ID:

dpe_818

 Coordinate:

scaffold_152:12763-12913 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-13.8 -13.6 -13.0 -12.8

Flybase annnotation

CDS [Dper\GL21036-cds]; exon [dper_GLEANR_2951:6]; intron [Dper\GL21036-in]

Repeatable elements

NameClassFamilyStrand
Nobel_I-intLTRPao-
mature
  1. scaffold_161:9861-9885 -
  2. scaffold_171:40686-40710 -
  3. scaffold_1915:1446-1470 -
  4. scaffold_81:209253-209277 -
  5. scaffold_12049:209-233 -
  6. scaffold_124:11720-11744 -
  7. scaffold_125:69421-69445 -
  8. dpe_818  scaffold_152:12818-12842 -
  9. scaffold_152:24983-25007 -
  10. scaffold_193:18203-18227 -
  11. scaffold_2461:898-922 -
  12. scaffold_2537:5576-5600 -
  13. scaffold_985:3013-3037 -
  14. scaffold_1185:3462-3486 -
  15. scaffold_1290:1740-1764 -
  16. scaffold_4546:1459-1483 -
  17. scaffold_5477:702-726 -
  18. scaffold_2501:500-524 -
  19. scaffold_6543:595-619 -
  20. scaffold_691:5250-5274 -
star
  1. scaffold_119:11914-11937 -
  2. scaffold_75:12702-12725 -
  3. scaffold_10752:16-39 -
  4. scaffold_123:18524-18547 -
  5. scaffold_123:69864-69887 -
  6. scaffold_125:69459-69482 -
  7. dpe_818  scaffold_152:12856-12879 -
  8. scaffold_193:18241-18264 -
  9. scaffold_2513:9509-9532 -
  10. scaffold_2537:5614-5637 -
  11. scaffold_532:7151-7174 -
  12. scaffold_563:3811-3834 -
  13. scaffold_985:3051-3074 -
  14. scaffold_1928:3009-3032 -
  15. scaffold_2214:1928-1951 -
  16. scaffold_121:5321-5344 -
  17. scaffold_5477:740-763 -
  18. scaffold_8366:174-197 -
  19. scaffold_6543:633-656 -
  20. scaffold_691:5288-5311 -

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TGGGACTGTACCAGCCCCATTCTTAGCTATCCGGTGTTTGAAAAGGTTGAGTGAGTCTGCGAAGCTCTCATTCCCTAGAGCTGCTAACGTTATTGGGTCCGACTTTTACGTCGATGACTTGTTGACTGGTGCTGCATGCGTAGAGGAGCTAAGGGCAATTAAGTCCGAAGTGTCTCAGGTTCTTCAGACCGCAGGGTTTGAGTTGACTAAGTGGTTTTCAAACTCACCCGAGATCACCGCATCTGAGAGCA
************************************************************************************..................(((((((((((((.....)))))).............)))))))********************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 V111
male body		 M021
embryo
 V050
head
.........................................................................................................................TTGACTGGTGCTGCATGCGTAGAGG......................................................................................................... 25 0 20 0.65 13 13 0 0 0
....................................................................................TAACGTTATTGGGTCCGACTTTTA............................................................................................................................................... 24 0 20 0.15 3 3 0 0 0
...................................................................................................................................................................................................GTTTGAGTTGACTAAGTGG..................................... 19 0 20 0.10 2 0 2 0 0
...........................................................................................................AAGACGATGACTTCTTGACT............................................................................................................................ 20 3 20 0.10 2 0 0 2 0
.........................................................................................................................TTGACTGGTGCTGCATGCGTAGAGGA........................................................................................................ 26 0 20 0.10 2 2 0 0 0
....................................................................................TAACGTTATTGGGTCCGACTTT................................................................................................................................................. 22 0 20 0.10 2 2 0 0 0
....................................TTTGAAAAGGTTGAGTGAGTCTGCGAA............................................................................................................................................................................................ 27 0 20 0.10 2 2 0 0 0
.........................................................................................................................TTGACTGGTGCTGCATGCGTAG............................................................................................................ 22 0 20 0.05 1 1 0 0 0
....................................................................................................................................TGCATGCGTAGAGGAGCTAAGGGCAA............................................................................................. 26 0 20 0.05 1 1 0 0 0
....................................................................................TAACGTTATTGGGTCCGACTT.................................................................................................................................................. 21 0 20 0.05 1 1 0 0 0
.....................CTTAGCTATCCGGTGTTTGAA................................................................................................................................................................................................................. 21 0 20 0.05 1 0 1 0 0
.................................GTGTTTGAAAAGGTTGAGTGAG.................................................................................................................................................................................................... 22 0 20 0.05 1 1 0 0 0
.....................................................................................AACGTTATTGGGTCCGACTTTT................................................................................................................................................ 22 0 20 0.05 1 1 0 0 0
............................................................................................................CGTCGATGACTTGTTGACTGC.......................................................................................................................... 21 1 20 0.05 1 0 0 0 1
......................................TGAAAAGGTTGAGTGAGTCTGCGA............................................................................................................................................................................................. 24 0 20 0.05 1 1 0 0 0
.........................................................................................................................TTGACTGGGGCTGCATGCGTAG............................................................................................................ 22 1 20 0.05 1 1 0 0 0
........................................................................................................................................................................................CAGACCGCAGGGTTTGAGTTGACTAA......................................... 26 0 20 0.05 1 1 0 0 0
.....................................................................................AACGTTATTGGGTCCGACTTTTACGTC........................................................................................................................................... 27 0 20 0.05 1 1 0 0 0
..................................................................................GCTAACGTTATTGGGTCCGA..................................................................................................................................................... 20 0 20 0.05 1 0 1 0 0
.......................................................................................................................................ATGCGTAGAGGAGCTAAGGG................................................................................................ 20 0 20 0.05 1 0 0 0 1
.............................................GTTGAGTGAGTCTGCGAAGC.......................................................................................................................................................................................... 20 0 20 0.05 1 1 0 0 0

Anti-sense strand reads

ACCCTGACATGGTCGGGGTAAGAATCGATAGGCCACAAACTTTTCCAACTCACTCAGACGCTTCGAGAGTAAGGGATCTCGACGATTGCAATAACCCAGGCTGAAAATGCAGCTACTGAACAACTGACCACGACGTACGCATCTCCTCGATTCCCGTTAATTCAGGCTTCACAGAGTCCAAGAAGTCTGGCGTCCCAAACTCAACTGATTCACCAAAAGTTTGAGTGGGCTCTAGTGGCGTAGACTCTCGT
*********************************************************************************************************..................(((((((((((((.....)))))).............)))))))************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 M021
embryo
 V111
male body		 V042
embryo
 V057
head
 V050
head
..............GGGGTAAGAATCGATAGGCCACAAACT.................................................................................................................................................................................................................. 27 0 20 0.75 15 14 0 1 0 0 0
..........................................................................................................ATGCAGCTACTGAACAACTGACCAC........................................................................................................................ 25 0 20 0.70 14 14 0 0 0 0 0
..........................................................................GATCTCGACGATTGCAATAACCCAGGCT..................................................................................................................................................... 28 0 20 0.40 8 1 7 0 0 0 0
.............CGGGGTAAGAATCGATAGGCCACAAACT.................................................................................................................................................................................................................. 28 0 20 0.40 8 8 0 0 0 0 0
.........................................................................................................AATGCAGCTACTGAACAACTGACCA......................................................................................................................... 25 0 20 0.35 7 7 0 0 0 0 0
.............................................................................................................CAGCTACTGAACAACTGACCAC........................................................................................................................ 22 0 20 0.35 7 7 0 0 0 0 0
............................................................................................................GCAGCTACTGAACAGCTGACCAC........................................................................................................................ 23 1 20 0.25 5 5 0 0 0 0 0
.............CGGGGTAAGAATCGATAGGCCACAAAC................................................................................................................................................................................................................... 27 0 20 0.25 5 0 2 0 3 0 0
............................................CCAACTCACTCAGACGCTTCGAGAGT..................................................................................................................................................................................... 26 0 20 0.25 5 5 0 0 0 0 0
............................................................................................................................................................................AGAGTCCAAGAAGTCTGGCGTCCCAAAC................................................... 28 0 20 0.20 4 0 4 0 0 0 0
......................................................................AAGGGATCTCGACGATTGCAATAA............................................................................................................................................................. 24 0 20 0.20 4 0 0 4 0 0 0
..............GGGGTAAGAATCGATAGGCCACAAAC................................................................................................................................................................................................................... 26 0 20 0.20 4 0 4 0 0 0 0
.......................................................GGACGCTTCGAGAGTAAGGGATC............................................................................................................................................................................. 23 1 20 0.20 4 0 4 0 0 0 0
........................................................................GGGATCTCGACGATTGCAATAAC............................................................................................................................................................ 23 0 20 0.20 4 4 0 0 0 0 0
...............GGGTAAGAATCGATAGGCCACAAACT.................................................................................................................................................................................................................. 26 0 20 0.15 3 0 1 2 0 0 0
..............GGGGTAAGAATCGATAGGCCA........................................................................................................................................................................................................................ 21 0 20 0.15 3 3 0 0 0 0 0
.................................................................................................................................................................TCAGGCTTCACAGAGTCCAAGAAG.................................................................. 24 0 20 0.15 3 3 0 0 0 0 0
......................................................................AAGGGATCTCGACGATTGCAATAAC............................................................................................................................................................ 25 0 20 0.15 3 3 0 0 0 0 0
...............GGGTAAGAATCGATAGGCCACAAAC................................................................................................................................................................................................................... 25 0 20 0.15 3 0 0 0 3 0 0
................................................................................................................................................................................................TCCCAAACTCAACTGATTCA....................................... 20 0 20 0.15 3 0 3 0 0 0 0
.................................................................................................................................................................TCAGGCTTCACAGAGTCCAAGAA................................................................... 23 0 20 0.15 3 3 0 0 0 0 0
.CCACCACATGGTCGGGGTAA...................................................................................................................................................................................................................................... 20 3 8 0.13 1 0 1 0 0 0 0
ACCAGGTCATGGTCGGGGTAA...................................................................................................................................................................................................................................... 21 3 9 0.11 1 0 1 0 0 0 0
......................................................................................................GAAAATGCAGCTACTGAACAACTGACCAC........................................................................................................................ 29 0 20 0.10 2 0 2 0 0 0 0
.......................ATCGATAGGCCACAAACTTTTCC............................................................................................................................................................................................................. 23 0 20 0.10 2 2 0 0 0 0 0
.......................................................................................................................................................................TTCACAGAGTCCAAGAAGTCT............................................................... 21 0 20 0.10 2 1 0 0 0 1 0
.....................GAATCGATAGGCCACAAACTTTTCC............................................................................................................................................................................................................. 25 0 20 0.10 2 2 0 0 0 0 0
..................................................................GAGTAAGGGATCTCGACGG...................................................................................................................................................................... 19 1 20 0.10 2 0 0 2 0 0 0
...............................................................................................................GCTACTGAACAACTGACCACGACGT................................................................................................................... 25 0 20 0.10 2 2 0 0 0 0 0
...........................................................................................................TGCAGCTACTGAACAACTGACC.......................................................................................................................... 22 0 20 0.10 2 2 0 0 0 0 0
...........................................TCCAACTCACTCAGACGCTTCGAGAGT..................................................................................................................................................................................... 27 0 20 0.10 2 1 0 0 1 0 0
........................................................................................................................................................................................................................AAGTTTGAGTGGGCTCTAGTGG............. 22 0 20 0.05 1 0 0 1 0 0 0
................................................................................................................................................................TTCAGGCTTCACAGAGTCCAAGA.................................................................... 23 0 20 0.05 1 1 0 0 0 0 0
..........................................................................................................................................................................ACAGAGTCCGAGAAGTCTGGCG........................................................... 22 1 20 0.05 1 1 0 0 0 0 0
.............CGGGGTAAGAATCGATAGGCCACAA..................................................................................................................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0 0
...........................................................................................................................................................................................................................TTTGAGTGGGCTCTAGTGGC............ 20 0 20 0.05 1 1 0 0 0 0 0
........................................................AACGCTTCGAGAGTAAGGGATC............................................................................................................................................................................. 22 1 20 0.05 1 1 0 0 0 0 0
................................................................................................................................................................................TCCAAGAAGTCTGGCGTCCCAAAC................................................... 24 0 20 0.05 1 1 0 0 0 0 0
.......................................................................................................................................................TCCCGTTAATTCAGGCTTCAC............................................................................... 21 0 20 0.05 1 0 1 0 0 0 0
.................................................................AGAGTAAGGGATCTCGACGA...................................................................................................................................................................... 20 0 20 0.05 1 0 0 1 0 0 0
.........................................................................................................................................................................CACAGAGTCCAAGAAGTCTGGCGT.......................................................... 24 0 20 0.05 1 1 0 0 0 0 0
.............CGGGGTAAGAATCGATAGGGCACAAACT.................................................................................................................................................................................................................. 28 1 20 0.05 1 1 0 0 0 0 0
................................................................................................................................CACGACGTACGCATCTCCTCG...................................................................................................... 21 0 20 0.05 1 0 0 0 0 0 1
...................AAGAATCGATAGGCCACAAACTTTTC.............................................................................................................................................................................................................. 26 0 20 0.05 1 1 0 0 0 0 0
.................................................................................................................................................................TCAGGCTTCACAGAGCCCAAGAAGT................................................................. 25 1 20 0.05 1 0 1 0 0 0 0
............................................................................................................GCAGCTACTGAACAACTGACC.......................................................................................................................... 21 0 20 0.05 1 1 0 0 0 0 0
..........GGTCGGGGTAAGAATCGAT.............................................................................................................................................................................................................................. 19 0 20 0.05 1 1 0 0 0 0 0
...........................................................................................................TGCAGCTACTGAACAACTGAC........................................................................................................................... 21 0 20 0.05 1 0 0 1 0 0 0
..........................................TTCCAACTCACTCAGACGCTTCGAGAGT..................................................................................................................................................................................... 28 0 20 0.05 1 1 0 0 0 0 0
..............................................................................................................................................................................................................................GAGTGGGCTCTAGTGGCGTA......... 20 0 20 0.05 1 1 0 0 0 0 0
........................................................................GGGATCTCGACGATTGCAATAA............................................................................................................................................................. 22 0 20 0.05 1 0 0 1 0 0 0
........................................................................GGGATCTCGACGATTGCAATAACCCAGGC...................................................................................................................................................... 29 0 20 0.05 1 0 1 0 0 0 0
........................................................................................................................................ACGCATCTCCTCGATTCCCGTTAATT......................................................................................... 26 0 20 0.05 1 1 0 0 0 0 0
..................................................................................................................................................................CAGGCTTCACAGAGTCCAAGAA................................................................... 22 0 20 0.05 1 1 0 0 0 0 0
........................................................................GGGATCTCGACGATTGCAATAACC........................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0 0
..........................................................................................................................................................................................................................GTTTGAGTGGGCTCTAGTGG............. 20 0 20 0.05 1 0 0 1 0 0 0
................GGTAAGAATCGATAGGACACAAACT.................................................................................................................................................................................................................. 25 1 20 0.05 1 1 0 0 0 0 0
.........................................TTTCCAACTCACTCAGACGCT............................................................................................................................................................................................. 21 0 20 0.05 1 1 0 0 0 0 0
