ID:

dpe_820

 Coordinate:

scaffold_152:23035-23185 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-17.2 -17.0 -16.4 -16.3

Flybase annnotation

CDS [Dper\GL21036-cds]; exon [dper_GLEANR_2951:4]; intron [Dper\GL21036-in]

Repeatable elements

NameClassFamilyStrand
Nobel_I-intLTRPao-
mature
  1. scaffold_79:139878-139903 -
  2. scaffold_57:219964-219989 -
  3. scaffold_140:45365-45390 -
  4. scaffold_123:18521-18546 -
  5. scaffold_123:69861-69886 -
  6. scaffold_124:11755-11780 -
  7. dpe_820  scaffold_152:23125-23150 -
  8. scaffold_143:63988-64013 -
  9. scaffold_3260:1423-1448 -
  10. scaffold_532:7148-7173 -
  11. scaffold_563:3808-3833 -
  12. scaffold_1940:3269-3294 -
  13. scaffold_1928:3006-3031 -
  14. scaffold_121:5318-5343 -
  15. scaffold_276:5436-5461 -
  16. scaffold_8366:171-196 -
  17. scaffold_9439:380-405 -
  18. scaffold_575:4273-4298 -
  19. scaffold_691:1096-1121 -
  20. scaffold_695:8958-8983 -
star
  1. scaffold_43:32519-32538 -
  2. scaffold_43:39435-39454 -
  3. scaffold_57:219918-219937 -
  4. scaffold_268:10488-10507 -
  5. dpe_820  scaffold_152:23079-23098 -
  6. scaffold_143:63942-63961 -
  7. scaffold_3260:1377-1396 -
  8. scaffold_532:7102-7121 -
  9. scaffold_1465:982-1001 -
  10. scaffold_1861:2264-2283 -
  11. scaffold_1861:3979-3998 -
  12. scaffold_4466:213-232 -
  13. scaffold_1940:3223-3242 -
  14. scaffold_1928:2960-2979 -
  15. scaffold_121:5272-5291 -
  16. scaffold_276:5390-5409 -
  17. scaffold_2501:489-508 -
  18. scaffold_8366:125-144 -
  19. scaffold_575:4227-4246 -
  20. scaffold_695:8912-8931 -

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TGGGACTGGACCAGCCCCATTCTTAGCTATCCGGTGTTTGAAAAGGTTGAGTGAGTCTGCGAAGCTCTCATTCCCTAGAGCTGCTAACGTTATTGGGTCCGACTTTTACGTCGATGACTTGTTGACTGGTGCTGCATGCGTAGAGGAGCTAAGGGCAATTAAGTCCGAAGTGTCTCAGGTTCTTCAGACCGCAGGGTTTGAGTTGACTAAGTGGTTTTCAAATTCACCCGAGATCACCGCATCTGAGAGCA
*************************************************************************************...((....((.(((....((((((.((.((....((........))..))))))))))))).))....)).********************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 V111
male body		 V057
head
..............................CCGGTGTTTGAAAAGGTTGAGTGAG.................................................................................................................................................................................................... 25 0 20 0.10 2 2 0 0
.....................................................................................AACGTTATTGGGTCCGACTTTTACGT............................................................................................................................................ 26 0 20 0.10 2 2 0 0
.........................................................................................................................................GCGTAGAGGAGCTAAGGGCA.............................................................................................. 20 0 20 0.10 2 0 2 0
............................................................................................................................ACTGGTGCTGCATGCGTAGA........................................................................................................... 20 0 20 0.05 1 1 0 0
.......................................GAAAAGGTTGAGTGAGTCTGC............................................................................................................................................................................................... 21 0 20 0.05 1 0 1 0
....................................TTTGAAAAGGTTGAGTGAGTC.................................................................................................................................................................................................. 21 0 20 0.05 1 1 0 0
..................................................................................................................................................................GTCCGAAGTGTCTCAGGTTCT.................................................................... 21 0 20 0.05 1 1 0 0
........................................AAAAGGTTGAGTGAGTCTGC............................................................................................................................................................................................... 20 0 20 0.05 1 0 1 0
........................................................................................................................GTTGACTGGTGCTGCATGCGTAGAGG......................................................................................................... 26 0 20 0.05 1 1 0 0
....................................................................................TAACGTTATTGGGTCCGACTTTTACGT............................................................................................................................................ 27 0 20 0.05 1 1 0 0
...............................CGGTGTTTGAAAAGGTTGAGTGAGTC.................................................................................................................................................................................................. 26 0 20 0.05 1 1 0 0
.........................GCTATCCGGTGTTTGAAAAG.............................................................................................................................................................................................................. 20 0 20 0.05 1 0 1 0
.........................................................................................................................TTGACTGGGGCTGCATGCGTAG............................................................................................................ 22 1 20 0.05 1 1 0 0
........................................................................................................................................................................................CAGACCGCAGGGTTTGAGTTGACTAA......................................... 26 0 20 0.05 1 1 0 0
............................................................................................................................................................................................................................GATTCACCCGAACTCACCG............ 19 3 20 0.05 1 0 0 1
.............................TCCGGTGTTTGAAAAGGTTGA......................................................................................................................................................................................................... 21 0 20 0.05 1 1 0 0
....................................................................CATTCCCTAGAGCTGCTAACGTTAT.............................................................................................................................................................. 25 0 20 0.05 1 1 0 0
.................................................................................TGCTAACGTTATTGGGTCCGACTTT................................................................................................................................................. 25 0 20 0.05 1 1 0 0
.....................................TTGAAAAGGTTGAGTGAGTCTGC............................................................................................................................................................................................... 23 0 20 0.05 1 1 0 0
.............................TCCGGTGTTTGAAAAGGTTGAGTGA..................................................................................................................................................................................................... 25 0 20 0.05 1 1 0 0

Anti-sense strand reads

ACCCTGACCTGGTCGGGGTAAGAATCGATAGGCCACAAACTTTTCCAACTCACTCAGACGCTTCGAGAGTAAGGGATCTCGACGATTGCAATAACCCAGGCTGAAAATGCAGCTACTGAACAACTGACCACGACGTACGCATCTCCTCGATTCCCGTTAATTCAGGCTTCACAGAGTCCAAGAAGTCTGGCGTCCCAAACTCAACTGATTCACCAAAAGTTTAAGTGGGCTCTAGTGGCGTAGACTCTCGT
**********************************************************************************************...((....((.(((....((((((.((.((....((........))..))))))))))))).))....)).************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 M021
embryo
 V111
male body		 V042
embryo
 V057
head
 V050
head
.............CGGGGTAAGAATCGATAGGCCACAAAC................................................................................................................................................................................................................... 27 0 20 4.35 87 82 2 0 3 0 0
..............GGGGTAAGAATCGATAGGCCACAAACT.................................................................................................................................................................................................................. 27 0 20 0.75 15 14 0 1 0 0 0
..........................................................................................................ATGCAGCTACTGAACAACTGACCAC........................................................................................................................ 25 0 20 0.70 14 14 0 0 0 0 0
...............GGGTAAGAATCGATAGGCCACAAACT.................................................................................................................................................................................................................. 26 0 20 0.60 12 9 1 2 0 0 0
............................................................................................................................................................................................GGCGTCCCAAACTCAACTGATTCAC...................................... 25 0 20 0.45 9 8 0 0 0 0 1
.........................................................................................................AATGCAGCTACTGAACAACTGACCA......................................................................................................................... 25 0 20 0.35 7 7 0 0 0 0 0
........................................................................GGGATCTCGACGATTGCAATAAC............................................................................................................................................................ 23 0 20 0.20 4 4 0 0 0 0 0
..............GGGGTAAGAATCGATAGGCCACAAAC................................................................................................................................................................................................................... 26 0 20 0.20 4 0 4 0 0 0 0
..............GGGGTAAGAATCGATAGGCCACAAA.................................................................................................................................................................................................................... 25 0 20 0.20 4 4 0 0 0 0 0
.......................................................GGACGCTTCGAGAGTAAGGGATC............................................................................................................................................................................. 23 1 20 0.20 4 0 4 0 0 0 0
..............GGGGTAAGAATCGATAGGCCA........................................................................................................................................................................................................................ 21 0 20 0.15 3 3 0 0 0 0 0
......................................................................AAGGGATCTCGACGATTGCAATAAC............................................................................................................................................................ 25 0 20 0.15 3 3 0 0 0 0 0
................................................................................................................................................................................................TCCCAAACTCAACTGATTCA....................................... 20 0 20 0.15 3 0 3 0 0 0 0
.................................................................................................AGACTGAAAATGCAGCTGCTGTACA................................................................................................................................. 25 3 20 0.15 3 0 3 0 0 0 0
...............GGGTAAGAATCGATAGGCCACAAAC................................................................................................................................................................................................................... 25 0 20 0.15 3 0 0 0 3 0 0
.................................................................................................................................................................TCAGGCTTCACAGAGTCCAAGAAG.................................................................. 24 0 20 0.15 3 3 0 0 0 0 0
......................................................................................................GAAAATGCAGCTACTGAACAACTGACCA......................................................................................................................... 28 0 20 0.10 2 2 0 0 0 0 0
.......................ATCGATAGGCCACAAACTTTTCC............................................................................................................................................................................................................. 23 0 20 0.10 2 2 0 0 0 0 0
...........................................................................................................TGCAGCTACTGAACAACTGACC.......................................................................................................................... 22 0 20 0.10 2 2 0 0 0 0 0
......................................................................................................GAAAATGCAGCTACTGAACAACTGACCAC........................................................................................................................ 29 0 20 0.10 2 0 2 0 0 0 0
.......................................................................................................................................................................TTCACAGAGTCCAAGAAGTCT............................................................... 21 0 20 0.10 2 1 0 0 0 1 0
...............................................................................................................GCTACTGAACAACTGACCACGACGT................................................................................................................... 25 0 20 0.10 2 2 0 0 0 0 0
...........................................TCCAACTCACTCAGACGCTTCGAGAGT..................................................................................................................................................................................... 27 0 20 0.10 2 1 0 0 1 0 0
....................................................................GTAAGGGATCTCGACGATTGCA................................................................................................................................................................. 22 0 20 0.05 1 0 0 1 0 0 0
.............................................CAACTCACTCAGACGCGTCGAGAGT..................................................................................................................................................................................... 25 1 20 0.05 1 1 0 0 0 0 0
...............GGGTAAGACTCGATAGGCCACAAAC................................................................................................................................................................................................................... 25 1 20 0.05 1 0 0 0 1 0 0
..................................................................................................................................................................................CGGGAAGTCTGGCGTCCCAAA.................................................... 21 2 20 0.05 1 0 0 1 0 0 0
.............CGGGGTAAGAATCGATAGCCCACAAAC................................................................................................................................................................................................................... 27 1 20 0.05 1 1 0 0 0 0 0
............................................................................................................................................................................GGAGTCCAAGAAGTCTGGCGTCCCAAAC................................................... 28 1 20 0.05 1 0 1 0 0 0 0
....................................................CTCAGACGCTTCGAGAGTAAGGGAT.............................................................................................................................................................................. 25 0 20 0.05 1 0 1 0 0 0 0
.................GTAAGAATCGATAGGCCACAAA.................................................................................................................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0 0
........................................................................................................................................................................TCACAGAGTCCAAGAAGTCTGGCGTCC........................................................ 27 0 20 0.05 1 1 0 0 0 0 0
........................................................................................................AAATGCAGCTACTGAACAACTGACC.......................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0 0
..........................................................................GATCTCGACGATTGCAATAACCCAGGCT..................................................................................................................................................... 28 0 20 0.05 1 1 0 0 0 0 0
..........................................TTCCAACTCACTCAGACGCTTCGAGAGT..................................................................................................................................................................................... 28 0 20 0.05 1 1 0 0 0 0 0
....TGACCTGGTCGGGGTAAGAATCGAT.............................................................................................................................................................................................................................. 25 0 20 0.05 1 1 0 0 0 0 0
................CGTAAGAATCGATAGGCCACAAACT.................................................................................................................................................................................................................. 25 1 20 0.05 1 1 0 0 0 0 0
................................................................................................................................................................................................TCCCAAACTCAACTGATTCAC...................................... 21 0 20 0.05 1 1 0 0 0 0 0
.....................................................................AAAGGGATCTCGACGATTGCAATAAC............................................................................................................................................................ 26 1 20 0.05 1 1 0 0 0 0 0
........................................................................................................AAATGCAGCTACTGAACGACTGACCA......................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0
.............CGGGGTAAGAATCTATAGGCCACAAA.................................................................................................................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0
.................GTAAGAATCGATAGGCCACAAAC................................................................................................................................................................................................................... 23 0 20 0.05 1 0 0 0 1 0 0
.................................................................................................................................................................TCAGGCTTCACAGAGCCCAAGAAGT................................................................. 25 1 20 0.05 1 0 1 0 0 0 0
...........................................................................................................TGCAGCTACTGAACAACTGAC........................................................................................................................... 21 0 20 0.05 1 0 0 1 0 0 0
.......................................................................................................................................................TCCCGTTAATTCAGGCTTCAC............................................................................... 21 0 20 0.05 1 0 1 0 0 0 0
....................................................................................................CTGAAAATGCAGCTACTGAACAACTGACC.......................................................................................................................... 29 0 20 0.05 1 1 0 0 0 0 0
