dpe_819

Name	Class	Family	Strand
Nobel_I-int	LTR	Pao	-

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------################################################## TTTAAATCAGATCCAAATTGTTTAGGCAACTCCTTTGAGGTTGCGAAACGGCGGTTTTTGTCGCTTGAAAGACGATTGCATCGTGACCCTGAGTTGAAGAAAATGTACTTGGAATTCATGGAAGAGTACCTCTCCTTAGATCATATGTCTCCTACTGACAATACGATTCCTTCTACTCCACACTACGTAATCTCTCATCAGTGTGTTCTGAGGCCCCAAAGTACGTATACCAAGCTCCGAGTCGTGTTCGA **********************************************************..((................((((((..((((((............))))))...))))))....))**************************************************************************************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M042 female body	V050 head	V111 male body
......................................................................................................ATGTACTTGGAATTCATGGAAGAGT............................................................................................................................	25	0	20	3.75	75	75	0	0
......................................................................................................ATGTACTTGGAATTCATGGAAG...............................................................................................................................	22	0	20	0.55	11	11	0	0
............................................................TCGCTTGAAAGACGATTGCATCGT.......................................................................................................................................................................	24	0	20	0.40	8	8	0	0
.......................................................................................................................................................................TCCTTCTACTCCACACTACGTAATCTC.........................................................	27	0	5	0.20	1	1	0	0
.................................................................................................................................................................TACGATTCCTTCTACTCCACACTACG................................................................	26	0	20	0.20	4	4	0	0
..................TGTTTAGGCAACTCCTTCGAGGTTGC...............................................................................................................................................................................................................	26	1	20	0.10	2	2	0	0
.............................................................CGCTTGAAAGACGGTTGCATCGTGA.....................................................................................................................................................................	25	1	20	0.10	2	2	0	0
.........................................................................................................................................................................................................TGTGTTCTGAGGCCCCAAAGTACGT.........................	25	0	20	0.10	2	2	0	0
...........TCCAAATTGTTTAGGCAACTCCTTCGA.....................................................................................................................................................................................................................	27	1	20	0.10	2	2	0	0
.......................................................................................................................................................CTACTGACAATACGATTCCTTCTACT..........................................................................	26	0	20	0.05	1	1	0	0
......................................................................................................................................................................TTCCTTCTCCTCCACACTACGTAA.............................................................	24	1	20	0.05	1	1	0	0
.................................................................................................................ATTCATGGAAGAGTACCTCTC.....................................................................................................................	21	0	20	0.05	1	0	1	0
..................................................................................................................................................GTCTCCTACTGACAATACGATTCCTTC..............................................................................	27	0	20	0.05	1	1	0	0
................................................................................................AAGAAAATGTACTTGGAATTCATGGAA................................................................................................................................	27	0	20	0.05	1	1	0	0
...................................................................................................................................................................................................................................TACCAAGCGCCGAGTCGTGTTCGA	24	1	20	0.05	1	1	0	0
......................................................................................................ATGTACTTGGAATTCATGGAAGAGTAC..........................................................................................................................	27	0	20	0.05	1	1	0	0
.............CAAATTGTATAGGCAACTCCTTT.......................................................................................................................................................................................................................	23	1	20	0.05	1	1	0	0
...................................................................................................................................................................................................................................TACCAAGCTCCGAGTCGTG.....	19	0	20	0.05	1	1	0	0
...................................................................................................................................................................................................................................TACCAAGCTCCGAGTCGTGA....	20	1	20	0.05	1	1	0	0
.TTAAATCAGATCCAAATTGTTTAGG.................................................................................................................................................................................................................................	25	0	20	0.05	1	1	0	0
......................................................TTTTTGTCGCTTGAAAGGCGA................................................................................................................................................................................	21	1	20	0.05	1	0	0	1
................................................................................................................................................................ATACGATTCCTTCTACTCCACACTACG................................................................	27	0	20	0.05	1	1	0	0

AAATTTAGTCTAGGTTTAACAAATCCGTTGAGGAAACTCCAACGCTTTGCCGCCAAAAACAGCGAACTTTCTGCTAACGTAGCACTGGGACTCAACTTCTTTTACATGAACCTTAAGTACCTTCTCATGGAGAGGAATCTAGTATACAGAGGATGACTGTTATGCTAAGGAAGATGAGGTGTGATGCATTAGAGAGTAGTCACACAAGACTCCGGGGTTTCATGCATATGGTTCGAGGCTCAGCACAAGCT **************************************************************************************************************************..((................((((((..((((((............))))))...))))))....))**********************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M042 female body	M021 embryo	V111 male body	V042 embryo	V050 head	V057 head
.........................................................................................................................................................TGACTGTTATGCTAAGGAAGATGA..........................................................................	24	0	20	0.20	4	4	0	0	0	0	0
..............................................TTGCCGCCAAAAACAGCGAACTTT.....................................................................................................................................................................................	24	0	20	0.20	4	4	0	0	0	0	0
..............................................................CGAACTTTCTGCTAACGTAGCACTG....................................................................................................................................................................	25	0	20	0.15	3	0	3	0	0	0	0
......................................................................................................................................................GGATGACTGTTATGCTAAGGAAGATG...........................................................................	26	0	20	0.10	2	2	0	0	0	0	0
........................................................................................................................................................ATGACTGTTATGCTAAGGAAGATG...........................................................................	24	0	20	0.10	2	0	2	0	0	0	0
...........................................................CAGCGAACTTTCTGCTAACGTAGCACT.....................................................................................................................................................................	27	0	20	0.10	2	1	1	0	0	0	0
.................................................................................................................................................ACAGAGGATGACTGTTATG.......................................................................................	19	0	20	0.10	2	0	0	2	0	0	0
................................................................................................................................................................................................AAAGTAGTTACACAAGACT........................................	19	2	15	0.07	1	1	0	0	0	0	0
...................................................GCCAAAAACAGCGAACTTTCT...................................................................................................................................................................................	21	0	20	0.05	1	0	0	0	1	0	0
........................................................................................................................................................ATGACTGTTATGCTAAGGAAGATGA..........................................................................	25	0	20	0.05	1	1	0	0	0	0	0
........................................................................................AACTCAACTTCTTTTACATGAACC...........................................................................................................................................	24	1	20	0.05	1	1	0	0	0	0	0
......................................................................................................................................................GGATGACTGTTATGCTAA...................................................................................	18	0	20	0.05	1	1	0	0	0	0	0
........................................................................................................................................................ATGACTGTTATGCTAAGGAA...............................................................................	20	0	20	0.05	1	0	1	0	0	0	0
...........................................................................................................................................................ACTGTTATGCTAAGGAAGATG...........................................................................	21	0	20	0.05	1	1	0	0	0	0	0
..................ACAAATCCGTTGAGGAAACT.....................................................................................................................................................................................................................	20	0	20	0.05	1	1	0	0	0	0	0
.......................................................................................................................................................................................................TCACACAAGACTCCGGGGTTTCAT............................	24	0	20	0.05	1	1	0	0	0	0	0
............GGTTTAACAAATCCGTTGAGGAAA.......................................................................................................................................................................................................................	24	0	20	0.05	1	1	0	0	0	0	0
..........................................................................................................................................................GACTGTTATTCTAAGGAAGATGA..........................................................................	23	1	20	0.05	1	1	0	0	0	0	0
...................................................................................................................................................AGAGGATGACTGTTATGCTAAGGAAGAT............................................................................	28	0	20	0.05	1	0	1	0	0	0	0
.........................................................................................................................................................................GAAGATGAGGTGTGATGCATT.............................................................	21	0	20	0.05	1	0	0	1	0	0	0
..................................................................................AACTGGGACTCAACTTCTTTTACATGA..............................................................................................................................................	27	1	20	0.05	1	1	0	0	0	0	0
.......................................................................................................................................................GATGACTGTTATGCTAAGGAAGATG...........................................................................	25	0	20	0.05	1	1	0	0	0	0	0
.....................................................................................................................................................................................................AGTCACACAAGACTCCGGGGTTTCAT............................	26	0	20	0.05	1	1	0	0	0	0	0
............................................................................................................................................AGTATACAGAGGATGACTG............................................................................................	19	0	20	0.05	1	0	0	0	1	0	0
.................................................CCGCCAAAAACAGCGAACTT......................................................................................................................................................................................	20	0	20	0.05	1	0	0	0	0	1	0
........................................................................................................................................................................................................CACACAAGACTCCGGGGTTTC..............................	21	0	20	0.05	1	0	1	0	0	0	0
...........................................................................................TCAACTTCTTTTACATGAAC............................................................................................................................................	20	0	20	0.05	1	1	0	0	0	0	0
...............................................TGCCGCCAAAAACAACGAACTTT.....................................................................................................................................................................................	23	1	20	0.05	1	1	0	0	0	0	0
.........................................................................................................................................................TGACTGTTATGCTAAGGAAGATG...........................................................................	23	0	20	0.05	1	1	0	0	0	0	0
...........................................................................................TCAACTTCTTTTACATGAACC...........................................................................................................................................	21	0	20	0.05	1	1	0	0	0	0	0
..................................................................................................................................................CAGAGGATGACTGTTATGCT.....................................................................................	20	0	20	0.05	1	0	0	0	0	0	1
.......................................................................................................................................................................AGGAAGATGAGGTGTGATG.................................................................	19	0	20	0.05	1	0	0	1	0	0	0
...............................................................................................................................................................CTATGCTAAGGAAGATGAGGTG......................................................................	22	1	20	0.05	1	1	0	0	0	0	0