......................................................CAGACGCTTCGAGAGTAAGGGATC............................................................................................................................................................................. 24 0 20 0.05 1 0 1 0 0 0 0
.................GTAAGAATCGATAGGCCACAAAC................................................................................................................................................................................................................... 23 0 20 0.05 1 0 0 0 1 0 0
..................................................................................................................................................................................................................................GGGCTCTAGTGGCGTAGACTCTCGT 25 0 20 0.05 1 1 0 0 0 0 0
.................................................................................................................................................................TCCGGCTTCACAGAGTCCAAGAAGT................................................................. 25 1 20 0.05 1 0 1 0 0 0 0
.............CGGGGTAAGAATCGATAGGCCA........................................................................................................................................................................................................................ 22 0 20 0.05 1 1 0 0 0 0 0
....................................................................GTAAGGGATCTCGACGATTGCA................................................................................................................................................................. 22 0 20 0.05 1 0 0 1 0 0 0
....................AGAATCGATAGGCCACAAACTTT................................................................................................................................................................................................................ 23 0 20 0.05 1 1 0 0 0 0 0
....................................................................................................CTGAAAATGCAGCTACTGAACAACTGACC.......................................................................................................................... 29 0 20 0.05 1 1 0 0 0 0 0
.....................................................ACAGACGCTTCGAGAGTAAGGGATC............................................................................................................................................................................. 25 1 20 0.05 1 1 0 0 0 0 0
...................................................................................................................................................................................................................................GGCCCTAGTGGCGTAGACTCT... 21 1 20 0.05 1 0 0 0 0 1 0
..................................................................................CGATTGCAATAACCCAGGCTGAAAAT............................................................................................................................................... 26 0 20 0.05 1 0 1 0 0 0 0
................................................................................................................................................................................................TCCCAAACTCAACTGATTCAC...................................... 21 0 20 0.05 1 1 0 0 0 0 0
........................................................................................CAATAACCCAGGCTGAAAATG.............................................................................................................................................. 21 0 20 0.05 1 0 0 0 0 1 0
...........................................................................................................................................................GTTAATTCAGGCTTCACAGAGTCCAA...................................................................... 26 0 20 0.05 1 1 0 0 0 0 0
..........................................................................................................ATGCAGCTACTGAACGACTGACCA......................................................................................................................... 24 1 20 0.05 1 1 0 0 0 0 0
........................................................................................................AAATGCAGCTACTGAACAGCTGACCAC........................................................................................................................ 27 1 20 0.05 1 1 0 0 0 0 0
...................................................................AGTAAGGGATCTCGACGATT.................................................................................................................................................................... 20 0 20 0.05 1 0 0 0 0 1 0
......................................................CAGACGCTTCGAGAGGAAGGGATC............................................................................................................................................................................. 24 1 20 0.05 1 1 0 0 0 0 0
........................................................................................................AAATGCAGCTACTGAACAACTGACC.......................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0 0
..........................................................................GATCTCGACGATTGCAATAACCCAGG....................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0 0
..............................GGCCACAAACTTTTCCAACTCACTCAG.................................................................................................................................................................................................. 27 0 20 0.05 1 1 0 0 0 0 0
.............CGGGGTAAGAATCTATAGGCCACAAAC................................................................................................................................................................................................................... 27 1 20 0.05 1 1 0 0 0 0 0
......................................................................................................................................................................CTTCACAGAGTCCAAGAAGTC................................................................ 21 0 20 0.05 1 0 1 0 0 0 0
....................................................................GTAAGGGAGCTCGACGATTTCAA................................................................................................................................................................ 23 2 20 0.05 1 0 0 0 1 0 0
.....................................................................AAAGGGATCTCGACGATTGCAATAAC............................................................................................................................................................ 26 1 20 0.05 1 1 0 0 0 0 0
.....................................................................TAAGGGATCTCGACGATTGCAAT............................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0 0
.....................................................TCAGACGCTTCGAGAGTAAGGGATCT............................................................................................................................................................................ 26 0 20 0.05 1 0 1 0 0 0 0
..................................................................................................................................................................CAGGCTTCACAGAGTACAAGAAGT................................................................. 24 1 20 0.05 1 1 0 0 0 0 0
...........................................................................................................................CTGACCACGACGTACGCATC............................................................................................................ 20 0 20 0.05 1 1 0 0 0 0 0
.................................................................................................................................................................................................................................TGGGCTCTAGTGGCTTAGACTCT... 23 1 20 0.05 1 1 0 0 0 0 0
..........................................TTCCAACTCACTCAGACGCTT............................................................................................................................................................................................ 21 0 20 0.05 1 0 0 0 0 0 1
........................................................................................................................................................................TCACAGAGTCCAAGAAGTCTGGCGTCC........................................................ 27 0 20 0.05 1 1 0 0 0 0 0
...........................................................................................................TGCAGCTACTGAACAGCTGACCAC........................................................................................................................ 24 1 20 0.05 1 1 0 0 0 0 0
.................................................................................................................................................................................................CCCAAACTCAACTGATTCACCAA................................... 23 0 20 0.05 1 1 0 0 0 0 0
.................GTAAGAATCGATAGGCCACAAA.................................................................................................................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0 0
.................................................................................................AGACTGAAAATGCAGCTGCTGTACAA................................................................................................................................ 26 3 20 0.05 1 0 0 0 1 0 0
........................................................................................................................................................................................................................AAGTTTGAGTGGGCTCTGGTG.............. 21 1 20 0.05 1 0 0 1 0 0 0
..............................................................................................................................................................................................................................GATTGGGCGCTAGGGGCGT.......... 19 3 20 0.05 1 0 0 0 0 1 0
..............................................................................................................AGCTACTGAACAACTGACCAC........................................................................................................................ 21 0 20 0.05 1 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_152:12713-12963 - dpe_818 TGGGACTGTACCAGCCCCATTCTTAGCTATCCGGTGTTTGAAAAGGTTGAGTGAGTCTG-CGAAGCTCTCATTCCCTAGAGCTGCTAACGTTATTGGG-TCCGACTTTTACGTCGATGACTTGTTGACTGGTGCTGCATGCGTAGAGGAGCTAAGGGCAATTAAGT-CCGAAGTGTCTCAGGTTCTTCAGACCGCAGGGTTTGAGTTGACTAAGTGGTTTTCAAAC--TCACCCGAGATCACCGCATCTGAGAGCA
dp5 Unknown_group_178:407-657 + TGGGACTGGACCAGCCCCATTCTTAGCTATCCGGTGTTTGAAAAGGTTGAGTGAGTCTG-CGAAGCTCTCATTCCCTAGAGCTGCTAACGTTATTGGG-TCCGACTTTTACGTCGATGACTTGTTGACTGGTGCTGCATGCGTAGAGGAGCTAAGGGCAATTAAGT-CCGAAGTGTCTCAGGTTCTGCAGACCACAGGGTTTGAGTTGACTAAGTGGTTTTCAAAC--TCACCCGAGATCACCGCATCTGAGAGCA
droWil2 scf2_1100000004967:3451720-3451969 - TGGTACGGTGCCAGCTCCCTTTCTGGCAATACGGTGTTTGACAAAGCTGGGTGAGATGA-TGGAATTGTCATTCCCAAAAGCTGCTGAAGTTATCAGA-CACGATTTTTATGTTGATGACATGTTGACTGGTGCTGGATGCGTTGAGGACCTTCTGGCAATTAAGT-CTGAATTGTCACAGGCATTGTTTAAAGCAGGATTTGATTTAACCAAATGGTTTTTAAAT--AGTTTTGAAAGCCCCGCTCCC-TTAGCA
droVir3 scaffold_12958:3070209-3070456 + CGGCACGGCGCCTGCCCCGTTTTAGGCAATAAGGTGCATAACAAAACTAGGTGAGATCT-GCGAGTCATTATACCATAAAGCTTCTGACGTTACAAGG-CAAAACTTTTATGTCGATGATTTACTGACTGGTGCTGCATGCGTAAAGAACCTTCTGACAATTAAGT-CTGCAGTGTCGCCAATAATCAAAAATGCAGGTTTCGAACTAACCAAATGGTTTTCGAAT--TCTCCTGAGTTTTCTGCAACAAAGG---
droMoj3 scaffold_6541:1474060-1474300 + TGGGACAGCGACTGCTCCATTCTTAGCAATTCGATGTTTGAAACATCTGAGCGACT-TGCATGCTTCCACTCATCCATCTGCTGCAA-GATCGTTAGCCCAAGATTTCTATGTTGATGACTTGTTGACAGGAGTAGATAGCGTTGAAGAATTGT-GCTTGTTAGATCGACACTTGATAGCAATTCTTCAAGCGTTTGGGTTTCCTCTCACAAAATGGTCGTCCAAT--TGTAA----------ACAACTTGCAGCA
droGri2 scaffold_8059:2377-2624 - TGGAACAGCCTCAGCGCCATACTTAGCCATACGCAGCCTGCATTTTTTGGC-AAATCTGTGTCGAACTGAGTATCCAATCGGTGCTGCAGTCATTGAA-TCGTCGTTCTATGTAGATGACCTGTTATCTGGAGGTGAGGACATAGAAACTCTTCGCACAATCAAGG-ATCAAGTCACGAAAATTCTTCATCGTGGTCACTTTCCGTTATCTAAGTGGCATTCAAAT--CAAGCCCAATTTATCGAAAACG---TCG
droAna3 scaffold_13234:3488-3738 + TGGCACTGCACCAGCCCCATTCCTGGCCATAAGGTGTTTGAAGAGGTTGAGTGAATCCG-CGAAAAATACATTCCCTCGAGCTGCTAAAGTTATTGGG-TCTGACTTTTACGTCGACGACTTGTTAACGGGTGCTGGTTGCGTGGAGGAGCTAAAGACAATTAAGT-CTGAAGTAACTCAGGTTCTTCAAAACGCTGGGTTTGAATTGAGCAAGTGGTTTTCAAAC--TCGCCTGAAGTTACTGCATCCGAGAGCA
droBip1 scf7180000391653:6194-6444 + TGGCACTGCACCAGCCCCATTCCTGGCCATAAGGTGTTTGAAGAGGTTGAGTGAATCTG-TGAAAAATACATTCCCTCGAGCTGCCAAAGTTATTGGG-TCCGACTTTTACGTCGACGACATGTTAACGGGTGCTGGTTGCATTGAGGAGCTAAAGACAATTAAGT-CTGAAGTAACTCAGGTTCTTCAAAACGCTGGGTTTGAATTGAGCAAGTGGTTTTCAAAC--TCGCCTGAAGTTACTGCATCCGAGAGCA
droKik1 scf7180000302132:7483-7733 - TGGTACTGGACAAGCCCCTTTTCTGGCTATTCGGTGTTTAGAAAGGTTAAGTGAATCTG-CGAAACTTTCATTCCCTAGAGCTGCCGACGTAATTGGA-TCCGATTTTTACGTCGATGACATGCTAACTGGTGCTGCATGCGTAGAGGAGCTACAGACAATCAAGT-CTGAAGTGTGTCAGGTTCTTCAAACATCAGGTTTTGAATTGACAAAGTGGTTTTCAAAC--TCACCTGAGGTCACTGCATCTGAGAGCA
droFic1 scf7180000453822:14092-14342 + TGGAACTGGCCCAGCTCCATATCTAGCGATTCGGTCTTTAAAAAGGTTGAGTGAATCTG-CCAAGCTTTCATTCCCTAGAGCTGCTGAAGTTATTGGA-TCCGACTTTTACGTCGATGATATGCTAACTGGTGCTGCATGCGTCGAGGAGCTCAGATCTATCAGGT-CTGAAGTGTCTCAGGTTCTTCAAACCGCAGGGTTTGAATTGACAAAGTGGTTTTCAAAC--TCACCTGAGGTCACCGCATCTGAGAGCA
droEle1 scf7180000490651:46966-47215 - TGGTTCTGGACCAGCCCTATTTCTAGCTATTCGGTGTTTAAGAAGGTTGAGTGAG-CTG-CAAAACTTTCATTCTCTAGAGCTTCTAAAGTTATTGGA-TCCGTCTTTTACGTCGATGATATGTTGAGTGGTGCTGAATGCGTAGATGAGCTAAAGACTATTAAGT-CTGTAGTGTCTCAGGTTCTTCAAACAGCAGGATTTGAATTAACAAAGTGGTTTTCTAAC--TCACCTGAAGTCACCGCATCTAAGAACA
droRho1 scf7180000777377:21973-22223 - TGGTACTGGACCAGCCCCGTTTTTGGCTATTCGGTGTTTAAAAAGGTTAAGTGAGTCTG-CCAAAGTTTCTTTTCCTAGAGCTGCTAAGGTTATTGGA-TCCGACTTTTATGTCGATGATATGTTGACTGGTGCTGCATGCGTAGAGGAGTTAAAGGCTATTAAGT-CTGAAGTATCTCAGGTTCTTCAAACTGCAGGTTTTGAATTGACAAAGTGGTTTTCAAAC--TCACCTGACGTTACCGCATCTGAGAGCA
droBia1 scf7180000302352:21476-21682 + --------------------------------------------GGTTAAAAGAGTCTG-CCAAACTTTGTTTTACTAGAGCTGGGTAAGTTATTGGA-TACGACCTTTATGTCAGTGACATGTTGACTGTTGCTGCCTGCATAGAGGAGTTAAAGACTTTTATGT-CTGAAGTTTCTCAGGTTCTTCAAACTGGAGGTATTGAATTGACAAAGTGGTTTTCAAAT--TCACCTGACGTCACCGCATATGAGAGAA
droTak1 scf7180000414385:15904-16154 + TGGGACTGGACCAGCCCCATTTCTGGCAATTCGGTGTTTAAAAAGGTTAAGCGAGTCTG-CCAAACTTTCTTTTCCTAGAGCTGCTGAAGTTATTGGA-TCCGACTTTTATGTCGATGACATGTTGACTGGTGCTGCATGCGTAGAGGAGTTAAAGACTATTAAGT-CTGAAGTGTCTCAGGTTCTTCAAACTGCAGGTTTTGAATTGACAAAGTGGTTTTCAAAC--TCACCTGACGTCACCGCATCTGAGAGCA
droEug1 scf7180000407098:3161-3407 - TGGAACTTTGCCAGCTCCGTTTATGGTGATCCGGTGTTTAATGCAGCTTGGAGAGATGG-CGCAAGCTAAGT-AAG-TAAGCTGCGAAAGTCATTCAG-AAAGATTTCTATGTTGACAATATGTTGACAGGCGCCGGAAGCGTTGAGAACCTGCAAAGCCTCGTG--ATGAAGTTTCTTTGATT-TGCAAGAGGCAGGTTTTGAATTGGCAAAGTGGTTTTCGAAC--TGCCCAGAGATCTCCGCATCTGAGAGCG
dm3 chrU:400597-400847 + TGATACTAGACTAGCCCCATTTCTGCCTATTCGGTGTTTATAACTTTTGAATTCGGCAT-GAAAATTTGCATTCCCTAGAGCTGCCGACGTTATTGGA-TCCGATTTTTACGTCGATGACCTGTTAAATGGTACTGCATGCGTAAAGGAGCTAAAAACAATTAAGT-CTGAAGTGTCTCAGGTTCTTTAAAAAGCAGGATTTGAATTGACGAAGTGGTTTTCAAAC--TCACCTGAGGTCACTGCATTTGAGAGCA
droSim2 node_83318:1473-1697 - --------------------------CTATTCGGTGTTTAAAGAGGTTGAGTGAATCTG-CTAAATGTTCATTCCCTAGAGCTGCCGACGTGATTGGA-TCCGATTTTTACGTCGATGACATGTTAACTGGTGCTGCATGCGTAGAGGAGCTAAAGACAATTAAGT-CTGAAGTGTCTCAGGTTCTTCAAACAGCAGGTTTTGAATTGACAAAGTGGTTTTCAAAC--TCACCTGAGGTCACTGCATCTGAGAGCA
droSec2 scaffold_642:867-1119 + CGGCACCAAACCAGCCTCCTTCTTGTCCGTAAGGGCTATGCAGCAGTTGTCAATCGATG-AGCAGGCATCGTTTCCCATTGGATCAGAAATCCTTCGG-CGTGATTTCTACGTGGATGATCTTATCTCCGGCTCAGGCACGGTAAAGGATGCTATCAGCATAATGC-AACAGACGGCTGGCATTCTTGCGAAGGGCAAGCTCAAGCTAAGGAAATGGTGCTCTAACATTCCGCTGGAGGGTGTGCCGCCGAGGACA
droYak3 v2_chrUn_6631:74545-74795 - TGGTACTGGACCAGCCCCATTTCTGGCTATTCGGTGTTTAAAGAGGTTGAGTGAATCTG-CTAAATTTTCATTTCCTAGAGCAGCCGACGTAATTGGA-TCCGATTTTTACGTCGATGACATGTTAACTGGTGCTGCATGCGTAGAGGAGCTAAAGACAATTAAGT-CTGAAGTGTCTCAGGTTCTTCAAACAGCAGGTTTTGAATTGACAAAGTGGTTTTCAAAC--TCACCTGAGGTCACTGCATCTGAGAGCA
droEre2 scaffold_4845:1145431-1145680 - TGGTACTGGACCAGCCCCATTGCTGGCTATTCGGTGTTTTAAAAGGGTGAGTGAATCTG-CAAGATTTTCATTTCCTAGAGCTGCCGACTTAATTGGA-TCAGATTTTTACGTCGATGACATGTTAACTGGTGCTGCATGCGTAAAGGAGCTAATGACAATGTAGT-CTGAAGTGTCTCAGATTCTTCAAGCAGCA-GTTTTGAATTGACAAAGTGGTTTTTAAAC--TCACCTGAGATCACTGCATTTGAGAGCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
TGGGACTGTACCAGCCCCATTCTTAGCTATCCGGTGTTTGAAAAGGTTGAGTGAGTCTG-CGAAGCTCTCATTCCCTAGAGCTGCTAACGTTATTGGG-TCCGACTTTTACGTCGATGACTTGTTGACTGGTGCTGCATGCGTAGAGGAGCTAAGGGCAATTAAGT-CCGAAGTGTCTCAGGTTCTTCAGACCGCAGGGTTTGAGTTGACTAAGTGGTTTTCAAAC--TCACCCGAGATCACCGCATCTGAGAGCASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...........................................................................................................................TTGACTGGTGCTGCATGCGTAGAGG............................................................................................................25200.65130130000
.....................................................................................TAACGTTATTGGG-TCCGACTTTTA..................................................................................................................................................24200.153030000
......................................................................................................................................................................................................GTTTGAGTTGACTAAGTGG.......................................19200.102000002
...........................................................................................................................TTGACTGGTGCTGCATGCGTAGAGGA...........................................................................................................26200.102020000
.....................................................................................TAACGTTATTGGG-TCCGACTTT....................................................................................................................................................22200.102020000
....................................TTTGAAAAGGTTGAGTGAGTCTG-CGAA................................................................................................................................................................................................27200.102020000
...........................................................................................................................TTGACTGGTGCTGCATGCGTAG...............................................................................................................22200.051010000
......................................................................................................................................TGCATGCGTAGAGGAGCTAAGGGCAA................................................................................................26200.051010000
.....................................................................................TAACGTTATTGGG-TCCGACTT.....................................................................................................................................................21200.051010000
.....................CTTAGCTATCCGGTGTTTGAA......................................................................................................................................................................................................................21200.051000001
.................................GTGTTTGAAAAGGTTGAGTGAG.........................................................................................................................................................................................................22200.051010000
......................................................................................AACGTTATTGGG-TCCGACTTTT...................................................................................................................................................22200.051010000
..............................................................................................................CGTCGATGACTTGTTGACTGC.............................................................................................................................21200.051000100
......................................TGAAAAGGTTGAGTGAGTCTG-CGA.................................................................................................................................................................................................24200.051010000
...........................................................................................................................................................................................CAGACCGCAGGGTTTGAGTTGACTAA...........................................26200.051010000
......................................................................................AACGTTATTGGG-TCCGACTTTTACGTC..............................................................................................................................................27200.051010000
...................................................................................GCTAACGTTATTGGG-TCCGA........................................................................................................................................................20200.051000001
.........................................................................................................................................ATGCGTAGAGGAGCTAAGGG...................................................................................................20200.051000100
.............................................GTTGAGTGAGTCTG-CGAAGC..............................................................................................................................................................................................20200.051010000
dp5
TGGGACTGGACCAGCCCCATTCTTAGCTATCCGGTGTTTGAAAAGGTTGAGTGAGTCTG-CGAAGCTCTCATTCCCTAGAGCTGCTAACGTTATTGGG-TCCGACTTTTACGTCGATGACTTGTTGACTGGTGCTGCATGCGTAGAGGAGCTAAGGGCAATTAAGT-CCGAAGTGTCTCAGGTTCTGCAGACCACAGGGTTTGAGTTGACTAAGTGGTTTTCAAAC--TCACCCGAGATCACCGCATCTGAGAGCASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.........................................................................................................................TGTTGACTGGTGCTGCATGCGTAG...............................................................................................................24860.7548608600200319790
.........................................................................................................................TGTTGACTGGTGCTGCATGCGTAGA..............................................................................................................25857.5046006910401292930
.........................................................................................................................TGTTGACTGGTGCTGCATGCGTAGAGG............................................................................................................27826.6321306000000441090
.........................................................................................................................TGTTGACTGGTGCTGCATGCGT.................................................................................................................221024.1024106800408143180
.........................................................................................................................TGTTGACTGGTGCTGCATGCGTAGAG.............................................................................................................26814.881190261000048440
.........................................................................................................................TGTTGACTGGTGCTGCATGCG..................................................................................................................211014.801480391000087210
.................................GTGTTTGAAAAGGTTGAGTGAGTC.......................................................................................................................................................................................................241114.451590135403012410
.........................................................................................................................TGTTGACTGGTGCTGCATGCGTA................................................................................................................231012.00120080001003270