........................................................................................CAATAACCCAGGCTGAAAATG.............................................................................................................................................. 21 0 20 0.05 1 0 0 0 0 1 0
....................AGAATCGATAGGCCACAAACTTTTCC............................................................................................................................................................................................................. 26 0 20 0.05 1 1 0 0 0 0 0
.............CGGGGTAAGAATCTATAGGCCACAAAC................................................................................................................................................................................................................... 27 1 20 0.05 1 1 0 0 0 0 0
........................................................................GGGATCTCGACGATTGCAATAACC........................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0 0
....................................................................GTAAGGGATCTCGACGATTGC.................................................................................................................................................................. 21 0 20 0.05 1 0 0 1 0 0 0
...........................................................................................................................................................GTTAATTCAGGCTTCACAGAGTCCAA...................................................................... 26 0 20 0.05 1 1 0 0 0 0 0
.....................................................TCAGACGCTTCGAGAGTAAGGGATCT............................................................................................................................................................................ 26 0 20 0.05 1 0 1 0 0 0 0
...................................................................AGTAAGGGATCTCGACGATT.................................................................................................................................................................... 20 0 20 0.05 1 0 0 0 0 1 0
..................................................................................CGATTGCAATAACCCAGGCTGAAAAT............................................................................................................................................... 26 0 20 0.05 1 0 1 0 0 0 0
....................................................................................................................................................................................................................................GCTCTAGTGGCGTAGACTCT... 20 0 20 0.05 1 1 0 0 0 0 0
........................................................................................................................................................................TCACAGAGTCCAAGAAGTCTGGCGT.......................................................... 25 0 20 0.05 1 1 0 0 0 0 0
...........................................................................................................TGCAGCTACTGAACGACTGACCA......................................................................................................................... 23 1 20 0.05 1 1 0 0 0 0 0
...............GGGTAAGAATCGATAGCCCACAAAC................................................................................................................................................................................................................... 25 1 20 0.05 1 1 0 0 0 0 0
...............................................................................................................................................................ATTCAGGCTTCACAGAGTCCAAG..................................................................... 23 0 20 0.05 1 1 0 0 0 0 0
...CTGACCTGGTCGGGGTAAGAAT.................................................................................................................................................................................................................................. 22 0 20 0.05 1 1 0 0 0 0 0
..........................................................................GATCTCGACGATTGCAATAACCCAGG....................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0 0
..........GGTCGGGGTAAGAATCGAT.............................................................................................................................................................................................................................. 19 0 20 0.05 1 1 0 0 0 0 0
............................................................................................................................................................................AGAGTCCAAGAAGTCTGGCGTCCCAA..................................................... 26 0 20 0.05 1 0 1 0 0 0 0
.................................................................................................................................................................................CCAAGAAGTCTGGCGTCCCAAAC................................................... 23 0 20 0.05 1 1 0 0 0 0 0
.............................................................................................................CAGCTACTGAACAGCTGACCAC........................................................................................................................ 22 1 20 0.05 1 1 0 0 0 0 0
................................................................GAGAGTAAGGGATCTCGACGATT.................................................................................................................................................................... 23 0 20 0.05 1 0 0 1 0 0 0
............................................................................................................GCAGCTACTGAACATCTGACCAC........................................................................................................................ 23 1 20 0.05 1 1 0 0 0 0 0
........................................................................GGGATCTCGACGATTGCAATAA............................................................................................................................................................. 22 0 20 0.05 1 0 0 1 0 0 0
........................................................................GGGATCTCGACGATTGCAATAACCCAGGC...................................................................................................................................................... 29 0 20 0.05 1 0 1 0 0 0 0
................................................................................................................................................................................TCCAAGAAGTCTGGCGTCCCAAAC................................................... 24 0 20 0.05 1 1 0 0 0 0 0
..................................................................................................................................................................................................................................GGGCGCTAGTGGCGTAGACT..... 20 1 20 0.05 1 0 0 0 0 1 0
.....................................................ACAGACGCTTCGAGAGTAAGGGATC............................................................................................................................................................................. 25 1 20 0.05 1 1 0 0 0 0 0
.................................................................................................................................................................................................................................TGGGCTCTAGTGGCGTAGACT..... 21 0 20 0.05 1 0 0 1 0 0 0
........................................................AACGCTTCGAGAGTAAGGGATC............................................................................................................................................................................. 22 1 20 0.05 1 1 0 0 0 0 0
......................................................CAGACGCTTCGAGAGTAAGGGATC............................................................................................................................................................................. 24 0 20 0.05 1 0 1 0 0 0 0
.................................................................................................................................................................TCGGGCTTCACAGAGTCCAAGAAGTCT............................................................... 27 1 20 0.05 1 1 0 0 0 0 0
.....................................................................TAAGGGATCTCGACGATTGCAAT............................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0 0
....................AGAATCGATAGGCCACAAACTTT................................................................................................................................................................................................................ 23 0 20 0.05 1 1 0 0 0 0 0
................................................................................................................................CACGACGTACGCATCTCCTCG...................................................................................................... 21 0 20 0.05 1 0 0 0 0 0 1
..............................GGCCACAAACTTTTCCAACTCACTCAG.................................................................................................................................................................................................. 27 0 20 0.05 1 1 0 0 0 0 0
.............CGGGGTAAGAATCGATACGCCACAAA.................................................................................................................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0
............................................................................................................GCAGCTACTGAACAACTGACC.......................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0 0
..........................................TTCCAACTCACTCAGACGCTT............................................................................................................................................................................................ 21 0 20 0.05 1 0 0 0 0 0 1
................................................................................................................................................................TTCAGGCTTCACAGAGTCCAAGA.................................................................... 23 0 20 0.05 1 1 0 0 0 0 0
.............................................................................................................................................................TAATTCAGGCTTCACAGAGTCCAAGAA................................................................... 27 0 20 0.05 1 1 0 0 0 0 0
.................................................................AGAGTAAGGGATCTCGACGA...................................................................................................................................................................... 20 0 20 0.05 1 0 0 1 0 0 0
..............................................................................................................AGCTACTGAACAACTGACCAC........................................................................................................................ 21 0 20 0.05 1 1 0 0 0 0 0
............................................................................................................................................................................................GGCGTCCCAAACTCAACTCATTCACCAAA.................................. 29 1 20 0.05 1 1 0 0 0 0 0
............................................................................................................................................................................AGAGTCCAAGAAGTCTGGCGTCCCAAA.................................................... 27 0 20 0.05 1 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_152:22985-23235 - dpe_820 TGGGACTGGACCAGCCCCATTCTTAGCTATCCGGTGTTTGAAAAGGTTGAGTGAGTCTGCGAAGCT-CTCATTCCCTAGAGCTGCTAACGTTATTGGGTCCGACTTTTACGTCGATGACTTGTTGACTGGTGCTGCATGCGTAGAGGAGCTAAGGGCAATTAAGTCCGAAGTGTCTCAGGTTCTTCAGAC-CGCAGGGTTTGAGTTGACTAAGTGGTTTTCAAATTCACCCGAGATCACCGCA---TCTGAGAGCA
dp5 Unknown_group_178:407-657 + TGGGACTGGACCAGCCCCATTCTTAGCTATCCGGTGTTTGAAAAGGTTGAGTGAGTCTGCGAAGCT-CTCATTCCCTAGAGCTGCTAACGTTATTGGGTCCGACTTTTACGTCGATGACTTGTTGACTGGTGCTGCATGCGTAGAGGAGCTAAGGGCAATTAAGTCCGAAGTGTCTCAGGTTCTGCAGAC-CACAGGGTTTGAGTTGACTAAGTGGTTTTCAAACTCACCCGAGATCACCGCA---TCTGAGAGCA
droWil2 scf2_1100000004967:3451720-3451969 - TGGTACGGTGCCAGCTCCCTTTCTGGCAATACGGTGTTTGACAAAGCTGGGTGAGATGATGGAATT-GTCATTCCCAAAAGCTGCTGAAGTTATCAGACACGATTTTTATGTTGATGACATGTTGACTGGTGCTGGATGCGTTGAGGACCTTCTGGCAATTAAGTCTGAATTGTCACAGGCATTGTTTAA-AGCAGGATTTGATTTAACCAAATGGTTTTTAAATAGTTTTGAAAGCCCCGCT---CCC-TTAGCA
droVir3 scaffold_12958:3070209-3070456 + CGGCACGGCGCCTGCCCCGTTTTAGGCAATAAGGTGCATAACAAAACTAGGTGAGATCTGCGAGTC-ATTATACCATAAAGCTTCTGACGTTACAAGGCAAAACTTTTATGTCGATGATTTACTGACTGGTGCTGCATGCGTAAAGAACCTTCTGACAATTAAGTCTGCAGTGTCGCCAATAATCAAAAA-TGCAGGTTTCGAACTAACCAAATGGTTTTCGAATTCTCCTGAGTTTTCTGCA---ACAAAGG---
droMoj3 scaffold_6541:1474060-1474300 + TGGGACAGCGACTGCTCCATTCTTAGCAATTCGATGTTTGAAACATCTGAGCGACT-TGCATGCTTCCACTCATCCATCTGCTGCAAGATCGTTAGCCCAAGATTTCTATGTTGATGACTTGTTGACAGGAGTAGATAGCGTTGAAGAATTGTGCTTGTTAGATCGACACTTGATAGCAATTCTTCAAGC-GTTTGGGTTTCCTCTCACAAAATGGTCGTCCAATTGTAA----------ACA---ACTTGCAGCA
droGri2 scaffold_15057:50468-50721 + TGGAACAGCCTCAGCGCCATACTTAGCCATACGCATCCTGCATTATTTG-GCAAATCTGTGTCGAACTGAGTATCCAATCGGTGCTGCAGTCATTGCATCGTCGTTCTATGTAGATGACCTGTTATCTGGAGGTGAGGACATAGAAAATCTTCGCACAATCAAGGATCAAGTCACGAAAATTCTTCATCG-TGGTCACTTTCCGTTATCTAAGTGGCATTCAAATCATGCCCAATTTATCGAAAACTTCGTTATCA
droAna3 scaffold_13234:3488-3738 + TGGCACTGCACCAGCCCCATTCCTGGCCATAAGGTGTTTGAAGAGGTTGAGTGAATCCGCGAAAAA-TACATTCCCTCGAGCTGCTAAAGTTATTGGGTCTGACTTTTACGTCGACGACTTGTTAACGGGTGCTGGTTGCGTGGAGGAGCTAAAGACAATTAAGTCTGAAGTAACTCAGGTTCTTCAAAA-CGCTGGGTTTGAATTGAGCAAGTGGTTTTCAAACTCGCCTGAAGTTACTGCA---TCCGAGAGCA
droBip1 scf7180000391653:6194-6444 + TGGCACTGCACCAGCCCCATTCCTGGCCATAAGGTGTTTGAAGAGGTTGAGTGAATCTGTGAAAAA-TACATTCCCTCGAGCTGCCAAAGTTATTGGGTCCGACTTTTACGTCGACGACATGTTAACGGGTGCTGGTTGCATTGAGGAGCTAAAGACAATTAAGTCTGAAGTAACTCAGGTTCTTCAAAA-CGCTGGGTTTGAATTGAGCAAGTGGTTTTCAAACTCGCCTGAAGTTACTGCA---TCCGAGAGCA
droKik1 scf7180000302132:7483-7733 - TGGTACTGGACAAGCCCCTTTTCTGGCTATTCGGTGTTTAGAAAGGTTAAGTGAATCTGCGAAACT-TTCATTCCCTAGAGCTGCCGACGTAATTGGATCCGATTTTTACGTCGATGACATGCTAACTGGTGCTGCATGCGTAGAGGAGCTACAGACAATCAAGTCTGAAGTGTGTCAGGTTCTTCAAAC-ATCAGGTTTTGAATTGACAAAGTGGTTTTCAAACTCACCTGAGGTCACTGCA---TCTGAGAGCA
droFic1 scf7180000453822:14092-14342 + TGGAACTGGCCCAGCTCCATATCTAGCGATTCGGTCTTTAAAAAGGTTGAGTGAATCTGCCAAGCT-TTCATTCCCTAGAGCTGCTGAAGTTATTGGATCCGACTTTTACGTCGATGATATGCTAACTGGTGCTGCATGCGTCGAGGAGCTCAGATCTATCAGGTCTGAAGTGTCTCAGGTTCTTCAAAC-CGCAGGGTTTGAATTGACAAAGTGGTTTTCAAACTCACCTGAGGTCACCGCA---TCTGAGAGCA
droEle1 scf7180000490651:46966-47215 - TGGTTCTGGACCAGCCCTATTTCTAGCTATTCGGTGTTTAAGAAGGTTGAGTGAG-CTGCAAAACT-TTCATTCTCTAGAGCTTCTAAAGTTATTGGATCCGTCTTTTACGTCGATGATATGTTGAGTGGTGCTGAATGCGTAGATGAGCTAAAGACTATTAAGTCTGTAGTGTCTCAGGTTCTTCAAAC-AGCAGGATTTGAATTAACAAAGTGGTTTTCTAACTCACCTGAAGTCACCGCA---TCTAAGAACA
droRho1 scf7180000777377:21973-22223 - TGGTACTGGACCAGCCCCGTTTTTGGCTATTCGGTGTTTAAAAAGGTTAAGTGAGTCTGCCAAAGT-TTCTTTTCCTAGAGCTGCTAAGGTTATTGGATCCGACTTTTATGTCGATGATATGTTGACTGGTGCTGCATGCGTAGAGGAGTTAAAGGCTATTAAGTCTGAAGTATCTCAGGTTCTTCAAAC-TGCAGGTTTTGAATTGACAAAGTGGTTTTCAAACTCACCTGACGTTACCGCA---TCTGAGAGCA
droBia1 scf7180000302352:21476-21682 + --------------------------------------------GGTTAAAAGAGTCTGCCAAACT-TTGTTTTACTAGAGCTGGGTAAGTTATTGGATACGACCTTTATGTCAGTGACATGTTGACTGTTGCTGCCTGCATAGAGGAGTTAAAGACTTTTATGTCTGAAGTTTCTCAGGTTCTTCAAAC-TGGAGGTATTGAATTGACAAAGTGGTTTTCAAATTCACCTGACGTCACCGCA---TATGAGAGAA
droTak1 scf7180000414385:15904-16154 + TGGGACTGGACCAGCCCCATTTCTGGCAATTCGGTGTTTAAAAAGGTTAAGCGAGTCTGCCAAACT-TTCTTTTCCTAGAGCTGCTGAAGTTATTGGATCCGACTTTTATGTCGATGACATGTTGACTGGTGCTGCATGCGTAGAGGAGTTAAAGACTATTAAGTCTGAAGTGTCTCAGGTTCTTCAAAC-TGCAGGTTTTGAATTGACAAAGTGGTTTTCAAACTCACCTGACGTCACCGCA---TCTGAGAGCA
droEug1 scf7180000407098:3161-3407 - TGGAACTTTGCCAGCTCCGTTTATGGTGATCCGGTGTTTAATGCAGCTTGGAGAGATGGCGCAAGC-TAAGT-A-AGTAAGCTGCGAAAGTCATTCAGAAAGATTTCTATGTTGACAATATGTTGACAGGCGCCGGAAGCGTTGAGAACCTGCAAAGCCTCGTG-ATGAAGTTTCTTTGATT-TGCAAGA-GGCAGGTTTTGAATTGGCAAAGTGGTTTTCGAACTGCCCAGAGATCTCCGCA---TCTGAGAGCG
dm3 chrU:400597-400847 + TGATACTAGACTAGCCCCATTTCTGCCTATTCGGTGTTTATAACTTTTGAATTCGGCATGAAAATT-TGCATTCCCTAGAGCTGCCGACGTTATTGGATCCGATTTTTACGTCGATGACCTGTTAAATGGTACTGCATGCGTAAAGGAGCTAAAAACAATTAAGTCTGAAGTGTCTCAGGTTCTTTAAAA-AGCAGGATTTGAATTGACGAAGTGGTTTTCAAACTCACCTGAGGTCACTGCA---TTTGAGAGCA
droSim2 node_83318:1473-1697 - --------------------------CTATTCGGTGTTTAAAGAGGTTGAGTGAATCTGCTAAATG-TTCATTCCCTAGAGCTGCCGACGTGATTGGATCCGATTTTTACGTCGATGACATGTTAACTGGTGCTGCATGCGTAGAGGAGCTAAAGACAATTAAGTCTGAAGTGTCTCAGGTTCTTCAAAC-AGCAGGTTTTGAATTGACAAAGTGGTTTTCAAACTCACCTGAGGTCACTGCA---TCTGAGAGCA
droSec2 scaffold_99:79950-80165 + TGGTACTGCACCAGCCCCATTTCTGGGTATACGGTGTTTAAAAAGGTTGAGTGAGC-------------CATTTCCTAGAGCTGCCGACGTCATTGGATCCGACTTTTAAGTCGATGACATGGTAACTAGTGCTGCATGCGTAGATGAGCTAAATACAATTAAGTCTATGTT-------CCT-AGCAAAACTG-TCAGTTTAAGCTTATAAA-TTATATTCAAAGTCG----AAA-------------GTAGCGTA
droYak3 v2_chrUn_6631:74545-74795 - TGGTACTGGACCAGCCCCATTTCTGGCTATTCGGTGTTTAAAGAGGTTGAGTGAATCTGCTAAATT-TTCATTTCCTAGAGCAGCCGACGTAATTGGATCCGATTTTTACGTCGATGACATGTTAACTGGTGCTGCATGCGTAGAGGAGCTAAAGACAATTAAGTCTGAAGTGTCTCAGGTTCTTCAAAC-AGCAGGTTTTGAATTGACAAAGTGGTTTTCAAACTCACCTGAGGTCACTGCA---TCTGAGAGCA
droEre2 scaffold_4845:1145431-1145680 - TGGTACTGGACCAGCCCCATTGCTGGCTATTCGGTGTTTTAAAAGGGTGAGTGAATCTGCAAGATT-TTCATTTCCTAGAGCTGCCGACTTAATTGGATCAGATTTTTACGTCGATGACATGTTAACTGGTGCTGCATGCGTAAAGGAGCTAATGACAATGTAGTCTGAAGTGTCTCAGATTCTTCAAGC-AGCA-GTTTTGAATTGACAAAGTGGTTTTTAAACTCACCTGAGATCACTGCA---TTTGAGAGCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
TGGGACTGGACCAGCCCCATTCTTAGCTATCCGGTGTTTGAAAAGGTTGAGTGAGTCTGCGAAGCT-CTCATTCCCTAGAGCTGCTAACGTTATTGGGTCCGACTTTTACGTCGATGACTTGTTGACTGGTGCTGCATGCGTAGAGGAGCTAAGGGCAATTAAGTCCGAAGTGTCTCAGGTTCTTCAGAC-CGCAGGGTTTGAGTTGACTAAGTGGTTTTCAAATTCACCCGAGATCACCGCA---TCTGAGAGCASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..............................CCGGTGTTTGAAAAGGTTGAGTGAG.........................................................................................................................................................................................................25200.102020000
......................................................................................AACGTTATTGGGTCCGACTTTTACGT................................................................................................................................................26200.102020000
..........................................................................................................................................GCGTAGAGGAGCTAAGGGCA..................................................................................................20200.102000002
.............................................................................................................................ACTGGTGCTGCATGCGTAGA...............................................................................................................20200.051010000
.......................................GAAAAGGTTGAGTGAGTCTGC....................................................................................................................................................................................................21200.051000001
....................................TTTGAAAAGGTTGAGTGAGTC.......................................................................................................................................................................................................21200.051010000
...................................................................................................................................................................GTCCGAAGTGTCTCAGGTTCT........................................................................21200.051010000
........................................AAAAGGTTGAGTGAGTCTGC....................................................................................................................................................................................................20200.051000001
.........................................................................................................................GTTGACTGGTGCTGCATGCGTAGAGG.............................................................................................................26200.051010000