Species	Coordinate	ID	Alignment
droPer2	scaffold_152:13210-13460 -	dpe_819	TTTAAATCAGATCCAAATTGTTTAGGCAACTCCTTTGAGGTTGCGAAACGGCGGTTTTTGTCGCTTGAAAGACGATTGCATCGTGACCCTGAGTTGAAGAAAATGTACTTGGAATTCATGGAAGAGTACCTCTCCTTAGATCATATGTCTCCTACTGACAATACGATTCCTTCTACTCCACACTACGTAATCTCTCATCAGTGTGTTCTGAGGCCCCAAAGTACGTATACCAAGCTCCGAGTCGTGTTCGA
dp5	Unknown_group_112:20-270 +		TTTAAATCAGATCCAAATTGTTTAGGCAACTCCTTTGAGGTTGCGAAACGGCGGTTTTTGTCGCTTGAAAGACGATTGCATCGTGACCCTGAGTTGAAGAAAATGTACTTGGAATTCATGGAAGAGTACCTCTCCTTAGGTCATATGTCTTCTACTGACAATACGATTCCTTCTACTCCACACTACGTAATCCCTCATCAGTGTGTTCTGAGGCCCCAAAGTACGTCTACCAAGCTCCGAGTCGTGTTCGA
droWil2	scf2_1100000004958:354294-354544 +		TTTAAGTTGAGCCCCGATGCACTTGGGCTTTCATTTGAAGTTGCTAAACGGCGGTTTTTGTCGCTCGAAAGAAGATTGTCGAAAGATGTGGAATTAAGAAACATGTATCTAGAATTTATGGAAGAATATCTTTCATTGGGACACATGTCAAAAACCGATAATAAAATTGCCACTCATCCACACTATTTCATTCCACATCAGGTAGTTTTAAGACCTCAAAGCACGTCGACGAAACTTCGTGTTGTATTCGA
droVir3	scaffold_12728:302902-303147 -		TTTAAATCAGATCCCAGCTTA---G--TACTCCTTCGAGGTTGCTAAGCGTCGTTTTATGTCGCTTGAAAGACGCTTCTGCCGAGATCCCCAGCTTAAGCGCATGTACTTGGAGTTCATGGAGGAATATTTAACTTTAGGTACCATGTTTGAAAGAGATGATCAGATTCCAAGTATTTCACACTACTTCATTCCGCACCAGTGTGTTTTAAGACCACAAAGCACATCGACAAAGTTACGCGTTGTTTTTGA
droMoj3	scaffold_6541:330014-330262 -		TTCAAATCAAGCCCACATTGTCTTGGTACGTCTTATGACACAGCCAAGCGACGATTTCTGGCCTTGGAAAGAAGAATGAGCAAGCAAGAAGACATTCGGCGAATGTACATTGACTTTATGAAAGAATACTTGGCCTTGGGTCACATGAGCCCAACTAACAATCAAATTCCGAGAGAGCCGCATTATTTCATCCCATATCAATGCGTGCTAAGACCGCACAGTGGAT--ACTAAACTTCGAGTAGTGTTTGA
droGri2	scaffold_5364:2281-2531 -		TTTAAGAACAATCCCAGTCAACTTGGTCATTCATTCGACATAGCACGCCGGAGATTTCTCAGCTTGGAACGCCGTTTGGCACAATCTTCGGAACTTTGCTTACAGTATTGTCAATTCATGGAGGAGTATGAACGTTTAGAACACATGTCGCTGGTCACAGAACCAAACTTATCGGAACCTCACTACTACATACCTCACCATTGCGTTTTGAAGCCCAGCAGTGAAACCACAAAGCTTCGAGTGGTCTTCGA
droAna3	scaffold_12926:126214-126464 +		TTTAAGTCGGATCCAAGCGTTTTGGGCAACTCATTCGAGGTAGCCAAACGCCGTTTTTTGTCGCTCGAGAGAAGATTATCTCGAGATCCAAACTTAAAGAAAATGTATGTGGAATTCATGGAAGAATGCGAATCCCTAGGTCATATGTCCCCTGTAAGCAATGAGGTTCTTGCTACTCCACACTACGTCATACCCCACCAGTGTGTCTTGCGGCCGCAAAGTACAACGACCAAGCTTCGAATCGTTTTCGA
droBip1	scf7180000391793:1920-2170 -		TTTAAATCGGATCCAAGCGTTTTGGGAAACTCGTTCGAGGTAGCCAAACGCCGTTTTTTGTCGCTTGAGAGAAGATTATCTCGAGATCCGAATTTAAAGAAAATGTATGTGGAATTTATGGAAGAATACGAATCCTTAGGTCATATGTCCCCTACAAGCAATGATGTTCTTGCTACTCCACACTACGTCATACCCCATCAGTGTGTCTTACGGCCTCAAAGCACATCGACCAAATTACGAGTCGTGTTTGA
droKik1	scf7180000301805:14000-14250 -		TTTAAATCTGATCCAAATGGGTTGGGCAACTCCTTTGAGGTTGCAAAACGGCGGTTTTTGTCGCTTGAGCGAAGGTTGTCTCGAGACCCCAACATGAAGACCATGTACATGGAATTCATGGACGAATATCTCGCCATAGGTCATATGTCGCCTACAGACAATAAAATCCCTTCCACTCCACATTATGTCATCGCTCATCAATGTGTGCTAAGGCCCCAGAGTACGTCTACAAAACTACGCGTCATTTTCGA
droFic1	scf7180000449242:5592-5842 +		TTTAAATCTGATCCAGCTGGTTTGGGCAACTCATTCGAGGTTGTAAAAAGGAGGTTTTTGTCGCTCGAAAGAAGGTTGTCTCGAGATCCTGAATTAAAGAAAATGTATCTCGAAATCATGGAAGAATACCTCGCGTTAGGTCATATGTCTCCTACAGACAATAAAGTTCCTTTGACTCCACATTATGTAATTCCGCATCAGTGTGTCCTTAGGCCCCAGAGTACGTCTACTAAGTTGCGTGTCGTGTTTGA
droEle1	scf7180000490385:73154-73402 +		TTTAAATCTGATCCAAATGGGTTGGGCAATTAATTTGAAGTTGCAAAAGG--GGCTTTTGTCTTTTGAAAGAAACTTGTCTCGAGACCATGAGTTCAAGAAAATGTACTTAGAATTTATGGAAGAGTACCAATCCGTAGGTCTTATGTCTCCCACAGATAACAAAATTCCTTTTACTCCGCTCTATGCCATCCCTCATAAATGTGTTCTTAGGCCCCAGAGTACGTCCACCTAACTGAGGGTCGTTTTTGA
droRho1	scf7180000779440:10831-11078 -		TTTAAATCTGATCCAAATGAGTTAGGCAACTCTTTTGAAGTTGCAAAACGGCGGTTTTTGTCGCTTGAAAGAAGGCTGTCTCGAGACCCTGAGATGAAGAAAATATACTTAGAATTTATGGAGGAGTACCTTTCCTTAGGTCATATGTCTCCTACAGATACT---CTTTCTTCTGCTCCACATTATGTTATCCCACATCAATGTGTTCTGAGACCCCAAAGTACGTCAACCAAGTTACGTGTCGTTTTTGA
droBia1	scf7180000299515:30622-30864 +		TTTAAATCTAATCCAAATAGGTTAGAAAGCTCCT-TGAAGTTGCTGAACCGCTGTTTTTGTCGCTTGAAAGAAGGTTGACTCGAGACCCTGACATGAAAAAAATGTATTTAGAATTCA----AAAGTTCCTTTCTTTAGGTCATATGCCTCCTACAGA---TAAAATTTCTTCTGCTTCACATTATGTTACCCCACCCCAATGTGTTCAGAGACCCCAAAGTACGTCAGCCAAGTTACGTATACTTTTCGA
droTak1	scf7180000413904:7538-7785 +		TTTAAATCTGATCCAAATGGGTTGGGCAACTCCTTTGAAGTTGCAAAACGGCGGTTTTTGTCGCTTGAAAGAAGGTTGTCTCGAGACCCTGACATGAAGAAAATGTATTTAGAATTTATGGAAGAGTACCTTTCCTTAGGTCATATGTCTCCTACAGA---TAAAATTCCTTCTGCTCCACATTATGTTATCCCACACCAATGCGTTCTGAGACCCCAAAGTACGTCAACCAAGTTACGTGTCGTTTTCGA
droEug1	scf7180000409030:9958-10208 +		TTCAAATCTGACCCAAACACTCTTGGATTGTCCTATGAAGTTGCGAAACGTAGATTTTTGTCGCTTGAAAGTAGATTGTCAAGAGAGCCTTCGTTAAAGAAAATGTATCTGGATTTCATGGAGGAATACGTATCAATGGGCCACTTGTCCACTTCTGATGATAAAATTCCAGATGGCCCACACTATTTCATTCCGTACCAATGAGTGCTGCGGCCTCAAAGCACCTCAACCAAGTTTAGAGTTGTATTCGA
dm3	chrUextra:4557686-4557909 +		TTTAAGTCTGATCAAAATGGGTTGAGCAACTCCTTCGAAGTTGCAAAAA---------CTTCGCCGGAGCGAAGGTTGTCCCGAGATGCTAAAT-----------------GAGTTAATTTAAGAATATCTCGCAGTAGGTCATATATCGAACACAGAAATCAAAATCCCTTCCAC-CCACATTAAGTTATTCCCCATCAATGCGTGTTAAGGCCCCAGAGTACGTCTACAAAATTGCTTGTCGAGTTCGA
droSim2	node_73632:323-560 -		-------------CAAATGGATTAGGCAACTCCTTCGAGGTTGCAAAACGGCGGTTTTTGTCGCTTGAGCGAAGGTTGTCTCGAGATCCTAACTTGAAGACCATGTACTTGGAATTCATGGAAGAATATCTCGCCCTAGGTCATATGTCGCCTACAGACAACAAAATCCCTTCCACTCCACATTATGTCATTCCCCATCAATGCGTGTTAAGGCCCCAGAGTACGTCAACAAAGTTGCGCGTCGTGTTCGA
droSec2	scaffold_1455:3063-3313 -		CTAAAACTCCATTTGGATTCTTTAGGAGATTCCTATCCTCAGGCTTTGCGGAGATTCTTGTCGCTGGAAAGGAAGCTTACAAAGCACCCTGGCTTGAGGGTTAAATATGCGGCGTTCATGAAGGAGTATCGTGATCTGGGACATATGTCGCCTGTGCCCGCCTCCGAGGTCAGCTCGTGCCGATATTTTTTGCCACATCATTGCGTCATGAAGGAGGATAGCACTACCACCAAGCTTCGCGTTGTCTTTGA
droYak3	v2_chrUn_4989:278566-278816 +		TTTAAATCTGATCCAAATGGATTAGGCAACTCCTTCGAGGTTGCAAAACGGCGGTTTTTGTCGCTTGAGCGAAGGTTGTCTCGAGATCCTAACTTGAAGACAATGTACTTGGAATTCATGGAAGAATATCTCGCCCTAGGTCATATGTCGCCTACAGACAACAAAATCCCTTCCACTCCACATTATGTCATTCCCCATCAATGCGTGTTAAGGCCCCAGAGTACGCCAACAAAGTTGCGCGTCGTGTTCGA
droEre2	scaffold_2151:6155-6405 +		TTTAAGTCCGATCCAAATCTGTTGGTCAACTCCTTCGAGGTTGCAAAACGGCGGTTTTTGTCACTTGAGCGAAAGTTGTCTCAAGATCCTAACATGAAGACCATGTACTTGGAATTCATGGATGAATATCTCGCCCTAGGTCATATGTCAGCTACAGACAACAAAATCTCTTCCACTCCATATTATATCATTCCCCATCAATGCGTGTTAAGGCCCCAGAGTACGTCAACAAAGTTGCCCCTCGTGCTCGA

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droPer2

TTTAAATCAGATCCAAATTGTTTAGGCAACTCCTTTGAGGTTGCGAAACGGCGGTTTTTGTCGCTTGAAAGACGATTGCATCGTGACCCTGAGTTGAAGAAAATGTACTTGGAATTCATGGAAGAGTACCTCTCCTTAGATCATATGTCTCCTACTGACAATACGATTCCTTCTACTCCACACTACGTAATCTCTCATCAGTGTGTTCTGAGGCCCCAAAGTACGTATACCAAGCTCCGAGTCGTGTTCGA	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
......................................................................................................ATGTACTTGGAATTCATGGAAGAGT............................................................................................................................	25	20	3.75	75	0	75	0	0	0	0
......................................................................................................ATGTACTTGGAATTCATGGAAG...............................................................................................................................	22	20	0.55	11	0	11	0	0	0	0
............................................................TCGCTTGAAAGACGATTGCATCGT.......................................................................................................................................................................	24	20	0.40	8	0	8	0	0	0	0
.......................................................................................................................................................................TCCTTCTACTCCACACTACGTAATCTC.........................................................	27	5	0.20	1	0	1	0	0	0	0
.................................................................................................................................................................TACGATTCCTTCTACTCCACACTACG................................................................	26	20	0.20	4	0	4	0	0	0	0
.........................................................................................................................................................................................................TGTGTTCTGAGGCCCCAAAGTACGT.........................	25	20	0.10	2	0	2	0	0	0	0
.......................................................................................................................................................CTACTGACAATACGATTCCTTCTACT..........................................................................	26	20	0.05	1	0	1	0	0	0	0
.................................................................................................................ATTCATGGAAGAGTACCTCTC.....................................................................................................................	21	20	0.05	1	0	0	0	1	0	0
..................................................................................................................................................GTCTCCTACTGACAATACGATTCCTTC..............................................................................	27	20	0.05	1	0	1	0	0	0	0
................................................................................................AAGAAAATGTACTTGGAATTCATGGAA................................................................................................................................	27	20	0.05	1	0	1	0	0	0	0
......................................................................................................ATGTACTTGGAATTCATGGAAGAGTAC..........................................................................................................................	27	20	0.05	1	0	1	0	0	0	0
...................................................................................................................................................................................................................................TACCAAGCTCCGAGTCGTG.....	19	20	0.05	1	0	1	0	0	0	0
...................................................................................................................................................................................................................................TACCAAGCTCCGAGTCGTGA....	20	20	0.05	1	0	1	0	0	0	0
.TTAAATCAGATCCAAATTGTTTAGG.................................................................................................................................................................................................................................	25	20	0.05	1	0	1	0	0	0	0
................................................................................................................................................................ATACGATTCCTTCTACTCCACACTACG................................................................	27	20	0.05	1	0	1	0	0	0	0

