................................................2120.5011000000000
......................................................................................TATTTCTCAACCAATACACACATTCTAA...............................................................................................................................................2820.5010100000000
................................................................................................................................................TTGATGTTA-TGCAGCAACGC............................................................................................2020.5010100000000
.........................................................................................................................ATGTATTAG-----TGAGTCTGCTTG..............................................................................................................2140.5020100000001
......TCGAGTCGCGCAATGCAGAGGGCAACG................................................................................................................................................................................................................................2740.5020000000200
....................GCAGAGGGCAACGCGATCACCACGAAC..................................................................................................................................................................................................................2720.5010100000000
...................TGCAGAGGGCAACGCGATCACCACGAA...................................................................................................................................................................................................................2720.5010100000000
............................................................................................................................................................................................................TAAGAATCTGAAAAAACTCCCAAAAAC..........................2720.5010100000000
................................................................TGAGCCTGACACTTACTTTCTCTATTTC.....................................................................................................................................................................2820.5010100000000
...................TGCAGAGGGCAACGCGATCACCACGA....................................................................................................................................................................................................................2620.5010100000000
......................................................................................TATTTCTCAACCAATACACACATT...................................................................................................................................................2420.5010100000000
...............................CGCGATCACCACGAACGACGTT............................................................................................................................................................................................................2220.5010100000000
...........................................................................................CTCAACCAATACACACATTC..................................................................................................................................................2020.5010100000000
............................................................................................................................................................................CCCTCCCGACCTTTGAGCTTTTC..............................................................2320.5010100000000
.................................................................................................................................................................................................TCTGCGCGTAATAAGAATCTG...........................................2140.5020000000200
......................................................................................TATTTCTCAACCAATACACACATC...................................................................................................................................................2420.5010010000000
................CAATGCAGAGGGCAACGCGATCACC........................................................................................................................................................................................................................2530.3310100000000
...................TGCAGAGGGCAACGCGATC...........................................................................................................................................................................................................................1930.3310100000000
.................................................................................................................................................................ACGCGTCACAACCCTCCCGAC...........................................................................2130.3310100000000
....................................................................................................................................................................................................................TGAAAAAACTCCCAAAAACCATATCTA..................2730.3310000000100
...................TGCAGAGGGCAACGCGATCAC.........................................................................................................................................................................................................................2130.3310100000000
....................................................GATAGTTAAATTTGAGCCTG.........................................................................................................................................................................................2030.3310100000000
....................GCAGAGGGCAACGCGATCAAA........................................................................................................................................................................................................................2130.3310100000000
................CAATGCAGAGGGCAACGCGA.............................................................................................................................................................................................................................2030.3310000001000
.............................................................................................................................................................AGCAACGCGTCACAACCCTC................................................................................2030.3310100000000
...................TGCAGAGGGCAACGCGATCACC........................................................................................................................................................................................................................2230.3310100000000
....................GCAGAGGGCAACGCGATCACC........................................................................................................................................................................................................................2130.3310100000000
..............................................................TTTGAGCCTGACACTTACTT...............................................................................................................................................................................2030.3310100000000
..................................................................................................................................................................................................CTGCGCGTAATAAGAATCTGAAAAAA.....................................2630.3310100000000
.............................................................................................................................................................AGCAACGCGTCACAACCCTCC...............................................................................2130.3310100000000
....................GCAGAGGGCAACGCGATCAC.........................................................................................................................................................................................................................2030.3310100000000
......................................................................................................................................................................TCACAACCCTCCCGACCTTTG......................................................................2130.3310100000000
...................TGCAGAGGGCAACGCGATCAA.........................................................................................................................................................................................................................2130.3310100000000
...CCGTCGAGTCGCGCAATGCAGAGGGC....................................................................................................................................................................................................................................2640.2510100000000
......TCGAGTCGCGCAATGCAGA........................................................................................................................................................................................................................................1940.2510001000000
................................................................................................................................................................................................TTCTGCGCGTAATAAGAATCTGAA.........................................2440.2510100000000
..........................................................................................................................TGTATTAG-----TGAGTCTGCTTGA.............................................................................................................2140.2510100000000
......TCGAGTCGCGCAATGCAGAGGGCAAA.................................................................................................................................................................................................................................2640.2510100000000
.......CGAGTCGCGCAATGCAGAGGGCAACGC...............................................................................................................................................................................................................................2740.2510000000010
...........................................................................................................................................................................................AGCTTTTCTGCGCGTAATAAGAATCTG...........................................2740.2510100000000
..........GTCGCGCAATGCAGAGGGC....................................................................................................................................................................................................................................1940.2510100000000
..........GTCGCGCAATGCAGAGGGCAA..................................................................................................................................................................................................................................2140.2510100000000
...........TCGCGCAATGCAGAGGGCAAC.................................................................................................................................................................................................................................2140.2510100000000
..................................................................................................................................................................................................CTGCGCGTAATAAGAATCTGA..........................................2140.2510000000010
.......CGAGTCGCGCAATGCAGAGGG.....................................................................................................................................................................................................................................2140.2510100000000
..............................................................................................................................................................................................................AGAATCTGAAAAAACTCCCAAA.............................2240.2510100000000
.............GCGCAATGCAGAGGGCAACGTT..............................................................................................................................................................................................................................2240.2510100000000
............CGCGCAATGCAGAGGGCAACG................................................................................................................................................................................................................................2140.2510000000010
..............................................................................................................................................................................................TTTTCTGCGCGTAATAAGAATCTGA..........................................2540.2510000000100
.............................................................................................................................................................................................CTTTTCTGCGCGTAATAAGAA...............................................2140.2510100000000
droWil2
A---------------------------------------------------------------------------------------TCTCCCAGTTGGTACGTGTAACTAAGTATATACATGTGTGTG-----TGTGTGTGTTTG--------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droEle1
G--------------------TTGAAAACTATACAGCCACCAC--TCGATAATATAAGCAAACGCAATCCCTATAATTCCGTCACCT---------------GACCCACACTAAGATTAACTTAGTCGAGTCAGCTGAGGCTGCCTGATGTTGCTGCAGCAGCGCGTCACAACCCTCCCGACCATTGAGCTTTTCTACACGCATAATTTAATTGAA-AAACTCCCTAACG-CAAATGTTTTTTACTCCTTCTTTCTCSizeHit CountTotal NormTotal
No Reads
droRho1
A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAATAT--AAAAATCTACAAAAATTATATATATTTTTCTCCTACTTCTTCSizeHit CountTotal NormTotal
No Reads
droEug1
T----------------------------------------------------------------------GACAATAGCATTTTCTGGTTTACAACCATCACAAGCATTCCGAGAAACATATG-------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droYak3
A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAACCGCCAAAAACTGTGTTTAATACTCTTCTTCTCCCTTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads

Generated: 06/08/2015 at 03:17 PM