.....................................................................................TAACGTTATTGGGTCCGACTTTTACGT................................................................................................................................................27200.051010000
...............................CGGTGTTTGAAAAGGTTGAGTGAGTC.......................................................................................................................................................................................................26200.051010000
.........................GCTATCCGGTGTTTGAAAAG...................................................................................................................................................................................................................20200.051000001
.........................................................................................................................................................................................CAGAC-CGCAGGGTTTGAGTTGACTAA............................................26200.051010000
.............................TCCGGTGTTTGAAAAGGTTGA..............................................................................................................................................................................................................21200.051010000
.....................................................................CATTCCCTAGAGCTGCTAACGTTAT..................................................................................................................................................................25200.051010000
..................................................................................TGCTAACGTTATTGGGTCCGACTTT.....................................................................................................................................................25200.051010000
.....................................TTGAAAAGGTTGAGTGAGTCTGC....................................................................................................................................................................................................23200.051010000
.............................TCCGGTGTTTGAAAAGGTTGAGTGA..........................................................................................................................................................................................................25200.051010000
dp5
TGGGACTGGACCAGCCCCATTCTTAGCTATCCGGTGTTTGAAAAGGTTGAGTGAGTCTGCGAAGCT-CTCATTCCCTAGAGCTGCTAACGTTATTGGGTCCGACTTTTACGTCGATGACTTGTTGACTGGTGCTGCATGCGTAGAGGAGCTAAGGGCAATTAAGTCCGAAGTGTCTCAGGTTCTGCAGAC-CACAGGGTTTGAGTTGACTAAGTGGTTTTCAAACTCACCCGAGATCACCGCA---TCTGAGAGCASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
........................................................................................................................TGTTGACTGGTGCTGCATGCGTAG................................................................................................................24860.7548608600200319790
........................................................................................................................TGTTGACTGGTGCTGCATGCGTAGA...............................................................................................................25857.5046006910401292930
........................................................................................................................TGTTGACTGGTGCTGCATGCGTAGAGG.............................................................................................................27826.6321306000000441090
........................................................................................................................TGTTGACTGGTGCTGCATGCGT..................................................................................................................221024.1024106800408143180
........................................................................................................................TGTTGACTGGTGCTGCATGCGTAGAG..............................................................................................................26814.881190261000048440
........................................................................................................................TGTTGACTGGTGCTGCATGCG...................................................................................................................211014.801480391000087210
.................................GTGTTTGAAAAGGTTGAGTGAGTC.......................................................................................................................................................................................................241114.451590135403012410
........................................................................................................................TGTTGACTGGTGCTGCATGCGTA.................................................................................................................231012.00120080001003270
.................................GTGTTTGAAAAGGTTGAGTGAGT........................................................................................................................................................................................................231110.0011009720106130
.............................................................................................................................................................................................................TGACTAAGTGGTTTTCAAACTCACC..........................2569.335604660000310
.............................................................................................................................................................................................................TGACTAAGTGGTTTTCAAACTCACCC.........................2657.603803260000000
.....................................................................................TAACGTTATTGGGTCCGACTTTTA...................................................................................................................................................2496.7861033000002080
.............................................................................................................................................................................................................TGACTAAGTGGTTTTCAAACTCACCCG........................2756.603302560100100
............................................................................TAGAGCTGCTAACGTTATTGGGT.............................................................................................................................................................2395.785205010000100
.....................................................................................TAACGTTATTGGGTCCGACTTTT....................................................................................................................................................2395.2247032000001410
.............................................................................................................................................................................................................TGACTAAGTGGTTTTCAAACTCACCCGA.......................2855.002502220000010
.....................................................................................TAACGTTATTGGGTCCGACTTT.....................................................................................................................................................2294.894403820000310
.................................GTGTTTGAAAAGGTTGAGTGAG.........................................................................................................................................................................................................22114.825304600003310
.....................................................................................TAACGTTATTGGGTCCGACTTTTACG.................................................................................................................................................2694.5641028001002100
............................................................................TAGAGCTGCTAACGTTATTGGGTC............................................................................................................................................................2494.564103320006000
............................................................................TAGAGCTGCTAACGTTATTGGGTCC...........................................................................................................................................................2594.444003310002400
................................................................................................................................................................TAAGTCCGAAGTGTCTCAGGTTCT........................................................................2464.172501900000600
...................................................................................................................TGACTTGTTGACTGGTGCTGCATGCG...................................................................................................................2684.1333020000014170
............................................................................TAGAGCTGCTAACGTTATTGGGTCCGA.........................................................................................................................................................2793.783403200001010
.............................................................................................................................................................................................................TGACTAAGTGGTTTTCAAACTCAC...........................2463.672201830000100
..........................................................................................................................TTGACTGGTGCTGCATGCGTAGAGG.............................................................................................................2583.6329040000011140
............................................................................TAGAGCTGCTAACGTTATTGGG..............................................................................................................................................................2293.563202210106020
............................................................................TAGAGCTGCTAACGTTATTGGGTCCG..........................................................................................................................................................2692.892602500001000
..................................................................................TGCTAACGTTATTGGGTCCGACT.......................................................................................................................................................2382.752202000200000
..................................................................................TGCTAACGTTATTGGGTCCGACTT......................................................................................................................................................2482.752202200000000
........................................................................................................................TGTTGACTGGTGCTGCATGC....................................................................................................................20112.733002000000640
........................................................................................................................................................................................................TGAGTTGACTAAGTGGTTTTCAAAC...............................2562.50150700102320
........................................................................................................................TGTTGACTGGTGCTGCATGCGTAGAA..............................................................................................................2682.502007100001020
.................................GTGTTTGAAAAGGTTGAGTGA..........................................................................................................................................................................................................21112.362601710303200
.....................................................................................TAACGTTATTGGGTCCGACTTTTAC..................................................................................................................................................2592.332101440200010
....................................TTTGAAAAGGTTGAGTGAGTCTG.....................................................................................................................................................................................................23112.272502200001200
...........................................................................................................................TGACTGGTGCTGCATGCGTAGAGG.............................................................................................................2482.251804000002120
..................................................................................TGCTAACGTTATTGGGTCCGACTTT.....................................................................................................................................................2582.251801700001000
............................................................................................................................................................................................................TTGACTAAGTGGTTTTCAAACTCACCCG........................2852.20110220100600
.................................GTGTTTGAAAAGGTTGAGTG...........................................................................................................................................................................................................20112.002201800003100
............................................................................TAGAGCTGCTAACGTTATTGG...............................................................................................................................................................2192.001801600002000
....................................TTTGAAAAGGTTGAGTGAGTCTGC....................................................................................................................................................................................................24111.912101700102010
.....................................................................................TAACGTTATTGGGTCCGACTTTTACGT................................................................................................................................................2791.891701410002000
..............................................................................................................................................................................................................GACTAAGTGGTTTTCAAACTCACCC.........................2551.8090720000000
.....................................................................................TAACGTTATTGGGTCCGACTT......................................................................................................................................................2191.781601600000000
...........................................................................................................................TGACTGGTGCTGCATGCGTAGAGGAGC..........................................................................................................2781.75140000000590
..................................TGTTTGAAAAGGTTGAGTGAGTC.......................................................................................................................................................................................................23111.731901710100000
........................................................................................................................TGTTGACTGGTGCTGCATG.....................................................................................................................19111.641801400000400
...................................................................................GCTAACGTTATTGGGTCCGACTT......................................................................................................................................................2381.50120900100200
.........................................................TGCGAAGCT-CTCATTCCCTAGAGC..............................................................................................................................................................................24101.501501230000000
.........................................................................................................................GTTGACTGGTGCTGCATGCGTAGAGG.............................................................................................................2681.50120900000300
..........................................................................................................................TTGACTGGTGCTGCATGCGTAG................................................................................................................2281.50120700000320
...................................................................................GCTAACGTTATTGGGTCCGACTTT.....................................................................................................................................................2481.501201200000000
..............................................................................................................................................................................................................GACTAAGTGGTTTTCAAACTCACC..........................2461.5090900000000
........................................................................................................................TGTTGACTGGTGCTGCATGCGTAA................................................................................................................24121.331604000001200
...................................................................................................................TGACTTGTTGACTGGTGCTGCATG.....................................................................................................................2491.33120800000130
..........................................................................................................................TTGACTGGTGCTGCATGCGTAGA...............................................................................................................2381.25100800000200
.........................................................................................................................GTTGACTGGTGCTGCATGCGTAG................................................................................................................2381.25100900000010
..............................................................................................................................................................................................................GACTAAGTGGTTTTCAAACTCACCCG........................2651.2060600000000
....................................TTTGAAAAGGTTGAGTGAGTCTGCGA..................................................................................................................................................................................................26111.181301200001000
................................................................................................................................................................TAAGTCCGAAGTGTCTCAGG............................................................................2071.1480700001000
......TGGACCAGCCCCATTCTTAGCTATC.................................................................................................................................................................................................................................2581.1390710000010
.................................................................T-CTCATTCCCTAGAGCTGCTAACGT.....................................................................................................................................................................25101.10110900000110
..............................................................................................................................................................................................................GACTAAGTGGTTTTCAAACTCACCCGA.......................2751.0050410000000
.............................................................................................................................................................................................................TGACTAAGTGGTTTTCAAACTCACCCGAG......................2951.0050230000000