dp5

TTTAAATCAGATCCAAATTGTTTAGGCAACTCCTTTGAGGTTGCGAAACGGCGGTTTTTGTCGCTTGAAAGACGATTGCATCGTGACCCTGAGTTGAAGAAAATGTACTTGGAATTCATGGAAGAGTACCTCTCCTTAGGTCATATGTCTTCTACTGACAATACGATTCCTTCTACTCCACACTACGTAATCCCTCATCAGTGTGTTCTGAGGCCCCAAAGTACGTCTACCAAGCTCCGAGTCGTGTTCGA	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
.......................................................................................................................................................................................TACGTAATCCCTCATCAGTGTGTTC...........................................	25	10	48.90	489	0	428	22	3	10	2	18	2	4	0
........................................................................................................GTACTTGGAATTCATGGAAGAGT............................................................................................................................	23	16	24.94	399	0	235	2	0	0	1	5	101	55	0
......TCAGATCCAAATTGTTTAGGCAACTCC..........................................................................................................................................................................................................................	27	5	22.00	110	1	90	11	0	1	0	0	3	4	0
.............................................................................................................................................................................................................................TACGTCTACCAAGCTCCGAGTCGTG.....	25	4	20.25	81	0	77	1	0	2	0	0	1	0	0
......TCAGATCCAAATTGTTTAGGCAACTC...........................................................................................................................................................................................................................	26	7	18.29	128	2	93	26	0	1	0	0	5	1	0
............................................................TCGCTTGAAAGACGATTGCATCGTGA.....................................................................................................................................................................	26	11	18.00	198	0	186	3	0	2	0	0	5	2	0
......TCAGATCCAAATTGTTTAGGCAACT............................................................................................................................................................................................................................	25	7	17.86	125	0	89	23	0	0	0	0	9	4	0
.......................................................................................................................................................................................TACGTAATCCCTCATCAGTGTGT.............................................	23	10	17.60	176	0	149	11	0	2	0	10	2	2	0
........................................................................................................GTACTTGGAATTCATGGAAGAGTA...........................................................................................................................	24	16	16.63	266	0	82	2	0	12	1	85	41	43	0
.............................................................................................................................................................................................................................TACGTCTACCAAGCTCCGAGTCGTGT....	26	4	13.50	54	0	50	1	0	0	0	1	0	2	0
......TCAGATCCAAATTGTTTAGGCAACTCCTT........................................................................................................................................................................................................................	29	5	12.60	63	0	58	5	0	0	0	0	0	0	0
......................................................................................................ATGTACTTGGAATTCATGGAAGAG.............................................................................................................................	24	17	10.82	184	0	158	9	0	0	0	1	13	3	0
.......................................................................................................TGTACTTGGAATTCATGGAAGAGT............................................................................................................................	24	16	9.88	158	0	63	2	0	0	0	4	60	29	0
.......................................................................................................................................................................................TACGTAATCCCTCATCAGTGTGTT............................................	24	10	9.60	96	0	87	1	0	1	0	6	0	1	0
.......................................................................................................TGTACTTGGAATTCATGGAAGAG.............................................................................................................................	23	17	9.06	154	0	71	1	0	0	0	0	62	20	0
............................................................TCGCTTGAAAGACGATTGCATCGTG......................................................................................................................................................................	25	11	8.55	94	0	90	1	0	2	0	1	0	0	0
............................................................TCGCTTGAAAGACGATTGCATCGT.......................................................................................................................................................................	24	11	8.18	90	0	79	0	0	6	0	4	0	1	0
............................................................TCGCTTGAAAGACGATTGCATCG........................................................................................................................................................................	23	11	7.00	77	0	70	0	0	0	0	0	6	1	0
.............................................................................................................................................................................................................................TACGTCTACCAAGCTCCGAGTCGT......	24	5	7.00	35	0	30	1	0	0	0	2	1	1	0
........................................................................................................GTACTTGGAATTCATGGAAGAG.............................................................................................................................	22	17	6.06	103	1	58	0	1	0	0	1	29	13	0
.......................................................................................................TGTACTTGGAATTCATGGAAGAGTA...........................................................................................................................	25	16	5.69	91	0	27	1	0	2	0	11	26	24	0
.............................................................................................................................................................................................................................TACGTCTACCAAGCTCCGAGTCG.......	23	5	5.60	28	0	26	0	0	0	0	0	2	0	0
........................................................................................................GTACTTGGAATTCATGGAAGAGTAC..........................................................................................................................	25	16	5.19	83	0	13	0	0	0	1	2	24	43	0
......TCAGATCCAAATTGTTTAGGCAAC.............................................................................................................................................................................................................................	24	7	5.14	36	0	23	10	0	1	0	1	0	1	0
......TCAGATCCAAATTGTTTAGGCAACTCCT.........................................................................................................................................................................................................................	28	5	5.00	25	0	21	2	0	1	0	0	1	0	0
............................................................TCGCTTGAAAGACGATTGCATC.........................................................................................................................................................................	22	11	4.91	54	0	45	5	0	0	0	0	2	2	0
.......................................................................................................TGTACTTGGAATTCATGGAAGA..............................................................................................................................	22	17	4.88	83	0	44	0	0	0	0	1	23	15	0
.......................................................................................................................................................................................TACGTAATCCCTCATCAGTGTG..............................................	22	10	4.10	41	0	37	1	0	1	0	0	0	2	0
.............................................................................................................................................................................................................................TACGTCTACCAAGCTCCGAG..........	20	5	4.00	20	0	19	0	0	0	0	0	0	1	0
......................................................................................................ATGTACTTGGAATTCATGGAAGA..............................................................................................................................	23	17	3.94	67	0	61	1	0	1	0	0	2	2	0
............................................................TCGCTTGAAAGACGATTGCATCGTGACC...................................................................................................................................................................	28	11	3.73	41	1	33	4	0	0	0	0	0	3	0
.................................................................................................................................................................................................................................TCTACCAAGCTCCGAGTCGTGTTCGA	26	4	3.50	14	0	14	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................TACGTCTACCAAGCTCCGAGT.........	21	5	3.20	16	0	14	1	0	0	0	0	0	1	0
........................................................................................................GTACTTGGAATTCATGGAAGAGTACC.........................................................................................................................	26	16	3.19	51	0	33	7	0	0	0	2	2	7	0
............................................................TCGCTTGAAAGACGATTGCATCGTGACCC..................................................................................................................................................................	29	11	3.18	35	0	34	0	0	0	0	1	0	0	0
........................................................................................................GTACTTGGAATTCATGGAAGA..............................................................................................................................	21	17	3.06	52	0	33	0	0	0	0	1	11	7	0
.......................................................................................................TGTACTTGGAATTCATGGAAGAGTAC..........................................................................................................................	26	16	2.94	47	0	5	0	0	0	0	0	19	23	0
............................................................TCGCTTGAAAGACGATTGCATCGTGAC....................................................................................................................................................................	27	11	2.73	30	0	28	1	0	0	0	0	0	1	0
................................................................................................................................................................................................................TGAGGCCCCAAAGTACGTCTACCAAGC................	27	5	2.60	13	0	10	1	0	0	0	0	1	1	0
.............................................................CGCTTGAAAGACGATTGCATCGTGA.....................................................................................................................................................................	25	11	2.55	28	0	28	0	0	0	0	0	0	0	0
........................................................................................................................................................................................ACGTAATCCCTCATCAGTGTGTTC...........................................	24	10	2.50	25	0	25	0	0	0	0	0	0	0	0
.TTAAATCAGATCCAAATTGTTTAGG.................................................................................................................................................................................................................................	25	7	2.43	17	0	16	0	0	0	0	1	0	0	0
......................................................................................................ATGTACTTGGAATTCATGGAAGAGT............................................................................................................................	25	16	2.38	38	0	35	1	0	1	0	0	0	1	0
........................................................................................................GTACTTGGAATTCATGGAAGAGTACCT........................................................................................................................	27	16	2.13	34	0	17	9	1	0	0	1	6	0	0
........................................................................................................................................TAGGTCATATGTCTTCTACTGACAA..........................................................................................	25	1	2.00	2	0	0	0	0	0	0	0	0	2	0
.............................................................................................................................................................................................................................TACGTCTACCAAGCTCCGAGTC........	22	5	2.00	10	0	10	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................TGTGTTCTGAGGCCCCAAAGTACGTC........................	26	5	2.00	10	0	7	1	0	1	0	0	0	1	0
.......................................................................................................................................................................................TACGTAATCCCTCATCAGTGTGTTCT..........................................	26	10	2.00	20	0	17	1	0	0	0	1	1	0	0
...................................................................................................................................................................................................................................TACCAAGCTCCGAGTCGTGTTCGA	24	4	1.75	7	0	6	0	0	0	0	1	0	0	0
.......CAGATCCAAATTGTTTAGGCAACTC...........................................................................................................................................................................................................................	25	7	1.57	11	0	10	1	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................TCTACCAAGCTCCGAGTCGTG.....	21	4	1.50	6	0	6	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................ACGTCTACCAAGCTCCGAGTCGTG.....	24	4	1.50	6	0	6	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................TACCAAGCTCCGAGTCGTGTTCG.	23	4	1.50	6	0	6	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................TACGTCTACCAAGCTCCGAGTCGTGTT...	27	4	1.50	6	0	5	1	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................AAAGTACGTCTACCAAGCTCCGA...........	23	5	1.40	7	0	1	0	0	0	0	0	6	0	0
.......................................................................................................................................................................................TACGTAATCCCTCATCAGTGT...............................................	21	10	1.40	14	0	11	0	0	1	0	1	0	1	0
.......................................................................................................................................................................................................................CCAAAGTACGTCTACCAAGCTCCGAGT.........	27	5	1.40	7	0	7	0	0	0	0	0	0	0	0
........................................................................................................GTACTTGGAATTCATGGAAGAGTACCTC.......................................................................................................................	28	16	1.38	22	0	20	0	0	0	0	0	0	2	0
.......................................................................................................................................................................................TACGTAATCCCTCATCAGTGTGTTT...........................................	25	10	1.30	13	0	12	0	0	1	0	0	0	0	0
....................................................................................................AAATGTACTTGGAATTCATGGAAGAG.............................................................................................................................	26	17	1.29	22	0	8	0	0	2	0	0	7	5	0
.........................................................................................................TACTTGGAATTCATGGAAGAGTACC.........................................................................................................................	25	16	1.25	20	0	9	0	0	0	0	0	7	4	0
..............................................................................................................................................................................................................................ACGTCTACCAAGCTCCGAGTCGTGT....	25	4	1.25	5	0	5	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................AGTACGTCTACCAAGCTCCGAGTCG.......	25	5	1.20	6	0	6	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................AAAGTACGTCTACCAAGCTCCGAGT.........	25	5	1.20	6	0	5	1	0	0	0	0	0	0	0
.......CAGATCCAAATTGTTTAGGCAACTCC..........................................................................................................................................................................................................................	26	5	1.20	6	0	5	1	0	0	0	0	0	0	0
.........................................................................................................................................................................................................TGTGTTCTGAGGCCCCAAAGTACG..........................	24	5	1.20	6	0	3	1	0	0	0	0	0	2	0
........................................................................................................GTACTTGGAATTCATGGAAG...............................................................................................................................	20	17	1.18	20	0	7	1	0	0	0	0	6	6	0
......................................................................GACGATTGCATCGTGACCCTGAGT.............................................................................................................................................................	24	12	1.17	14	0	13	0	0	0	0	0	0	1	0
.....ATCAGATCCAAATTGTTTAGGCAAC.............................................................................................................................................................................................................................	25	7	1.14	8	0	0	0	0	0	0	0	7	1	0
.TTAAATCAGATCCAAATTGTTTAGGCAAC.............................................................................................................................................................................................................................	29	7	1.14	8	0	7	1	0	0	0	0	0	0	0
.........................................TGCGAAACGGCGGTTTTTGTCGC...........................................................................................................................................................................................	23	7	1.14	8	0	7	1	0	0	0	0	0	0	0
.......CAGATCCAAATTGTTTAGGCAACT............................................................................................................................................................................................................................	24	7	1.14	8	0	8	0	0	0	0	0	0	0	0
......TCAGATCCAAATTGTTTAGGCAA..............................................................................................................................................................................................................................	23	7	1.14	8	0	7	0	0	1	0	0	0	0	0
...................................TGAGGTTGCGAAACGGCGGTTTTTG...............................................................................................................................................................................................	25	9	1.11	10	0	5	0	0	0	0	5	0	0	0
............................................................TCGCTTGAAAGACGATTGCATCGA.......................................................................................................................................................................	24	11	1.09	12	0	11	1	0	0	0	0	0	0	0
......................................................................................................................................................TCTACTGACAATACGATTCCTTCTAC...........................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................CTTAGGTCATATGTCTTCTACTGACA...........................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	1	0	0
.TTAAATCAGATCCAAATTGTTTAGGC................................................................................................................................................................................................................................	26	7	1.00	7	0	7	0	0	0	0	0	0	0	0
.....ATCAGATCCAAATTGTTTAGGCAACTCC..........................................................................................................................................................................................................................	28	5	1.00	5	0	2	0	0	0	0	0	3	0	0
............................................................TCGCTTGAAAGACGATTGCAT..........................................................................................................................................................................	21	11	1.00	11	0	10	0	0	0	0	0	0	1	0
.........................................................................................................................................................................................................TGTGTTCTGAGGCCCCAAAGTAC...........................	23	5	1.00	5	0	1	0	0	0	0	0	0	4	0
.................................................................................................................................................................................................................................TCTACCAAGCTCCGAGTCGTGT....	22	4	1.00	4	0	4	0	0	0	0	0	0	0	0
........................................................................................................................................................TACTGACAATACGATTCCTTCTACTC.........................................................................	26	9	1.00	9	0	9	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................CCAAAGTACGTCTACCAAGCTCCGAG..........	26	5	1.00	5	0	3	0	0	0	0	1	0	1	0
......................................................................................................ATGTACTTGGAATTCATGGAAGAGTA...........................................................................................................................	26	16	0.94	15	0	8	1	0	2	0	4	0	0	0
......................................................................GACGATTGCATCGTGACCCTGA...............................................................................................................................................................	22	13	0.92	12	0	10	0	0	0	0	0	1	1	0
.................................................................................................................................................................TACGATTCCTTCTACTCCACAC....................................................................	22	12	0.92	11	0	11	0	0	0	0	0	0	0	0
............................................................TCGCTTGAAAGACGATTGCATCGTGAA....................................................................................................................................................................	27	11	0.91	10	0	8	1	0	0	0	0	0	1	0
.........................................................................................................TACTTGGAATTCATGGAAGAGT............................................................................................................................	22	16	0.88	14	0	14	0	0	0	0	0	0	0	0
...AAATCAGATCCAAATTGTTTAGG.................................................................................................................................................................................................................................	23	7	0.86	6	0	6	0	0	0	0	0	0	0	0
......TCAGATCCAAATTGTTTAGGCA...............................................................................................................................................................................................................................	22	7	0.86	6	0	6	0	0	0	0	0	0	0	0
.........................................TGCGAAACGGCGGTTTTTGTCGCT..........................................................................................................................................................................................	24	7	0.86	6	0	6	0	0	0	0	0	0	0	0
......................................................................GACGATTGCATCGTGACCCTGAG..............................................................................................................................................................	23	12	0.83	10	0	10	0	0	0	0	0	0	0	0
.............................................................CGCTTGAAAGACGATTGCATCGTG......................................................................................................................................................................	24	11	0.82	9	0	9	0	0	0	0	0	0	0	0
.......................................................................................................TGTACTTGGAATTCATGGAAGAGTACC.........................................................................................................................	27	16	0.81	13	0	5	0	0	0	0	0	5	3	0
.....................................................................................................................................................................................................................CCCCAAAGTACGTCTACCAAGCTC..............	24	5	0.80	4	0	3	1	0	0	0	0	0	0	0
................................................................................................................................................................................................................TGAGGCCCCAAAGTACGTCTACCAAG.................	26	5	0.80	4	0	4	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................TACGTCTACCAAGCTCCGAGA.........	21	5	0.80	4	0	3	1	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................TCTACCAAGCTCCGAGTCGTGTTCG.	25	4	0.75	3	0	3	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................TACCAAGCTCCGAGTCGTGTTC..	22	4	0.75	3	0	3	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................TACGTCTACCAAGCTCCGAGTCGTGTTC..	28	4	0.75	3	0	3	0	0	0	0	0	0	0	0
.............................................................CGCTTGAAAGACGATTGCATCGT.......................................................................................................................................................................	23	11	0.73	8	0	8	0	0	0	0	0	0	0	0
.TTAAATCAGATCCAAATTGTTTAGGCA...............................................................................................................................................................................................................................	27	7	0.71	5	0	5	0	0	0	0	0	0	0	0
.TTAAATCAGATCCAAATTGTTTAGGCAA..............................................................................................................................................................................................................................	28	7	0.71	5	0	4	0	0	0	0	1	0	0	0
......TCAGATCCAAATTGTTTAGGCAACC............................................................................................................................................................................................................................	25	7	0.71	5	0	0	5	0	0	0	0	0	0	0
....................................................................................................AAATGTACTTGGAATTCATGGAAGA..............................................................................................................................	25	17	0.71	12	0	11	1	0	0	0	0	0	0	0
........................................................................................................................................................................................ACGTAATCCCTCATCAGTGTGT.............................................	22	10	0.70	7	0	7	0	0	0	0	0	0	0	0
.............................................................................................................................................................................TACTCCACACTACGTAATCCCTCATCAG..................................................	28	12	0.67	8	0	2	2	0	0	0	0	2	2	0
.......................................................................................................TGTACTTGGAATTCATGGAAG...............................................................................................................................	21	17	0.65	11	0	7	0	0	0	0	0	3	1	0
.............................................................CGCTTGAAAGACGATTGCATCG........................................................................................................................................................................	22	11	0.64	7	0	7	0	0	0	0	0	0	0	0
.........................................................................................................TACTTGGAATTCATGGAAGAGTACCTC.......................................................................................................................	27	16	0.63	10	0	9	1	0	0	0	0	0	0	0
.................................................................TGAAAGACGATTGCATCGTGACCC..................................................................................................................................................................	24	13	0.62	8	0	8	0	0	0	0	0	0	0	0