.................................GTGTTTGAAAAGGTTGAGTGAGT........................................................................................................................................................................................................231110.0011009720106130
..............................................................................................................................................................................................................TGACTAAGTGGTTTTCAAAC--TCACC.......................2569.335604660000310
..............................................................................................................................................................................................................TGACTAAGTGGTTTTCAAAC--TCACCC......................2657.603803260000000
.....................................................................................TAACGTTATTGGG-TCCGACTTTTA..................................................................................................................................................2496.7861033000002080
..............................................................................................................................................................................................................TGACTAAGTGGTTTTCAAAC--TCACCCG.....................2756.603302560100100
............................................................................TAGAGCTGCTAACGTTATTGGG-T............................................................................................................................................................2395.785205010000100
.....................................................................................TAACGTTATTGGG-TCCGACTTTT...................................................................................................................................................2395.2247032000001410
..............................................................................................................................................................................................................TGACTAAGTGGTTTTCAAAC--TCACCCGA....................2855.002502220000010
.....................................................................................TAACGTTATTGGG-TCCGACTTT....................................................................................................................................................2294.894403820000310
.................................GTGTTTGAAAAGGTTGAGTGAG.........................................................................................................................................................................................................22114.825304600003310
.....................................................................................TAACGTTATTGGG-TCCGACTTTTACG................................................................................................................................................2694.5641028001002100
............................................................................TAGAGCTGCTAACGTTATTGGG-TC...........................................................................................................................................................2494.564103320006000
............................................................................TAGAGCTGCTAACGTTATTGGG-TCC..........................................................................................................................................................2594.444003310002400
.................................................................................................................................................................TAAGT-CCGAAGTGTCTCAGGTTCT......................................................................2464.172501900000600
....................................................................................................................TGACTTGTTGACTGGTGCTGCATGCG..................................................................................................................2684.1333020000014170
............................................................................TAGAGCTGCTAACGTTATTGGG-TCCGA........................................................................................................................................................2793.783403200001010
..............................................................................................................................................................................................................TGACTAAGTGGTTTTCAAAC--TCAC........................2463.672201830000100
...........................................................................................................................TTGACTGGTGCTGCATGCGTAGAGG............................................................................................................2583.6329040000011140
............................................................................TAGAGCTGCTAACGTTATTGGG-.............................................................................................................................................................2293.563202210106020
............................................................................TAGAGCTGCTAACGTTATTGGG-TCCG.........................................................................................................................................................2692.892602500001000
..................................................................................TGCTAACGTTATTGGG-TCCGACT......................................................................................................................................................2382.752202000200000
..................................................................................TGCTAACGTTATTGGG-TCCGACTT.....................................................................................................................................................2482.752202200000000
.........................................................................................................................TGTTGACTGGTGCTGCATGC...................................................................................................................20112.733002000000640
.........................................................................................................................................................................................................TGAGTTGACTAAGTGGTTTTCAAAC--............................2562.50150700102320
.........................................................................................................................TGTTGACTGGTGCTGCATGCGTAGAA.............................................................................................................2682.502007100001020
.................................GTGTTTGAAAAGGTTGAGTGA..........................................................................................................................................................................................................21112.362601710303200
.....................................................................................TAACGTTATTGGG-TCCGACTTTTAC.................................................................................................................................................2592.332101440200010
....................................TTTGAAAAGGTTGAGTGAGTCTG-....................................................................................................................................................................................................23112.272502200001200
............................................................................................................................TGACTGGTGCTGCATGCGTAGAGG............................................................................................................2482.251804000002120
..................................................................................TGCTAACGTTATTGGG-TCCGACTTT....................................................................................................................................................2582.251801700001000
.............................................................................................................................................................................................................TTGACTAAGTGGTTTTCAAAC--TCACCCG.....................2852.20110220100600
.................................GTGTTTGAAAAGGTTGAGTG...........................................................................................................................................................................................................20112.002201800003100
............................................................................TAGAGCTGCTAACGTTATTGG...............................................................................................................................................................2192.001801600002000
....................................TTTGAAAAGGTTGAGTGAGTCTG-C...................................................................................................................................................................................................24111.912101700102010
.....................................................................................TAACGTTATTGGG-TCCGACTTTTACGT...............................................................................................................................................2791.891701410002000
...............................................................................................................................................................................................................GACTAAGTGGTTTTCAAAC--TCACCC......................2551.8090720000000
.....................................................................................TAACGTTATTGGG-TCCGACTT.....................................................................................................................................................2191.781601600000000
............................................................................................................................TGACTGGTGCTGCATGCGTAGAGGAGC.........................................................................................................2781.75140000000590
..................................TGTTTGAAAAGGTTGAGTGAGTC.......................................................................................................................................................................................................23111.731901710100000
.........................................................................................................................TGTTGACTGGTGCTGCATG....................................................................................................................19111.641801400000400
...................................................................................GCTAACGTTATTGGG-TCCGACTT.....................................................................................................................................................2381.50120900100200
.........................................................TG-CGAAGCTCTCATTCCCTAGAGC..............................................................................................................................................................................24101.501501230000000
..........................................................................................................................GTTGACTGGTGCTGCATGCGTAGAGG............................................................................................................2681.50120900000300
...........................................................................................................................TTGACTGGTGCTGCATGCGTAG...............................................................................................................2281.50120700000320
...................................................................................GCTAACGTTATTGGG-TCCGACTTT....................................................................................................................................................2481.501201200000000
...............................................................................................................................................................................................................GACTAAGTGGTTTTCAAAC--TCACC.......................2461.5090900000000
.........................................................................................................................TGTTGACTGGTGCTGCATGCGTAA...............................................................................................................24121.331604000001200
....................................................................................................................TGACTTGTTGACTGGTGCTGCATG....................................................................................................................2491.33120800000130
...........................................................................................................................TTGACTGGTGCTGCATGCGTAGA..............................................................................................................2381.25100800000200
..........................................................................................................................GTTGACTGGTGCTGCATGCGTAG...............................................................................................................2381.25100900000010
...............................................................................................................................................................................................................GACTAAGTGGTTTTCAAAC--TCACCCG.....................2651.2060600000000
....................................TTTGAAAAGGTTGAGTGAGTCTG-CGA.................................................................................................................................................................................................26111.181301200001000
.................................................................................................................................................................TAAGT-CCGAAGTGTCTCAGG..........................................................................2071.1480700001000
......TGGACCAGCCCCATTCTTAGCTATC.................................................................................................................................................................................................................................2581.1390710000010
..................................................................TCTCATTCCCTAGAGCTGCTAACGT.....................................................................................................................................................................25101.10110900000110
...............................................................................................................................................................................................................GACTAAGTGGTTTTCAAAC--TCACCCGA....................2751.0050410000000
..............................................................................................................................................................................................................TGACTAAGTGGTTTTCAAAC--TCACCCGAG...................2951.0050230000000
.........................................................................................................................TGTTGACTGGTGCTGCATGCGTAGAAA............................................................................................................2781.0080610000100
......................................................................................AACGTTATTGGG-TCCGACTTTTAC.................................................................................................................................................2491.0090600100200
.......................TAGCTATCCGGTGTTTGAAAAGGT.................................................................................................................................................................................................................24141.00140700001420
.................................................................................................................................................................TAAGT-CCGAAGTGTCTCAGGTTC.......................................................................2361.0060410100000
..............................................................................................................................................................................................................TGACTAAGTGGTTTTCAAAC--TCA.........................2361.0060600000000
......................TTAGCTATCCGGTGTTTGAAAAGGT.................................................................................................................................................................................................................25141.00140900102020
...........................................................................................................................TTGACTGGTGCTGCATGCGTAGAGGA...........................................................................................................2681.0080000000710
..................................................................TCTCATTCCCTAGAGCTGCTAACG......................................................................................................................................................................24100.9090900000000
......................................................................................AACGTTATTGGG-TCCGACTTTTACG................................................................................................................................................2590.8980400000400
......TGGACCAGCCCCATTCTTAGCTATCC................................................................................................................................................................................................................................2680.8870610000000
............................................................................................................TACGTCGATGACTTGTTGACTGGTGC..........................................................................................................................2680.8870300000220
............................................................................................................................TGACTGGTGCTGCATGCGTAGAGGA...........................................................................................................2580.8870000000430
...........................TATCCGGTGTTTGAAAAGGTTGAG.............................................................................................................................................................................................................24110.8290000000450
.........................................................................................................................TGTTGACTGGTGCTGCATGCGA.................................................................................................................22100.8080200000600
..................................................................................................................................................................................................................TAAGTGGTTTTCAAAC--TCACCCGAGA..................2650.8040301000000
...................................................................................GCTAACGTTATTGGG-TCCGACT......................................................................................................................................................2280.7560600000000
............................................................................................................................TGACTGGTGCTGCATGCGTAGAG.............................................................................................................2380.7560200000400
...................................................................................GCTAACGTTATTGGG-TCCGAC.......................................................................................................................................................2180.7560600000000
....................................................................................................................TGACTTGTTGACTGGTGCTGCATGCGT.................................................................................................................2780.7560000000600
.........................................................................................................................TGTTGACTGGTGCTGCATGCGTAGG..............................................................................................................2580.7560200000400
.........................................................................................................................TGTTGACTGGTGCTGCATGCGTAGAGA............................................................................................................2780.7560000100230
..........................................AAGGTTGAGTGAGTCTG-CGAAGC..............................................................................................................................................................................................23110.7380510000110
.......................................GAAAAGGTTGAGTGAGTCTG-CGAAGC..............................................................................................................................................................................................26110.7380300001220
.................................GTGTTTGAAAAGGTTGAGTGAGTCTG-....................................................................................................................................................................................................26110.7380500000210
....................................TTTGAAAAGGTTGAGTGAGTCT......................................................................................................................................................................................................22110.7380710000000
.............................................................................AGAGCTGCTAACGTTATTGGG-TC...........................................................................................................................................................2390.6760510000000
.....................................................................................TAACGTTATTGGG-TCCGACT......................................................................................................................................................2090.6760400100100
....................................................................................................................TGACTTGTTGACTGGTGCTGCAT.....................................................................................................................2390.6760300000030
......................................................................................................................................TGCATGCGTAGAGGAGCTAAGGGC..................................................................................................2490.6760200000310
........................................................................................................................TTGTTGACTGGTGCTGCATGCGTAGA..............................................................................................................2660.6740100000210
..............................................................................................................................................................................................................TGACTAAGTGGTTTTCAAAC--TC..........................2260.6740300100000
......................................................................................AACGTTATTGGG-TCCGACTTTTA..................................................................................................................................................2390.6760600000000