........................................................................................................................TGTTGACTGGTGCTGCATGCGTAGAAA.............................................................................................................2781.0080610000100
......................................................................................AACGTTATTGGGTCCGACTTTTAC..................................................................................................................................................2491.0090600100200
.......................TAGCTATCCGGTGTTTGAAAAGGT.................................................................................................................................................................................................................24141.00140700001420
................................................................................................................................................................TAAGTCCGAAGTGTCTCAGGTTC.........................................................................2361.0060410100000
.............................................................................................................................................................................................................TGACTAAGTGGTTTTCAAACTCA............................2361.0060600000000
......................TTAGCTATCCGGTGTTTGAAAAGGT.................................................................................................................................................................................................................25141.00140900102020
..........................................................................................................................TTGACTGGTGCTGCATGCGTAGAGGA............................................................................................................2681.0080000000710
.................................................................T-CTCATTCCCTAGAGCTGCTAACG......................................................................................................................................................................24100.9090900000000
......................................................................................AACGTTATTGGGTCCGACTTTTACG.................................................................................................................................................2590.8980400000400
......TGGACCAGCCCCATTCTTAGCTATCC................................................................................................................................................................................................................................2680.8870610000000
...........................................................................................................TACGTCGATGACTTGTTGACTGGTGC...........................................................................................................................2680.8870300000220
...........................................................................................................................TGACTGGTGCTGCATGCGTAGAGGA............................................................................................................2580.8870000000430
...........................TATCCGGTGTTTGAAAAGGTTGAG.............................................................................................................................................................................................................24110.8290000000450
........................................................................................................................TGTTGACTGGTGCTGCATGCGA..................................................................................................................22100.8080200000600
.................................................................................................................................................................................................................TAAGTGGTTTTCAAACTCACCCGAGA.....................2650.8040301000000
...................................................................................GCTAACGTTATTGGGTCCGACT.......................................................................................................................................................2280.7560600000000
...........................................................................................................................TGACTGGTGCTGCATGCGTAGAG..............................................................................................................2380.7560200000400
...................................................................................GCTAACGTTATTGGGTCCGAC........................................................................................................................................................2180.7560600000000
...................................................................................................................TGACTTGTTGACTGGTGCTGCATGCGT..................................................................................................................2780.7560000000600
........................................................................................................................TGTTGACTGGTGCTGCATGCGTAGG...............................................................................................................2580.7560200000400
........................................................................................................................TGTTGACTGGTGCTGCATGCGTAGAGA.............................................................................................................2780.7560000100230
..........................................AAGGTTGAGTGAGTCTGCGAAGC...............................................................................................................................................................................................23110.7380510000110
.......................................GAAAAGGTTGAGTGAGTCTGCGAAGC...............................................................................................................................................................................................26110.7380300001220
.................................GTGTTTGAAAAGGTTGAGTGAGTCTG.....................................................................................................................................................................................................26110.7380500000210
....................................TTTGAAAAGGTTGAGTGAGTCT......................................................................................................................................................................................................22110.7380710000000
.............................................................................AGAGCTGCTAACGTTATTGGGTC............................................................................................................................................................2390.6760510000000
.....................................................................................TAACGTTATTGGGTCCGACT.......................................................................................................................................................2090.6760400100100
...................................................................................................................TGACTTGTTGACTGGTGCTGCAT......................................................................................................................2390.6760300000030
.....................................................................................................................................TGCATGCGTAGAGGAGCTAAGGGC...................................................................................................2490.6760200000310
.......................................................................................................................TTGTTGACTGGTGCTGCATGCGTAGA...............................................................................................................2660.6740100000210
.............................................................................................................................................................................................................TGACTAAGTGGTTTTCAAACTC.............................2260.6740300100000
......................................................................................AACGTTATTGGGTCCGACTTTTA...................................................................................................................................................2390.6760600000000
.......................TAGCTATCCGGTGTTTGAAAAGG..................................................................................................................................................................................................................23140.6490700000110
..................................TGTTTGAAAAGGTTGAGTGAGT........................................................................................................................................................................................................22110.6470700000000
..................................TGTTTGAAAAGGTTGAGTGAG.........................................................................................................................................................................................................21110.6470500001010
..........................................................................................................................TTGACTGGTGCTGCATGCGTAGAG..............................................................................................................2480.6350500000000
........................................................................TCCCTAGAGCTGCTAACGTTATTGGG..............................................................................................................................................................2680.6350300000200
.........................................................................................................................GTTGACTGGTGCTGCATGCGTAGA...............................................................................................................2480.6350500000000
............................................................................TAGAGCTGCTAACGTTATTGGGTCCGAC........................................................................................................................................................2880.6350500000000
......TGGACCAGCCCCATTCTTAGCTATCCGG..............................................................................................................................................................................................................................2880.6350300000020
.........................................................................................................................GTTGACTGGTGCTGCATGCGT..................................................................................................................21100.6060600000000
..............................................................................................................................................................................................................GACTAAGTGGTTTTCAAACTCACCCGAG......................2850.6030300000000
...............................................................................................................................................................TTAAGTCCGAAGTGTCTCAGG............................................................................2170.5740200000020
................................................................................................................................................................TAAGTCCGAAGTGTCTCAGGTT..........................................................................2270.5740400000000
...........................................................................................................................................................................................................................TCAAACTCACCCGAGATCACCGCA---TC........2670.5740300100000
..................................................................................TGCTAACGTTATTGGGTCCGA.........................................................................................................................................................2190.5650500000000
......................................................................................AACGTTATTGGGTCCGACTTT.....................................................................................................................................................2190.5650500000000
.....................................................................................................................................TGCATGCGTAGAGGAGCTAAGG.....................................................................................................2290.5650300000020
...................................................................................................................TGACTTGTTGACTGGTGCTGCATGC....................................................................................................................2590.5650100000400
.............................................................................AGAGCTGCTAACGTTATTGGGT.............................................................................................................................................................2290.5650500000000
.................................GTGTTTGAAAAGGTTGAGTGAGA........................................................................................................................................................................................................23110.5560600000000
.....................................TTGAAAAGGTTGAGTGAGTCTGC....................................................................................................................................................................................................23110.5560500001000
....................................TTTGAAAAGGTTGAGTGAGTCTGCG...................................................................................................................................................................................................25110.5560500000100
....................................TTTGAAAAGGTTGAGTGAGTC.......................................................................................................................................................................................................21110.5560600000000
.............................TCCGGTGTTTGAAAAGGTTGAGTGA..........................................................................................................................................................................................................25110.5560400000020
.............................TCCGGTGTTTGAAAAGGTTGAGTGAGT........................................................................................................................................................................................................27110.5560410001000
.....................................TTGAAAAGGTTGAGTGAGTCTG.....................................................................................................................................................................................................22110.5560600000000
............................................................................................................................................................................................................TTGACTAAGTGGTTTTCAAACTCA............................2460.5030300000000
...........................................................................................................................TGACTGGTGCTGCATGCGTAGA...............................................................................................................2280.5040200000020
...........................................................................................................TACGTCGATGACTTGTTGACTGGTG............................................................................................................................2580.5040200000020
...........................................................................................................................TGACTGGTGCTGCATGCGTAGAGGAG...........................................................................................................2680.5040000000130
...........................................................................................................TACGTCGATGACTTGTTGACTGG..............................................................................................................................2380.5040300000010
............................................................................................................................................................................................................TTGACTAAGTGGTTTTCAAACTCACC..........................2660.5030300000000
........................................................................................................................TGTTGACTGGTGCTGCATGCGTAGAGGA............................................................................................................2880.5040200000020
......TGGACCAGCCCCATTCTTAGCTATCCG...............................................................................................................................................................................................................................2780.5040400000000
........................................................................TCCCTAGAGCTGCTAACGTTATTGG...............................................................................................................................................................2580.5040400000000
.........................................................................................................................GTTGACTGGTGCTGCATGCGTA.................................................................................................................22100.5050500000000
......................................................................................................................................................TAAGGGCAATTAAGTCCGAAGTG...................................................................................2360.5030000000300
.....................................TTGAAAAGGTTGAGTGAGTCTGCG...................................................................................................................................................................................................24110.4550500000000
.............................TCCGGTGTTTGAAAAGGTTGAGTGAG.........................................................................................................................................................................................................26110.4550100100210
.....................................................................................TAACGTTATTGGGTCCGACTTTTAA..................................................................................................................................................2590.4440400000000
......................................................................................AACGTTATTGGGTCCGACTTTTACGT................................................................................................................................................2690.4440400000000
......................................................................................AACGTTATTGGGTCCGACTT......................................................................................................................................................2090.4440400000000
...................................................................................................................TGACTTGTTGACTGGTGCTGC........................................................................................................................2190.4440100000210
......................TTAGCTATCCGGTGTTTGAAAAGG..................................................................................................................................................................................................................24140.4360500001000