.......CAGATCCAAATTGTTTAGGCAACTCCTT........................................................................................................................................................................................................................	28	5	0.60	3	0	3	0	0	0	0	0	0	0	0
........................................................................................................................................................................................ACGTAATCCCTCATCAGTGTGTT............................................	23	10	0.60	6	0	6	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................ACGTCTACCAAGCTCCGAG..........	19	5	0.60	3	0	3	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................AGTACGTCTACCAAGCTCCGAGT.........	23	5	0.60	3	0	3	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................AAAGTACGTCTACCAAGCTCCGAG..........	24	5	0.60	3	0	3	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................TACGTAATCCCTCATCAGTG................................................	20	10	0.60	6	0	5	1	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................TACGTCTACCAAGCTCCGA...........	19	5	0.60	3	0	3	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................CAAAGTACGTCTACCAAGCTCCGAGT.........	26	5	0.60	3	0	3	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................TGTGTTCTGAGGCCCCAAAGTACGT.........................	25	5	0.60	3	0	2	0	0	0	0	0	0	1	0
...AAATCAGATCCAAATTGTTTAGGCA...............................................................................................................................................................................................................................	25	7	0.57	4	0	2	0	0	0	0	0	2	0	0
.........................................................................................................TACTTGGAATTCATGGAAGAGTA...........................................................................................................................	23	16	0.56	9	0	9	0	0	0	0	0	0	0	0
...................................TGAGGTTGCGAAACGGCGGTTT..................................................................................................................................................................................................	22	9	0.56	5	0	4	0	0	0	0	1	0	0	0
...................................TGAGGTTGCGAAACGGCGGTT...................................................................................................................................................................................................	21	9	0.56	5	0	5	0	0	0	0	0	0	0	0
...........................................................................................................................................................TGACAATACGATTCCTTCTACTCCACAC....................................................................	28	9	0.56	5	0	5	0	0	0	0	0	0	0	0
............................................................TCGCTTGAAAGACGATTGC............................................................................................................................................................................	19	11	0.55	6	0	5	0	0	1	0	0	0	0	0
...................................................................................................................................................................................................................................TACCAAGCTCCGAGTCGTG.....	19	4	0.50	2	0	2	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................ACGTCTACCAAGCTCCGAGTCGTGTTC..	27	4	0.50	2	0	2	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................CTACCAAGCTCCGAGTCGTGTTCGA	25	4	0.50	2	0	2	0	0	0	0	0	0	0	0
........................................................................................................GTACTTGGAATTCATGGAAGAGTAA..........................................................................................................................	25	16	0.50	8	0	6	0	0	0	0	0	2	0	0
................................................................................................................................................................................................................TGAGGCCCCAAAGTACGTCTACCAA..................	25	8	0.50	4	0	4	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................TACCAAGCTCCGAGTCGTGT....	20	4	0.50	2	0	2	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................TACCAAGCTCCGAGTCGTGTT...	21	4	0.50	2	0	2	0	0	0	0	0	0	0	0
.................................................................................................................................................................TACGATTCCTTCTACTCCACACTACG................................................................	26	12	0.50	6	0	6	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................GTCTACCAAGCTCCGAGTCGTGTTCGA	27	4	0.50	2	0	2	0	0	0	0	0	0	0	0
......................................................................GACGATTGCATCGTGACCCTGAGTTG...........................................................................................................................................................	26	12	0.50	6	0	3	0	0	0	0	0	3	0	0
............................................................................TGCATCGTGACCCTGAGTTGAAGA.......................................................................................................................................................	24	13	0.46	6	0	5	0	0	0	0	0	0	1	0
...........................................................GTCGCTTGAAAGACGATTGCATCGTGA.....................................................................................................................................................................	27	11	0.45	5	0	5	0	0	0	0	0	0	0	0
.........................................TGCGAAACGGCGGTTTTTG...............................................................................................................................................................................................	19	9	0.44	4	0	4	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................TCCCTCATCAGTGTGTTCTGAGGCC....................................	25	9	0.44	4	0	3	1	0	0	0	0	0	0	0
...AAATCAGATCCAAATTGTTTAGGC................................................................................................................................................................................................................................	24	7	0.43	3	0	1	0	0	0	0	0	2	0	0
............................ACTCCTTTGAGGTTGCGAAACGG........................................................................................................................................................................................................	23	7	0.43	3	0	3	0	0	0	0	0	0	0	0
.........................................TGCGAAACGGCGGTTTTTGTCGCTT.........................................................................................................................................................................................	25	7	0.43	3	0	3	0	0	0	0	0	0	0	0
..TAAATCAGATCCAAATTGTTTAGGCA...............................................................................................................................................................................................................................	26	7	0.43	3	0	3	0	0	0	0	0	0	0	0
...AAATCAGATCCAAATTGTTTAGGCAAC.............................................................................................................................................................................................................................	27	7	0.43	3	0	0	0	0	0	0	0	2	1	0
.....ATCAGATCCAAATTGTTTAGGCAACTC...........................................................................................................................................................................................................................	27	7	0.43	3	0	3	0	0	0	0	0	0	0	0
....AATCAGATCCAAATTGTTTAGGCAAC.............................................................................................................................................................................................................................	26	7	0.43	3	0	1	0	0	0	0	0	2	0	0
.....................................................................AGACGATTGCATCGTGACCCTGAGT.............................................................................................................................................................	25	12	0.42	5	0	2	0	0	0	0	0	1	2	0
........................................................................................................GTACTTGGAATTCATGGAA................................................................................................................................	19	17	0.41	7	0	6	0	0	0	0	0	0	1	0
......................................................................................................ATGTACTTGGAATTCATGGAA................................................................................................................................	21	17	0.41	7	0	7	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................TACGTCTACCAAGCTCCGAGTCC.......	23	5	0.40	2	0	0	0	0	0	0	0	0	2	0
........................................................................................................................................................................................................................CAAAGTACGTCTACCAAGCTCCGA...........	24	5	0.40	2	0	1	0	0	0	0	0	1	0	0
......TCAGATCCAAATTGTTTAGGCAACTCCC.........................................................................................................................................................................................................................	28	5	0.40	2	0	0	1	0	0	0	0	0	1	0
.............................................................................................................................................................................................................................TACGTCTACCAAGCTCC.............	17	5	0.40	2	0	0	0	0	0	0	0	1	1	0
.......CAGATCCAAATTGTTTAGGCAACTCCT.........................................................................................................................................................................................................................	27	5	0.40	2	0	2	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................GTACGTCTACCAAGCTCCGAGTCG.......	24	5	0.40	2	0	2	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................TACGTAATCCCTCATCAGTGTGTTCTG.........................................	27	10	0.40	4	0	4	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................TACGTAATCCCTCATCAGTGTGTTCA..........................................	26	10	0.40	4	0	4	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................CCCCAAAGTACGTCTACCAAGCTCCGAG..........	28	5	0.40	2	0	2	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................TACGTAATCCCTCATCAGTGTGC.............................................	23	10	0.40	4	0	0	3	1	0	0	0	0	0	0
...........................................................................................................................................................................................................................AGTACGTCTACCAAGCTCCGAGTC........	24	5	0.40	2	0	2	0	0	0	0	0	0	0	0
............................................................................TGCATCGTGACCCTGAGTTGAAG........................................................................................................................................................	23	13	0.38	5	0	4	0	0	0	0	1	0	0	0
......................................................................GACGATTGCATCGTGACCCTG................................................................................................................................................................	21	13	0.38	5	0	5	0	0	0	0	0	0	0	0
......TCAGATCCAAATTGTTTAGGCAACTA...........................................................................................................................................................................................................................	26	8	0.38	3	0	3	0	0	0	0	0	0	0	0
.........................................................................................................TACTTGGAATTCATGGAAGAGTACCT........................................................................................................................	26	16	0.38	6	0	4	1	0	0	0	0	0	1	0
............................................................TCGCTTGAAAGACGATTGCA...........................................................................................................................................................................	20	11	0.36	4	0	4	0	0	0	0	0	0	0	0
............................................................TCGCTTGAAAGACGATTGCATCGTGAAA...................................................................................................................................................................	28	11	0.36	4	0	4	0	0	0	0	0	0	0	0
....................................................................................................AAATGTACTTGGAATTCATGGAAG...............................................................................................................................	24	17	0.35	6	0	4	0	0	0	0	0	0	2	0
.............................................................................................................................................................................................................................TACGTCTACCAAGCTCCGAGTA........	22	6	0.33	2	0	2	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................AGTGTGTTCTGAGGCCCCAAAG..............................	22	6	0.33	2	0	2	0	0	0	0	0	0	0	0
.................................................................................................................................................................TACGATTCCTTCTACTCCACACT...................................................................	23	12	0.33	4	0	3	1	0	0	0	0	0	0	0
.................................TTTGAGGTTGCGAAACGGCG......................................................................................................................................................................................................	20	9	0.33	3	0	0	0	0	0	0	0	2	1	0
..............................................................................................................................................................................................TCCCTCATCAGTGTGTTCTGAGGCCCC..................................	27	9	0.33	3	0	3	0	0	0	0	0	0	0	0
.................................TTTGAGGTTGCGAAACGGCGG.....................................................................................................................................................................................................	21	9	0.33	3	0	3	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................TCAGTGTGTTCTGAGGCCCCAAAG..............................	24	6	0.33	2	0	2	0	0	0	0	0	0	0	0
...................................TGAGGTTGCGAAACGGCGGT....................................................................................................................................................................................................	20	9	0.33	3	0	3	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................TCATCAGTGTGTTCTGAGGCCCCAAAG..............................	27	6	0.33	2	0	2	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................TCCCTCATCAGTGTGTTCTGAGGCCC...................................	26	9	0.33	3	0	3	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................TCCCTCATCAGTGTGTTCTGAGGCCCCA.................................	28	6	0.33	2	0	2	0	0	0	0	0	0	0	0
.........................................TGCGAAACGGCGGTTTTTGTC.............................................................................................................................................................................................	21	9	0.33	3	0	3	0	0	0	0	0	0	0	0
.........................................................................................................TACTTGGAATTCATGGAAGAGTAC..........................................................................................................................	24	16	0.31	5	0	2	0	0	0	0	0	2	1	0
.......................................................................................................TGTACTTGGAATTCATGGAAGAGTACA.........................................................................................................................	27	16	0.31	5	0	0	0	0	0	0	0	5	0	0
.................................................................TGAAAGACGATTGCATCGTGACC...................................................................................................................................................................	23	13	0.31	4	0	4	0	0	0	0	0	0	0	0
................................................................TTGAAAGACGATTGCATCGTGACCC..................................................................................................................................................................	25	13	0.31	4	0	4	0	0	0	0	0	0	0	0
...........................................................................TTGCATCGTGACCCTGAGTTG...........................................................................................................................................................	21	13	0.31	4	0	2	0	0	0	0	0	0	2	0
............................................................................TGCATCGTGACCCTGAGTTGAAGAAA.....................................................................................................................................................	26	13	0.31	4	0	3	0	0	0	0	0	0	1	0
.....................................................................................................AATGTACTTGGAATTCATGGAAGAG.............................................................................................................................	25	17	0.29	5	0	2	0	0	0	0	0	2	1	0
......................................................................................................ATGTACTTGGAATTCATGGA.................................................................................................................................	20	17	0.29	5	0	5	0	0	0	0	0	0	0	0
............................ACTCCTTTGAGGTTGCGAAACGGC.......................................................................................................................................................................................................	24	7	0.29	2	0	1	0	0	0	0	0	1	0	0
....AATCAGATCCAAATTGTTTAGGCA...............................................................................................................................................................................................................................	24	7	0.29	2	0	2	0	0	0	0	0	0	0	0
....AATCAGATCCAAATTGTTTAGGCAACTC...........................................................................................................................................................................................................................	28	7	0.29	2	0	2	0	0	0	0	0	0	0	0
....AATCAGATCCAAATTGTTTAGG.................................................................................................................................................................................................................................	22	7	0.29	2	0	2	0	0	0	0	0	0	0	0
.....ATCAGATCCAAATTGTTTAGGC................................................................................................................................................................................................................................	22	7	0.29	2	0	2	0	0	0	0	0	0	0	0
....AATCAGATCCAAATTGTTTAGGC................................................................................................................................................................................................................................	23	7	0.29	2	0	2	0	0	0	0	0	0	0	0
.....ATCAGATCCAAATTGTTTAGGCAACT............................................................................................................................................................................................................................	26	7	0.29	2	0	2	0	0	0	0	0	0	0	0
...AAATCAGATCCAAATTGTTTAGGA................................................................................................................................................................................................................................	24	7	0.29	2	0	2	0	0	0	0	0	0	0	0
......TCAGATCCAAATTGTTTAGGCAACTCA..........................................................................................................................................................................................................................	27	7	0.29	2	0	2	0	0	0	0	0	0	0	0
..............................TCCTTTGAGGTTGCGAAACGGCG......................................................................................................................................................................................................	23	7	0.29	2	0	2	0	0	0	0	0	0	0	0
.TTAAATCAGATCCAAATTGT......................................................................................................................................................................................................................................	20	7	0.29	2	0	1	0	0	0	0	1	0	0	0
......TCAGATCCAAATTGTTTAGGC................................................................................................................................................................................................................................	21	7	0.29	2	0	1	0	0	0	0	0	1	0	0
.TTAAATCAGATCCAAATTGTTT....................................................................................................................................................................................................................................	22	7	0.29	2	0	0	0	0	0	0	2	0	0	0
.................TTGTTTAGGCAACTCCTTTGAGGT..................................................................................................................................................................................................................	24	7	0.29	2	0	2	0	0	0	0	0	0	0	0
.......................................................................................................................................................CTACTGACAATACGATTCCTTCTAC...........................................................................	25	11	0.27	3	0	2	1	0	0	0	0	0	0	0
.............................................................CGCTTGAAAGACGATTGCATCGTGACCC..................................................................................................................................................................	28	11	0.27	3	0	3	0	0	0	0	0	0	0	0
...........................................................GTCGCTTGAAAGACGATTGCATCG........................................................................................................................................................................	24	11	0.27	3	0	3	0	0	0	0	0	0	0	0
..............................................................GCTTGAAAGACGATTGCATCGTGA.....................................................................................................................................................................	24	11	0.27	3	0	2	0	0	0	0	1	0	0	0
........................................................................................................................................................TACTGACAATACGATTCCTTCTAC...........................................................................	24	11	0.27	3	0	3	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................TACGTCTACCAAGCTCCGAGTCGTGA....	26	4	0.25	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................ACGTCTACCAAGCTCCGAGTCGTGTT...	26	4	0.25	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................TGAGGCCCCAAAGTACGTCTAC.....................	22	8	0.25	2	0	2	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................CCAAGCTCCGAGTCGTGTTCG.	21	4	0.25	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................CTACCAAGCTCCGAGTCGTGT....	21	4	0.25	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................GTACGTCTACCAAGCTCCGAGTCGTG.....	26	4	0.25	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................TACGATTCCTTCTACTCCACACTAC.................................................................	25	12	0.25	3	0	3	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................AGTACGTCTACCAAGCTCCGAGTCGTG.....	27	4	0.25	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................TACGATTCCTTCTACTCCACA.....................................................................	21	12	0.25	3	0	3	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................TACGTCTACCAAGCTCCGAGTCGTGTC...	27	4	0.25	1	0	0	0	0	0	0	0	0	1	0
.............................................................................................................................................................................TACTCCACACTACGTAATCCCTCATC....................................................	26	12	0.25	3	0	2	1	0	0	0	0	0	0	0
....................................................................AAGACGATTGCATCGTGACCCTGAGT.............................................................................................................................................................	26	12	0.25	3	0	1	0	0	0	0	0	0	2	0
.......................................................................................................TGTACTTGGAATTCATGGA.................................................................................................................................	19	17	0.24	4	0	3	0	0	0	0	0	0	1	0
......................................................................................................ATGTACTTGGAATTCATGGAAG...............................................................................................................................	22	17	0.24	4	0	4	0	0	0	0	0	0	0	0
.........................................................................................................TACTTGGAATTCATGGAAGAG.............................................................................................................................	21	17	0.24	4	0	4	0	0	0	0	0	0	0	0
.........................................................................................................TACTTGGAATTCATGGAAGA..............................................................................................................................	20	17	0.24	4	0	3	0	0	0	0	0	1	0	0
....................................................................................................AAATGTACTTGGAATTCATGGA.................................................................................................................................	22	17	0.24	4	0	0	0	0	0	0	0	1	3	0
....................................................................................................AAATGTACTTGGAATTCATGGAA................................................................................................................................	23	17	0.24	4	0	1	0	0	0	0	0	2	1	0
...........................................................................TTGCATCGTGACCCTGAGTTGAAGA.......................................................................................................................................................	25	13	0.23	3	0	0	0	0	0	0	0	0	3	0
............................................................................TGCATCGTGACCCTGAGTTG...........................................................................................................................................................	20	13	0.23	3	0	3	0	0	0	0	0	0	0	0
...................................TGAGGTTGCGAAACGGCGG.....................................................................................................................................................................................................	19	9	0.22	2	0	2	0	0	0	0	0	0	0	0
...........................................................................................................................................................TGACAATACGATTCCTTCTACTCCAC......................................................................	26	9	0.22	2	0	2	0	0	0	0	0	0	0	0
.......................................................................................................................................................CTACTGACAATACGATTCCTTCTACTC.........................................................................	27	9	0.22	2	0	2	0	0	0	0	0	0	0	0
.................................TTTGAGGTTGCGAAACGGCGGTTT..................................................................................................................................................................................................	24	9	0.22	2	0	1	0	0	0	0	1	0	0	0
...................................TGAGGTTGCGAAACGGCGA.....................................................................................................................................................................................................	19	9	0.22	2	0	2	0	0	0	0	0	0	0	0
......................................................................................................................................................................TTCCTTCTACTCCACACTACGTAAT............................................................	25	14	0.21	3	0	3	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................AAGTACGTCTACCAAGCTCCGAGT.........	24	5	0.20	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................TCTACCAAGCTCCGAGTCGTT.....	21	5	0.20	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................TAATCCCTCATCAGTGTGTTCTGAGA......................................	26	10	0.20	2	0	2	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................GTCTACCAAGCTCCGAGTCG.......	20	5	0.20	1	0	1	0	0	0	0	0	0	0	0