.......................TAGCTATCCGGTGTTTGAAAAGG..................................................................................................................................................................................................................23140.6490700000110
..................................TGTTTGAAAAGGTTGAGTGAGT........................................................................................................................................................................................................22110.6470700000000
..................................TGTTTGAAAAGGTTGAGTGAG.........................................................................................................................................................................................................21110.6470500001010
...........................................................................................................................TTGACTGGTGCTGCATGCGTAGAG.............................................................................................................2480.6350500000000
........................................................................TCCCTAGAGCTGCTAACGTTATTGGG-.............................................................................................................................................................2680.6350300000200
..........................................................................................................................GTTGACTGGTGCTGCATGCGTAGA..............................................................................................................2480.6350500000000
............................................................................TAGAGCTGCTAACGTTATTGGG-TCCGAC.......................................................................................................................................................2880.6350500000000
......TGGACCAGCCCCATTCTTAGCTATCCGG..............................................................................................................................................................................................................................2880.6350300000020
..........................................................................................................................GTTGACTGGTGCTGCATGCGT.................................................................................................................21100.6060600000000
...............................................................................................................................................................................................................GACTAAGTGGTTTTCAAAC--TCACCCGAG...................2850.6030300000000
................................................................................................................................................................TTAAGT-CCGAAGTGTCTCAGG..........................................................................2170.5740200000020
.................................................................................................................................................................TAAGT-CCGAAGTGTCTCAGGTT........................................................................2270.5740400000000
............................................................................................................................................................................................................................TCAAAC--TCACCCGAGATCACCGCATC........2670.5740300100000
..................................................................................TGCTAACGTTATTGGG-TCCGA........................................................................................................................................................2190.5650500000000
......................................................................................AACGTTATTGGG-TCCGACTTT....................................................................................................................................................2190.5650500000000
......................................................................................................................................TGCATGCGTAGAGGAGCTAAGG....................................................................................................2290.5650300000020
....................................................................................................................TGACTTGTTGACTGGTGCTGCATGC...................................................................................................................2590.5650100000400
.............................................................................AGAGCTGCTAACGTTATTGGG-T............................................................................................................................................................2290.5650500000000
.................................GTGTTTGAAAAGGTTGAGTGAGA........................................................................................................................................................................................................23110.5560600000000
.....................................TTGAAAAGGTTGAGTGAGTCTG-C...................................................................................................................................................................................................23110.5560500001000
....................................TTTGAAAAGGTTGAGTGAGTCTG-CG..................................................................................................................................................................................................25110.5560500000100
....................................TTTGAAAAGGTTGAGTGAGTC.......................................................................................................................................................................................................21110.5560600000000
.............................TCCGGTGTTTGAAAAGGTTGAGTGA..........................................................................................................................................................................................................25110.5560400000020
.............................TCCGGTGTTTGAAAAGGTTGAGTGAGT........................................................................................................................................................................................................27110.5560410001000
.....................................TTGAAAAGGTTGAGTGAGTCTG-....................................................................................................................................................................................................22110.5560600000000
.............................................................................................................................................................................................................TTGACTAAGTGGTTTTCAAAC--TCA.........................2460.5030300000000
............................................................................................................................TGACTGGTGCTGCATGCGTAGA..............................................................................................................2280.5040200000020
............................................................................................................TACGTCGATGACTTGTTGACTGGTG...........................................................................................................................2580.5040200000020
............................................................................................................................TGACTGGTGCTGCATGCGTAGAGGAG..........................................................................................................2680.5040000000130
............................................................................................................TACGTCGATGACTTGTTGACTGG.............................................................................................................................2380.5040300000010
.............................................................................................................................................................................................................TTGACTAAGTGGTTTTCAAAC--TCACC.......................2660.5030300000000
.........................................................................................................................TGTTGACTGGTGCTGCATGCGTAGAGGA...........................................................................................................2880.5040200000020
......TGGACCAGCCCCATTCTTAGCTATCCG...............................................................................................................................................................................................................................2780.5040400000000
........................................................................TCCCTAGAGCTGCTAACGTTATTGG...............................................................................................................................................................2580.5040400000000
..........................................................................................................................GTTGACTGGTGCTGCATGCGTA................................................................................................................22100.5050500000000
.......................................................................................................................................................TAAGGGCAATTAAGT-CCGAAGTG.................................................................................2360.5030000000300
.....................................TTGAAAAGGTTGAGTGAGTCTG-CG..................................................................................................................................................................................................24110.4550500000000
.............................TCCGGTGTTTGAAAAGGTTGAGTGAG.........................................................................................................................................................................................................26110.4550100100210
.....................................................................................TAACGTTATTGGG-TCCGACTTTTAA.................................................................................................................................................2590.4440400000000
......................................................................................AACGTTATTGGG-TCCGACTTTTACGT...............................................................................................................................................2690.4440400000000
......................................................................................AACGTTATTGGG-TCCGACTT.....................................................................................................................................................2090.4440400000000
....................................................................................................................TGACTTGTTGACTGGTGCTGC.......................................................................................................................2190.4440100000210
......................TTAGCTATCCGGTGTTTGAAAAGG..................................................................................................................................................................................................................24140.4360500001000
....................TCTTAGCTATCCGGTGTTTGAAAAGG..................................................................................................................................................................................................................26140.4360600000000
.................................................................................................................................................................TAAGT-CCGAAGTGTCTCAGGT.........................................................................2170.4330300000000
..............................................................................................................................................................................................................TGACTAAGTGGTTTTCAAAC--T...........................2170.4330300000000
.................................GTGTTTGAAAAGGTTGAG.............................................................................................................................................................................................................18120.4250400000010
.............................................................................................................................................................................................................TTGACTAAGTGGTTTTCAAAC--TCACCCGA....................2950.4020200000000
...................................................TGAGTCTG-CGAAGCTCTCATTCCC....................................................................................................................................................................................24100.4040310000000
....................................................................TCATTCCCTAGAGCTGCTAACGT.....................................................................................................................................................................23100.4040400000000
..........................................................................................................................................TGCGTAGAGGAGCTAAGGGC..................................................................................................20100.4040200000020
..........................................................................................................................................TGCGTAGAGGAGCTAAGGG...................................................................................................19100.4040200101000
................................................................................................................................................................................................................ACTAAGTGGTTTTCAAAC--TCACCCG.....................2550.4020200000000
.........................................................TG-CGAAGCTCTCATTCCCTAG.................................................................................................................................................................................21100.4040210000100
....................................................................TCATTCCCTAGAGCTGCTAACG......................................................................................................................................................................22100.4040200200000
..................................................................................TGCTAACGTTATTGGG-TCCGAC.......................................................................................................................................................2280.3830300000000
..........................................................................................................................GTTGACTGGTGCTGCATGCGTAGAG.............................................................................................................2580.3830300000000
..................................................................................TGCTAACGTTATTGGG-TCCGACTTTT...................................................................................................................................................2680.3830300000000
...................................................................................GCTAACGTTATTGGG-TCCGACTTTT...................................................................................................................................................2580.3830000000300
.........................................................................................................................TGTTGACTGGTGCTGCATGCGTAGT..............................................................................................................2580.3830100000200
.........................................................................................................................TGTTGACTGGTGCTGCATGCGTAGAGT............................................................................................................2780.3830300000000
............................................................................................................................TGACTGGTGCTGCATGCGTAG...............................................................................................................2180.3830000000210
..................................................................................TGCTAACGTTATTGGG-TCCGACTTTTA..................................................................................................................................................2780.3830200000010
...............................CGGTGTTTGAAAAGGTTGAGTGAGTC.......................................................................................................................................................................................................26110.3640400000000
..........................................................................................................................GTTGACTGGTGCTGCATGC...................................................................................................................19110.3640400000000
................................GGTGTTTGAAAAGGTTGAGTGAG.........................................................................................................................................................................................................23110.3640400000000
.....................................TTGAAAAGGTTGAGTGAGTCTG-CGA.................................................................................................................................................................................................25110.3640300001000
......................................TGAAAAGGTTGAGTGAGTCTG-CGA.................................................................................................................................................................................................24110.3640000100030
......................................................................................................................................TGCATGCGTAGAGGAGCTAAGGG...................................................................................................2390.3330200001000
...........................................................................................................................................................GGCAATTAAGT-CCGAAGTGTCTCAGG..........................................................................2660.3320200000000
.........................................................................................................................................................................................................TGAGTTGACTAAGTGGTTTTCAAA...............................2460.3320100000100
.........................................................................................................................................................................................................................TTTTCAAAC--TCACCCGAGATCACCG............2560.3320000000200
............................................................................TAGAGCTGCTAACGTTATTGGG-TCCGT........................................................................................................................................................2790.3330300000000
..........................................................................................................................................................................................................GAGTTGACTAAGTGGTTTTCAAAC--............................2460.3320200000000
......................................................................................AACGTTATTGGG-TCCGACTTTT...................................................................................................................................................2290.3330300000000
................................................................................................................................................................................................................................AC--TCACCCGAGATCACCGCATCTGAG....2660.3320200000000
........................................................................................................................TTGTTGACTGGTGCTGCATGCGTAG...............................................................................................................2560.3320000000200
.......................................................................................ACGTTATTGGG-TCCGACTTTTA..................................................................................................................................................2290.3330300000000
.........................................................................................................................TGTTGACTGGTGCTGCATGCGTAGAGGGAG.........................................................................................................3090.3330000000300
TGGGACTGGACCAGCCCCATTCTTAGC.....................................................................................................................................................................................................................................2790.3330300000000
.............................................................................................................................................................................................................TTGACTAAGTGGTTTTCAAAC--TCAA........................2560.3320200000000
......TGGACCAGCCCCATTCTTAGCTA...................................................................................................................................................................................................................................2390.3330300000000
.....................................................................................................................................................................T-CCGAAGTGTCTCAGGTTCT......................................................................2090.3330300000000
...............................................................................................................................................................................................................GACTAAGTGGTTTTCAAAC--TC..........................2160.3320110000000
....................................................................................................................TGACTTGTTGACTGGTGCTG........................................................................................................................2090.3330200000010
......TGGACCAGCCCCATTCTTAGCTAT..................................................................................................................................................................................................................................2490.3330300000000
...........................TATCCGGTGTTTGAAAAGGTTGA..............................................................................................................................................................................................................23130.3140300000100
.........................................................................................................................TGTTGACTGGTGCTGCATGCGTT................................................................................................................23100.3030100100010