....................TCTTAGCTATCCGGTGTTTGAAAAGG..................................................................................................................................................................................................................26140.4360600000000
................................................................................................................................................................TAAGTCCGAAGTGTCTCAGGT...........................................................................2170.4330300000000
.............................................................................................................................................................................................................TGACTAAGTGGTTTTCAAACT..............................2170.4330300000000
.................................GTGTTTGAAAAGGTTGAG.............................................................................................................................................................................................................18120.4250400000010
............................................................................................................................................................................................................TTGACTAAGTGGTTTTCAAACTCACCCGA.......................2950.4020200000000
...................................................TGAGTCTGCGAAGCT-CTCATTCCC....................................................................................................................................................................................24100.4040310000000
....................................................................TCATTCCCTAGAGCTGCTAACGT.....................................................................................................................................................................23100.4040400000000
.........................................................................................................................................TGCGTAGAGGAGCTAAGGGC...................................................................................................20100.4040200000020
.........................................................................................................................................TGCGTAGAGGAGCTAAGGG....................................................................................................19100.4040200101000
...............................................................................................................................................................................................................ACTAAGTGGTTTTCAAACTCACCCG........................2550.4020200000000
.........................................................TGCGAAGCT-CTCATTCCCTAG.................................................................................................................................................................................21100.4040210000100
....................................................................TCATTCCCTAGAGCTGCTAACG......................................................................................................................................................................22100.4040200200000
..................................................................................TGCTAACGTTATTGGGTCCGAC........................................................................................................................................................2280.3830300000000
.........................................................................................................................GTTGACTGGTGCTGCATGCGTAGAG..............................................................................................................2580.3830300000000
..................................................................................TGCTAACGTTATTGGGTCCGACTTTT....................................................................................................................................................2680.3830300000000
...................................................................................GCTAACGTTATTGGGTCCGACTTTT....................................................................................................................................................2580.3830000000300
........................................................................................................................TGTTGACTGGTGCTGCATGCGTAGT...............................................................................................................2580.3830100000200
........................................................................................................................TGTTGACTGGTGCTGCATGCGTAGAGT.............................................................................................................2780.3830300000000
...........................................................................................................................TGACTGGTGCTGCATGCGTAG................................................................................................................2180.3830000000210
..................................................................................TGCTAACGTTATTGGGTCCGACTTTTA...................................................................................................................................................2780.3830200000010
...............................CGGTGTTTGAAAAGGTTGAGTGAGTC.......................................................................................................................................................................................................26110.3640400000000
.........................................................................................................................GTTGACTGGTGCTGCATGC....................................................................................................................19110.3640400000000
................................GGTGTTTGAAAAGGTTGAGTGAG.........................................................................................................................................................................................................23110.3640400000000
.....................................TTGAAAAGGTTGAGTGAGTCTGCGA..................................................................................................................................................................................................25110.3640300001000
......................................TGAAAAGGTTGAGTGAGTCTGCGA..................................................................................................................................................................................................24110.3640000100030
.....................................................................................................................................TGCATGCGTAGAGGAGCTAAGGG....................................................................................................2390.3330200001000
..........................................................................................................................................................GGCAATTAAGTCCGAAGTGTCTCAGG............................................................................2660.3320200000000
........................................................................................................................................................................................................TGAGTTGACTAAGTGGTTTTCAAA................................2460.3320100000100
........................................................................................................................................................................................................................TTTTCAAACTCACCCGAGATCACCG...............2560.3320000000200
............................................................................TAGAGCTGCTAACGTTATTGGGTCCGT.........................................................................................................................................................2790.3330300000000
.........................................................................................................................................................................................................GAGTTGACTAAGTGGTTTTCAAAC...............................2460.3320200000000
......................................................................................AACGTTATTGGGTCCGACTTTT....................................................................................................................................................2290.3330300000000
...............................................................................................................................................................................................................................ACTCACCCGAGATCACCGCA---TCTGAG....2660.3320200000000
.......................................................................................................................TTGTTGACTGGTGCTGCATGCGTAG................................................................................................................2560.3320000000200
.......................................................................................ACGTTATTGGGTCCGACTTTTA...................................................................................................................................................2290.3330300000000
........................................................................................................................TGTTGACTGGTGCTGCATGCGTAGAGGGAG..........................................................................................................3090.3330000000300
TGGGACTGGACCAGCCCCATTCTTAGC.....................................................................................................................................................................................................................................2790.3330300000000
............................................................................................................................................................................................................TTGACTAAGTGGTTTTCAAACTCAA...........................2560.3320200000000
......TGGACCAGCCCCATTCTTAGCTA...................................................................................................................................................................................................................................2390.3330300000000
....................................................................................................................................................................TCCGAAGTGTCTCAGGTTCT........................................................................2090.3330300000000
..............................................................................................................................................................................................................GACTAAGTGGTTTTCAAACTC.............................2160.3320110000000
...................................................................................................................TGACTTGTTGACTGGTGCTG.........................................................................................................................2090.3330200000010
......TGGACCAGCCCCATTCTTAGCTAT..................................................................................................................................................................................................................................2490.3330300000000
...........................TATCCGGTGTTTGAAAAGGTTGA..............................................................................................................................................................................................................23130.3140300000100
........................................................................................................................TGTTGACTGGTGCTGCATGCGTT.................................................................................................................23100.3030100100010
.........................................................................................................................GTTGACTGGTGCTGCATGCG...................................................................................................................20100.3030300000000
.......................................................TCTGCGAAGCT-CTCATTCCCTAGAGC..............................................................................................................................................................................26100.3030300000000
.....................................................................................TAACGTTATTGGGTCCGACTTTTACA.................................................................................................................................................26100.3030300000000
.............................................................................................................................................TAGAGGAGCTAAGGGCAATTAAG............................................................................................2370.2920100001000
.............................................................................................................................................TAGAGGAGCTAAGGGCAATTAAGTCC.........................................................................................2670.2920200000000
............................................................................................................................................................CAATTAAGTCCGAAGTGTCTCAGGT...........................................................................2570.2920100001000
.................................................................................................................................................................................................CAGGGTTTGAGTTGACTAAGTGG........................................2370.2920000000200
......................................TGAAAAGGTTGAGTGAGTCTGCGAAGC...............................................................................................................................................................................................27110.2730010000020
......................................TGAAAAGGTTGAGTGAGTCTG.....................................................................................................................................................................................................21110.2730300000000
......................................TGAAAAGGTTGAGTGAGTCTGCGAAG................................................................................................................................................................................................26110.2730300000000
...........................................AGGTTGAGTGAGTCTGCGAAG................................................................................................................................................................................................21110.2730300000000
.....................................TTGAAAAGGTTGAGTGAGTCTGCGAA.................................................................................................................................................................................................26110.2730100000200
...............................CGGTGTTTGAAAAGGTTGAGTGAG.........................................................................................................................................................................................................24110.2730300000000
.................................GTGTTTGAAAAGGTTGAGTGAA.........................................................................................................................................................................................................22110.2730300000000
................................GGTGTTTGAAAAGGTTGAGTGAGTC.......................................................................................................................................................................................................25110.2730300000000
.......................................GAAAAGGTTGAGTGAGTCTGCGAAG................................................................................................................................................................................................25110.2730100000020
.................................GTGTTTGAAAAGGTTGAGTGAGTCTA.....................................................................................................................................................................................................26110.2730100000200
......................................TGAAAAGGTTGAGTGAGTCTGCG...................................................................................................................................................................................................23110.2730300000000
...............................CGGTGTTTGAAAAGGTTGAGTGAGT........................................................................................................................................................................................................25110.2730100001100
.................................GTGTTTGAAAAGGTTGAGTGAGTCT......................................................................................................................................................................................................25110.2730210000000
...........................................................................................................TACGTCGATGACTTGTTGACTGGT.............................................................................................................................2480.2520000000200
..........................................AAGGTTGAGTGAGTCTGCGAAGCT-C............................................................................................................................................................................................2580.2520200000000
.......................................................................TTCCCTAGAGCTGCTAACGTTATTGG...............................................................................................................................................................2680.2520200000000
.................................GTGTTTGAAAAGGTTGAGT............................................................................................................................................................................................................19120.2530300000000
....................................................................TCATTCCCTAGAGCTGCTAACGTTAT..................................................................................................................................................................2680.2520000001010
.........................................................................................................TTTACGTCGATGACTTGTTGACTGG..............................................................................................................................2580.2520100000010
..........................................................................................................TTACGTCGATGACTTGTTGACTGG..............................................................................................................................2480.2520000000200
........................................................................................................................TGTTGACTGGTGCTGCATGCGTAGC...............................................................................................................2580.2520000000020
........................................................................................................................TGTTGACTGGTGCTGCATGCGTAGAT..............................................................................................................2680.2520000000200
........................................................................................................TTTTACGTCGATGACTTGTTGACT................................................................................................................................2480.2520200000000