droWil2

TTTAAGTTGAGCCCCGATGCACTTGGGCTTTCATTTGAAGTTGCTAAACGGCGGTTTTTGTCGCTCGAAAGAAGATTGTCGAAAGATGTGGAATTAAGAAACATGTATCTAGAATTTATGGAAGAATATCTTTCATTGGGACACATGTCAAAAACCGATAATAAAATTGCCACTCATCCACACTATTTCATTCCACATCAGGTAGTTTTAAGACCTCAAAGCACGTCGACGAAACTTCGTGTTGTATTCGA	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
.....................................................GTTTTTGTCGCTCGAAAGAAGATTGT............................................................................................................................................................................	26	10	0.10	1	0	1	0	0	0

droVir3

TTTAAATCAGATCCCAGCTTA---G--TACTCCTTCGAGGTTGCTAAGCGTCGTTTTATGTCGCTTGAAAGACGCTTCTGCCGAGATCCCCAGCTTAAGCGCATGTACTTGGAGTTCATGGAGGAATATTTAACTTTAGGTACCATGTTTGAAAGAGATGATCAGATTCCAAGTATTTCACACTACTTCATTCCGCACCAGTGTGTTTTAAGACCACAAAGCACATCGACAAAGTTACGCGTTGTTTTTGA

Size

Hit Count

Total Norm

Total

M027
Male-body

M028
Head

M047
Female-body

M061
Embryo

SRR060654
Ovary

SRR060655
Testis

SRR060656
Ovary

SRR060657
Testis

SRR060658
Ovary

SRR060659
Testis

SRR060660
Ovary

SRR060661
Embryo

SRR060662
Embryo

SRR060663
Embryo

SRR060664
Male-body

SRR060665
Female-body

SRR060666
Male-body

SRR060667
Female-body

SRR060668
Male-body

SRR060669
Female-body

SRR060670
Testis

SRR060671
Male-body

SRR060672
Female-body

SRR060673
Ovary

SRR060674
Ovary

SRR060675
Ovary

SRR060676
Ovary

SRR060677
Ovary

SRR060678
Testis

SRR060679
Testis

SRR060680
Testis

SRR060681
Testis

SRR060682
Embryo

SRR060683
Testis

SRR060684
Embryo

SRR060685
Embryo

SRR060686
Embryo

SRR060687
Embryo

SRR060688
Ovary

SRR060689
Testis

SRR1106712
embryo_0-2h

SRR1106713
embryo_0-2h

SRR1106714
embryo_2-4h

SRR1106715
embryo_4-6h

SRR1106716
embryo_4-6h

SRR1106717
embryo_6-8h

SRR1106718
embryo_6-8h

SRR1106719
embryo_8-10h

SRR1106720
embryo_8-10h

SRR1106721
embryo_10-12h

SRR1106722
embryo_10-12h

SRR1106723
embryo_12-14h

SRR1106724
embryo_12-14h

SRR1106725
embryo_14-16h

SRR1106726
embryo_14-16h

SRR1106727
larvae

SRR1106728
larvae

SRR1106729
mixed whole adult body

SRR1106730
embryo_16-30h

V047
Embryo

V053
Head

V116
Male-body

GSM1528803
follicle cells

No Reads

droMoj3

TTCAAATCAAGCCCACATTGTCTTGGTACGTCTTATGACACAGCCAAGCGACGATTTCTGGCCTTGGAAAGAAGAATGAGCAAGCAAGAAGACATTCGGCGAATGTACATTGACTTTATGAAAGAATACTTGGCCTTGGGTCACATGAGCCCAACTAACAATCAAATTCCGAGAGAGCCGCATTATTTCATCCCATATCAATGCGTGCTAAGACCGCACAGTGGAT--ACTAAACTTCGAGTAGTGTTTGA	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
..........GCCCACATTGTCTTGGTACGTCT..........................................................................................................................................................................................................................	23	20	9.10	182	0	6	0	0	176	0
............................................................................................................ATTGACTTTATGAAAGAATACTTGGCC....................................................................................................................	27	20	3.75	75	0	0	0	0	75	0
................................................................................CAAGCAAGAAGACATTCGGCGAATGT.................................................................................................................................................	26	1	3.00	3	1	0	0	0	1	1
..........GCCCACATTGTCTTGGTACGTC...........................................................................................................................................................................................................................	22	20	2.25	45	39	6	0	0	0	0
................................................................................CAAGCAAGAAGACATTCGGCGAATG..................................................................................................................................................	25	1	2.00	2	2	0	0	0	0	0
................................................................................CAAGCAAGAAGACATTCGGCGAAT...................................................................................................................................................	24	1	2.00	2	2	0	0	0	0	0
............................................................................................................ATTGACTTTATGAAAGAATACTTG.......................................................................................................................	24	20	1.20	24	24	0	0	0	0	0
................................................................................CAAGCAAGAAGACATTCGGCGAATGTAA...............................................................................................................................................	28	1	1.00	1	0	0	0	0	0	1
..........GCCCACATTGTCTTGGTACGTCTTATGA.....................................................................................................................................................................................................................	28	16	1.00	16	15	0	0	0	1	0
................................................................................CAAGCAAGAAGACATTCGGCGAA....................................................................................................................................................	23	1	1.00	1	0	0	0	0	1	0
..............................................................................................TTCGGCGAATGTACATTGACTT.......................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0
................................................................................CAAGCAAGAAGACATTCGGCGA.....................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0
.............................................................................................................TTGACTTTATGAAAGAATACTTGGCC....................................................................................................................	26	20	0.90	18	7	0	0	0	11	0
............................................................................................................ATTGACTTTATGAAAGAATACTTGG......................................................................................................................	25	20	0.90	18	18	0	0	0	0	0
...............................................................................................................GACTTTATGAAAGAATACTTGGCCTT..................................................................................................................	26	20	0.70	14	11	0	0	0	3	0
...............................................................................................................GACTTTATGAAAGAATACTTGGCCT...................................................................................................................	25	20	0.70	14	0	0	0	0	14	0
.............................................................................................................................................................................................................................TGGAT--ACTAAACTTCGAGTAGTGT....	24	3	0.67	2	1	1	0	0	0	0
...................................TGACACAGCCAAGCGACGATTTCTGGC.............................................................................................................................................................................................	27	5	0.60	3	2	0	0	0	1	0
........................................CAGCCAAGCGACGATTTCTGG..............................................................................................................................................................................................	21	20	0.60	12	12	0	0	0	0	0
............................................CAAGCGACGATTTCTGGCCTTG.........................................................................................................................................................................................	22	20	0.45	9	9	0	0	0	0	0
..........GCCCACATTGTCTTGGTACGTCTTAT.......................................................................................................................................................................................................................	26	17	0.41	7	7	0	0	0	0	0
...................................TGACACAGCCAAGCGACGATTTCTG...............................................................................................................................................................................................	25	5	0.40	2	1	1	0	0	0	0
............................................CAAGCGACGATTTCTGGCCTTGGA.......................................................................................................................................................................................	24	20	0.40	8	8	0	0	0	0	0
....................................................................................................................TATGAAAGAATACTTGGCCTT..................................................................................................................	21	20	0.35	7	6	0	1	0	0	0
...............................................................................................................GACTTTATGAAAGAATACTTGGC.....................................................................................................................	23	20	0.35	7	7	0	0	0	0	0
................................................................................................................ACTTTATGAAAGAATACTTGG......................................................................................................................	21	20	0.35	7	6	0	1	0	0	0
...........................................................................................................................................................................................................................AGTGGAT--ACTAAACTTCGAG..........	20	3	0.33	1	1	0	0	0	0	0
..............................................................................................................................................................................................................GCTAAGACCGCACAGTGGAT--ACTAAAC................	27	3	0.33	1	0	0	0	0	1	0
.............................................................................................................................................................................................................................TGGAT--ACTAAACTTCGAGTAGTGTTTG.	27	3	0.33	1	1	0	0	0	0	0
.................................................................................................................................................................................................................................T--ACTAAACTTCGAGTAGTGTTTGA	24	3	0.33	1	1	0	0	0	0	0
.............................................................................................................................................................................................................................TGGAT--ACTAAACTTCGAGTAGTGTT...	25	3	0.33	1	1	0	0	0	0	0
............................................................................................................................................................................................................................GTGGAT--ACTAAACTTCGAGTAGTGT....	25	3	0.33	1	0	0	0	0	0	1
..........GCCCACATTGTCTTGGTACGTCTTATG......................................................................................................................................................................................................................	27	16	0.31	5	5	0	0	0	0	0
..................................................................................................................................................................................................ATATCAATGCGTGCTAAGACC....................................	21	20	0.30	6	2	0	0	0	4	0
.................................TATGACACAGCCAAGCGACGATT...................................................................................................................................................................................................	23	7	0.29	2	2	0	0	0	0	0
.........................................................................................................................................................................................TTTCATCCCATATCAATGCGTGCT..........................................	24	20	0.25	5	5	0	0	0	0	0
........AAGCCCACATTGTCTTGGTAC..............................................................................................................................................................................................................................	21	20	0.25	5	0	0	0	0	5	0
..........................................................................................................................AGAATACTTGGCCTTGGGTCA............................................................................................................	21	20	0.25	5	5	0	0	0	0	0
...AAATCAAGCCCACATTGTCTT...................................................................................................................................................................................................................................	21	20	0.25	5	5	0	0	0	0	0
..................................................................................................................TTTATGAAAGAATACTTGGCC....................................................................................................................	21	20	0.20	4	4	0	0	0	0	0
...................................................................................................................................................................................................TATCAATGCGTGCTAAGACCG...................................	21	20	0.20	4	0	0	0	0	0	4
............................................CAAGCGACGATTTCTGGCCTT..........................................................................................................................................................................................	21	20	0.20	4	4	0	0	0	0	0
.........................................................................................................................AAGAATACTTGGCCTTGGGTC.............................................................................................................	21	20	0.20	4	3	0	0	0	1	0
.................................TATGACACAGCCAAGCGACGATTTCT................................................................................................................................................................................................	26	5	0.20	1	0	0	0	0	0	1
.................................TATGACACAGCCAAGCGACGATTTC.................................................................................................................................................................................................	25	5	0.20	1	0	0	0	0	1	0
......................................CACAGCCAAGCGACGATTTCTGGCCT...........................................................................................................................................................................................	26	20	0.15	3	3	0	0	0	0	0
.TCAAATCAAGCCCACATTGTCTTG..................................................................................................................................................................................................................................	24	20	0.15	3	3	0	0	0	0	0
..........................................................................................................................................................................................TTCATCCCATATCAATGCGTGCT..........................................	23	20	0.15	3	3	0	0	0	0	0
.........................................................................................................................................................ACTAACAATCAAATTCCGAGA.............................................................................	21	20	0.15	3	3	0	0	0	0	0
..............................................................................................................TGACTTTATGAAAGAATACTTGGC.....................................................................................................................	24	20	0.15	3	3	0	0	0	0	0
...............................................................................................................GACTTTATGAAAGAATACTTGGCCTTG.................................................................................................................	27	20	0.15	3	3	0	0	0	0	0
.........................................................................................................................................................................................TTTCATCCCATATCAATGCGT.............................................	21	20	0.15	3	2	0	0	1	0	0
.........................................................CTGGCCTTGGAAAGAAGAA...............................................................................................................................................................................	19	20	0.15	3	1	0	0	2	0	0
.................................TATGACACAGCCAAGCGACGA.....................................................................................................................................................................................................	21	7	0.14	1	1	0	0	0	0	0
...........CCCACATTGTCTTGGTACGTCTTATGA.....................................................................................................................................................................................................................	27	16	0.13	2	2	0	0	0	0	0
............................................CAAGCGACGATTTCTGGCCTTGG........................................................................................................................................................................................	23	20	0.10	2	0	0	0	0	2	0
...............................................GCGACGATTTCTGGCCTTGGA.......................................................................................................................................................................................	21	20	0.10	2	0	0	0	0	2	0
.................................................................................................................CTTTATGAAAGAATACTTGGCC....................................................................................................................	22	20	0.10	2	1	0	0	0	1	0
...................................................................................................................................................................AAATTCCGAGAGAGCCGCATT...................................................................	21	20	0.10	2	0	0	0	1	1	0
..........GCCCACATTGTCTTGGTACGTCTC.........................................................................................................................................................................................................................	24	20	0.10	2	0	0	0	0	0	2
...............................................................................................................GACTTTATGAAAGAATACTTGGCCTC..................................................................................................................	26	20	0.10	2	2	0	0	0	0	0
..................................................................................................................................................................CAAATTCCGAGAGAGCCGCAT....................................................................	21	20	0.10	2	2	0	0	0	0	0
..........GCCCACATTGTCTTGGTACGTCTT.........................................................................................................................................................................................................................	24	20	0.10	2	0	0	0	0	2	0
.............................................................................................................TTGACTTTATGAAAGAATACTTGGCCC...................................................................................................................	27	20	0.10	2	0	0	0	0	2	0
.................................................GACGATTTCTGGCCTTGGAAAGA...................................................................................................................................................................................	23	20	0.10	2	2	0	0	0	0	0
.................................................................................AAGCAAGAAGACATTCGGC.......................................................................................................................................................	19	20	0.10	2	2	0	0	0	0	0
.............................................................................................................................................................................................ATCCCATATCAATGCGTGCTAAGACC....................................	26	20	0.10	2	0	0	0	0	2	0
................................................................................................................ACTTTATGAAAGAATACTTGGCCTT..................................................................................................................	25	20	0.10	2	2	0	0	0	0	0
...........................................................................................................................................................TAACAATCAAATTCCGAGAGAGC.........................................................................	23	20	0.10	2	2	0	0	0	0	0
..............................................................................................................TGACTTTATGAAAGAATACTTGGCCT...................................................................................................................	26	20	0.10	2	1	0	0	0	0	1
....................................................................................................................TATGAAAGAATACTTGGCCTTGGGT..............................................................................................................	25	20	0.10	2	0	0	0	0	2	0
............................................CAAGCGACGATTTCTGGCCTTGGAAAG....................................................................................................................................................................................	27	20	0.10	2	2	0	0	0	0	0
.....................................................ATTTCTGGCCTTGGAAAGAAGAATG.............................................................................................................................................................................	25	20	0.10	2	2	0	0	0	0	0
............................................................................................................ATTGACTTTATGAAAGAATACTTGGCCT...................................................................................................................	28	20	0.10	2	2	0	0	0	0	0
......TCAAGCCCACATTGTCTTGGTACGTCT..........................................................................................................................................................................................................................	27	20	0.10	2	2	0	0	0	0	0
...................................................................................................................TTATGAAAGAATACTTGGCCT...................................................................................................................	21	20	0.10	2	2	0	0	0	0	0
..........GCCCACATTGTCTTGGTACGT............................................................................................................................................................................................................................	21	20	0.10	2	0	0	0	0	0	2
...............................................................................................................................................................................................CCCATATCAATGCGTGCTAAGAC.....................................	23	20	0.10	2	0	0	0	0	0	2
.................................................................................................................................TTGGCCTTGGGTCACATGAG......................................................................................................	20	20	0.10	2	0	0	0	2	0	0
.......................................................TTCTGGCCTTGGAAAGAAGAA...............................................................................................................................................................................	21	20	0.10	2	2	0	0	0	0	0
...........CCCACATTGTCTTGGTACGTCTTA........................................................................................................................................................................................................................	24	20	0.10	2	2	0	0	0	0	0
.............................................................................................................................................................ACAATCAAATTCCGAGAGAGC.........................................................................	21	20	0.10	2	2	0	0	0	0	0
..................................................................GAAAGAAGAATGAGCAAG.......................................................................................................................................................................	18	20	0.10	2	0	0	1	0	0	1
....................................................GATTTCTGGCCTTGGAAAGAAGA................................................................................................................................................................................	23	20	0.10	2	2	0	0	0	0	0
.................TTGTCTTGGTACGTCTTATGACACAGCCA.............................................................................................................................................................................................................	29	12	0.08	1	1	0	0	0	0	0
..........GCCCACATTGTCTTGGTACGTCTTATGAC....................................................................................................................................................................................................................	29	12	0.08	1	1	0	0	0	0	0
.................TTGTCTTGGTACGTCTTATGACACAGC...............................................................................................................................................................................................................	27	13	0.08	1	0	0	0	0	1	0
............CCACATTGTCTTGGTACGTCTTATGA.....................................................................................................................................................................................................................	26	16	0.06	1	1	0	0	0	0	0
...........CCCACATTGTCTTGGTACGTCTTATG......................................................................................................................................................................................................................	26	16	0.06	1	1	0	0	0	0	0
............CCACATTGTCTTGGTACGTCTTATG......................................................................................................................................................................................................................	25	16	0.06	1	0	0	0	0	1	0
..CAAATCAAGCCCACATTGTCTC...................................................................................................................................................................................................................................	22	20	0.05	1	1	0	0	0	0	0
...........................................................................................................................GAATACTTGGCCTTGGGTC.............................................................................................................	19	20	0.05	1	1	0	0	0	0	0
..................................................................................................................................................................CAAATTCCGAGAGAGCCGCATTATT................................................................	25	20	0.05	1	1	0	0	0	0	0
..............................................................................................................................................................................GAGCCGCATTATTTCATCCC.........................................................	20	20	0.05	1	1	0	0	0	0	0
........................................CAGCCAAGCGACGATTTC.................................................................................................................................................................................................	18	20	0.05	1	0	0	1	0	0	0