..........................................................................................................................GTTGACTGGTGCTGCATGCG..................................................................................................................20100.3030300000000
.......................................................TCTG-CGAAGCTCTCATTCCCTAGAGC..............................................................................................................................................................................26100.3030300000000
.....................................................................................TAACGTTATTGGG-TCCGACTTTTACA................................................................................................................................................26100.3030300000000
..............................................................................................................................................TAGAGGAGCTAAGGGCAATTAAG...........................................................................................2370.2920100001000
..............................................................................................................................................TAGAGGAGCTAAGGGCAATTAAGT-CC.......................................................................................2670.2920200000000
.............................................................................................................................................................CAATTAAGT-CCGAAGTGTCTCAGGT.........................................................................2570.2920100001000
..................................................................................................................................................................................................CAGGGTTTGAGTTGACTAAGTGG.......................................2370.2920000000200
......................................TGAAAAGGTTGAGTGAGTCTG-CGAAGC..............................................................................................................................................................................................27110.2730010000020
......................................TGAAAAGGTTGAGTGAGTCTG-....................................................................................................................................................................................................21110.2730300000000
......................................TGAAAAGGTTGAGTGAGTCTG-CGAAG...............................................................................................................................................................................................26110.2730300000000
...........................................AGGTTGAGTGAGTCTG-CGAAG...............................................................................................................................................................................................21110.2730300000000
.....................................TTGAAAAGGTTGAGTGAGTCTG-CGAA................................................................................................................................................................................................26110.2730100000200
...............................CGGTGTTTGAAAAGGTTGAGTGAG.........................................................................................................................................................................................................24110.2730300000000
.................................GTGTTTGAAAAGGTTGAGTGAA.........................................................................................................................................................................................................22110.2730300000000
................................GGTGTTTGAAAAGGTTGAGTGAGTC.......................................................................................................................................................................................................25110.2730300000000
.......................................GAAAAGGTTGAGTGAGTCTG-CGAAG...............................................................................................................................................................................................25110.2730100000020
.................................GTGTTTGAAAAGGTTGAGTGAGTCTA-....................................................................................................................................................................................................26110.2730100000200
......................................TGAAAAGGTTGAGTGAGTCTG-CG..................................................................................................................................................................................................23110.2730300000000
...............................CGGTGTTTGAAAAGGTTGAGTGAGT........................................................................................................................................................................................................25110.2730100001100
.................................GTGTTTGAAAAGGTTGAGTGAGTCT......................................................................................................................................................................................................25110.2730210000000
............................................................................................................TACGTCGATGACTTGTTGACTGGT............................................................................................................................2480.2520000000200
..........................................AAGGTTGAGTGAGTCTG-CGAAGCTC............................................................................................................................................................................................2580.2520200000000
.......................................................................TTCCCTAGAGCTGCTAACGTTATTGG...............................................................................................................................................................2680.2520200000000
.................................GTGTTTGAAAAGGTTGAGT............................................................................................................................................................................................................19120.2530300000000
....................................................................TCATTCCCTAGAGCTGCTAACGTTAT..................................................................................................................................................................2680.2520000001010
..........................................................................................................TTTACGTCGATGACTTGTTGACTGG.............................................................................................................................2580.2520100000010
...........................................................................................................TTACGTCGATGACTTGTTGACTGG.............................................................................................................................2480.2520000000200
.........................................................................................................................TGTTGACTGGTGCTGCATGCGTAGC..............................................................................................................2580.2520000000020
.........................................................................................................................TGTTGACTGGTGCTGCATGCGTAGAT.............................................................................................................2680.2520000000200
.........................................................................................................TTTTACGTCGATGACTTGTTGACT...............................................................................................................................2480.2520200000000
...............................................TGAGTGAGTCTG-CGAAGCTCTCATT.......................................................................................................................................................................................2580.2520200000000
..........................................................................................................TTTACGTCGATGACTTGTTGACTGGTGC..........................................................................................................................2880.2520200000000
................................................................................................................TCGATGACTTGTTGACTGGTGCTGCA......................................................................................................................2680.2520100000010
...........................................................................................................................TTGACTGGTGCTGCATGCGT.................................................................................................................20130.2330200000010
.........................................................................................GTTATTGGG-TCCGACTTTTA..................................................................................................................................................2090.2220100000100
.....................................................................................................................GACTTGTTGACTGGTGCTG........................................................................................................................1990.2220200000000
.........................................................................................................................................ATGCGTAGAGGAGCTAAGGGC..................................................................................................2190.2220000000200
...........................................................................CTAGAGCTGCTAACGTTATTGG...............................................................................................................................................................2290.2220200000000
.............................................................................AGAGCTGCTAACGTTATTGGG-TCC..........................................................................................................................................................2490.2220200000000
...........................................................................................TATTGGG-TCCGACTTTTACGTCGA............................................................................................................................................2490.2220200000000
.......................................................................................ACGTTATTGGG-TCCGACTTT....................................................................................................................................................2090.2220200000000
....................................................................................................................TGACTTGTTGACTGGTGCTGCA......................................................................................................................2290.2220200000000
.............................................................................AGAGCTGCTAACGTTATTGGG-TCCG.........................................................................................................................................................2590.2220200000000
............................................GGTTGAGTGAGTCTG-CGAAGCT.............................................................................................................................................................................................2290.2220200000000
......................................................................................AACGTTATTGGG-TCCGACT......................................................................................................................................................1990.2220200000000
....................................................................................CTAACGTTATTGGG-TCCGACTT.....................................................................................................................................................2290.2220200000000
....................................................................................................................TGACTTGTTGACTGGTGCT.........................................................................................................................1990.2220200000000
..................................................................................................................GATGACTTGTTGACTGGTGCTGCATGC...................................................................................................................2790.2220000000200
..............................................................................................TGGG-TCCGACTTTTACGTCGATG..........................................................................................................................................2390.2220200000000
.....................................................................................................................GACTTGTTGACTGGTGCTGCATG....................................................................................................................2390.2220200000000
..............................................TTGAGTGAGTCTG-CGAAGCT.............................................................................................................................................................................................2090.2220110000000
droWil2
TGGTACGGTGCCAGCTCCCTTTCTGGCAATACGGTGTTTGACAAAGCTGGGTGAGATGA-TGGAATTGTCATTCCCAAAAGCTGCTGAAGTTATCAGA-CACGATTTTTATGTTGATGACATGTTGACTGGTGCTGGATGCGTTGAGGACCTTCTGGCAATTAAGT-CTGAATTGTCACAGGCATTGTTTAAAGCAGGATTTGATTTAACCAAATGGTTTTTAAAT--AGTTTTGAAAGCCCCGCTCCC-TTAGCASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
CGGCACGGCGCCTGCCCCGTTTTAGGCAATAAGGTGCATAACAAAACTAGGTGAGATCT-GCGAGTCATTATACCATAAAGCTTCTGACGTTACAAGG-CAAAACTTTTATGTCGATGATTTACTGACTGGTGCTGCATGCGTAAAGAACCTTCTGACAATTAAGT-CTGCAGTGTCGCCAATAATCAAAAATGCAGGTTTCGAACTAACCAAATGGTTTTCGAAT--TCTCCTGAGTTTTCTGCAACAAAGG---SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
TGGGACAGCGACTGCTCCATTCTTAGCAATTCGATGTTTGAAACATCTGAGCGACT-TGCATGCTTCCACTCATCCATCTGCTGCAA-GATCGTTAGCCCAAGATTTCTATGTTGATGACTTGTTGACAGGAGTAGATAGCGTTGAAGAATTGT-GCTTGTTAGATCGACACTTGATAGCAATTCTTCAAGCGTTTGGGTTTCCTCTCACAAAATGGTCGTCCAAT--TGTAA----------ACAACTTGCAGCASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...............TCCATTCTTAGCAATTCGATGTTT.........................................................................................................................................................................................................................24201.15231400090
....................................................................................................................................GTAGATAGCGTTGAAGAATTG.......................................................................................................2111.001100000
.........................................................................................................................TGTTGACAGGAGTAGATAGC...................................................................................................................2011.001000100
...................TTCTTAGCAATTCGATGTTTGAAAC....................................................................................................................................................................................................................2511.001000010
.........................................................................................................................................................................................................TCCTCTCACAAAATGGTCGTCCAAT--TG..........................27200.80161400020
...............TCCATTCTTAGCAATTCGATGTT..........................................................................................................................................................................................................................23200.70141200020
.........................................................................................................................................................................................................TCCTCTCACAAAATGGTCGTCCAA...............................24200.60121200000
.........................................................................................................TTCTATGTTGATGACTTGTTGACAGG.............................................................................................................................26170.5910810010
.........................................................................................................................................................................................................TCCTCTCACAAAATGGTCGTCCA................................23200.50101000000
.........................................................................................................................................................................................................TCCTCTCACAAAATGGTCGTCCAAT--............................25200.5010900010
.......................................................................................................................................................................................................TTTCCTCTCACAAAATGGTCG....................................21200.5010800002
................................................................TTCCACTCATCCATCTGCTGCAA-G.......................................................................................................................................................................2450.402200000
.........................................................................TCCATCTGCTGCAA-GATCGTTAGCCC............................................................................................................................................................2650.402000020
.........................................................................................................................................................................................................TCCTCTCACAAAATGGTCGTCCAAT--TGTA........................29200.357700000
..................................................................................................................................................................................................................AAAATGGTCGTCCAAT--TGTAA----------AC...........23200.306400200
...........................................................................................................................................................................................................CTCTCACAAAATGGTCGTCCAAT--T...........................24200.255500000
.........................................................................................................................................................................................................TCCTCTCACAAAATGGTCGT...................................20200.255400001
...............TCCATTCTTAGCAATTCGATG............................................................................................................................................................................................................................21200.255500000
..........................................................................................................................................................................................................CCTCTCACAAAATGGTCGTCC.................................21200.255300011
...........................................................................................................................................................................................................CTCTCACAAAATGGTCGTCCAAT--TGT.........................26200.255500000
........................................................................................................................................................................................................TTCCTCTCACAAAATGGTCGT...................................21200.204200101
................................................................TTCCACTCATCCATCTGCTGCAA-GATCG...................................................................................................................................................................2850.201100000
................................................................TTCCACTCATCCATCTGCTGCAA-GA......................................................................................................................................................................2550.201010000
.................................................................TCCACTCATCCATCTGCTGCAA-GATCGT..................................................................................................................................................................2850.201100000
...............TCCATTCTTAGCAATTCGATGT...........................................................................................................................................................................................................................22200.204300010
.................................................AGCGACT-TGCATGCTTCCACT.........................................................................................................................................................................................21200.204400000
............................................................................ATCTGCTGCAA-GATCGTTAGC..............................................................................................................................................................2150.201001000
.........................................................................TCCATCTGCTGCAA-GATCGTTAGCCCA...........................................................................................................................................................2750.201100000
.........................................................................................................................................................................................................TCCTCTCACAAAATGGTCGTCC.................................22200.204000040
..................................................................................................................................................................................................TTGGGTTTCCTCTCACAAAATGGTCGTC..................................28160.193200001
....................................................................ACTCATCCATCTGCTGCAA-GATC....................................................................................................................................................................2360.171100000
..........................................................................................................................................................................................................CCTCTCACAAAATGGTCGTCCAAT--............................24200.153200100
.........................................................................................................................................................................................................TCCTCTCACAAAATGGTCGTCCAAT--TGT.........................28200.153300000
............TGCTCCATTCTTAGCAATTCGATG............................................................................................................................................................................................................................24200.153300000
...GACAGCGACTGCTCCATTCTT........................................................................................................................................................................................................................................21200.153300000
..........................................................................................................................................................................................................CCTCTCACAAAATGGTCGTCCAAT--TG..........................26200.153300000
.........................................................................................................................................................................................................TCCTCTCACAAAATGGTCGTC..................................21200.153200100
.......................................................T-TGCATGCTTCCACTCATCCATC.................................................................................................................................................................................2370.141100000
.............................................................................TCTGCTGCAA-GATCGTTAGCC.............................................................................................................................................................2170.141100000
..................................................................................................................................................................................................TTGGGTTTCCTCTCACAAAATGGTCGT...................................27170.122200000
..........................................................................................................TCTATGTTGATGACTTGTTGACA...............................................................................................................................23170.122200000
...................................................................................................................................................................................................TGGGTTTCCTCTCACAAAATGGTCG....................................25170.122200000
..........................................................................................................TCTATGTTGATGACTTGTTGACAGG.............................................................................................................................25170.122200000
................CCATTCTTAGCAATTCGATGTTT.........................................................................................................................................................................................................................23200.102200000
...........................................................................................................................................................................................................CTCTCACAAAATGGTCGTC..................................19200.102000200
..........................................................................................................................................................................................................CCTCTCACAAAATGGTCGTCCAAT--T...........................25200.102200000
....................................................GACT-TGCATGCTTCCACTCAT......................................................................................................................................................................................21200.102200000
......................................................CT-TGCATGCTTCCACTCATCC....................................................................................................................................................................................21200.102200000
..................................................................................................................................................................................................................AAAATGGTCGTCCAAT--TGTAA----------A............22200.102000200
............................................................................................................................................................................................................TCTCACAAAATGGTCGTCCAAT--TGTA........................26200.102200000
.......................................................T-TGCATGCTTCCACTCATCC....................................................................................................................................................................................20200.102200000
..................................................GCGACT-TGCATGCTTCCACTCATCCA...................................................................................................................................................................................26200.102200000
...................................................CGACT-TGCATGCTTCCACTCAT......................................................................................................................................................................................22200.102200000
..................................................................................................................................................................................................................AAAATGGTCGTCCAAT--TGTAA----------ACAAC........26200.102100010
.............................................................................................................................................................................................................CTCACAAAATGGTCGTCCAAT--............................21200.102200000
..................................................GCGACT-TGCATGCTTCCACTCAT......................................................................................................................................................................................23200.102200000
..................ATTCTTAGCAATTCGATGTT..........................................................................................................................................................................................................................20200.102200000
.............GCTCCATTCTTAGCAATTCGA..............................................................................................................................................................................................................................21200.102200000
....................................................................................................AAGATTTCTATGTTGATGACTTGTT...................................................................................................................................25130.081100000
....................................................................................................AAGATTTCTATGTTGATGACTTGTTGAC................................................................................................................................28130.081100000
.......................................................................................................................................GATAGCGTTGAAGAATTGT-GC...................................................................................................21140.071000001
.................................................................................................................................................................................................TTTGGGTTTCCTCTCACAAAATGGTC.....................................26170.061000010
..................................................................................................................................................................................................TTGGGTTTCCTCTCACAAAATGGTCG....................................26170.061100000
..................................................................................................................................................................................................TTGGGTTTCCTCTCACAAAATGGTC.....................................25170.061100000
.........................................................................................................TTCTATGTTGATGACTTGTTGACA...............................................................................................................................24170.061100000
....ACAGCGACTGCTCCATTCTTC.......................................................................................................................................................................................................................................21200.051100000
..............................................................................................................................................................................................................TCACAAAATGGTCGTCCAAT--T...........................21200.051100000
...............TCCATTCTTAGCAATTCGATGTTC.........................................................................................................................................................................................................................24200.051000010
........................................................................................................................................................................................................TTCCTCTCACAAAATGGTCGTCCAAT--............................26200.051100000
..............................................................................................................................................................................................................TCACAAAATGGTCGTCCAAT--TG..........................22200.051000001
.......................................................T-TGCATGCTTCCACTCATCCA...................................................................................................................................................................................21200.051100000
......AGCGACTGCTCCATTCTTAGCAA...................................................................................................................................................................................................................................23200.051100000
..GGACAGCGACTGCTCCATTCTTAGCA....................................................................................................................................................................................................................................26200.051100000
..................ATTCTTAGCAATTCGATGTTC.........................................................................................................................................................................................................................21200.051000010
...................................................................................................................................................................................................................AAATGGTCGTCCAAT--TGTAA----------A............21200.051000100
............................................................................................................................................................................................................TCTCACAAAATGGTCGTCCAAT--TGT.........................25200.051010000
..............CTCCATTCTTAGCAATTCGATGTTT.........................................................................................................................................................................................................................25200.051000010
......AGCGACTGCTCCATTCTTAGCAAT..................................................................................................................................................................................................................................24200.051100000
.................................................AGCGACT-TGCATGCTTCCAC..........................................................................................................................................................................................20200.051100000
.............GCTCCATTCTTAGCAATTCGAT.............................................................................................................................................................................................................................22200.051100000
............TGCTCCATTCTTAGCAATTCGATGTTTC........................................................................................................................................................................................................................28200.051100000
.........................................................................................................................................................................................................TCCTCTCACAAAATGGTCG....................................19200.051100000
......AGCGACTGCTCCATTCTTAGC.....................................................................................................................................................................................................................................21200.051100000
...............................................................................................................................................................................................................CACAAAATGGTCGTCCAAT--TG..........................21200.051000010
.................CATTCTTAGCAATTCGATGTT..........................................................................................................................................................................................................................21200.051100000
................CCATTCTTAGCAATTCGATGTT..........................................................................................................................................................................................................................22200.051100000
...........CTGCTCCATTCTTAGCAATTC................................................................................................................................................................................................................................21200.051100000
...........CTGCTCCATTCTTAGCAATT.................................................................................................................................................................................................................................20200.051100000
...........................................................................................................................................................................................................CTCTCACAAAATGGTCGTCCAAT--TG..........................25200.051100000
......................................................................................................................................................................................................................TGGTCGTCCAAT--TGTAA----------ACAA.........21200.051100000
................................................................................................................................................................................................................ACAAAATGGTCGTCCAAT--TGTA........................22200.051000001
.................................................................................................................................................................................................................CAAAATGGTCGTCCAAT--TGTA........................21200.051100000
......................................................CT-TGCATGCTTCCACTCATC.....................................................................................................................................................................................20200.051100000
...........................................................................................................................................................................................................CTCTCACAAAATGGTCGTCCAAT--TGTAA----------A............29200.051100000
.........................................................TGCATGCTTCCACTCATCCA...................................................................................................................................................................................20200.051100000
.....CAGCGACTGCTCCATTCTT........................................................................................................................................................................................................................................19200.051100000
....ACAGCGACTGCTCCATTCTTG.......................................................................................................................................................................................................................................21200.051100000
..............................................................................................................................................................................................................TCACAAAATGGTCGTCCAAT--............................20200.051000100
....................................................................................................................................................................................................................AATGGTCGTCCAAT--TGTAA----------AC...........21200.051100000
..............................................................................CTGCTGCAA-GATCGTTAGCC.............................................................................................................................................................20200.051001000
............................................................................................................................................................................................................TCTCACAAAATGGTCGTCCAAT--TG..........................24200.051100000
.......................................................................................................................................................................................................TTTCCTCTCACAAAATGGTCGTCC.................................24200.051100000
............TGCTCCATTCTTAGCAATTCGATGT...........................................................................................................................................................................................................................25200.051100000
.....CAGCGACTGCTCCATTCTTAG......................................................................................................................................................................................................................................21200.051000100
........................................................................................................................................................................................................TTCCTCTCACAAAATGGTCGTCCAA...............................25200.051100000
...........................................................................................................................................................................................................CTCTCACAAAATGGTCGTCCAA...............................22200.051100000
.......................................................................................................................................................................................................TTTCCTCTCACAAAATGGTC.....................................20200.051100000
.......................................................................................................................................................................................................................GGTCGTCCAAT--TGTAA----------AC...........18200.051000100
.........................................................................................................................................................................................................TCCTCTCACAAAATGGTC.....................................18200.051100000
.......GCGACTGCTCCATTCTTAGC.....................................................................................................................................................................................................................................20200.051100000
........................................................................................................................................................................................................TTCCTCTCACAAAATGGTCGTCC.................................23200.051000010
........................................................................................................................................................................................................TTCCTCTCACAAAATGGTCGTCCAAT--TG..........................28200.051100000
.......................................................................................................................................................................................................TTTCCTCTCACAAAATGGTCGTCCAAT--TG..........................29200.051100000
droGri2
TGGAACAGCCTCAGCGCCATACTTAGCCATACGCAGCCTGCATTTTTTGGC-AAATCTGTGTCGAACTGAGTATCCAATCGGTGCTGCAGTCATTGAA-TCGTCGTTCTATGTAGATGACCTGTTATCTGGAGGTGAGGACATAGAAACTCTTCGCACAATCAAGG-ATCAAGTCACGAAAATTCTTCATCGTGGTCACTTTCCGTTATCTAAGTGGCATTCAAAT--CAAGCCCAATTTATCGAAAACG---TCGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
TGGCACTGCACCAGCCCCATTCCTGGCCATAAGGTGTTTGAAGAGGTTGAGTGAATCCG-CGAAAAATACATTCCCTCGAGCTGCTAAAGTTATTGGG-TCTGACTTTTACGTCGACGACTTGTTAACGGGTGCTGGTTGCGTGGAGGAGCTAAAGACAATTAAGT-CTGAAGTAACTCAGGTTCTTCAAAACGCTGGGTTTGAATTGAGCAAGTGGTTTTCAAAC--TCGCCTGAAGTTACTGCATCCGAGAGCASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................................................................................................................TCGACGACTTGTTAACGGGTGCTG........................................................................................................................2430.672200000
.....................................................................................................................GACTTGTTAACGGGTGCTGGTTG....................................................................................................................2330.331010000
..................................................................................TGCTAAAGTTATTGGG-TCTGACTTT....................................................................................................................................................25200.204400000
..............................................................................................TGGG-TCTGACTTTTACGTCGA............................................................................................................................................21200.153000003
........................................................................................................................TTGTTAACGGGTGCTGGTTGC...................................................................................................................2170.141010000
......................................................................................................................................................................................................................................GCCTGAAGTTACTGCATCCGAGAGC.25200.102011000
..........................................................................................................................GTTAACGGGTGCTGGTTGCGTGGAGG............................................................................................................26200.102200000
............................................................................................................................................................................................................................TCAAAC--TCGCCTGAAGTTACTGCATCC.......27200.102020000
....................................................................................................................................................................................................................................TCGCCTGAAGTTACTGCATCCGA.....23200.102020000
...........................................................................................................................................................................................................................TTCAAAC--TCGCCTGAAGTTACTGCATC........27200.102020000
.............................................................................................................................AACGGGTGCTGGTTGCGTGGA..............................................................................................................21200.051100000
...........................CATAAGGTGTTTGAAGAG...................................................................................................................................................................................................................18200.051100000
.........................................................................................................................................................................................................TGAATTGAGCAAGTGGTTTTCA.................................22200.051000010
.......................................................TCCG-CGAAAAATACATTCCCTCGAG...............................................................................................................................................................................25200.051010000
...................................................................................................................................................................................AGGTTCTTCAAAACGCTGGGTTTGAA...................................................26200.051100000
................................................................................................................................GGGTGCTGGTTGCGTGGAGGA...........................................................................................................21200.051100000
...................................................................................................................................................................................AGGTTCTTCAAAACGCTGGGTTTG.....................................................24200.051100000
............................ATAAGGTGTTTGAAGAGGTTGAGT............................................................................................................................................................................................................24200.051010000
..................................................................................................................................................................................................................CAAGTGGTTTTCAAAC--TCGCCTG.....................23200.051100000
......................................................................................................................................................................................................GTTTGAATTGAGCAAGTG........................................18200.051100000
....................................................................................................................................................................................................GGGTTTGAATTGAGCAAGTGG.......................................21200.051100000
..................................................................................................................................................................................CAGGTTCTTCAAAACGCTGGGTTTGAA...................................................27200.051100000
.......................................................................................................................................................................................................................................CCTGAAGTTACTGCATCCGAGA...22200.051010000
.................................................................................................................................................................................................................GCAAGTGGTTTTCAAAC--TCGCCT......................23200.051010000
.....................................................................................................................................................................................................................GTGGTTTTCAAAC--TCGCCTGAAGTTA...............26200.051100000
........................................................................TCCCTCGAGCTGCTAAAGTTATTGG...............................................................................................................................................................25200.051100000
.........................................................................................................................................................................................................TGAATTGAGCAAGTGGTTTTCAAAC--T...........................26200.051010000
...........................................................................................................................................GCGTGGAGGAGCTAAAGACAATT..............................................................................................23200.051010000
droBip1
TGGCACTGCACCAGCCCCATTCCTGGCCATAAGGTGTTTGAAGAGGTTGAGTGAATCTG-TGAAAAATACATTCCCTCGAGCTGCCAAAGTTATTGGG-TCCGACTTTTACGTCGACGACATGTTAACGGGTGCTGGTTGCATTGAGGAGCTAAAGACAATTAAGT-CTGAAGTAACTCAGGTTCTTCAAAACGCTGGGTTTGAATTGAGCAAGTGGTTTTCAAAC--TCGCCTGAAGTTACTGCATCCGAGAGCASizeHit CountTotal NormTotal
No Reads
droKik1
TGGTACTGGACAAGCCCCTTTTCTGGCTATTCGGTGTTTAGAAAGGTTAAGTGAATCTG-CGAAACTTTCATTCCCTAGAGCTGCCGACGTAATTGGA-TCCGATTTTTACGTCGATGACATGCTAACTGGTGCTGCATGCGTAGAGGAGCTACAGACAATCAAGT-CTGAAGTGTGTCAGGTTCTTCAAACATCAGGTTTTGAATTGACAAAGTGGTTTTCAAAC--TCACCTGAGGTCACTGCATCTGAGAGCASizeHit CountTotal NormTotal
No Reads
droFic1
TGGAACTGGCCCAGCTCCATATCTAGCGATTCGGTCTTTAAAAAGGTTGAGTGAATCTG-CCAAGCTTTCATTCCCTAGAGCTGCTGAAGTTATTGGA-TCCGACTTTTACGTCGATGATATGCTAACTGGTGCTGCATGCGTCGAGGAGCTCAGATCTATCAGGT-CTGAAGTGTCTCAGGTTCTTCAAACCGCAGGGTTTGAATTGACAAAGTGGTTTTCAAAC--TCACCTGAGGTCACCGCATCTGAGAGCASizeHit CountTotal NormTotal
No Reads
droEle1
TGGTTCTGGACCAGCCCTATTTCTAGCTATTCGGTGTTTAAGAAGGTTGAGTGAG-CTG-CAAAACTTTCATTCTCTAGAGCTTCTAAAGTTATTGGA-TCCGTCTTTTACGTCGATGATATGTTGAGTGGTGCTGAATGCGTAGATGAGCTAAAGACTATTAAGT-CTGTAGTGTCTCAGGTTCTTCAAACAGCAGGATTTGAATTAACAAAGTGGTTTTCTAAC--TCACCTGAAGTCACCGCATCTAAGAACASizeHit CountTotal NormTotal
No Reads
droRho1
TGGTACTGGACCAGCCCCGTTTTTGGCTATTCGGTGTTTAAAAAGGTTAAGTGAGTCTG-CCAAAGTTTCTTTTCCTAGAGCTGCTAAGGTTATTGGA-TCCGACTTTTATGTCGATGATATGTTGACTGGTGCTGCATGCGTAGAGGAGTTAAAGGCTATTAAGT-CTGAAGTATCTCAGGTTCTTCAAACTGCAGGTTTTGAATTGACAAAGTGGTTTTCAAAC--TCACCTGACGTTACCGCATCTGAGAGCASizeHit CountTotal NormTotal
No Reads
droBia1
--------------------------------------------GGTTAAAAGAGTCTG-CCAAACTTTGTTTTACTAGAGCTGGGTAAGTTATTGGA-TACGACCTTTATGTCAGTGACATGTTGACTGTTGCTGCCTGCATAGAGGAGTTAAAGACTTTTATGT-CTGAAGTTTCTCAGGTTCTTCAAACTGGAGGTATTGAATTGACAAAGTGGTTTTCAAAT--TCACCTGACGTCACCGCATATGAGAGAASizeHit CountTotal NormTotal
No Reads
droTak1
TGGGACTGGACCAGCCCCATTTCTGGCAATTCGGTGTTTAAAAAGGTTAAGCGAGTCTG-CCAAACTTTCTTTTCCTAGAGCTGCTGAAGTTATTGGA-TCCGACTTTTATGTCGATGACATGTTGACTGGTGCTGCATGCGTAGAGGAGTTAAAGACTATTAAGT-CTGAAGTGTCTCAGGTTCTTCAAACTGCAGGTTTTGAATTGACAAAGTGGTTTTCAAAC--TCACCTGACGTCACCGCATCTGAGAGCASizeHit CountTotal NormTotal
No Reads
droEug1
TGGAACTTTGCCAGCTCCGTTTATGGTGATCCGGTGTTTAATGCAGCTTGGAGAGATGG-CGCAAGCTAAGT-AAG-TAAGCTGCGAAAGTCATTCAG-AAAGATTTCTATGTTGACAATATGTTGACAGGCGCCGGAAGCGTTGAGAACCTGCAAAGCCTCGTG--ATGAAGTTTCTTTGATT-TGCAAGAGGCAGGTTTTGAATTGGCAAAGTGGTTTTCGAAC--TGCCCAGAGATCTCCGCATCTGAGAGCGSizeHit CountTotal NormTotal
No Reads
dm3
TGATACTAGACTAGCCCCATTTCTGCCTATTCGGTGTTTATAACTTTTGAATTCGGCAT-GAAAATTTGCATTCCCTAGAGCTGCCGACGTTATTGGA-TCCGATTTTTACGTCGATGACCTGTTAAATGGTACTGCATGCGTAAAGGAGCTAAAAACAATTAAGT-CTGAAGTGTCTCAGGTTCTTTAAAAAGCAGGATTTGAATTGACGAAGTGGTTTTCAAAC--TCACCTGAGGTCACTGCATTTGAGAGCASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
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............................................................................................................................................CGTAAAGGAGCTAAAAACAAT...............................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000
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................................................................................................................................................................................CTCAGGTTCTTTAAAAAGCAGG..........................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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..........................................................................................TTATTGGA-TCCGATTTTTACGT...............................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
...................................................................................................................................TACTGCATGCGTAAAGGAGC.........................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
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.............................................................................................TTGGA-TCCGATTTTTACGTCC.............................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
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...............................................................................................................................................................................................................................AAC--TCACCTGAGGTCACTGCA..........2121.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................GTACTGCATGCGTAAAGGAG..........................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
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...........................................CTTTTGAATTCGGCAT-GAAAAT..............................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
..........................................................................................................TTTACGTCGATGACCTGTTAAATGG.............................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................CTGCATGCGTAAAGGAGCTA.......................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................GCAGGATTTGAATTGACGAAGTGGTT.....................................2620.5010000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................ATTTTTACGTCGATGACCTGTT...................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................GATTTGAATTGACGAAGTGGC......................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.........................................................................................................................................................................................................TGAATTGACGAAGTGGTTTTCA.................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................GATTTGAATTGACGAAGTGGTT.....................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................TTTGCATTCCCTAGAGCTGCC..........................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................ATTGACGAAGTGGTTTTCAAA...............................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................GATTTGAATTGACGAAGTGG.......................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
........................................................................................................................................................................................................................GTTTTCAAAC--TCACCTGAGGT.................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................GAGCTGCCGACGTTATTGGA-.............................................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................TTTACGTCGATGACCTGTTA..................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
.........................................................................................................TTTTACGTCGATGACCTGTTA..................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................GGTTTTCAAAC--TCACCTGAGGTCA...............2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................CCTAGAGCTGCCGACGTTATT.................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
........................................................................TCCCTAGAGCTGCCGACGTT....................................................................................................................................................................2020.5010000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................ATTTGAATTGACGAAGTGGT......................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................CCCTAGAGCTGCCGACGTTATT.................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
...........................................................................CTAGAGCTGCCGACGTTATTGGA-.............................................................................................................................................................2320.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................TTTTCAAAC--TCACCTGAGGT.................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................TTCCCTAGAGCTGCCGACGTTA...................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...........................................................................................................TTACGTCGATGACCTGTTAA.................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
................................................................................................................................................................TTAAGT-CTGAAGTGTCTCAGGAAA.......................................................................2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
...................................................................................................................................................................................................................AAGTGGTTTTCAAAC--TCACCTGAGGTC................2720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................TGCATTCCCTAGAGCTGCCGA........................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................TTTGAATTGACGAAGTGGTA.....................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................ATTTTTACGTCGATGACCTGT....................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................GACGAAGTGGTTTTCAAAC--TCACCTGA....................2720.5010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................TGGTTTTCAAAC--TCACCTGAGGT.................2320.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............................................................................AGCTGCCGACGTTATTGGA-T............................................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................TGAATTGACGAAGTGGTTTTC..................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
droSim2
--------------------------CTATTCGGTGTTTAAAGAGGTTGAGTGAATCTG-CTAAATGTTCATTCCCTAGAGCTGCCGACGTGATTGGA-TCCGATTTTTACGTCGATGACATGTTAACTGGTGCTGCATGCGTAGAGGAGCTAAAGACAATTAAGT-CTGAAGTGTCTCAGGTTCTTCAAACAGCAGGTTTTGAATTGACAAAGTGGTTTTCAAAC--TCACCTGAGGTCACTGCATCTGAGAGCASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................................................................................................................................TGCTGCATGCGTAGAGG............................................................................................................1730.33100000001000000000
droSec2
CGGCACCAAACCAGCCTCCTTCTTGTCCGTAAGGGCTATGCAGCAGTTGTCAATCGATG-AGCAGGCATCGTTTCCCATTGGATCAGAAATCCTTCGG-CGTGATTTCTACGTGGATGATCTTATCTCCGGCTCAGGCACGGTAAAGGATGCTATCAGCATAATGC-AACAGACGGCTGGCATTCTTGCGAAGGGCAAGCTCAAGCTAAGGAAATGGTGCTCTAACATTCCGCTGGAGGGTGTGCCGCCGAGGACASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.........................................AGCAGTTGTCAATCGATG-AGCAG...............................................................................................................................................................................................23202.705400540
.........................................AGCAGTTGTCAATCGATG-AGCAGGC.............................................................................................................................................................................................25202.4549330160
.........................................AGCAGTTGTCAATCGATG-AGCAGG..............................................................................................................................................................................................24202.354747000
.....................................................................................................................................................................C-AACAGACGGCTGGCATTCTTGCGA.................................................................25182.1138142193
...............................................................................................................GTGGATGATCTTATCTCCGGCTCA.........................................................................................................................24200.851712050
.........................................AGCAGTTGTCAATCGATG-AGCAGGCA............................................................................................................................................................................................26200.65139400
.....................................................................................................................................................................C-AACAGACGGCTGGCATTCTTGC...................................................................23180.56107021
...............................................TGTCAATCGATG-AGCAGGCATCGTT.......................................................................................................................................................................................25200.3575020
...............................................................................................................GTGGATGATCTTATCTCCGGCTCAG........................................................................................................................25200.3066000
.........................................AGCAGTTGTCAATCGATG-AGCA................................................................................................................................................................................................22200.3063003
.....................................................................................................................................................................C-AACAGACGGCTGGCATTCTTG....................................................................22180.2855000
.....................................................................................................................................................................C-AACAGACGGCTGGCATTCTTGCG..................................................................24180.2854010
...............................................................................................................................................................................................AGGGCAAGCTCAAGCTAAGGAAATGG.......................................26200.2550023
...............................................................................................................GTGGATGATCTTATCTCCGGCTCAGGC......................................................................................................................27200.1533000
...............................................................................................................GTGGATGATCTTATCTCCGGCT...........................................................................................................................22200.1533000
....................................................................TCGTTTCCCATTGGATCAGAAATCC...................................................................................................................................................................25200.1533000
.....................................................................................................................................................................C-AACAGACGGCTGGCATTCTTGCGTT................................................................26180.1121100
.......................................................................................................................................................................AACAGACGGCTGGCATTCTTGC...................................................................22180.1122000
...................................................................................................................................................................TGC-AACAGACGGCTGGCATTCTT.....................................................................23180.1121010
.....................................................................................................................................................................C-AACAGACGGCTGGCATTCTTGT...................................................................23180.1122000
.....................................................................................................................................................................C-AACAGACGGCTGGCATTCTTGCGAC................................................................26180.1122000
....................................................................................................................................................................................................AAGCTCAAGCTAAGGAAATGGTGCTC..................................26200.1021010
............AGCCTCCTTCTTGTCCGTAAGGGCTA..........................................................................................................................................................................................................................26200.1020020
...............................................................................................................GTGGATGATCTTATCTCCGGCTCAGT.......................................................................................................................26200.1022000
.........................................AGCAGTTGTCAATCGATG-AGCAGGCT............................................................................................................................................................................................26200.1021010
................................................................................................................TGGATGATCTTATCTCCGGCTCA.........................................................................................................................23200.1022000
..........................................GCAGTTGTCAATCGATG-AGCAGG..............................................................................................................................................................................................23200.1022000
...............................................................................................................................................................................................AGGGCAAGCTCAAGCTAAGGAAATG........................................25200.1021010
.....................................................................................................................................................................C-AACAGACGGCTGGCATTCTTGCGAAG...............................................................27170.0611000
.....................................................................................................................................................................C-AACAGACGGCTGGCATTCTTGCGAA................................................................26170.0610010
...................................................................................................................................................................TGC-AACAGACGGCTGGCATTCTTGC...................................................................25180.0611000
...................................................................................................................................................................TGC-AACAGACGGCTGGCATTCTTG....................................................................24180.0611000
...................................................................................................................................................................TGC-AACAGACGGCTGGCATTCTTGA...................................................................25180.0610010
.....................................................................................................................................................................C-AACAGACGGCTGGCATTCTTGCGT.................................................................25180.0611000
..............................................................................................................................................................CATAATGC-AACAGACGGCTGGCATTCT......................................................................27180.0611000
.......................................................................................................................................................................AACAGACGGCTGGCATTCTTGCGA.................................................................24180.0611000
.....................................................................................................................................................................C-AACAGACGGCTGGCATTCTTGCGATT...............................................................27180.0611000
.....................................................................................................................................................................C-AACAGACGGCTGGCATTCTT.....................................................................21180.0610001
.....................................................................................................................................................................C-AACAGACGGCTGGCATTCTTGCACT................................................................26180.0611000
.......................................................................................................................................................................AACAGACGGCTGGCATTCTTG....................................................................21180.0611000
.......................................................................TTTCCCATTGGATCAGAAATCCTTCGG-C............................................................................................................................................................28200.0511000
...........................................................................................................CTACGTGGATGATCTTATCTC................................................................................................................................21200.0510010
....................................................................TCGTTTCCCATTGGATCAGAAATCCT..................................................................................................................................................................26200.0511000
.................................................................................................................GGATGATCTTATCTCCGGCT...........................................................................................................................20200.0511000
....................................................................TCGTTTCCCATTGGATCAGAAATCCTTCG...............................................................................................................................................................29200.0511000
.....................................................................................................TGATTTCTACGTGGATGATCTTATCT.................................................................................................................................26200.0511000
...............................................................................................................GTGGATGATCTTATCTCCGG.............................................................................................................................20200.0511000
.........................................................TG-AGCAGGCATCGTTTCCCAT.................................................................................................................................................................................21200.0511000
...............................................................................................................GTGGATGATCTTATCTCCGGCTCAGGCAC....................................................................................................................29200.0511000
.............................................................................................................................................................................................GAAGGGCAAGCTCAAGCTAAGGA............................................23200.0511000
...............................................................................................................................................................................................AGGGCAAGCTCAAGCTAAGGAA...........................................22200.0511000
........................................................ATG-AGCAGGCATCGTTTCCCA..................................................................................................................................................................................21200.0510100
................TCCTTCTTGTCCGTAAGGGCTAT.........................................................................................................................................................................................................................23200.0511000
..............................................................................TTGGATCAGAAATCCTTCGG-CGTGAT.......................................................................................................................................................26200.0510010
....................................................................TCGTTTCCCATTGGATCAGAAATCCTT.................................................................................................................................................................27200.0510001
..............................................................................................................................TCCGGCTCAGGCACGGTAAAGGATGC........................................................................................................26200.0510010
.........................................AGCAGTTGTCAATCGATG-AG..................................................................................................................................................................................................20200.0511000
...............................................................................................................GTGGATGATCTTATCTCCGGCTCT.........................................................................................................................24200.0511000
.............................................................................................................................................................................................GAAGGGCAAGCTCAAGCTAAGGAAATG........................................27200.0511000
.......................................................................................................................................................CTATCAGCATAATGC-AACAGACGGC...............................................................................25200.0511000
............................................AGTTGTCAATCGATG-AGCAGGCATC..........................................................................................................................................................................................25200.0511000
...................................................................ATCGTTTCCCATTGGATCAGAAATCCTT.................................................................................................................................................................28200.0511000
..........................................................................................................................................ACGGTAAAGGATGCTATCAGCATAATG...........................................................................................27200.0511000
...............................................................................................................................................................................................AGGGCAAGCTCAAGCTAAGGAAATGGT......................................27200.0511000
......................................................................................................................................................GCTATCAGCATAATGC-AACAGACGGC...............................................................................26200.0511000
...............................................................................................................GTGGATGATCTTATCTCCGGCTCAT........................................................................................................................25200.0511000
........................................................................................................................................................................................................TCAAGCTAAGGAAATGGTGCTCTA................................24200.0510010
................TCCTTCTTGTCCGTAAGGGCTATGCT......................................................................................................................................................................................................................26200.0511000
.........................................AGCAGTTGTCAATCGATG-AGCT................................................................................................................................................................................................22200.0510010
...........................................................................................................................................CGGTAAAGGATGCTATCAGCATAATGC-.........................................................................................27200.0510010
................................................................................................................................................................................................GGGCAAGCTCAAGCTAAGGAAATGG.......................................25200.0511000
...............................................................................TGGATCAGAAATCCTTCGG-CGTGATTT.....................................................................................................................................................27200.0510010
.........................................AGCAGTTGTCAATCGATG-AGC.................................................................................................................................................................................................21200.0510100
............................................AGTTGTCAATCGATG-AGCAGGC.............................................................................................................................................................................................22200.0511000
..............................................TTGTCAATCGATG-AGCAGGCAT...........................................................................................................................................................................................22200.0510001
...............................................................................................................................................................................................AGGGCAAGCTCAAGCTAAGG.............................................20200.0511000
................................................................................................................................................................................CTGGCATTCTTGCGAAGGGCAAGCTCA.....................................................27200.0511000
.........................................................................................................TTCTACGTGGATGATCTTATCTCCGGC............................................................................................................................27200.0511000
..............................AAGGGCTATGCAGCAGTTGTC.............................................................................................................................................................................................................21200.0510001
..............................................................................................................................................................CATAATGC-AACAGACGGCTGGCATT........................................................................25200.0511000
..........................................................................................................................................................................AGACGGCTGGCATTCTTGCGAAGGGC............................................................26200.0510001
.....................................................................................................................................................................C-AACAGACGGCTGGCATTCC......................................................................20200.0511000
...................................................................ATCGTTTCCCATTGGATCAGAAATCC...................................................................................................................................................................26200.0511000
.............................................................................ATTGGATCAGAAATCCTTCGG-CGTG.........................................................................................................................................................25200.0510001
................TCCTTCTTGTCCGTAAGGGCT...........................................................................................................................................................................................................................21200.0510001
...............................................................................................................GTGGATGATCTTATCTCCGGCTCAGGT......................................................................................................................27200.0511000
................TCCTTCTTGTCCGTAAGGGCTATG........................................................................................................................................................................................................................24200.0511000
.....................................................................................................................................................TGCTATCAGCATAATGC-AACAGACGGC...............................................................................27200.0511000
...................................................................................................................................................................................................CAAGCTCAAGCTAAGGAAATG........................................21200.0511000
droYak3
TGGTACTGGACCAGCCCCATTTCTGGCTATTCGGTGTTTAAAGAGGTTGAGTGAATCTG-CTAAATTTTCATTTCCTAGAGCAGCCGACGTAATTGGA-TCCGATTTTTACGTCGATGACATGTTAACTGGTGCTGCATGCGTAGAGGAGCTAAAGACAATTAAGT-CTGAAGTGTCTCAGGTTCTTCAAACAGCAGGTTTTGAATTGACAAAGTGGTTTTCAAAC--TCACCTGAGGTCACTGCATCTGAGAGCASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
......................................................ATCTG-CTAAATTTTCATTTCCTAGAGCA.............................................................................................................................................................................2811.00101000000000
.....................................................................................................................................................................................................................GTGGTTTTCAAAC--TCACCTGAGGT.................24200.7014000000000014
.........................................................................................................................TGTTAACTGGTGCTGCATGCGTAGAG.............................................................................................................26200.10202000000000
.........................................................................................................................TGTTAACTGGTGCTGCATGCGTAGAGG............................................................................................................27200.10202000000000
....................................................................................................................TGACATGTTAACTGGTGCTGCAT.....................................................................................................................23200.10202000000000
.........................................................................................................................................................................................................TGAATTGACAAAGTGGTTTTCAAAC--T...........................26200.10202000000000
............................................................................................................TACGTCGATGACATGTTAACTGGTGC..........................................................................................................................26200.10200200000000
.............................................................................................................................................................................TGTCTCAGGTTCTTCAAACAGCAGGT.........................................................26200.10200000000002
......TGGACCAGCCCCATTTCTGGCTATTCGG..............................................................................................................................................................................................................................28200.05101000000000
...............................................................................................................GTCGATGACATGTTAACTGGTGCTGCA......................................................................................................................27200.05101000000000
.................................................................................................................................................................TAAGT-CTGAAGTGTCTCAGGTTCTTCA...................................................................27200.05101000000000
....................TTCTGGCTATTCGGTGTTTAAAGAG...................................................................................................................................................................................................................25200.05100000010000
.....................TCTGGCTATTCGGTGTTTAAAGAGG..................................................................................................................................................................................................................25200.05101000000000
............................................................................................................................TAACTGGTGCTGCATGCGTAGAGGA...........................................................................................................25200.05100100000000
................................GGTGTTTAAAGAGGTTGAGTGA..........................................................................................................................................................................................................22200.05101000000000
.................................................................................................................................................AGGAGCTAAAGACAATTAAGT-CTGAAG...................................................................................27200.05101000000000
..............................TCGGTGTTTAAAGAGGTTGAGTG...........................................................................................................................................................................................................23200.05100000010000
.......................TGGCTATTCGGTGTTTAAAGAGG..................................................................................................................................................................................................................23200.05101000000000
...................TTTCTGGCTATTCGGTGTTTAAAGAGG..................................................................................................................................................................................................................27200.05101000000000
......................................................................................................................................................................................................................................ACCTGAGGTCACTGCATCTGAG....22200.05101000000000
.......................................................................................................................................................................CTGAAGTGTCTCAGGTTCTTCAAACAG..............................................................27200.05101000000000
................................................................................................................................................................................CTCAGGTTCTTCAAACAGCAGGT.........................................................23200.05101000000000
....................TTCTGGCTATTCGGTGTTTAAAGAGGT.................................................................................................................................................................................................................27200.05100100000000
.........................................................................................................................................................................................TTCAAACAGCAGGTTTTGAATTGACA.............................................26200.05100100000000
..........................................................................................................................................................................................................GAATTGACAAAGTGGTTTTCAAAC--T...........................25200.05101000000000
..........................................................................................................TTTACGTCGATGACATGTTAACTGGTGC..........................................................................................................................28200.05100100000000
........................................................................................................................................CATGCGTAGAGGAGCTAAAGACAAT...............................................................................................25200.05101000000000
..............................................................................................................................................TAGAGGAGCTAAAGACAATTAAGT-CT.......................................................................................26200.05101000000000
............................................................................................................................................................................................................................TCAAAC--TCACCTGAGGTCACTGCAT.........25200.05101000000000
...........................................................................................................................................................................................................................TTCAAAC--TCACCTGAGGTCACTGCA..........25200.05101000000000
TGGTACTGGACCAGCCCCATTTCTGG......................................................................................................................................................................................................................................26200.05101000000000
droEre2
TGGTACTGGACCAGCCCCATTGCTGGCTATTCGGTGTTTTAAAAGGGTGAGTGAATCTG-CAAGATTTTCATTTCCTAGAGCTGCCGACTTAATTGGA-TCAGATTTTTACGTCGATGACATGTTAACTGGTGCTGCATGCGTAAAGGAGCTAATGACAATGTAGT-CTGAAGTGTCTCAGATTCTTCAAGCAGCA-GTTTTGAATTGACAAAGTGGTTTTTAAAC--TCACCTGAGATCACTGCATTTGAGAGCASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 06/08/2015 at 03:17 PM