...............................................TGAGTGAGTCTGCGAAGCT-CTCATT.......................................................................................................................................................................................2580.2520200000000
.........................................................................................................TTTACGTCGATGACTTGTTGACTGGTGC...........................................................................................................................2880.2520200000000
...............................................................................................................TCGATGACTTGTTGACTGGTGCTGCA.......................................................................................................................2680.2520100000010
..........................................................................................................................TTGACTGGTGCTGCATGCGT..................................................................................................................20130.2330200000010
.........................................................................................GTTATTGGGTCCGACTTTTA...................................................................................................................................................2090.2220100000100
....................................................................................................................GACTTGTTGACTGGTGCTG.........................................................................................................................1990.2220200000000
........................................................................................................................................ATGCGTAGAGGAGCTAAGGGC...................................................................................................2190.2220000000200
...........................................................................CTAGAGCTGCTAACGTTATTGG...............................................................................................................................................................2290.2220200000000
.............................................................................AGAGCTGCTAACGTTATTGGGTCC...........................................................................................................................................................2490.2220200000000
...........................................................................................TATTGGGTCCGACTTTTACGTCGA.............................................................................................................................................2490.2220200000000
.......................................................................................ACGTTATTGGGTCCGACTTT.....................................................................................................................................................2090.2220200000000
...................................................................................................................TGACTTGTTGACTGGTGCTGCA.......................................................................................................................2290.2220200000000
.............................................................................AGAGCTGCTAACGTTATTGGGTCCG..........................................................................................................................................................2590.2220200000000
............................................GGTTGAGTGAGTCTGCGAAGCT-.............................................................................................................................................................................................2290.2220200000000
......................................................................................AACGTTATTGGGTCCGACT.......................................................................................................................................................1990.2220200000000
....................................................................................CTAACGTTATTGGGTCCGACTT......................................................................................................................................................2290.2220200000000
...................................................................................................................TGACTTGTTGACTGGTGCT..........................................................................................................................1990.2220200000000
.................................................................................................................GATGACTTGTTGACTGGTGCTGCATGC....................................................................................................................2790.2220000000200
..............................................................................................TGGGTCCGACTTTTACGTCGATG...........................................................................................................................................2390.2220200000000
....................................................................................................................GACTTGTTGACTGGTGCTGCATG.....................................................................................................................2390.2220200000000
..............................................TTGAGTGAGTCTGCGAAGCT-.............................................................................................................................................................................................2090.2220110000000
droWil2
TGGTACGGTGCCAGCTCCCTTTCTGGCAATACGGTGTTTGACAAAGCTGGGTGAGATGATGGAATT-GTCATTCCCAAAAGCTGCTGAAGTTATCAGACACGATTTTTATGTTGATGACATGTTGACTGGTGCTGGATGCGTTGAGGACCTTCTGGCAATTAAGTCTGAATTGTCACAGGCATTGTTTAA-AGCAGGATTTGATTTAACCAAATGGTTTTTAAATAGTTTTGAAAGCCCCGCT---CCC-TTAGCASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
CGGCACGGCGCCTGCCCCGTTTTAGGCAATAAGGTGCATAACAAAACTAGGTGAGATCTGCGAGTC-ATTATACCATAAAGCTTCTGACGTTACAAGGCAAAACTTTTATGTCGATGATTTACTGACTGGTGCTGCATGCGTAAAGAACCTTCTGACAATTAAGTCTGCAGTGTCGCCAATAATCAAAAA-TGCAGGTTTCGAACTAACCAAATGGTTTTCGAATTCTCCTGAGTTTTCTGCA---ACAAAGG---SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
TGGGACAGCGACTGCTCCATTCTTAGCAATTCGATGTTTGAAACATCTGAGCGACT-TGCATGCTTCCACTCATCCATCTGCTGCAAGATCGTTAGCCCAAGATTTCTATGTTGATGACTTGTTGACAGGAGTAGATAGCGTTGAAGAATTGTGCTTGTTAGATCGACACTTGATAGCAATTCTTCAAGC-GTTTGGGTTTCCTCTCACAAAATGGTCGTCCAATTGTAA----------ACA---ACTTGCAGCASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...............TCCATTCTTAGCAATTCGATGTTT.........................................................................................................................................................................................................................24201.15231400090
...................................................................................................................................GTAGATAGCGTTGAAGAATTG........................................................................................................2111.001100000
........................................................................................................................TGTTGACAGGAGTAGATAGC....................................................................................................................2011.001000100
...................TTCTTAGCAATTCGATGTTTGAAAC....................................................................................................................................................................................................................2511.001000010
........................................................................................................................................................................................................TCCTCTCACAAAATGGTCGTCCAATTG.............................27200.80161400020
...............TCCATTCTTAGCAATTCGATGTT..........................................................................................................................................................................................................................23200.70141200020
........................................................................................................................................................................................................TCCTCTCACAAAATGGTCGTCCAA................................24200.60121200000
........................................................................................................TTCTATGTTGATGACTTGTTGACAGG..............................................................................................................................26170.5910810010
........................................................................................................................................................................................................TCCTCTCACAAAATGGTCGTCCA.................................23200.50101000000
........................................................................................................................................................................................................TCCTCTCACAAAATGGTCGTCCAAT...............................25200.5010900010
......................................................................................................................................................................................................TTTCCTCTCACAAAATGGTCG.....................................21200.5010800002
................................................................TTCCACTCATCCATCTGCTGCAAG........................................................................................................................................................................2450.402200000
.........................................................................TCCATCTGCTGCAAGATCGTTAGCCC.............................................................................................................................................................2650.402000020
........................................................................................................................................................................................................TCCTCTCACAAAATGGTCGTCCAATTGTA...........................29200.357700000
.................................................................................................................................................................................................................AAAATGGTCGTCCAATTGTAA----------AC..............23200.306400200
..........................................................................................................................................................................................................CTCTCACAAAATGGTCGTCCAATT..............................24200.255500000
........................................................................................................................................................................................................TCCTCTCACAAAATGGTCGT....................................20200.255400001
...............TCCATTCTTAGCAATTCGATG............................................................................................................................................................................................................................21200.255500000
.........................................................................................................................................................................................................CCTCTCACAAAATGGTCGTCC..................................21200.255300011
..........................................................................................................................................................................................................CTCTCACAAAATGGTCGTCCAATTGT............................26200.255500000
.......................................................................................................................................................................................................TTCCTCTCACAAAATGGTCGT....................................21200.204200101
................................................................TTCCACTCATCCATCTGCTGCAAGATCG....................................................................................................................................................................2850.201100000
................................................................TTCCACTCATCCATCTGCTGCAAGA.......................................................................................................................................................................2550.201010000
.................................................................TCCACTCATCCATCTGCTGCAAGATCGT...................................................................................................................................................................2850.201100000
...............TCCATTCTTAGCAATTCGATGT...........................................................................................................................................................................................................................22200.204300010
.................................................AGCGACT-TGCATGCTTCCACT.........................................................................................................................................................................................21200.204400000
............................................................................ATCTGCTGCAAGATCGTTAGC...............................................................................................................................................................2150.201001000
.........................................................................TCCATCTGCTGCAAGATCGTTAGCCCA............................................................................................................................................................2750.201100000
........................................................................................................................................................................................................TCCTCTCACAAAATGGTCGTCC..................................22200.204000040
.................................................................................................................................................................................................TTGGGTTTCCTCTCACAAAATGGTCGTC...................................28160.193200001
....................................................................ACTCATCCATCTGCTGCAAGATC.....................................................................................................................................................................2360.171100000
.........................................................................................................................................................................................................CCTCTCACAAAATGGTCGTCCAAT...............................24200.153200100
........................................................................................................................................................................................................TCCTCTCACAAAATGGTCGTCCAATTGT............................28200.153300000
............TGCTCCATTCTTAGCAATTCGATG............................................................................................................................................................................................................................24200.153300000
...GACAGCGACTGCTCCATTCTT........................................................................................................................................................................................................................................21200.153300000
.........................................................................................................................................................................................................CCTCTCACAAAATGGTCGTCCAATTG.............................26200.153300000
........................................................................................................................................................................................................TCCTCTCACAAAATGGTCGTC...................................21200.153200100
.......................................................T-TGCATGCTTCCACTCATCCATC.................................................................................................................................................................................2370.141100000
.............................................................................TCTGCTGCAAGATCGTTAGCC..............................................................................................................................................................2170.141100000
.................................................................................................................................................................................................TTGGGTTTCCTCTCACAAAATGGTCGT....................................27170.122200000
.........................................................................................................TCTATGTTGATGACTTGTTGACA................................................................................................................................23170.122200000
..................................................................................................................................................................................................TGGGTTTCCTCTCACAAAATGGTCG.....................................25170.122200000
.........................................................................................................TCTATGTTGATGACTTGTTGACAGG..............................................................................................................................25170.122200000
................CCATTCTTAGCAATTCGATGTTT.........................................................................................................................................................................................................................23200.102200000
..........................................................................................................................................................................................................CTCTCACAAAATGGTCGTC...................................19200.102000200
.........................................................................................................................................................................................................CCTCTCACAAAATGGTCGTCCAATT..............................25200.102200000
....................................................GACT-TGCATGCTTCCACTCAT......................................................................................................................................................................................21200.102200000
......................................................CT-TGCATGCTTCCACTCATCC....................................................................................................................................................................................21200.102200000
.................................................................................................................................................................................................................AAAATGGTCGTCCAATTGTAA----------A...............22200.102000200
...........................................................................................................................................................................................................TCTCACAAAATGGTCGTCCAATTGTA...........................26200.102200000
.......................................................T-TGCATGCTTCCACTCATCC....................................................................................................................................................................................20200.102200000
..................................................GCGACT-TGCATGCTTCCACTCATCCA...................................................................................................................................................................................26200.102200000