...............................................................................................................................................................AATCAAATTCCGAGAGAGCCGA......................................................................	22	20	0.05	1	0	0	0	1	0	0
........................................CAGCCAAGCGACGATTTCTGGCC............................................................................................................................................................................................	23	20	0.05	1	0	0	0	0	1	0
.........AGCCCACATTGTCTTGGTACGTC...........................................................................................................................................................................................................................	23	20	0.05	1	1	0	0	0	0	0
.........AGCCCACATTGTCTTGGTACGT............................................................................................................................................................................................................................	22	20	0.05	1	1	0	0	0	0	0
.......CAAGCCCACATTGTCTTGGTC...............................................................................................................................................................................................................................	21	20	0.05	1	1	0	0	0	0	0
...........................................................................................................................................GTCACATGAGCCCAACTAACAATCAAA.....................................................................................	27	20	0.05	1	1	0	0	0	0	0
...................................................................................................................TTATGAAAGAATACTTGGCCTTGGGTCA............................................................................................................	28	20	0.05	1	1	0	0	0	0	0
................................................CGACGATTTCTGGCCTTGGAA......................................................................................................................................................................................	21	20	0.05	1	0	0	1	0	0	0
............................................................................................................................................................AACAATCAAATTCCGAGAGAGC.........................................................................	22	20	0.05	1	0	0	0	0	0	1
..........................................GCCAAGCGACGATTTCTGGCCTTGGA.......................................................................................................................................................................................	26	20	0.05	1	1	0	0	0	0	0
............................................................................................................................AATACTTGGCCTTGGGTCACATGAGCCCA..................................................................................................	29	20	0.05	1	0	0	0	0	1	0
.......................................................................................................................GAAAGAATACTTGGCCTTGGGTCAC...........................................................................................................	25	20	0.05	1	0	0	0	0	1	0
.................................................................................................................................................................................................CATATCAATGCGTGCTAAGACC....................................	22	20	0.05	1	1	0	0	0	0	0
.......................................ACAGCCAAGCGACGATTTCT................................................................................................................................................................................................	20	20	0.05	1	1	0	0	0	0	0
TTCAAATCAAGCCCACATTGTC.....................................................................................................................................................................................................................................	22	20	0.05	1	1	0	0	0	0	0
.............................................................................................................TTGACTTTATGAAAGAATACTTGGCCTC..................................................................................................................	28	20	0.05	1	1	0	0	0	0	0
................................................................................................................ACTTTATGAAAGAATACTTGGC.....................................................................................................................	22	20	0.05	1	0	0	0	0	1	0
............................................................................TGAGCAAGCAAGAAGACATTC..........................................................................................................................................................	21	20	0.05	1	1	0	0	0	0	0
..............................................................................................................TGACTTTATGAAAGAATACTTG.......................................................................................................................	22	20	0.05	1	1	0	0	0	0	0
.......................................ACAGCCAAGCGACGATTTCTGGC.............................................................................................................................................................................................	23	20	0.05	1	1	0	0	0	0	0
.................................................................................................................................................................TCAAATTCCGAGAGAGCCGCA.....................................................................	21	20	0.05	1	0	0	0	0	1	0
............................................CAAGCGACGATTTCTGGCCT...........................................................................................................................................................................................	20	20	0.05	1	1	0	0	0	0	0
.................................................................................................................................................................TCAAATTCCGAGAGAGCCGCATTATT................................................................	26	20	0.05	1	0	0	0	0	0	1
......................................CACAGCCAAGCGACGATTTCTGGC.............................................................................................................................................................................................	24	20	0.05	1	0	0	0	0	0	1
.......................................................TTCTGGCCTTGGAAAGAAGAATGAGC..........................................................................................................................................................................	26	20	0.05	1	1	0	0	0	0	0
...............................................GCGACGATTTCTGGCCTTGGAAAGAAA.................................................................................................................................................................................	27	20	0.05	1	0	0	0	0	0	1
......................................................................................................................................................................TTCCGAGAGAGCCGCATTATTTCAT............................................................	25	20	0.05	1	1	0	0	0	0	0
......................................................................GAAGAATGAGCAAGCAAGAAG................................................................................................................................................................	21	20	0.05	1	1	0	0	0	0	0
..................................................................................................................................................................CAAATTCCGAGAGAGCCGCATTAT.................................................................	24	20	0.05	1	0	0	0	0	1	0
.......................................ACAGCCAAGCGACGATTTCTC...............................................................................................................................................................................................	21	20	0.05	1	1	0	0	0	0	0
..............................................................................................................................................................................................TCCCATATCAATGCGTGCTAAGACCGCT.................................	28	20	0.05	1	1	0	0	0	0	0
..............................................................................................................TGACTTTATGAAAGAATACTTGGCCC...................................................................................................................	26	20	0.05	1	0	0	0	0	1	0
...........................................................................ATGAGCAAGCAAGAAGACATT...........................................................................................................................................................	21	20	0.05	1	0	0	0	0	0	1
.TCAAATCAAGCCCACATTGTC.....................................................................................................................................................................................................................................	21	20	0.05	1	1	0	0	0	0	0
...................................................CGATTTCTGGCCTTGGAAAGA...................................................................................................................................................................................	21	20	0.05	1	1	0	0	0	0	0
.....ATCAAGCCCACATTGTCTTGGTAC..............................................................................................................................................................................................................................	24	20	0.05	1	0	0	0	0	1	0
..........................................................................................................................................................CTAACAATCAAATTCCGAGAGAGC.........................................................................	24	20	0.05	1	0	0	0	1	0	0
..................................................................................................................................TGGCCTTGGGTCACATGAGCC....................................................................................................	21	20	0.05	1	0	0	1	0	0	0
..............................................................CTTGGAAAGAAGAATGAGCAAG.......................................................................................................................................................................	22	20	0.05	1	1	0	0	0	0	0
...............................................GCGACGATTTCTGGCCTTGGAAAGA...................................................................................................................................................................................	25	20	0.05	1	0	0	0	0	1	0
...............................................................................................................................................CATGAGCCCAACTAACAAT.........................................................................................	19	20	0.05	1	1	0	0	0	0	0
..............................................................................................................................................................CAATCAAATTCCGAGAGAGCC........................................................................	21	20	0.05	1	0	0	0	0	1	0
................................................................................................................................................................................................CCATATCAATGCGTGCTAAGACCGCACA...............................	28	20	0.05	1	1	0	0	0	0	0
....................................................................................................................................................................................CATTATTTCATCCCATATCAATGCGT.............................................	26	20	0.05	1	1	0	0	0	0	0
.............................................................................................................TTGACTTTATGAAAGAATACTT........................................................................................................................	22	20	0.05	1	1	0	0	0	0	0
...............................................................................................................................................................................................CCCATATCAATGCGTGCTAAGACCG...................................	25	20	0.05	1	1	0	0	0	0	0
....................................................GATTTCTGGCCTTGGAAAGAAGAATGAG...........................................................................................................................................................................	28	20	0.05	1	1	0	0	0	0	0
.................................................................................................................................................................TCAAATTCCGAGAGAGCCGCAT....................................................................	22	20	0.05	1	0	0	0	0	0	1
.......................................................TTCTGGCCTTGGAAAGAAGAATGAG...........................................................................................................................................................................	25	20	0.05	1	1	0	0	0	0	0
......................................................................................................................................................................TTCCGAGAGAGCCGCATTATTTCAC............................................................	25	20	0.05	1	0	0	0	0	1	0
........................................................................AGAATGAGCAAGCAAGAAGA...............................................................................................................................................................	20	20	0.05	1	0	0	0	0	0	1
...............................................................TTGGAAAGAAGAATGAGCAAGCAAGAAG................................................................................................................................................................	28	20	0.05	1	1	0	0	0	0	0
...............................................................................................................................................................................................CCCATATCAATGCGTGCTAAGACA....................................	24	20	0.05	1	1	0	0	0	0	0
......................................CACAGCCAAGCGACGATTTCTGGCC............................................................................................................................................................................................	25	20	0.05	1	0	0	0	0	1	0
...........................................................................................................................................................TAACAATCAAATTCCGAGAGAG..........................................................................	22	20	0.05	1	0	0	1	0	0	0
.......................................ACAGCCAAGCGACGATTTCTGGCCTTG.........................................................................................................................................................................................	27	20	0.05	1	1	0	0	0	0	0
.............CACATTGTCTTGGTACGTCTT.........................................................................................................................................................................................................................	21	20	0.05	1	0	0	0	1	0	0
.................................................................................................................................................TGAGCCCAACTAACAATCAAA.....................................................................................	21	20	0.05	1	1	0	0	0	0	0
................................................CGACGATTTCTGGCCTTGGAAAG....................................................................................................................................................................................	23	20	0.05	1	1	0	0	0	0	0
...........................................................................................................................GAATACTTGGCCTTGGGTCACATGAG......................................................................................................	26	20	0.05	1	0	0	0	0	0	1
...................................................CGATTTCTGGCCTTGGAAAGAA..................................................................................................................................................................................	22	20	0.05	1	1	0	0	0	0	0
..................................................................................................................................................................CAAATTCCGAGAGAGCCGCATC...................................................................	22	20	0.05	1	0	0	0	0	1	0
..............................................................................................................TGACTTTATGAAAGAATACTT........................................................................................................................	21	20	0.05	1	1	0	0	0	0	0
....AATCAAGCCCACATTGTCT....................................................................................................................................................................................................................................	19	20	0.05	1	0	0	1	0	0	0
..................................................................................................................................................................CAAATTCCGAGAGAGCCGCATT...................................................................	22	20	0.05	1	1	0	0	0	0	0
..........................................................................................................................AGAATACTTGGCCTTGGGTCT............................................................................................................	21	20	0.05	1	1	0	0	0	0	0
........................................................................................................................AAAGAATACTTGGCCTTGGGTCACA..........................................................................................................	25	20	0.05	1	1	0	0	0	0	0
......................................................................................................................TGAAAGAATACTTGGCCTTGGGTCACA..........................................................................................................	27	20	0.05	1	1	0	0	0	0	0
.......................................ACAGCCAAGCGACGATTTCTGG..............................................................................................................................................................................................	22	20	0.05	1	1	0	0	0	0	0
................................................................................................................................................................................................CCATATCAATGCGTGCTAAGACCGC..................................	25	20	0.05	1	1	0	0	0	0	0
............................................................................................................................................................................GAGAGCCGCATTATTTCATCCC.........................................................	22	20	0.05	1	0	0	0	0	0	1
..CAAATCAAGCCCACATTGTCTTGG.................................................................................................................................................................................................................................	24	20	0.05	1	1	0	0	0	0	0
....................................................................................................................TATGAAAGAATACTTGGCCTTGG................................................................................................................	23	20	0.05	1	1	0	0	0	0	0
....................................................................................................................................................................................................ATCAATGCGTGCTAAGACC....................................	19	20	0.05	1	1	0	0	0	0	0
.............................................................................GAGCAAGCAAGAAGACATTCGGC.......................................................................................................................................................	23	20	0.05	1	0	0	0	1	0	0
...........................................................................................................................................................................................TCATCCCATATCAATGCGTGCTAAGAC.....................................	27	20	0.05	1	1	0	0	0	0	0
.................................................GACGATTTCTGGCCTTGGATTT....................................................................................................................................................................................	22	20	0.05	1	1	0	0	0	0	0
.....ATCAAGCCCACATTGTCTTGGTACGTC...........................................................................................................................................................................................................................	27	20	0.05	1	0	0	0	0	1	0
.....................................ACACAGCCAAGCGACGATTTCTG...............................................................................................................................................................................................	23	20	0.05	1	1	0	0	0	0	0
................................................................................................................................................................................................CCATATCAATGCGTGCTAAG.......................................	20	20	0.05	1	0	0	1	0	0	0
............................................................................................................................................TCACATGAGCCCAACTAACAA..........................................................................................	21	20	0.05	1	1	0	0	0	0	0
.......................................................................................................................................................................................TATTTCATCCCATATCAATGCGTGCT..........................................	26	20	0.05	1	1	0	0	0	0	0
.............................................................................................................TTGACTTTATGAAAGAAT............................................................................................................................	18	20	0.05	1	1	0	0	0	0	0
.....ATCAAGCCCACATTGTCTTGGTACGTCT..........................................................................................................................................................................................................................	28	20	0.05	1	1	0	0	0	0	0
.............................................................................................................................................................ACAATCAAATTCCGAGAGAG..........................................................................	20	20	0.05	1	0	0	0	0	0	1
.........................................................................GAATGAGCAAGCAAGAAGACATTCGGC.......................................................................................................................................................	27	20	0.05	1	1	0	0	0	0	0
................................................CGACGATTTCTGGCCTTGGAAAA....................................................................................................................................................................................	23	20	0.05	1	1	0	0	0	0	0
.................................................GACGATTTCTGGCCTTGGAAA.....................................................................................................................................................................................	21	20	0.05	1	1	0	0	0	0	0
........................................................................................................................................................................................ATTTCATCCCATATCAATGCGTGCTAAG.......................................	28	20	0.05	1	1	0	0	0	0	0
TTCAAATCAAGCCCACATTGT......................................................................................................................................................................................................................................	21	20	0.05	1	0	0	1	0	0	0
.........................................................CTGGCCTTGGAAAGAAGAATG.............................................................................................................................................................................	21	20	0.05	1	1	0	0	0	0	0
............CCACATTGTCTTGGTACGTCTTA........................................................................................................................................................................................................................	23	20	0.05	1	0	0	0	0	1	0
.................................................................................................................................................................TCAAATTCCGAGAGAGCCGCATC...................................................................	23	20	0.05	1	0	0	1	0	0	0
....................................................................................................................TATGAAAGAATACTTGGCCTTGGG...............................................................................................................	24	20	0.05	1	1	0	0	0	0	0
TTCAAATCAAGCCCACATTGTCTTGGTA...............................................................................................................................................................................................................................	28	20	0.05	1	1	0	0	0	0	0
..........................................................................................................................................................CTAACAATCAAATTCCGAGAGAGCC........................................................................	25	20	0.05	1	0	0	0	0	1	0
..........................................................................................................................................................................................TTCATCCCATATCAATGCGTGC...........................................	22	20	0.05	1	1	0	0	0	0	0
..........................................................................................................................AGAATACTTGGCCTTGGGTCACAT.........................................................................................................	24	20	0.05	1	1	0	0	0	0	0
.................................................................................................................................................................TCAAATTCCGAGAGAGCCGCATTC..................................................................	24	20	0.05	1	0	0	0	0	1	0
.................................................................................................................................................................TCAAATTCCGAGAGAGCCGCATT...................................................................	23	20	0.05	1	0	0	0	0	1	0
....................................................GATTTCTGGCCTTGGAAAGAA..................................................................................................................................................................................	21	20	0.05	1	0	0	0	0	0	1
TTCAAATCAAGCCCACATTG.......................................................................................................................................................................................................................................	20	20	0.05	1	1	0	0	0	0	0
....................................................................................................................TATGAAAGAATACTTGGCC....................................................................................................................	19	20	0.05	1	1	0	0	0	0	0

droGri2

TTTAAGAACAATCCCAGTCAACTTGGTCATTCATTCGACATAGCACGCCGGAGATTTCTCAGCTTGGAACGCCGTTTGGCACAATCTTCGGAACTTTGCTTACAGTATTGTCAATTCATGGAGGAGTATGAACGTTTAGAACACATGTCGCTGGTCACAGAACCAAACTTATCGGAACCTCACTACTACATACCTCACCATTGCGTTTTGAAGCCCAGCAGTGAAACCACAAAGCTTCGAGTGGTCTTCGA	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
........................................................................................................GTATTGTCAATTCATGGAGGAGTA...........................................................................................................................	24	20	0.05	1	0	1
......................................................................................................................................................................................CTACTACATACCTCACCATTGCGTT............................................	25	20	0.05	1	0	1
..........................TCATTCATTCGACATAGCACGCC..........................................................................................................................................................................................................	23	20	0.05	1	1	0

droAna3

TTTAAGTCGGATCCAAGCGTTTTGGGCAACTCATTCGAGGTAGCCAAACGCCGTTTTTTGTCGCTCGAGAGAAGATTATCTCGAGATCCAAACTTAAAGAAAATGTATGTGGAATTCATGGAAGAATGCGAATCCCTAGGTCATATGTCCCCTGTAAGCAATGAGGTTCTTGCTACTCCACACTACGTCATACCCCACCAGTGTGTCTTGCGGCCGCAAAGTACAACGACCAAGCTTCGAATCGTTTTCGA	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
...............................................................................................................................................................................CTCCACACTACGTCATACCCCA......................................................	22	20	0.25	5	5	0	0	0	0	0
....................................................................GAGAAGATTATCTCGAGATCCAAACT.............................................................................................................................................................	26	5	0.20	1	1	0	0	0	0	0
......................................................................................................................................................................................CTACGTCATACCCCACCAGTGTGTCT...........................................	26	20	0.15	3	3	0	0	0	0	0
..............................................................................................................................................................................................TACCCCACCAGTGTGTCTTGCGGC.....................................	24	20	0.10	2	0	2	0	0	0	0
..........................................................................................................................................................TAAGCAATGAGGTTCTTGCTACTCCACAC....................................................................	29	12	0.08	1	0	1	0	0	0	0
...................................................................................................................................................................AGGTTCTTGCTACTCCACACT...................................................................	21	17	0.06	1	0	1	0	0	0	0
...................................................................................................................................ATCCCTAGGTCATATGTCCCCTGT................................................................................................	24	17	0.06	1	1	0	0	0	0	0
.................................................................................................AGAAAATGTATGTGGAATTCAT....................................................................................................................................	22	20	0.05	1	1	0	0	0	0	0
..............................................................................................................................................................................................................CTTGCGGCCGCAAAGTACAACGAC.....................	24	20	0.05	1	1	0	0	0	0	0
.TTAAGTCGGATCCAAGCGTTTTGG..................................................................................................................................................................................................................................	24	20	0.05	1	0	0	0	0	0	1
.................................................................................................................................................................................................CCCACCAGTGTGTCTTGCGGC.....................................	21	20	0.05	1	0	1	0	0	0	0
...............................................................................................................................................................................CTCCACACTACGTCATACCCCACCA...................................................	25	20	0.05	1	1	0	0	0	0	0
.......................................................................................................................................................................................TACGTCATACCCCACCAGTGT...............................................	21	20	0.05	1	1	0	0	0	0	0
....................................................................................................................................................................................CACTACGTCATACCCCACCAGTGTG..............................................	25	20	0.05	1	1	0	0	0	0	0

droBip1

TTTAAATCGGATCCAAGCGTTTTGGGAAACTCGTTCGAGGTAGCCAAACGCCGTTTTTTGTCGCTTGAGAGAAGATTATCTCGAGATCCGAATTTAAAGAAAATGTATGTGGAATTTATGGAAGAATACGAATCCTTAGGTCATATGTCCCCTACAAGCAATGATGTTCTTGCTACTCCACACTACGTCATACCCCATCAGTGTGTCTTACGGCCTCAAAGCACATCGACCAAATTACGAGTCGTGTTTGA	Size	Hit Count	Total Norm	Total
No Reads

droKik1

TTTAAATCTGATCCAAATGGGTTGGGCAACTCCTTTGAGGTTGCAAAACGGCGGTTTTTGTCGCTTGAGCGAAGGTTGTCTCGAGACCCCAACATGAAGACCATGTACATGGAATTCATGGACGAATATCTCGCCATAGGTCATATGTCGCCTACAGACAATAAAATCCCTTCCACTCCACATTATGTCATCGCTCATCAATGTGTGCTAAGGCCCCAGAGTACGTCTACAAAACTACGCGTCATTTTCGA	Size	Hit Count	Total Norm	Total
No Reads

droFic1

TTTAAATCTGATCCAGCTGGTTTGGGCAACTCATTCGAGGTTGTAAAAAGGAGGTTTTTGTCGCTCGAAAGAAGGTTGTCTCGAGATCCTGAATTAAAGAAAATGTATCTCGAAATCATGGAAGAATACCTCGCGTTAGGTCATATGTCTCCTACAGACAATAAAGTTCCTTTGACTCCACATTATGTAATTCCGCATCAGTGTGTCCTTAGGCCCCAGAGTACGTCTACTAAGTTGCGTGTCGTGTTTGA	Size	Hit Count	Total Norm	Total
No Reads

droEle1

TTTAAATCTGATCCAAATGGGTTGGGCAATTAATTTGAAGTTGCAAAAGG--GGCTTTTGTCTTTTGAAAGAAACTTGTCTCGAGACCATGAGTTCAAGAAAATGTACTTAGAATTTATGGAAGAGTACCAATCCGTAGGTCTTATGTCTCCCACAGATAACAAAATTCCTTTTACTCCGCTCTATGCCATCCCTCATAAATGTGTTCTTAGGCCCCAGAGTACGTCCACCTAACTGAGGGTCGTTTTTGA	Size	Hit Count	Total Norm	Total
No Reads

droRho1

TTTAAATCTGATCCAAATGAGTTAGGCAACTCTTTTGAAGTTGCAAAACGGCGGTTTTTGTCGCTTGAAAGAAGGCTGTCTCGAGACCCTGAGATGAAGAAAATATACTTAGAATTTATGGAGGAGTACCTTTCCTTAGGTCATATGTCTCCTACAGATACT---CTTTCTTCTGCTCCACATTATGTTATCCCACATCAATGTGTTCTGAGACCCCAAAGTACGTCAACCAAGTTACGTGTCGTTTTTGA	Size	Hit Count	Total Norm	Total
No Reads

droBia1

TTTAAATCTAATCCAAATAGGTTAGAAAGCTCCT-TGAAGTTGCTGAACCGCTGTTTTTGTCGCTTGAAAGAAGGTTGACTCGAGACCCTGACATGAAAAAAATGTATTTAGAATTCA----AAAGTTCCTTTCTTTAGGTCATATGCCTCCTACAGA---TAAAATTTCTTCTGCTTCACATTATGTTACCCCACCCCAATGTGTTCAGAGACCCCAAAGTACGTCAGCCAAGTTACGTATACTTTTCGA	Size	Hit Count	Total Norm	Total
No Reads

droTak1

TTTAAATCTGATCCAAATGGGTTGGGCAACTCCTTTGAAGTTGCAAAACGGCGGTTTTTGTCGCTTGAAAGAAGGTTGTCTCGAGACCCTGACATGAAGAAAATGTATTTAGAATTTATGGAAGAGTACCTTTCCTTAGGTCATATGTCTCCTACAGA---TAAAATTCCTTCTGCTCCACATTATGTTATCCCACACCAATGCGTTCTGAGACCCCAAAGTACGTCAACCAAGTTACGTGTCGTTTTCGA	Size	Hit Count	Total Norm	Total
No Reads

droEug1

TTCAAATCTGACCCAAACACTCTTGGATTGTCCTATGAAGTTGCGAAACGTAGATTTTTGTCGCTTGAAAGTAGATTGTCAAGAGAGCCTTCGTTAAAGAAAATGTATCTGGATTTCATGGAGGAATACGTATCAATGGGCCACTTGTCCACTTCTGATGATAAAATTCCAGATGGCCCACACTATTTCATTCCGTACCAATGAGTGCTGCGGCCTCAAAGCACCTCAACCAAGTTTAGAGTTGTATTCGA	Size	Hit Count	Total Norm	Total
No Reads

dm3

TTTAAGTCTGATCAAAATGGGTTGAGCAACTCCTTCGAAGTTGCAAAAA---------CTTCGCCGGAGCGAAGGTTGTCCCGAGATGCTAAAT-----------------GAGTTAATTTAAGAATATCTCGCAGTAGGTCATATATCGAACACAGAAATCAAAATCCCTTCCAC-CCACATTAAGTTATTCCCCATCAATGCGTGTTAAGGCCCCAGAGTACGTCTACAAAATTGCTTGTCGAGTTCGA	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
..TAAGTCTGATCAAAATGGGTTGAGC................................................................................................................................................................................................................................	25	3	2.33	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................GTTGTCCCGAGATGCTAAAT-----------------G...........................................................................................................................................	21	3	2.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.TTAAGTCTGATCAAAATGGGTTGAGC................................................................................................................................................................................................................................	26	3	2.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
........................................................................................................................TAAGAATATCTCGCAGTAGGT..............................................................................................................	21	3	2.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................AAAATTGCTTGTCGAGTTCGA	21	3	2.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................ATGGGTTGAGCAACTCCTTCG......................................................................................................................................................................................................................	21	3	1.67	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0
......TCTGATCAAAATGGGTTGAGC................................................................................................................................................................................................................................	21	3	1.67	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................TCTACAAAATTGCTTGTCGAGTTCGA	26	3	1.67	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
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..............................................................................................................................................................................................................................ACGTCTACAAAATTGCTTGTCG.......	22	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................TTCGCCGGAGCGAAGGTTGTCCCGAG......................................................................................................................................................................	26	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................TGCGTGTTAAGGCCCCAGAGTACG..........................	24	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................TCCCGAGATGCTAAAT-----------------GAGTT.......................................................................................................................................	21	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........TCAAAATGGGTTGAGCAACT............................................................................................................................................................................................................................	20	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............AAAATGGGTTGAGCAACTCCTTC.......................................................................................................................................................................................................................	23	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................TGCAAAAA---------CTTCGCCGGAGCGAAGGTT..............................................................................................................................................................................	27	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................CGCCGGAGCGAAGGTTGTC...........................................................................................................................................................................	19	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................TAAGAATATCTCGCAGTAGG...............................................................................................................	20	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droSim2