...................................................CGACT-TGCATGCTTCCACTCAT......................................................................................................................................................................................22200.102200000
.................................................................................................................................................................................................................AAAATGGTCGTCCAATTGTAA----------ACA---AC........26200.102100010
............................................................................................................................................................................................................CTCACAAAATGGTCGTCCAAT...............................21200.102200000
..................................................GCGACT-TGCATGCTTCCACTCAT......................................................................................................................................................................................23200.102200000
..................ATTCTTAGCAATTCGATGTT..........................................................................................................................................................................................................................20200.102200000
.............GCTCCATTCTTAGCAATTCGA..............................................................................................................................................................................................................................21200.102200000
...................................................................................................AAGATTTCTATGTTGATGACTTGTT....................................................................................................................................25130.081100000
...................................................................................................AAGATTTCTATGTTGATGACTTGTTGAC.................................................................................................................................28130.081100000
......................................................................................................................................GATAGCGTTGAAGAATTGTGC.....................................................................................................21140.071000001
................................................................................................................................................................................................TTTGGGTTTCCTCTCACAAAATGGTC......................................26170.061000010
.................................................................................................................................................................................................TTGGGTTTCCTCTCACAAAATGGTCG.....................................26170.061100000
.................................................................................................................................................................................................TTGGGTTTCCTCTCACAAAATGGTC......................................25170.061100000
........................................................................................................TTCTATGTTGATGACTTGTTGACA................................................................................................................................24170.061100000
....ACAGCGACTGCTCCATTCTTC.......................................................................................................................................................................................................................................21200.051100000
.............................................................................................................................................................................................................TCACAAAATGGTCGTCCAATT..............................21200.051100000
...............TCCATTCTTAGCAATTCGATGTTC.........................................................................................................................................................................................................................24200.051000010
.......................................................................................................................................................................................................TTCCTCTCACAAAATGGTCGTCCAAT...............................26200.051100000
.............................................................................................................................................................................................................TCACAAAATGGTCGTCCAATTG.............................22200.051000001
.......................................................T-TGCATGCTTCCACTCATCCA...................................................................................................................................................................................21200.051100000
......AGCGACTGCTCCATTCTTAGCAA...................................................................................................................................................................................................................................23200.051100000
..GGACAGCGACTGCTCCATTCTTAGCA....................................................................................................................................................................................................................................26200.051100000
..................ATTCTTAGCAATTCGATGTTC.........................................................................................................................................................................................................................21200.051000010
..................................................................................................................................................................................................................AAATGGTCGTCCAATTGTAA----------A...............21200.051000100
...........................................................................................................................................................................................................TCTCACAAAATGGTCGTCCAATTGT............................25200.051010000
..............CTCCATTCTTAGCAATTCGATGTTT.........................................................................................................................................................................................................................25200.051000010
......AGCGACTGCTCCATTCTTAGCAAT..................................................................................................................................................................................................................................24200.051100000
.................................................AGCGACT-TGCATGCTTCCAC..........................................................................................................................................................................................20200.051100000
.............GCTCCATTCTTAGCAATTCGAT.............................................................................................................................................................................................................................22200.051100000
............TGCTCCATTCTTAGCAATTCGATGTTTC........................................................................................................................................................................................................................28200.051100000
........................................................................................................................................................................................................TCCTCTCACAAAATGGTCG.....................................19200.051100000
......AGCGACTGCTCCATTCTTAGC.....................................................................................................................................................................................................................................21200.051100000
..............................................................................................................................................................................................................CACAAAATGGTCGTCCAATTG.............................21200.051000010
.................CATTCTTAGCAATTCGATGTT..........................................................................................................................................................................................................................21200.051100000
................CCATTCTTAGCAATTCGATGTT..........................................................................................................................................................................................................................22200.051100000
...........CTGCTCCATTCTTAGCAATTC................................................................................................................................................................................................................................21200.051100000
...........CTGCTCCATTCTTAGCAATT.................................................................................................................................................................................................................................20200.051100000
..........................................................................................................................................................................................................CTCTCACAAAATGGTCGTCCAATTG.............................25200.051100000
.....................................................................................................................................................................................................................TGGTCGTCCAATTGTAA----------ACA---A.........21200.051100000
...............................................................................................................................................................................................................ACAAAATGGTCGTCCAATTGTA...........................22200.051000001
................................................................................................................................................................................................................CAAAATGGTCGTCCAATTGTA...........................21200.051100000
......................................................CT-TGCATGCTTCCACTCATC.....................................................................................................................................................................................20200.051100000
..........................................................................................................................................................................................................CTCTCACAAAATGGTCGTCCAATTGTAA----------A...............29200.051100000
.........................................................TGCATGCTTCCACTCATCCA...................................................................................................................................................................................20200.051100000
.....CAGCGACTGCTCCATTCTT........................................................................................................................................................................................................................................19200.051100000
....ACAGCGACTGCTCCATTCTTG.......................................................................................................................................................................................................................................21200.051100000
.............................................................................................................................................................................................................TCACAAAATGGTCGTCCAAT...............................20200.051000100
...................................................................................................................................................................................................................AATGGTCGTCCAATTGTAA----------AC..............21200.051100000
..............................................................................CTGCTGCAAGATCGTTAGCC..............................................................................................................................................................20200.051001000
...........................................................................................................................................................................................................TCTCACAAAATGGTCGTCCAATTG.............................24200.051100000
......................................................................................................................................................................................................TTTCCTCTCACAAAATGGTCGTCC..................................24200.051100000
............TGCTCCATTCTTAGCAATTCGATGT...........................................................................................................................................................................................................................25200.051100000
.....CAGCGACTGCTCCATTCTTAG......................................................................................................................................................................................................................................21200.051000100
.......................................................................................................................................................................................................TTCCTCTCACAAAATGGTCGTCCAA................................25200.051100000
..........................................................................................................................................................................................................CTCTCACAAAATGGTCGTCCAA................................22200.051100000
......................................................................................................................................................................................................TTTCCTCTCACAAAATGGTC......................................20200.051100000
......................................................................................................................................................................................................................GGTCGTCCAATTGTAA----------AC..............18200.051000100
........................................................................................................................................................................................................TCCTCTCACAAAATGGTC......................................18200.051100000
.......GCGACTGCTCCATTCTTAGC.....................................................................................................................................................................................................................................20200.051100000
.......................................................................................................................................................................................................TTCCTCTCACAAAATGGTCGTCC..................................23200.051000010
.......................................................................................................................................................................................................TTCCTCTCACAAAATGGTCGTCCAATTG.............................28200.051100000
......................................................................................................................................................................................................TTTCCTCTCACAAAATGGTCGTCCAATTG.............................29200.051100000
droGri2
TGGAACAGCCTCAGCGCCATACTTAGCCATACGCATCCTGCATTATTTG-GCAAATCTGTGTCGAACTGAGTATCCAATCGGTGCTGCAGTCATTGCATCGTCGTTCTATGTAGATGACCTGTTATCTGGAGGTGAGGACATAGAAAATCTTCGCACAATCAAGGATCAAGTCACGAAAATTCTTCATCG-TGGTCACTTTCCGTTATCTAAGTGGCATTCAAATCATGCCCAATTTATCGAAAACTTCGTTATCASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.........................................................TGTGTCGAACTGAGTATCCAATCGG..............................................................................................................................................................................25200.05101
droAna3
TGGCACTGCACCAGCCCCATTCCTGGCCATAAGGTGTTTGAAGAGGTTGAGTGAATCCGCGAAAAA-TACATTCCCTCGAGCTGCTAAAGTTATTGGGTCTGACTTTTACGTCGACGACTTGTTAACGGGTGCTGGTTGCGTGGAGGAGCTAAAGACAATTAAGTCTGAAGTAACTCAGGTTCTTCAAAA-CGCTGGGTTTGAATTGAGCAAGTGGTTTTCAAACTCGCCTGAAGTTACTGCA---TCCGAGAGCASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................................................................................................TCGACGACTTGTTAACGGGTGCTG.........................................................................................................................2430.672200000
....................................................................................................................GACTTGTTAACGGGTGCTGGTTG.....................................................................................................................2330.331010000
..................................................................................TGCTAAAGTTATTGGGTCTGACTTT.....................................................................................................................................................25200.204400000
..............................................................................................TGGGTCTGACTTTTACGTCGA.............................................................................................................................................21200.153000003
.......................................................................................................................TTGTTAACGGGTGCTGGTTGC....................................................................................................................2170.141010000
...................................................................................................................................................................................................................................GCCTGAAGTTACTGCA---TCCGAGAGC.25200.102011000
.........................................................................................................................GTTAACGGGTGCTGGTTGCGTGGAGG.............................................................................................................26200.102200000
...........................................................................................................................................................................................................................TCAAACTCGCCTGAAGTTACTGCA---TCC.......27200.102020000
.................................................................................................................................................................................................................................TCGCCTGAAGTTACTGCA---TCCGA.....23200.102020000
..........................................................................................................................................................................................................................TTCAAACTCGCCTGAAGTTACTGCA---TC........27200.102020000
............................................................................................................................AACGGGTGCTGGTTGCGTGGA...............................................................................................................21200.051100000
...........................CATAAGGTGTTTGAAGAG...................................................................................................................................................................................................................18200.051100000
........................................................................................................................................................................................................TGAATTGAGCAAGTGGTTTTCA..................................22200.051000010
.......................................................TCCGCGAAAAA-TACATTCCCTCGAG...............................................................................................................................................................................25200.051010000
.................................................................................................................................................................................AGGTTCTTCAAAA-CGCTGGGTTTGAA....................................................26200.051100000
...............................................................................................................................GGGTGCTGGTTGCGTGGAGGA............................................................................................................21200.051100000
.................................................................................................................................................................................AGGTTCTTCAAAA-CGCTGGGTTTG......................................................24200.051100000
............................ATAAGGTGTTTGAAGAGGTTGAGT............................................................................................................................................................................................................24200.051010000
.................................................................................................................................................................................................................CAAGTGGTTTTCAAACTCGCCTG........................23200.051100000
.....................................................................................................................................................................................................GTTTGAATTGAGCAAGTG.........................................18200.051100000
...................................................................................................................................................................................................GGGTTTGAATTGAGCAAGTGG........................................21200.051100000
................................................................................................................................................................................CAGGTTCTTCAAAA-CGCTGGGTTTGAA....................................................27200.051100000
....................................................................................................................................................................................................................................CCTGAAGTTACTGCA---TCCGAGA...22200.051010000
................................................................................................................................................................................................................GCAAGTGGTTTTCAAACTCGCCT.........................23200.051010000
....................................................................................................................................................................................................................GTGGTTTTCAAACTCGCCTGAAGTTA..................26200.051100000
........................................................................TCCCTCGAGCTGCTAAAGTTATTGG...............................................................................................................................................................25200.051100000
........................................................................................................................................................................................................TGAATTGAGCAAGTGGTTTTCAAACT..............................26200.051010000
..........................................................................................................................................GCGTGGAGGAGCTAAAGACAATT...............................................................................................23200.051010000
droBip1
TGGCACTGCACCAGCCCCATTCCTGGCCATAAGGTGTTTGAAGAGGTTGAGTGAATCTGTGAAAAA-TACATTCCCTCGAGCTGCCAAAGTTATTGGGTCCGACTTTTACGTCGACGACATGTTAACGGGTGCTGGTTGCATTGAGGAGCTAAAGACAATTAAGTCTGAAGTAACTCAGGTTCTTCAAAA-CGCTGGGTTTGAATTGAGCAAGTGGTTTTCAAACTCGCCTGAAGTTACTGCA---TCCGAGAGCASizeHit CountTotal NormTotal
No Reads
droKik1
TGGTACTGGACAAGCCCCTTTTCTGGCTATTCGGTGTTTAGAAAGGTTAAGTGAATCTGCGAAACT-TTCATTCCCTAGAGCTGCCGACGTAATTGGATCCGATTTTTACGTCGATGACATGCTAACTGGTGCTGCATGCGTAGAGGAGCTACAGACAATCAAGTCTGAAGTGTGTCAGGTTCTTCAAAC-ATCAGGTTTTGAATTGACAAAGTGGTTTTCAAACTCACCTGAGGTCACTGCA---TCTGAGAGCASizeHit CountTotal NormTotal
No Reads
droFic1
TGGAACTGGCCCAGCTCCATATCTAGCGATTCGGTCTTTAAAAAGGTTGAGTGAATCTGCCAAGCT-TTCATTCCCTAGAGCTGCTGAAGTTATTGGATCCGACTTTTACGTCGATGATATGCTAACTGGTGCTGCATGCGTCGAGGAGCTCAGATCTATCAGGTCTGAAGTGTCTCAGGTTCTTCAAAC-CGCAGGGTTTGAATTGACAAAGTGGTTTTCAAACTCACCTGAGGTCACCGCA---TCTGAGAGCASizeHit CountTotal NormTotal
No Reads
droEle1
TGGTTCTGGACCAGCCCTATTTCTAGCTATTCGGTGTTTAAGAAGGTTGAGTGAG-CTGCAAAACT-TTCATTCTCTAGAGCTTCTAAAGTTATTGGATCCGTCTTTTACGTCGATGATATGTTGAGTGGTGCTGAATGCGTAGATGAGCTAAAGACTATTAAGTCTGTAGTGTCTCAGGTTCTTCAAAC-AGCAGGATTTGAATTAACAAAGTGGTTTTCTAACTCACCTGAAGTCACCGCA---TCTAAGAACASizeHit CountTotal NormTotal
No Reads
droRho1
TGGTACTGGACCAGCCCCGTTTTTGGCTATTCGGTGTTTAAAAAGGTTAAGTGAGTCTGCCAAAGT-TTCTTTTCCTAGAGCTGCTAAGGTTATTGGATCCGACTTTTATGTCGATGATATGTTGACTGGTGCTGCATGCGTAGAGGAGTTAAAGGCTATTAAGTCTGAAGTATCTCAGGTTCTTCAAAC-TGCAGGTTTTGAATTGACAAAGTGGTTTTCAAACTCACCTGACGTTACCGCA---TCTGAGAGCASizeHit CountTotal NormTotal
No Reads
droBia1
--------------------------------------------GGTTAAAAGAGTCTGCCAAACT-TTGTTTTACTAGAGCTGGGTAAGTTATTGGATACGACCTTTATGTCAGTGACATGTTGACTGTTGCTGCCTGCATAGAGGAGTTAAAGACTTTTATGTCTGAAGTTTCTCAGGTTCTTCAAAC-TGGAGGTATTGAATTGACAAAGTGGTTTTCAAATTCACCTGACGTCACCGCA---TATGAGAGAASizeHit CountTotal NormTotal
No Reads
droTak1
TGGGACTGGACCAGCCCCATTTCTGGCAATTCGGTGTTTAAAAAGGTTAAGCGAGTCTGCCAAACT-TTCTTTTCCTAGAGCTGCTGAAGTTATTGGATCCGACTTTTATGTCGATGACATGTTGACTGGTGCTGCATGCGTAGAGGAGTTAAAGACTATTAAGTCTGAAGTGTCTCAGGTTCTTCAAAC-TGCAGGTTTTGAATTGACAAAGTGGTTTTCAAACTCACCTGACGTCACCGCA---TCTGAGAGCASizeHit CountTotal NormTotal
No Reads
droEug1
TGGAACTTTGCCAGCTCCGTTTATGGTGATCCGGTGTTTAATGCAGCTTGGAGAGATGGCGCAAGC-TAAGT-A-AGTAAGCTGCGAAAGTCATTCAGAAAGATTTCTATGTTGACAATATGTTGACAGGCGCCGGAAGCGTTGAGAACCTGCAAAGCCTCGTG-ATGAAGTTTCTTTGATT-TGCAAGA-GGCAGGTTTTGAATTGGCAAAGTGGTTTTCGAACTGCCCAGAGATCTCCGCA---TCTGAGAGCGSizeHit CountTotal NormTotal
No Reads
dm3
TGATACTAGACTAGCCCCATTTCTGCCTATTCGGTGTTTATAACTTTTGAATTCGGCATGAAAATT-TGCATTCCCTAGAGCTGCCGACGTTATTGGATCCGATTTTTACGTCGATGACCTGTTAAATGGTACTGCATGCGTAAAGGAGCTAAAAACAATTAAGTCTGAAGTGTCTCAGGTTCTTTAAAA-AGCAGGATTTGAATTGACGAAGTGGTTTTCAAACTCACCTGAGGTCACTGCA---TTTGAGAGCASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
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......................................................................................................................................................................................................................GGTTTTCAAACTCACCTGAGGTCA..................2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................CCTAGAGCTGCCGACGTTATT.................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
........................................................................TCCCTAGAGCTGCCGACGTT....................................................................................................................................................................2020.5010000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................ATTTGAATTGACGAAGTGGT.......................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................CCCTAGAGCTGCCGACGTTATT.................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
...........................................................................CTAGAGCTGCCGACGTTATTGGA..............................................................................................................................................................2320.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................TTTTCAAACTCACCTGAGGT....................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................TTCCCTAGAGCTGCCGACGTTA...................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..........................................................................................................TTACGTCGATGACCTGTTAA..................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...............................................................................................................................................................TTAAGTCTGAAGTGTCTCAGGAAA.........................................................................2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
..................................................................................................................................................................................................................AAGTGGTTTTCAAACTCACCTGAGGTC...................2720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................TGCATTCCCTAGAGCTGCCGA........................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................TTTGAATTGACGAAGTGGTA......................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................ATTTTTACGTCGATGACCTGT.....................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................GACGAAGTGGTTTTCAAACTCACCTGA.......................2720.5010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................TGGTTTTCAAACTCACCTGAGGT....................2320.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............................................................................AGCTGCCGACGTTATTGGAT.............................................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................TGAATTGACGAAGTGGTTTTC...................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
droSim2
--------------------------CTATTCGGTGTTTAAAGAGGTTGAGTGAATCTGCTAAATG-TTCATTCCCTAGAGCTGCCGACGTGATTGGATCCGATTTTTACGTCGATGACATGTTAACTGGTGCTGCATGCGTAGAGGAGCTAAAGACAATTAAGTCTGAAGTGTCTCAGGTTCTTCAAAC-AGCAGGTTTTGAATTGACAAAGTGGTTTTCAAACTCACCTGAGGTCACTGCA---TCTGAGAGCASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..................................................................................................................................TGCTGCATGCGTAGAGG.............................................................................................................1730.33100000001000000000
droSec2
TGGTACTGCACCAGCCCCATTTCTGGGTATACGGTGTTTAAAAAGGTTGAGTGAGC-------------CATTTCCTAGAGCTGCCGACGTCATTGGATCCGACTTTTAAGTCGATGACATGGTAACTAGTGCTGCATGCGTAGATGAGCTAAATACAATTAAGTCTATGTT-------CCT-AGCAAAACTG-TCAGTTTAAGCTTATAAA-TTATATTCAAAGTCG----AAA-------------GTAGCGTASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
TGGTACTGGACCAGCCCCATTTCTGGCTATTCGGTGTTTAAAGAGGTTGAGTGAATCTGCTAAATT-TTCATTTCCTAGAGCAGCCGACGTAATTGGATCCGATTTTTACGTCGATGACATGTTAACTGGTGCTGCATGCGTAGAGGAGCTAAAGACAATTAAGTCTGAAGTGTCTCAGGTTCTTCAAAC-AGCAGGTTTTGAATTGACAAAGTGGTTTTCAAACTCACCTGAGGTCACTGCA---TCTGAGAGCASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
......................................................ATCTGCTAAATT-TTCATTTCCTAGAGCA.............................................................................................................................................................................2811.00101000000000
....................................................................................................................................................................................................................GTGGTTTTCAAACTCACCTGAGGT....................24200.7014000000000014
........................................................................................................................TGTTAACTGGTGCTGCATGCGTAGAG..............................................................................................................26200.10202000000000
........................................................................................................................TGTTAACTGGTGCTGCATGCGTAGAGG.............................................................................................................27200.10202000000000
...................................................................................................................TGACATGTTAACTGGTGCTGCAT......................................................................................................................23200.10202000000000
........................................................................................................................................................................................................TGAATTGACAAAGTGGTTTTCAAACT..............................26200.10202000000000
...........................................................................................................TACGTCGATGACATGTTAACTGGTGC...........................................................................................................................26200.10200200000000
...........................................................................................................................................................................TGTCTCAGGTTCTTCAAAC-AGCAGGT..........................................................26200.10200000000002
......TGGACCAGCCCCATTTCTGGCTATTCGG..............................................................................................................................................................................................................................28200.05101000000000
..............................................................................................................GTCGATGACATGTTAACTGGTGCTGCA.......................................................................................................................27200.05101000000000
................................................................................................................................................................TAAGTCTGAAGTGTCTCAGGTTCTTCA.....................................................................27200.05101000000000
....................TTCTGGCTATTCGGTGTTTAAAGAG...................................................................................................................................................................................................................25200.05100000010000
.....................TCTGGCTATTCGGTGTTTAAAGAGG..................................................................................................................................................................................................................25200.05101000000000
...........................................................................................................................TAACTGGTGCTGCATGCGTAGAGGA............................................................................................................25200.05100100000000
................................GGTGTTTAAAGAGGTTGAGTGA..........................................................................................................................................................................................................22200.05101000000000
................................................................................................................................................AGGAGCTAAAGACAATTAAGTCTGAAG.....................................................................................27200.05101000000000
..............................TCGGTGTTTAAAGAGGTTGAGTG...........................................................................................................................................................................................................23200.05100000010000
.......................TGGCTATTCGGTGTTTAAAGAGG..................................................................................................................................................................................................................23200.05101000000000
...................TTTCTGGCTATTCGGTGTTTAAAGAGG..................................................................................................................................................................................................................27200.05101000000000
...................................................................................................................................................................................................................................ACCTGAGGTCACTGCA---TCTGAG....22200.05101000000000
.....................................................................................................................................................................CTGAAGTGTCTCAGGTTCTTCAAAC-AG...............................................................27200.05101000000000
..............................................................................................................................................................................CTCAGGTTCTTCAAAC-AGCAGGT..........................................................23200.05101000000000
....................TTCTGGCTATTCGGTGTTTAAAGAGGT.................................................................................................................................................................................................................27200.05100100000000
.......................................................................................................................................................................................TTCAAAC-AGCAGGTTTTGAATTGACA..............................................26200.05100100000000
.........................................................................................................................................................................................................GAATTGACAAAGTGGTTTTCAAACT..............................25200.05101000000000
.........................................................................................................TTTACGTCGATGACATGTTAACTGGTGC...........................................................................................................................28200.05100100000000
.......................................................................................................................................CATGCGTAGAGGAGCTAAAGACAAT................................................................................................25200.05101000000000
.............................................................................................................................................TAGAGGAGCTAAAGACAATTAAGTCT.........................................................................................26200.05101000000000
...........................................................................................................................................................................................................................TCAAACTCACCTGAGGTCACTGCA---T.........25200.05101000000000
..........................................................................................................................................................................................................................TTCAAACTCACCTGAGGTCACTGCA---..........25200.05101000000000
TGGTACTGGACCAGCCCCATTTCTGG......................................................................................................................................................................................................................................26200.05101000000000
droEre2
TGGTACTGGACCAGCCCCATTGCTGGCTATTCGGTGTTTTAAAAGGGTGAGTGAATCTGCAAGATT-TTCATTTCCTAGAGCTGCCGACTTAATTGGATCAGATTTTTACGTCGATGACATGTTAACTGGTGCTGCATGCGTAAAGGAGCTAATGACAATGTAGTCTGAAGTGTCTCAGATTCTTCAAGC-AGCA-GTTTTGAATTGACAAAGTGGTTTTTAAACTCACCTGAGATCACTGCA---TTTGAGAGCASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 06/08/2015 at 03:17 PM