-------------CAAATGGATTAGGCAACTCCTTCGAGGTTGCAAAACGGCGGTTTTTGTCGCTTGAGCGAAGGTTGTCTCGAGATCCTAACTTGAAGACCATGTACTTGGAATTCATGGAAGAATATCTCGCCCTAGGTCATATGTCGCCTACAGACAACAAAATCCCTTCCACTCCACATTATGTCATTCCCCATCAATGCGTGTTAAGGCCCCAGAGTACGTCAACAAAGTTGCGCGTCGTGTTCGA	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
................................................CGGCGGTTTTTGTCGCTTGAGCGAAGG................................................................................................................................................................................	27	2	1.00	2	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0
.........................................TGCAAAACGGCGGTTTTTGTCGCTTG........................................................................................................................................................................................	26	2	1.00	2	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0

droSec2

CTAAAACTCCATTTGGATTCTTTAGGAGATTCCTATCCTCAGGCTTTGCGGAGATTCTTGTCGCTGGAAAGGAAGCTTACAAAGCACCCTGGCTTGAGGGTTAAATATGCGGCGTTCATGAAGGAGTATCGTGATCTGGGACATATGTCGCCTGTGCCCGCCTCCGAGGTCAGCTCGTGCCGATATTTTTTGCCACATCATTGCGTCATGAAGGAGGATAGCACTACCACCAAGCTTCGCGTTGTCTTTGA	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
....AACTCCATTTGGATTCTTTAGGAT...............................................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0
.........................................................................................................................................................................................................TGCGTCATGAAGGAGGATAGCACTA.........................	25	20	0.25	5	5	0	0	0
...................................................................................................................TCATGAAGGAGTATCGTGATCTG.................................................................................................................	23	20	0.20	4	4	0	0	0
.......................................................................GAAGCTTACAAAGCACCCTGGC..............................................................................................................................................................	22	20	0.20	4	4	0	0	0
...................................................................................................................TCATGAAGGAGTATCGTGATCTGGG...............................................................................................................	25	20	0.15	3	0	1	1	1
..............................................................................................................................................................................................TGCCACATCATTGCGTCATGAAGGA....................................	25	20	0.10	2	2	0	0	0
.............................TTCCTATCCTCAGGCTTTGCGGAGA.....................................................................................................................................................................................................	25	20	0.10	2	0	0	2	0
.............................................................................................................................................CATATGTCGCCTGTGCCCGCCTCCGA....................................................................................	26	20	0.10	2	2	0	0	0
...................................................................................................................TCATGAAGGAGTATCGTGATCTGGGAC.............................................................................................................	27	20	0.10	2	2	0	0	0
..........................................................................................................................................GGACATATGTCGCCTGTGCCC............................................................................................	21	20	0.05	1	1	0	0	0
.......................................................................GAAGCTTACAAAGCACCCTGGCTTGAG.........................................................................................................................................................	27	20	0.05	1	0	0	1	0
................................................................................................................................................................................................................TGAAGGAGGATAGCACTACCACCAAGC................	27	20	0.05	1	0	0	1	0
..............................TCCTATCCTCAGGCTTTGCGGAGATTC..................................................................................................................................................................................................	27	20	0.05	1	0	0	1	0
...............................................................................................................................................TATGTCGCCTGTGCCCGCCTCCGAGGTC................................................................................	28	20	0.05	1	1	0	0	0
.........................................................................................................................................................................................................TGCGTCATGAAGGAGGATAGCAT...........................	23	20	0.05	1	1	0	0	0
.......................................................................GAAGCTTACAAAGCACCCTGGCTTGAGT........................................................................................................................................................	28	20	0.05	1	1	0	0	0
.............................................................................................................................................................................................TTGCCACATCATTGCGTCATGAAGGA....................................	26	20	0.05	1	0	0	1	0
...............................................................................................................................................................................................GCCACATCATTGCGTCATGAAGGAGG..................................	26	20	0.05	1	1	0	0	0
...............................................................CTGGAAAGGAAGCTTACAAAGCACCC..................................................................................................................................................................	26	20	0.05	1	1	0	0	0
...................................................................................................................TCATGAAGGAGTATCGTGATCT..................................................................................................................	22	20	0.05	1	1	0	0	0
...................................................................................................................TCATGAAGGAGTATCGTGATCTGG................................................................................................................	24	20	0.05	1	0	0	1	0
...................................................................................................................TCATGAAGGAGTATCGTGATCTGGGA..............................................................................................................	26	20	0.05	1	0	0	0	1
.......................................................................................................................................................................................................ATTGCGTCATGAAGGAGGATAGCACT..........................	26	20	0.05	1	1	0	0	0
..............................................................................................................................................ATATGTCGCCTGTGCCCGC..........................................................................................	19	20	0.05	1	0	0	0	1
...................................................................................................................TCATGAAGGAGTATCGTGATCTGGGACAT...........................................................................................................	29	20	0.05	1	1	0	0	0
...............................................................................................................................ATCGTGATCTGGGACATATGTCGCC...................................................................................................	25	20	0.05	1	0	0	1	0
............................................................................................................................AGTATCGTGATCTGGGACATATGTCG.....................................................................................................	26	20	0.05	1	1	0	0	0
........................................................................................................................................................TGTGCCCGCCTCCGAGGTCAGCTCG..........................................................................	25	20	0.05	1	1	0	0	0
...................................................................................................................TCATGAAGGAGTATCGTGATCTGGTTT.............................................................................................................	27	20	0.05	1	1	0	0	0
...................................................................................................................TCATGAAGGAGTATCGTGATCTGGTC..............................................................................................................	26	20	0.05	1	1	0	0	0
................................................................................................................................................ATGTCGCCTGTGCCCGCCTCC......................................................................................	21	20	0.05	1	0	0	1	0
.......................................................................................................................................................................................TATTTTTTGCCACATCATTGCGTCATG.........................................	27	20	0.05	1	1	0	0	0
..........................................................................................................ATGCGGCGTTCATGAAGGAGTATC.........................................................................................................................	24	20	0.05	1	0	0	0	1
.............................TTCCTATCCTCAGGCTTTGCGGAT......................................................................................................................................................................................................	24	20	0.05	1	1	0	0	0
..............................TCCTATCCTCAGGCTTTGCGGAGATT...................................................................................................................................................................................................	26	20	0.05	1	1	0	0	0
.............................................................................................................................GTATCGTGATCTGGGACATATGTCGCC...................................................................................................	27	20	0.05	1	0	0	1	0
...................................................................................................................TCATGAAGGAGTATCGTGATCTGT................................................................................................................	24	20	0.05	1	1	0	0	0
.........................................................................................................TATGCGGCGTTCATGAAGGAGTATC.........................................................................................................................	25	20	0.05	1	1	0	0	0
...................................................................................................................TCATGAAGGAGTATCGTGATC...................................................................................................................	21	20	0.05	1	0	0	1	0
.......................................................................GAAGCTTACAAAGCACCCTGGCTTGAT.........................................................................................................................................................	27	20	0.05	1	1	0	0	0
............................................................................................................................................................................................TTTGCCACATCATTGCGTCATGAAGG.....................................	26	20	0.05	1	1	0	0	0
.....................................................................................................TAAATATGCGGCGTTCATGAAGGAGT............................................................................................................................	26	20	0.05	1	1	0	0	0

droYak3

TTTAAATCTGATCCAAATGGATTAGGCAACTCCTTCGAGGTTGCAAAACGGCGGTTTTTGTCGCTTGAGCGAAGGTTGTCTCGAGATCCTAACTTGAAGACAATGTACTTGGAATTCATGGAAGAATATCTCGCCCTAGGTCATATGTCGCCTACAGACAACAAAATCCCTTCCACTCCACATTATGTCATTCCCCATCAATGCGTGTTAAGGCCCCAGAGTACGCCAACAAAGTTGCGCGTCGTGTTCGA	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
.......................................................................................................TGTACTTGGAATTCATGGAAGAATA...........................................................................................................................	25	20	0.50	10	0	5	3	0	0	0	2	0	0	0	0
.......................................................................................................TGTACTTGGAATTCATGGAAGAATATC.........................................................................................................................	27	20	0.20	4	0	3	0	0	0	0	1	0	0	0	0
..............................TCCTTCGAGGTTGCAAAACGGCGGTT...................................................................................................................................................................................................	26	20	0.20	4	0	1	3	0	0	0	0	0	0	0	0
....................................................................................................................................................................................CATTATGTCATTCCCCATCAATGCGTG............................................	27	20	0.20	4	0	4	0	0	0	0	0	0	0	0	0
.................................................GGCGGTTTTTGTCGCTTGAGCGAAGGT...............................................................................................................................................................................	27	20	0.20	4	0	4	0	0	0	0	0	0	0	0	0
.................................................GGCGGTTTTTGTCGCTTGAGCGAAGG................................................................................................................................................................................	26	20	0.20	4	0	4	0	0	0	0	0	0	0	0	0
.................................................GGCGGTTTTTGTCGCTTGAGCGAAG.................................................................................................................................................................................	25	20	0.15	3	0	3	0	0	0	0	0	0	0	0	0
.................TGGATTAGGCAACTCCTTCGAGGT..................................................................................................................................................................................................................	24	20	0.15	3	0	0	3	0	0	0	0	0	0	0	0
....................................................................................................................................................................................CATTATGTCATTCCCCATCAATGCG..............................................	25	20	0.15	3	0	3	0	0	0	0	0	0	0	0	0
.....ATCTGATCCAAATGGATTAGGC................................................................................................................................................................................................................................	22	20	0.10	2	0	0	2	0	0	0	0	0	0	0	0
.........................................TGCAAAACGGCGGTTTTTGTCGCTTG........................................................................................................................................................................................	26	20	0.10	2	0	2	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................CATTATGTCATTCCCCATCAATGCGT.............................................	26	20	0.10	2	0	2	0	0	0	0	0	0	0	0	0
.................................TTCGAGGTTGCAAAACGGCGGTTTTTG...............................................................................................................................................................................................	27	20	0.10	2	0	2	0	0	0	0	0	0	0	0	0
.........................................................................................................TACTTGGAATTCATGGAAGAATATCT........................................................................................................................	26	20	0.10	2	0	2	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................TCCCCATCAATGCGTGTTAAGGCCCCA.................................	27	20	0.10	2	0	2	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................CATTATGTCATTCCCCATCAATGC...............................................	24	20	0.10	2	0	2	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................ACAGACAACAAAATCCCTTCCACTCC........................................................................	26	20	0.10	2	0	2	0	0	0	0	0	0	0	0	0
.........................................................................................................TACTTGGAATTCATGGAAGAATA...........................................................................................................................	23	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
........................................................................................................GTACTTGGAATTCATGGAAGAATATC.........................................................................................................................	26	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0
................................................................................................................................TCTCGCCCTAGGTCATATGTCGC....................................................................................................	23	20	0.05	1	0	0	0	1	0	0	0	0	0	0	0
.......................................................................AAGGTTGTCTCGAGATCCTAACTTG...........................................................................................................................................................	25	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................CAGACAACAAAATCCCTTCCACT..........................................................................	23	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
......TCTGATCCAAATGGATTAGGCAACTC...........................................................................................................................................................................................................................	26	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0
.......CTGATCCAAATGGATTAGGCAACTCC..........................................................................................................................................................................................................................	26	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
.......................................................................................................TGTACTTGGAATTCATGGAAGAA.............................................................................................................................	23	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
............................................................................................................TTGGAATTCATGGAAGAATATCTCGCC....................................................................................................................	27	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................CTCCACATTATGTCATTCCCCATC....................................................	24	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
..................................................................................................................TTCATGGAAGAATATCTCGCCCTAGG...............................................................................................................	26	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
...........TCCAAATGGATTAGGCAACTCCTTCGA.....................................................................................................................................................................................................................	27	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
......................................................................GAAGGTTGTCTCGAGATCCTAACTT............................................................................................................................................................	25	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
.................................................GGCGGTTTTTGTCGCTTGAGCGAA..................................................................................................................................................................................	24	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
.......CTGATCCAAATGGATTAGGCAAC.............................................................................................................................................................................................................................	23	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0
.......................................................................................................TGTACTTGGAATTCATGGAAGAATAT..........................................................................................................................	26	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
.......................................................................................................TGTACTTGGAATTCATGGAAG...............................................................................................................................	21	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
.........................................................................................................TACTTGGAATTCATGGAAGAATATC.........................................................................................................................	25	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
.................TGGATTAGGCAACTCCTTCGAGG...................................................................................................................................................................................................................	23	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................TAGGTCATATGTCGCCTACAGACAACA........................................................................................	27	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................AACAAAGTTGCGCGTCGTGTTC..	22	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
...........................AACTCCTTCGAGGTTGCAAAACGGCGGT....................................................................................................................................................................................................	28	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
................................................................................................................................TCTCGCCCTAGGTCATATGTCGCC...................................................................................................	24	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0
...........TCCAAATGGATTAGGCAACTCCTTC.......................................................................................................................................................................................................................	25	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0
..................................................GCGGTTTTTGTCGCTTGAGCGAAGG................................................................................................................................................................................	25	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
........................................................................................................GTACTTGGAATTCATGGAAGAATA...........................................................................................................................	24	20	0.05	1	0	0	0	0	0	0	1	0	0	0	0
..............................TCCTTCGAGGTTGCAAAACGGCGGTTT..................................................................................................................................................................................................	27	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0
......TCTGATCCAAATGGATTAGGCAACTCC..........................................................................................................................................................................................................................	27	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
............................................................................................................TTGGAATTCATGGAAGAATATCTCGCCC...................................................................................................................	28	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................AGACAACAAAATCCCTTCCACTCC........................................................................	24	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
.TTAAATCTGATCCAAATGGATTAGG.................................................................................................................................................................................................................................	25	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
...................................CGAGGTTGCAAAACGGCGGTTTTTG...............................................................................................................................................................................................	25	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
.................TGGATTAGGCAACTCCTTCGAGGTTG................................................................................................................................................................................................................	26	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
.................................................GGCGGTTTTTGTCGCTTGAGC.....................................................................................................................................................................................	21	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0
.............................................................................................................TGGAATTCATGGAAGAATATCTCGCCC...................................................................................................................	27	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
........................................................................................................................................................TACAGACAACAAAATCCCTTCCA............................................................................	23	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
............................ACTCCTTCGAGGTTGCAAAACGGCGGT....................................................................................................................................................................................................	27	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................AACAAAGTTGCGCGTCGTGTTCGA	24	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
.................................TTCGAGGTTGCAAAACGGCGGTTTTT................................................................................................................................................................................................	26	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................TATGTCATTCCCCATCAATGCGTG............................................	24	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0

droEre2

TTTAAGTCCGATCCAAATCTGTTGGTCAACTCCTTCGAGGTTGCAAAACGGCGGTTTTTGTCACTTGAGCGAAAGTTGTCTCAAGATCCTAACATGAAGACCATGTACTTGGAATTCATGGATGAATATCTCGCCCTAGGTCATATGTCAGCTACAGACAACAAAATCTCTTCCACTCCATATTATATCATTCCCCATCAATGCGTGTTAAGGCCCCAGAGTACGTCAACAAAGTTGCCCCTCGTGCTCGA	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
................................................................................................................................................................................................CCCCATCAATGCGTGTTAAGGCCCCAGA...............................	28	3	1.33	4	0	0	0	0	0	0	4

-9.5	-9.4	-8.7	-8.7

dpe_819

scaffold_152:13260-13410 -

Candidate

Unknown

Predicted structure

Flybase annnotation

Repeatable elements

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads