ID:

dpe_788

 Coordinate:

scaffold_15:277655-277805 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-12.6 -12.6 -12.3 -12.3

Flybase annnotation

exon [dper_GLEANR_18147:7]; CDS [Dper\GL16491-cds]; intron [Dper\GL16491-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------#############-------------------------------------
GCCCTCCCCTTCCCTTTGATCATCGAATAAGAAGTCTGCTGCCAGTCCAATGGGTGCAATGTATTTTTTGTTGCGTGAGAAACATTTTATTTATTACAAAACGTCAACTGCGGGAACACCATCTTGTCTTGTATAGTTTTTAGTCATACGTAGAGTAGATTATGATACTAGTTCTATGTAGGAATTGTTGTTATTTTGCAGAATAATACAATAATACAATGTGTATGTGTGTATGTCAAATAATCTTTCGT
****************************************************************************************........................((((((..((((..((((((((...........))))).)))..))))..)).......))))**************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 M021
embryo
 V057
head
 V111
male body		 V042
embryo
 V050
head
...................................................................................................................................................................................................................TAATACAATGTGTATGTGTGT................... 21 0 1 3.00 3 0 0 3 0 0 0
........................................................................................ATTTATTACAAAACGTCAACTGCGGGA........................................................................................................................................ 27 0 1 3.00 3 0 3 0 0 0 0
..........................................................................................................................................................GTAGATTATGATACTAGTTCT............................................................................ 21 0 1 2.00 2 0 2 0 0 0 0
.........................................................................................................................................TTTTAGTCATACGTAGAGTA.............................................................................................. 20 0 1 2.00 2 0 2 0 0 0 0
................................................................................................................................................................TATGATACTAGTTCTATGTAG...................................................................... 21 0 1 1.00 1 1 0 0 0 0 0
.......................................................................................................................................GTTTTTAGTCATACGTAGAG................................................................................................ 20 0 1 1.00 1 1 0 0 0 0 0
....................................................................................................................................................................ATACTAGTTCTATGTAGGAATA................................................................. 22 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................................CTGCGGGAACACCATCTTGTC........................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0
..................................................................................................................................GTATAGGTTTTAGTCATAAGTATA................................................................................................. 24 3 1 1.00 1 0 0 0 0 1 0
..................................................................................................................................GTATAGTTTTTAGTCATACGTAGA................................................................................................. 24 0 1 1.00 1 0 0 0 0 1 0
..................................................................................................................................................................................TAGGAATTGTTGTTATTTTGC.................................................... 21 0 1 1.00 1 1 0 0 0 0 0
.........................................................................................................................................................................................................................AATGTGTATGTGTGTATGTC.............. 20 0 1 1.00 1 1 0 0 0 0 0
.................................................................................................................................................ATACGTAGAGTAGATTATGAT..................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0
.................................................................................................................................................ATACGTAGAGTAGATTATGA...................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0
................................................................................................CAAAACGTCAACTGCGGGAA....................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0
...................................................................................................................................................ACGTAGAGTAGATTATGATAC................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0
..........................................................................................................................................................................GTTCTATGTAGGAATTGTTGT............................................................ 21 0 1 1.00 1 1 0 0 0 0 0
........................................................................................................................................................................................................................CAATGTGTATGTGTGTATTT............... 20 1 1 1.00 1 0 0 0 1 0 0
............................................................................................................................................TAGTCATACGTAGAGTAGATT.......................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0
.....................................................................................................CGTCAACTGCGGGAACACCAT................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0
................................................................................................................................TTGTATAGTTTTTAGTCATAC...................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0
....................................................................................TTTTATTTATTACAAAACGTC.................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0
..............................................................ATTTTTTGTTGCGTGAGAAAC........................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0
....................................................................................................................................................................................GGAATTGTTGTTATTTTGC.................................................... 19 0 1 1.00 1 1 0 0 0 0 0
..........................................................................................................ACTGCGGGAACACCATCTTGT............................................................................................................................ 21 0 1 1.00 1 0 0 1 0 0 0
....................................................................................................................................................................ATACTAGTTCTATGTAGGAAA.................................................................. 21 1 1 1.00 1 1 0 0 0 0 0
...............................................................................................................GGAAGCATCATCTTGTCTTGT....................................................................................................................... 21 3 6 0.17 1 0 0 0 0 0 1
...............................................................................................................................................................................................TATTTTGCAGATTAGTGCAATA...................................... 22 3 7 0.14 1 0 0 0 1 0 0

Anti-sense strand reads

CGGGAGGGGAAGGGAAACTAGTAGCTTATTCTTCAGACGACGGTCAGGTTACCCACGTTACATAAAAAACAACGCACTCTTTGTAAAATAAATAATGTTTTGCAGTTGACGCCCTTGTGGTAGAACAGAACATATCAAAAATCAGTATGCATCTCATCTAATACTATGATCAAGATACATCCTTAACAACAATAAAACGTCTTATTATGTTATTATGTTACACATACACACATACAGTTTATTAGAAAGCA
****************************************************************************........................((((((..((((..((((((((...........))))).)))..))))..)).......))))**************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 M021
embryo
 V111
male body
...................................................................................................................................................................................................AACGTCTTATTATGTTATTA.................................... 20 0 1 3.00 3 0 3 0
.........................................................................................................................................................................TCAAGATACATCCTTAACAACAA........................................................... 23 0 1 3.00 3 0 3 0
..................................................................................................TTTGCAGTTGACGCCCTTGTG.................................................................................................................................... 21 0 1 2.00 2 2 0 0
...................................................................................................................................................................................................AACGTCTTATTATGTTATTATG.................................. 22 0 1 1.00 1 1 0 0
...............................................................................................................................................................................TACATCCTTAACAACAATAAAACGTCTTA............................................... 29 0 1 1.00 1 1 0 0
..........................................................................................................TGACGCCCTTGTGGTAGAACA............................................................................................................................ 21 0 1 1.00 1 1 0 0
...................................................................................................................................ATATCAAAAATCAGTATGCAT................................................................................................... 21 0 1 1.00 1 0 1 0
.................................................................................................................................................TATGCATCTCATCTAATACTA..................................................................................... 21 0 1 1.00 1 1 0 0
........................................................................................................GTTGACGCCCTTGTGGTAGA............................................................................................................................... 20 0 1 1.00 1 1 0 0
...........................................................................................ATAATGTTTTGCAGTTGAC............................................................................................................................................. 19 0 1 1.00 1 1 0 0
..............................................................................................................................................................TAATACTATGATCAAGATACATCCTT................................................................... 26 0 1 1.00 1 0 1 0
......................................................................................................AAGTTGACGCCCTTGTGGTAGA............................................................................................................................... 22 1 1 1.00 1 1 0 0
................................................................................................................................................................ATACTATGATCAAGATACATCCT.................................................................... 23 0 1 1.00 1 0 1 0
...................................................................................................TTGCAGTTGACGCCCTTGTG.................................................................................................................................... 20 0 1 1.00 1 0 0 1
............................................................................................................................................TTCAGTATGCATCTCATCTAA.......................................................................................... 21 1 1 1.00 1 1 0 0
........................................................................................................GTTGACGCCCTTGTGGTAGAA.............................................................................................................................. 21 0 1 1.00 1 1 0 0
...............................................................................................TGTTTTGCAGTTGACGCCCT........................................................................................................................................ 20 0 1 1.00 1 1 0 0
.....................................................................................................GCAGTTGACGCCCTTGTGGT.................................................................................................................................. 20 0 1 1.00 1 1 0 0
.........................................................................................................TTGACGCCCTTGTGGTAGA............................................................................................................................... 19 0 1 1.00 1 1 0 0
...............................................................................................TGTTTTGCAGTTGACGCCCTT....................................................................................................................................... 21 0 1 1.00 1 0 0 1
.............................................................................................................................................................................GATACATCCTTAACAACAATA......................................................... 21 0 1 1.00 1 1 0 0
..............................................................................................ATGTTTTGCAGTTGACGCCCTT....................................................................................................................................... 22 0 1 1.00 1 0 0 1
......................................................................................................................................TCAAAAATCAGTATGCATC.................................................................................................. 19 0 1 1.00 1 0 1 0
........................................................................................................................................................................................................................................CACAGGTGATTAGAAAGCA 19 3 20 0.05 1 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_15:277605-277855 - dpe_788 GCC------CTCCCCTTCCCTTTGATCATCGAATAAGAAGTCTGCTGCCAGTCCAATGGGTG-CAATGTATTTTTTGTTGCGT--GAGAAA---CATTTTATTTATTACAAAAC-------------------------GTCAACTG---CGGGAA--------C---------------AC--------CATCTTGT---CTTGTATA-GTTTTT-------AGTCATACGTAGAGTAGAT--------TATG-ATACTAGTTCTATGTAGGAATTGTTGTTATTTTGCAGA-ATAATACAA------------TAATACAAT----GTG-TATGTGTGTATGTCAAATAATCT--------T-------T-------------------------CGT-------
dp5 XL_group1a:7922470-7922726 - GCCCCCGCCCTCCCCTTCGCATAGATCATCGAATAAGAAGTCTGCTGCCAGTCCAATGGGTC-CAATGTGTTTTTTGTTGTGT--GAGAAA---CATTTTATTTATTACAAAAC-------------------------GTCAACTG---CGGGAA--------C---------------AC--------CATCTTGT---CTTGTATA-GTTTTT-------AGTCATACGTAGAGTAGAT--------TATG-ATACTAGTTCTATGTAGGAATTGTTGTTATTTTGCAGA-ATAATACAA------------TAATACAAT----GTG-TATGTGTGTATGTACAATATTCT--------T-------T-------------------------CGT-------
droMoj3 scaffold_6328:403174-403310 - ATA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTTTAGCATATATATATAGAGG----ATATATAATG--TAAATATAA----TATGTGTAAGATCTATTACGAACATGCCG--ATTATATAA------------T--------CTAGTTGTTATATATATATATCAAATAAATGTATGTAA--------------AA-C---------AAAATCTTTGT-------
droGri2 scaffold_14853:944205-944279 + TAT--------------------C----------------------------------------------------------------------------ATTTGTTATAACAATTACAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA-------------TAT--------ATATATA---TATACATATAT---------GTATGTATGT-------TT-TTAA-A---------TAAATGTGTGT-------
droAna3 scaffold_13117:3935454-3935531 - TA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GT---TTTA-TTAGGAATTGTTGTTAT--TGCAAAAATAATACAA------------T--------AAGCTTG-TATGTGTATATGTACAATAAATGTGTAGA----------------------------------------------
droBip1 scf7180000396383:444267-444424 + AT---------------------------------------------------------------------------------------------AATTAATTTATTAAATA--TTATTA-----------------------AAAG-------TA----------------------------------CATCC---TTTTCTTTATACCATTTT-------AGTCATAGTTT----AATTTTAAA----AAC-AAAATAT-TTTA-TTAGGAATTGTTGTTAT--TGCAGAAATAATACAA------------T--------AAGCTTG-TATGTGTATATGTACAATAAATGTGCGGA----------------------------------------------
droKik1 scf7180000302544:739121-739205 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGTTGTTAT--TGCAGA-ATACAAAA--TA----ATACA-------------------AAAAATTGTGTACAATAAATGTAGATATTA-------TCCTTAGTG---------CCTGT---GTCTGCTAT-
droFic1 scf7180000454050:935569-935824 - TCC----------------GTTTTAGCATCGAATAAGAAGTCT---GCCAGTCAAATTCTTATCATTACGAT------TACAA-AGGGAAAATCCGATTAATTTATTACAAAATTTAATA------TACATGGACAATCGCCAGCAGT--------------------------------CCCAAAAA--C---A---CTT--TTTATAC--ATTT-------AGTCATAGTTT----AAAATTAGTG--TATGTGTACTGTTTATCTGTAGGAATTGTTGTTAT--TGCAGA-ATAATACAAATT----ATGTT-------------------TGTGCATATGTACAATAAGTTTAGAGGTTT-------CTCT----------------------CGG-------
droEle1 scf7180000490546:892917-892990 + T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTATTTATGTATAGGAATTG---TTAT--TGCAGA-ATAATACAAATT----ATGTA-------------------TGTGCATATGTACAATAAATTTAGA------------------------------------------------
droRho1 scf7180000779914:417374-417655 + TC--------------------TTAGCATCGAATAAGAAGTCT---GCCAGTCAAATTCTTATCATTACGAT------TACAAAAGGGGAAATCCGATTAATTTATTGCAAAATTTTG--------TGTATGTAAACGCGCCAGGAGT-------AGTCCTCCTCCC------CCTTGT-CCCAAAAAATC---A---ATT--TTTTTAC--CTTT-------AGTCATAGTGT----AAATTTACTATATATGTTTACTGTTTATGTTTAGGAATTGTTGTTAT--TGCAGA-ATAATACAAATT----ATGTA-------------------TGTGCATATGTACAATAAATTTGGATGTTT-------TCTTTAA-C---------TGAAT---CGT-------
droBia1 scf7180000298389:692633-692708 - TA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTT---------------------T--TGGAG--------GATGTT----ATGTT-------------------TGCGCAAAAATACAACAAT-TTAAATGTTT-------TTTTTAA-G---------TCAAT---CTTTGGAGTG
droTak1 scf7180000413998:85350-85640 - TT--------------------TTAGCATCGAATAAGAAGTCT---GCCAGTCAAATTCTTATCATTACGAT------TACGA--GGGGAAATCCGATTAATTTATTAAACAAATTATTA------TATAAATACACTCGCCAGGAGA-------AGACCTCCTCCCCCCTTCCCTTGTCCCCAAAAAAAC---C---TTT--TTTTTAC--ATTT-------AGTCATAGAGT----AAAGTTACTG--TATCTGTACTGTTTACGTGTAGGAATTGTTGTTAT--TGCAGA-ATAATACAAATT----ATGTA-------------------TGTGCATATGTACAATAAATTTAAATGTTT-------TCTTTT---TTCTTCAACTGGAT-------------
droEug1 scf7180000409110:1443499-1443658 - CTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT--TTTATAC--ATTT-------AGTCATAGTGT----AAAATTACCA-ATATCTGTACTGTTTACGTGTAGGAATTGTTGTTAT--TGCAGA-ATAATACAAATTGTGTATGTA-------------------TGTGCATATGTACAATAAATTTAAATGTTTAAATGTTTCTTTT---TTGTTCAACTCAAT---CGC-------
dm3 chrX:12989560-12989816 - TT--------------------TTAGCATCGAATAAGAAGTCT---GCCAGTCAAATTCTTATCATTACGATT-----TACGA--GGGGAAATCCGATTAATTTATTACAAAATTTATTAGA----TATATGTACACTCGTCAGGGGT------TATACCTCTAT---------------CC-------------AAACTT--TTTATAC--ATTT-------AGTCATAGTGT----ACAACTACTG--TATGTGTACTGCTTACGTGTAGGAATTGTTGTTAT--TGCAGA-ATAAAACAAATT----ATGAA-------------------TGTGCATATGTACAATAAACATCAATGTTC-------TCTT--------------------------------
droSim2 x:12338385-12338470 - T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTTTACGTGTAGGAATTGTTGTTAT--TGCAGA-ATAAAACAAATT----ATGAA-------------------TGTGCATATGTACAATAAACATCAAGGTTT-------TCTT--------------------------------
droSec2 scaffold_21:734198-734283 - T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTTTACGTGTAGGAATTGTTGTTAT--TGCAGA-ATAAAACAAATT----ATGAA-------------------TGTGCATATGTACAATAAACATCAATGTTT-------TCTT--------------------------------
droYak3 X:7264971-7265260 - TGC------CAGCACATCAGTTTTAGCATCGAATAAGAAGTCT---GCCAGTCAAATTCTTATCATTACGAT------TACGA--GGGGAAATCCGATTAATTTATTACAAAATTTATTAGCTATATGTATGTACACTCGTCAGGTGTTAAGGTTAACCCTCTAC---------------CC--------CAA-----CTT--TTTTTAC--ATTT-------AGTCATAGTGT----ACAACTACTG--TATGTGTACTGTTTACGTGTAGGCATTGTTGTTAT-TTGCAGA-ATAAAACAAATT----ATGAA-------------------TGTGCATATGTACAATAACTTGCAATGTTT-------TCTTTAA-T---------TT------TGT-------
droEre2 scaffold_4690:13881718-13881945 + C--------------------------ATCGAATAAGAAGTCT---GCCAGTCAAATTCTTATCATTACGAT------TACGA--GGGGAAATCCGATTAATTTATTACAAAATTTCTTAGG----CATA-GTACAC--GTCA----------------------------------------------------AAA-CT--TTTTTAC--ATTT-------AGTCACAGTGT----ACAACTACTG--TGTATGTACTGTTTACGTATAGGAATTGTTGTTAT--TGCAGA-ATAAAACAAATT----ATAAA-------------------TGTGCATATGTACAATAAACTGCAATGTTT-------TCCT--------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
GCC------CTCCCCTTCCCTTTGATCATCGAATAAGAAGTCTGCTGCCAGTCCAATGGGTG-CAATGTATTTTTTGTTGCGT--GAGAAA---CATTTTATTTATTACAAAAC-------------------------GTCAACTG---CGGGAA--------C---------------AC--------CATCTTGT---CTTGTATA-GTTTTT-------AGTCATACGTAGAGTAGAT--------TATG-ATACTAGTTCTATGTAGGAATTGTTGTTATTTTGCAGA-ATAATACAA------------TAATACAAT----GTG-TATGTGTGTATGTCAAATAATCT--------T-------T-------------------------CGT-------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...........................................................................................................................................................................................................................................................................................................................TAATACAAT----GTG-TATGTGTGT..................................................................2113.003000030
....................................................................................................ATTTATTACAAAAC-------------------------GTCAACTG---CGGGA............................................................................................................................................................................................................................................................2713.003300000
............................................................................................................................................................................................................................................GTAGAT--------TATG-ATACTAGTTCT.............................................................................................................................................2112.002200000
....................................................................................................................................................................................................................TTTT-------AGTCATACGTAGAGTA........................................................................................................................................................................2012.002200000
..........................................................................................................................................................................................................................................................TATG-ATACTAGTTCTATGTAG.......................................................................................................................................2111.001010000
..................................................................................................................................................................................................................GTTTTT-------AGTCATACGTAGAG..........................................................................................................................................................................2011.001010000
...............................................................................................................................................................................................................................................................ATACTAGTTCTATGTAGGAATA..................................................................................................................................2211.001010000
................................................................................................................................................CTG---CGGGAA--------C---------------AC--------CATCTTGT---C.............................................................................................................................................................................................................2111.001010000
............................................................................................................................................................................................................GTATA-GTTTTT-------AGTCATACGTAGA...........................................................................................................................................................................2411.001001000
.............................................................................................................................................................................................................................................................................TAGGAATTGTTGTTATTTTGC.....................................................................................................................2111.001010000
.................................................................................................................................................................................................................................................................................................................................AAT----GTG-TATGTGTGTATGTC.............................................................2011.001010000
...................................................................................................................................................................................................................................ATACGTAGAGTAGAT--------TATG-AT......................................................................................................................................................2111.001010000
...................................................................................................................................................................................................................................ATACGTAGAGTAGAT--------TATG-A.......................................................................................................................................................2011.001010000
............................................................................................................CAAAAC-------------------------GTCAACTG---CGGGAA--------...................................................................................................................................................................................................................................................2011.001010000
.....................................................................................................................................................................................................................................ACGTAGAGTAGAT--------TATG-ATAC....................................................................................................................................................2111.001000001
.....................................................................................................................................................................................................................................................................GTTCTATGTAGGAATTGTTGT.............................................................................................................................2111.001010000
.......................................................................................................................................................................................................................T-------AGTCATACGTAGAGTAGAT--------T............................................................................................................................................................2111.001000001
.................................................................................................................C-------------------------GTCAACTG---CGGGAA--------C---------------AC--------CAT......................................................................................................................................................................................................................2111.001010000
..........................................................................................................................................................................................................TTGTATA-GTTTTT-------AGTCATAC................................................................................................................................................................................2111.001010000
................................................................................................TTTTATTTATTACAAAAC-------------------------GTC.........................................................................................................................................................................................................................................................................2111.001010000
.....................................................................ATTTTTTGTTGCGT--GAGAAA---C........................................................................................................................................................................................................................................................................................................................2111.001010000
...............................................................................................................................................................................................................................................................................GGAATTGTTGTTATTTTGC.....................................................................................................................1911.001010000
...............................................................................................................................................ACTG---CGGGAA--------C---------------AC--------CATCTTGT---..............................................................................................................................................................................................................2111.001000010
...............................................................................................................................................................................................................................................................ATACTAGTTCTATGTAGGAAA...................................................................................................................................2111.001010000
dp5
GCCCCCGCCCTCCCCTTCGCATAGATCATCGAATAAGAAGTCTGCTGCCAGTCCAATGGGTC-CAATGTGTTTTTTGTTGTGT--GAGAAA---CATTTTATTTATTACAAAAC-------------------------GTCAACTG---CGGGAA--------C---------------AC--------CATCTTGT---CTTGTATA-GTTTTT-------AGTCATACGTAGAGTAGAT--------TATG-ATACTAGTTCTATGTAGGAATTGTTGTTATTTTGCAGA-ATAATACAA------------TAATACAAT----GTG-TATGTGTGTATGTACAATATTCT--------T-------T-------------------------CGT-------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................................................................................................AAAC-------------------------GTCAACTG---CGGGAA--------C---------------AC--------.........................................................................................................................................................................................................................21111.00110900001100
..............................................................................................................................................AACTG---CGGGAA--------C---------------AC--------CATCTTG..................................................................................................................................................................................................................21110.001001000000000
.....................................................................................................................................................................................................................TTT-------AGTCATACGTAGAGTAGA......................................................................................................................................................................2115.0050200012000
...........................................................................................................................................................................................................................................................ATG-ATACTAGTTCTATGTAGG......................................................................................................................................2115.0050400001000
..............................................................................................................AAAC-------------------------GTCAACTG---CGGGAA--------C---------------A..................................................................................................................................................................................................................................2015.0050400000100
...............................................................................................................................................................................................................TA-GTTTTT-------AGTCATACGTAGA...........................................................................................................................................................................2114.0040100000120
...........................................................................................................ACAAAAC-------------------------GTCAACTG---CGGGAA--------...................................................................................................................................................................................................................................................2114.0040300001000
..................................................................................................................................................................................................................GTTTTT-------AGTCATACGTAGAGT.........................................................................................................................................................................2114.0040300001000
............................................................................................................CAAAAC-------------------------GTCAACTG---CGGGAA--------C---------------...................................................................................................................................................................................................................................2114.0040300000100
..............................................................................................................................................................................................................................................................................................................A------------TAATACAAT----GTG-TATGTGT....................................................................2013.0030200010000
.......................................................................................................TATTACAAAAC-------------------------GTCAACTG---CG...............................................................................................................................................................................................................................................................2113.0030100002000
....................................................................................................................................................................................................................................................................AGTTCTATGTAGGAATTGTTG..............................................................................................................................2113.0030200000100
..................................................................................................................................................................................................................................................................................ATTGTTGTTATTTTGCAGA-AT...............................................................................................................2113.0030100000200
..........................................................................................................TACAAAAC-------------------------GTCAACTG---CGGGA............................................................................................................................................................................................................................................................2113.0030300000000
.........................................................................................................TTACAAAAC-------------------------GTCAACTG---CGGG.............................................................................................................................................................................................................................................................2113.0030100000020
...................................................................................................TATTTATTACAAAAC-------------------------GTCAACTG---CGGGA............................................................................................................................................................................................................................................................2813.0030000000300
............................................................................................................................................................................................................................................................TG-ATACTAGTTCTATGTAGGA.....................................................................................................................................2113.0030000003000
...............................................................................................................................................................................................................................................................ATACTAGTTCTATGTAGGAAT...................................................................................................................................2113.0030110000010
...............................................................................................................AAC-------------------------GTCAACTG---CGGGAA--------C---------------AC--------.........................................................................................................................................................................................................................2012.0020200000000
.......................................................................................................................................................................................................................T-------AGTCATACGTAGAGTAGAT--------T............................................................................................................................................................2112.0020100001000
......................................................................................................................................................................................................................................................................TTCTATGTAGGAATTGTTGTT............................................................................................................................2112.0020000000200
................................................................................................................................................................................................................................................................TACTAGTTCTATGTAGGAAT...................................................................................................................................2012.0020000000020
............................................................................................................................................................................................................................................GTAGAT--------TATG-ATACTAGTTCT.............................................................................................................................................2112.0020200000000
............................................................................................................................................................................................................................................................TG-ATACTAGTTCTATGTAGGAA....................................................................................................................................2212.0020200000000
.....................................................................................................TTTATTACAAAAC-------------------------GTCAACTG---.................................................................................................................................................................................................................................................................2112.0020100000010
............................................................................................................................................TCAACTG---CGGGAA--------C---------------AC--------CATC.....................................................................................................................................................................................................................2012.0020110000000
.........................................................................................................................................................................................................................................................................TATGTAGGAATTGTTGTTATT.........................................................................................................................2112.0020100000010
...............................................................................................................................................................................................................................AGTCATACGTAGAGTAGAT--------T............................................................................................................................................................2012.0020200000000
...........................................................................................................................................................A--------C---------------AC--------CATCTTGT---CTTGTATA-G....................................................................................................................................................................................................2112.0020200000000
...................................................................................................................................................................................................................................................................TAGTTCTATGTAGGAATTGTA...............................................................................................................................2112.0020000000020
................TCGCATAGATCATCGAATAAGAAGTC.............................................................................................................................................................................................................................................................................................................................................................................2612.0020000000200
.................................................................................................................C-------------------------GTCAACTG---CGGGAA--------C---------------AC--------CAT......................................................................................................................................................................................................................2112.0020200000000
...............................................................................................................................................................................................................TA-GTTTTT-------AGTCATACGTAGAG..........................................................................................................................................................................2212.0020000200000
................................................................................................................................................................................................................................................................................................................................CAAT----GTG-TATGTGTGTATGT..............................................................2011.0010100000000
..........................................................................................................................................................................................................................................................TATG-ATACTAGTTCTATGTAG.......................................................................................................................................2111.0010000000010
...............................................................................................................................................ACTG---CGGGAA--------C---------------AC--------CATCTTGT---..............................................................................................................................................................................................................2111.0010100000000
...........................................................................................................................................................................................................................................................................TGTAGGAATTGTTGTTATTTT.......................................................................................................................2111.0010000000010
......................................................................................................................................................................................................................................CGTAGAGTAGAT--------TATG-ATACT...................................................................................................................................................2111.0010100000000
..............................................................................................................................................AACTG---CGGGAA--------C---------------AC--------CATCA....................................................................................................................................................................................................................1911.0010100000000
.........................................................................................................................................................................................................................................................................................TTATTTTGCAGA-ATAATACA.........................................................................................................2011.0010100000000
........................................................................................................................................................................................................................................................................CTATGTAGGAATTGTTGTTAT..........................................................................................................................2111.0010000000100
.............................................................................................................................................................................................................................................................................TAGGAATTGTTGTTATTTTGCAGA-.................................................................................................................2411.0010000000010
.............................................................................................................................................................................................................................................................................................................................ATACAAT----GTG-TATGTGTGTATG...............................................................2211.0010100000000
.........................................................................................................................................................................................................CTTGTATA-GTTTTT-------AGTCATA.................................................................................................................................................................................2111.0010100000000
................................................................................................................................................................................................................................................................TACTAGTTCTATGTAGGAATT..................................................................................................................................2111.0010100000000
.................................................................................................................................................................................................................................................................................AATTGTTGTTATTTTGCAGA-.................................................................................................................2011.0010000000010
.......................................................................................................TATTACAAAAC-------------------------GTCAACTG---CGA..............................................................................................................................................................................................................................................................2211.0010100000000
...............................................................................................................AAC-------------------------GTCAACTG---CGGGAA--------C---------------AC--------C........................................................................................................................................................................................................................2111.0010100000000
.................................................................................................................................................................................................................................................................................AATTGTTGTTATTTTGCAGA-A................................................................................................................2111.0010100000000
...................................................................................................................................................................................................................................ATACGTAGAGTAGAT--------TATG-AT......................................................................................................................................................2111.0010100000000
.....................................................................................................................................................................................................T---CTTGTATA-GTTTTT-------AGTCA...................................................................................................................................................................................2011.0010100000000
................................................................................................TTTTATTTATTACAAAAC-------------------------GTC.........................................................................................................................................................................................................................................................................2111.0010010000000
................................................................................................................................................................................................................A-GTTTTT-------AGTCATACGTAG............................................................................................................................................................................1911.0010000000010
.......................................................................................................TATTACAAAAC-------------------------GTCAACTG---.................................................................................................................................................................................................................................................................1911.0010100000000
.............................................................................................................................................................................................................................................................G-ATACTAGTTCTATGTAGGAA....................................................................................................................................2111.0010000010000
...................................................................................................................................................................................................................................................................TAGTTCTATGTAGGAATTGTTG..............................................................................................................................2211.0010000000010
........................................................................................................................................................................................................................................................................CTATGTAGGAATTGTTGTTATC.........................................................................................................................2211.0010000001000
......................................................................................................................................................................................................................TT-------AGTCATACGTAGAGTAGA......................................................................................................................................................................2011.0010100000000
.............................................................................................................AAAAC-------------------------GTCAACTG---CGGGAC--------...................................................................................................................................................................................................................................................1911.0010100000000
................................................................................................................................................................................................................................................................................GAATTGTTGTTATTTTGCAGA-.................................................................................................................2111.0010100000000
...................................................................................................................................................................................................................................ATACGTAGAGTAGAT--------TATG-A.......................................................................................................................................................2011.0010100000000
.............................................................................................................................................................................................................................................................................TAGGAATTGTTGTTATTTTGC.....................................................................................................................2111.0010010000000
......................................................................................................TTATTACAAAAC-------------------------GTCAACTG---C................................................................................................................................................................................................................................................................2111.0010000010000
..........................................................................................................................................................................................................................................................TATG-ATACTAGTTCTATGTAGGAAT...................................................................................................................................2511.0010000000010
..............................................................................................................................................................................................................................................................................................................A------------TAATACAAT----GTG-TATGTGTG...................................................................2111.0010100000000
...........................................................................................................................................GTCAACTG---CGGGAA--------C---------------AC--------CATCTT...................................................................................................................................................................................................................2311.0010000100000
....................................................................TGTTTTTTGTTGTGT--GAGAA.............................................................................................................................................................................................................................................................................................................................2011.0010000100000
.................................................................................................................................................................................................................................................T--------TATG-ATACTAGTTCTATGTA........................................................................................................................................2111.0010100000000
...............TTCGCATAGATCATCGAATAAGAAGTC.............................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
........................................................................................................................................................................................................................................TAGAGTAGAT--------TATG-ATACTAG.................................................................................................................................................2111.0010100000000
.................................................................................................................................................................................................................................................................................AATTGTTGTTATTTTGCAGA-C................................................................................................................2111.0010001000000
.................................................................................................................................................................................................................................................................................AATTGTTGTTATTTTGCAGA-AA...............................................................................................................2211.0010100000000
...........................................................................................................................................GTCAACTG---CGGGAA--------C---------------AC--------CATC.....................................................................................................................................................................................................................2111.0010100000000
...........................................................................................................................................................................................................................................................................................................................TAATACAAT----GTG-TATGTGTGT..................................................................2111.0010000010000
..................................................................................................................................................................................................................................................................................ATTGTTGTTATTTTGCAGA-A................................................................................................................2011.0010100000000
....................................................................................................................................................................................................................................TACGTAGAGTAGAT--------TATG-ATA.....................................................................................................................................................2111.0010100000000
.......................................................................................................TATTACAAAAC-------------------------GTCAACTG---CGGGA............................................................................................................................................................................................................................................................2411.0010100000000
............................................................................................................................................................................................................................................................................................................CAA------------TAATACAAT----GTG-TATGT......................................................................2011.0010100000000
..................................................................................................................................................................................................................GTTTTT-------AGTCATACGTAGAG..........................................................................................................................................................................2011.0010000000100
...............................................................................................................................................................................................................................................................ATACTAGTTCTATGTAGGA.....................................................................................................................................1911.0010100000000
.................................................................................................................C-------------------------GTCAACTG---CGGGAA--------C---------------AC--------CA.......................................................................................................................................................................................................................2011.0010100000000
................................................................................................................AC-------------------------GTCAACTG---CGGGAA--------C---------------AC--------C........................................................................................................................................................................................................................2011.0010100000000
.............................................................................................................................................CAACTG---CGGGAA--------C---------------AC--------CATCTT...................................................................................................................................................................................................................2111.0010100000000
.......................................................................................................................................................................................................................................................................TCTATGTAGGAATTGTTGTTA...........................................................................................................................2111.0010100000000
..............................GAATAAGAAGTCTGCTGCC......................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
................................................................................................................................................................................................................................................AT--------TATG-ATACTAGTTCTATGT.........................................................................................................................................2111.0010000000100
.....................................................................................................................................................................................C--------CATCTTGT---CTTGTATA-GTTT.................................................................................................................................................................................................2111.0010100000000
................................................................................................................AC-------------------------GTCAACTG---CGGGAA--------C---------------AC--------.........................................................................................................................................................................................................................1911.0010100000000
...............................................................................................................................................................................................ATCTTGT---CTTGTATA-GTTTT................................................................................................................................................................................................2011.0010100000000
.................................................................................................................................................................................................CTTGT---CTTGTATA-GTTTTT-------AG......................................................................................................................................................................................2111.0010000001000
.................................................................................................................................................................................................................................................................................................................................AAT----GTG-TATGTGTGTATGTAC............................................................2111.0010000100000
.....................................................................................................................................................................................................................................................................GTTCTATGTAGGAATTGTTG..............................................................................................................................2011.0010000000010
..............................................................................................................................................................................................................................................................................AGGAATTGTTGTTATTTTGC.....................................................................................................................2011.0010100000000
........................................................................................................ATTACAAAAC-------------------------GTCAACTG---CG...............................................................................................................................................................................................................................................................2011.0010100000000
..........................................................................................................TACAAAAC-------------------------GTCAACTG---CGGG.............................................................................................................................................................................................................................................................2011.0010000000010
......................................................................................................................................................CGGGAA--------C---------------AC--------CATCTTGT---CTTG..........................................................................................................................................................................................................2111.0010100000000
................................................................................................................................................................................................................................................................................................................................CAAT----GTG-TATGTGTGTATG...............................................................1911.0010000010000
......................................................................TTTTTTGTTGTGT--GAGAAA---C........................................................................................................................................................................................................................................................................................................................2011.0010000001000
...................................................................................................................................................................................................................TTTTT-------AGTCATACGTAGAGT.........................................................................................................................................................................2011.0010100000000
...............................................................................................................................................................................................................................................................ATACTAGTTCTATGTAGGAA....................................................................................................................................2011.0010100000000
droMoj3
ATA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTTTTAGCATATATATATAGAGG----ATATATAATG--TAAATATAA----TATGTGTAAGATCTATTACGAACATGCCG--ATTATATAA------------T--------CTAGTTGTTATATATATATATCAAATAAATGTATGTAA--------------AA-C---------AAAATCTTTGT-------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...............................................................................................................................................................................................................................................................................AGATCTATTACGAACATGCCG--.................................................................................................................2115.005500000
..............................................................................................................................................................................................................................................................................AAGATCTATTACGAACATGCC....................................................................................................................2113.003300000
....................................................................................................................................................................................................................TTTTAGCATATATATATAGAG..............................................................................................................................................................................2112.002200000
.............................................................................................................................................................................................................................................................................TAAGATCTATTACGAACATGC.....................................................................................................................2112.002200000
................................................................................................................................................................................................................................................................................GATCTATTACGAACATGCCG--A................................................................................................................2112.002200000
......................................................................................................................................................................................................................................GAGG----ATATATAATG--TAAATA.......................................................................................................................................................2011.001000001
....................................................................................................................................................................................................................TTTTAGCATATATATATAGAGG----.........................................................................................................................................................................2211.001100000
...................................................................................................................................................................................................................................................................................CTATTACGAACATGCCG--ATTA.............................................................................................................2111.001100000
.............................................................................................................................................................................................................................................................ATATAA----TATGTGTAAGATCTA.................................................................................................................................2111.001100000
...........................................................................................................................................................................................................................ATATATATATAGAGG----ATATAT...................................................................................................................................................................2111.001100000
.........................................................................................................................................................................................................................................................................TGTGTAAGATCTATTACGAAC.........................................................................................................................2111.001100000
....................................................................................................................................................................................................................................TAGAGG----ATATATAATG--TAAAT........................................................................................................................................................2111.001100000
.........................................................................................................................................................................................................................GCATATATATATAGAGG----ATAT.....................................................................................................................................................................2111.001000001
..............................................................................................................................................................................................................................................................................................ATGCCG--ATTATATAA------------T--------CTAGT..............................................................................2111.001100000
..........................................................................................................................................................................................................................................................TAAATATAA----TATGTGTAAGAT....................................................................................................................................2111.001100000
..................................................................................................................................................................................................................................................................................TCTATTACGAACATGCCG--ATT..............................................................................................................2111.001100000
...................................................................................................................................................................................................................................................TAATG--TAAATATAA----TATGTGT.........................................................................................................................................2111.001100000
droGri2
TAT--------------------C----------------------------------------------------------------------------ATTTGTTATAACAATTACAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA-------------TAT--------ATATATA---TATACATATAT---------GTATGTATGT-------TT-TTAA-A---------TAAATGTGTGT-------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.....................................................................................................................................................................................................................................................................................................................................................................TGTATGT-------TT-TTAA-A---------TAAATGT...........2111.00110
........................................................................................................................................................................................................................................................................................................................................................T---------GTATGTATGT-------TT-TTAA-A---------TA................2011.00110
droAna3
TA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GT---TTTA-TTAGGAATTGTTGTTAT--TGCAAAAATAATACAA------------T--------AAGCTTG-TATGTGTATATGTACAATAAATGTGTAGA----------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..................................................................................................................................................................................................................................................................GT---TTTA-TTAGGAATTGTTGTT............................................................................................................................2111.001000010
droBip1
AT---------------------------------------------------------------------------------------------AATTAATTTATTAAATA--TTATTA-----------------------AAAG-------TA----------------------------------CATCC---TTTTCTTTATACCATTTT-------AGTCATAGTTT----AATTTTAAA----AAC-AAAATAT-TTTA-TTAGGAATTGTTGTTAT--TGCAGAAATAATACAA------------T--------AAGCTTG-TATGTGTATATGTACAATAAATGTGCGGA----------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGTTGTTAT--TGCAGA-ATACAAAA--TA----ATACA-------------------AAAAATTGTGTACAATAAATGTAGATATTA-------TCCTTAGTG---------CCTGT---GTCTGCTAT-SizeHit CountTotal NormTotal
No Reads
droFic1
TCC----------------GTTTTAGCATCGAATAAGAAGTCT---GCCAGTCAAATTCTTATCATTACGAT------TACAA-AGGGAAAATCCGATTAATTTATTACAAAATTTAATA------TACATGGACAATCGCCAGCAGT--------------------------------CCCAAAAA--C---A---CTT--TTTATAC--ATTT-------AGTCATAGTTT----AAAATTAGTG--TATGTGTACTGTTTATCTGTAGGAATTGTTGTTAT--TGCAGA-ATAATACAAATT----ATGTT-------------------TGTGCATATGTACAATAAGTTTAGAGGTTT-------CTCT----------------------CGG-------SizeHit CountTotal NormTotal
No Reads
droEle1
T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTATTTATGTATAGGAATTG---TTAT--TGCAGA-ATAATACAAATT----ATGTA-------------------TGTGCATATGTACAATAAATTTAGA------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TC--------------------TTAGCATCGAATAAGAAGTCT---GCCAGTCAAATTCTTATCATTACGAT------TACAAAAGGGGAAATCCGATTAATTTATTGCAAAATTTTG--------TGTATGTAAACGCGCCAGGAGT-------AGTCCTCCTCCC------CCTTGT-CCCAAAAAATC---A---ATT--TTTTTAC--CTTT-------AGTCATAGTGT----AAATTTACTATATATGTTTACTGTTTATGTTTAGGAATTGTTGTTAT--TGCAGA-ATAATACAAATT----ATGTA-------------------TGTGCATATGTACAATAAATTTGGATGTTT-------TCTTTAA-C---------TGAAT---CGT-------SizeHit CountTotal NormTotal
No Reads
droBia1
TA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTT---------------------T--TGGAG--------GATGTT----ATGTT-------------------TGCGCAAAAATACAACAAT-TTAAATGTTT-------TTTTTAA-G---------TCAAT---CTTTGGAGTGSizeHit CountTotal NormTotal
No Reads
droTak1
TT--------------------TTAGCATCGAATAAGAAGTCT---GCCAGTCAAATTCTTATCATTACGAT------TACGA--GGGGAAATCCGATTAATTTATTAAACAAATTATTA------TATAAATACACTCGCCAGGAGA-------AGACCTCCTCCCCCCTTCCCTTGTCCCCAAAAAAAC---C---TTT--TTTTTAC--ATTT-------AGTCATAGAGT----AAAGTTACTG--TATCTGTACTGTTTACGTGTAGGAATTGTTGTTAT--TGCAGA-ATAATACAAATT----ATGTA-------------------TGTGCATATGTACAATAAATTTAAATGTTT-------TCTTTT---TTCTTCAACTGGAT-------------SizeHit CountTotal NormTotal
No Reads
droEug1
CTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT--TTTATAC--ATTT-------AGTCATAGTGT----AAAATTACCA-ATATCTGTACTGTTTACGTGTAGGAATTGTTGTTAT--TGCAGA-ATAATACAAATTGTGTATGTA-------------------TGTGCATATGTACAATAAATTTAAATGTTTAAATGTTTCTTTT---TTGTTCAACTCAAT---CGC-------SizeHit CountTotal NormTotal
No Reads
dm3
TT--------------------TTAGCATCGAATAAGAAGTCT---GCCAGTCAAATTCTTATCATTACGATT-----TACGA--GGGGAAATCCGATTAATTTATTACAAAATTTATTAGA----TATATGTACACTCGTCAGGGGT------TATACCTCTAT---------------CC-------------AAACTT--TTTATAC--ATTT-------AGTCATAGTGT----ACAACTACTG--TATGTGTACTGCTTACGTGTAGGAATTGTTGTTAT--TGCAGA-ATAAAACAAATT----ATGAA-------------------TGTGCATATGTACAATAAACATCAATGTTC-------TCTT--------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...........................................................................................................................................................................................................................................................ATGTGTACTGCTTACGTGTAG.......................................................................................................................................21154.00540000000100000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000002100000000000000000000000000000000000010010000000000000000000000000000000000000000000000000000000000000000000000000000001100280120110010000002210000000000105002032200100000210100
..........................................................................................................................................................................................................................................................TATGTGTACTGCTTACGTGTA........................................................................................................................................21145.004500000000000000000000000000000000000000000100000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000500000000000300000000000000000000000000100000000000000000000000000010000000000000000000000000000000000000000000000000004002140000000000000000521000000000002000001100000000100000
......................................................................................................................................................................................................................................................................TTACGTGTAGGAATTGTTGTT............................................................................................................................21142.00420000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000010000040000000211000000000000000001000000001000000000000000000000000000000000000100370010001000000111101020000020000000110000000101300100
...................................................................................................................................................................................................................................................................TGCTTACGTGTAGGAATTGTT...............................................................................................................................21134.00340000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000110000000000000001000000000000001001103000000000000000000000000000000000000000000100100390010000000000000201000000000000000000000000000200000
...........................................................................................................................................................................................................................................................................TGTAGGAATTGTTGTTAT--TGC.....................................................................................................................21132.00320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000010101000000000000000000000000010000000000002000001500141000000000000101001010011000000001000000000100400000
........................................................................................................................GA----TATATGTACACTCGTCAGG......................................................................................................................................................................................................................................................................21132.00320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000200000000001000000000000010000000000000001013205000000000000000010000000100000000001000000000000230000000000000000000000000010101001000100000000101000
............................................................................................................................................................................................................................................................TGTGTACTGCTTACGTGTAGG......................................................................................................................................21131.00310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000050000000000000000000000000100000000000000000000000000000000010000000000000000000400220000000000000001000000000000100000010200000201500100
.................................................................................................................................ATGTACACTCGTCAGGGGT------TA...........................................................................................................................................................................................................................................................21126.00260000000000000000000000000000000000000100010000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000001000000000000000000200000001003000001000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000112100010200100000202000
.....................................................................................................................................................................................................................................................................CTTACGTGTAGGAATTGTTGT.............................................................................................................................21122.00220000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001000001002000000000000000000000000000000001000000000000000000000000000100100000000000001000030000000000800000
.............................................................................................................................................................................................................................................................GTGTACTGCTTACGTGTAGG......................................................................................................................................20120.00200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000001000000000000000000000000000000000002010010000000000022100210100201000
.............................................................................................................................................................................................................................................................GTGTACTGCTTACGTGTAGGA.....................................................................................................................................21118.00180000000000000000000000000000000000000002000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000010000000000000000000000000000000000000000000100000000000000000000000101000000000000000000000000000000000000000000000000000000000020000100000000000010000010000001000000100001011000000
...............................................................................................................................ATATGTACACTCGTCAGGGGT------.............................................................................................................................................................................................................................................................21117.00170000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000011000202010000000000000000000000000000000000000000000000000000000000000001021000000000101000000000000000101000
.........................................................................................................................................................................................................................................................................CGTGTAGGAATTGTTGTTAT--T.......................................................................................................................21116.00160000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000012000000000000000000000000000000000000000000000000190000200000000000000000000000000000000000000000000000
..............................................................................................................................TATATGTACACTCGTCAGGGG....................................................................................................................................................................................................................................................................21115.00150000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000100100000000000000000000100000000000000000000000000000000000000000000000000000100000010000000100000000000000000000000000000000000000000000100000000000001000000000001000000000000010400000
................................................................................................................................................................................................................................................................TACTGCTTACGTGTAGGAATTG.................................................................................................................................22112.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000800000000200000000000000000000000000000000000000000000000000000000000010000000000000000100000000000000000000000000000000000
.........................................................................................................................A----TATATGTACACTCGTCAGGG.....................................................................................................................................................................................................................................................................21111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000110000000000000000001000000000000000000100000000400000
.......................................................................................................................................................................................................................................................................TACGTGTAGGAATTGTTGTTA...........................................................................................................................21110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000100001000000000000000000000000000000000000000000000000020000000000000001100000000000002000000000100000000000
.................................................................................................................................................................................................................................................................ACTGCTTACGTGTAGGAATTG.................................................................................................................................21110.00100000000000000000000000010000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000010000000000000000000000000000000000000100000000000000000000000000000000000001100000000000000000100000000000000000001000000000000000000000000000000000
....................................................................................................................................................................................................................................................................GCTTACGTGTAGGAATTGTTG..............................................................................................................................2119.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100020000000000000000022000000000000000000000000000010000
............................................................................................................................................................................................................................................................TGTGTACTGCTTACGTGTAG.......................................................................................................................................2019.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100110000000000000002400000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................TAGGAATTGTTGTTAT--TGCAGA-AT...............................................................................................................2419.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................TAGA----TATATGTACACTCGTCA........................................................................................................................................................................................................................................................................2118.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000020000000000000000000000000000000100000000000000210000
........................................................................................................................................................................................................T--TTTATAC--ATTT-------AGTCATAGT...............................................................................................................................................................................2118.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000001000120000200000000001000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................TGTACTGCTTACGTGTAGGA.....................................................................................................................................2018.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000010000000000010000000000000000000000000000000010000000000000000000000000000000100020000000000000001000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................CTGCTTACGTGTAGGAATTGT................................................................................................................................2118.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000001000000000000000000000000000000000000000000010000001000000000000000000000000000000000000000000000000010000000000000000001000000000000000000000000000200000
.......................................................................................................................................................................................................................T-------AGTCATAGTGT----ACAACTACT................................................................................................................................................................2117.0070000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000001000000000000000000000000000100001000
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.....................................................................................................................TTAGA----TATATGTACACTCGTCAGGGGT------ATC..........................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................TAGTGT----ACAACTACTG--TATG.........................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
............................................................................................................................................................................................................................................................................GTAGGAATTGTTGTTAT--TGCAAT-C................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................GTGTACTGCTTACGTGTAGGAA....................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.................................TAAGAAGTCT---GCCAGTCAAATTCT...........................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................TGTAGGAATTGTTGTTAT--T.......................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................CATAGTGT----ACAACTACTG--TATGTG.......................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................AGTCATAGTGT----ACAACTACTT--.............................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................TAGGAATTGTTGTTAT--TGCA....................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................TG--TATGTGTACTGCTTAC.............................................................................................................................................1811.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................GTCT---GCCAGTCAAATTCTT..........................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................AACAAATT----ATGAA-------------------TGTGCATA.................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.........................................................................................................................................TCGTCAGGGGT------TATACCTCTAT---------------CC-------------AA..................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................TTATCATTACGATT-----TACGA--GGGGA.............................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
....................................................................................................ATTTATTACAAAATTTATTAG..............................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................TAAGAAGTCT---GCCAGTCAAATTCTTATCA......................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................GA----TATATGTACACTCGTCAGGGGT------TA...........................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................AAAATTTATTAGA----TATATGTA.................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................AATTGTTGTTAT--TGCAGA-ATA..............................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................TACTGCTTACGTGTAGGAATTGTTGA.............................................................................................................................2611.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................TACTG--TATGTGTACTGCTTACG............................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................TTT-------AGTCATAGTGT----ACAACTACT................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................CAGGGGT------TATACCTCTAT---------------CC-------------AA..................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................TAT--TGCAGA-ATAAAACAAATT----ATG..............................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................TACTG--TATGTGTACTGCTTACGTG..........................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................GTACTGCTTACGTGTAGG......................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................TTGTTGTTAT--TGCAGA-ATAAA............................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................TACCTCTAT---------------CC-------------AAACTT--TTTATAC--ATT................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTTTACGTGTAGGAATTGTTGTTAT--TGCAGA-ATAAAACAAATT----ATGAA-------------------TGTGCATATGTACAATAAACATCAAGGTTT-------TCTT--------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......................................................................................................................................................................................................................................................................TTACGTGTAGGAATTGTTGTT............................................................................................................................2115.00500000011110001000
.........................................................................................................................................................................................................................................................................CGTGTAGGAATTGTTGTTAT--T.......................................................................................................................2113.00300000001200000000
......................................................................................................................................................................................................................................................................TTACGTGTAGGAATTGTTGTTAT--TGC.....................................................................................................................2612.00200000002000000000
.............................................................................................................................................................................................................................................................................TAGGAATTGTTGTTAT--TGCAGA-ATAA.............................................................................................................2612.00200000002000000000
..........................................................................................................................................................................................................................................................................................TAT--TGCAGA-ATAAAACAAATT----ATGAA-------------------TG.......................................................................2811.00100000001000000000
......................................................................................................................................................................................................................................................................TTACGTGTAGGAATTGTTGTTAT--TGCAGA-.................................................................................................................2911.00100000010000000000
.............................................................................................................................................................................................................................................................................TAGGAATTGTTGTTAT--TGCAGA-ATAAAAC..........................................................................................................2911.00100000001000000000
.......................................................................................................................................................................................................................................................................TACGTGTAGGAATTGTTGTTAT--TGC.....................................................................................................................2511.00100000000010000000
.......................................................................................................................................................................................................................................................................................TGTTAT--TGCAGA-ATAAAA...........................................................................................................1811.00100000000100000000
............................................................................................................................................................................................................................................................................GTAGGAATTGTTGTTAT--TGCA....................................................................................................................2111.00101000000000000000
.............................................................................................................................................................................................................................................................................TAGGAATTGTTGTTAT--TGCAGA-ATAAA............................................................................................................2711.00100000001000000000
.....................................................................................................................................................................................................................................................................TTTACGTGTAGGAATTGTTGTTAT--TGC.....................................................................................................................2711.00100000001000000000
...................................................................................................................................................................................................................................................................TGTTTACGTGTAGGAATTG.................................................................................................................................1911.00100001000000000000
.............................................................................................................................................................................................................................................................................TAGGAATTGTTGTTAT--TGCA....................................................................................................................2011.00100001000000000000
droSec2
T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTTTACGTGTAGGAATTGTTGTTAT--TGCAGA-ATAAAACAAATT----ATGAA-------------------TGTGCATATGTACAATAAACATCAATGTTT-------TCTT--------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....................................................................................................................................................................................................................................................................GTTTACGTGTAGGAATTGTTGT.............................................................................................................................2211.0010001
droYak3
TGC------CAGCACATCAGTTTTAGCATCGAATAAGAAGTCT---GCCAGTCAAATTCTTATCATTACGAT------TACGA--GGGGAAATCCGATTAATTTATTACAAAATTTATTAGCTATATGTATGTACACTCGTCAGGTGTTAAGGTTAACCCTCTAC---------------CC--------CAA-----CTT--TTTTTAC--ATTT-------AGTCATAGTGT----ACAACTACTG--TATGTGTACTGTTTACGTGTAGGCATTGTTGTTAT-TTGCAGA-ATAAAACAAATT----ATGAA-------------------TGTGCATATGTACAATAACTTGCAATGTTT-------TCTTTAA-T---------TT------TGT-------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......................................................................................................................................................................................................TT--TTTTTAC--ATTT-------AGTCATAGTGT----.........................................................................................................................................................................2411.00100000010000
..............................................................................................................................................................................................................................................ACAACTACTG--TATGTGTACTGTTT...............................................................................................................................................2411.00100100000000
droEre2
C--------------------------ATCGAATAAGAAGTCT---GCCAGTCAAATTCTTATCATTACGAT------TACGA--GGGGAAATCCGATTAATTTATTACAAAATTTCTTAGG----CATA-GTACAC--GTCA----------------------------------------------------AAA-CT--TTTTTAC--ATTT-------AGTCACAGTGT----ACAACTACTG--TGTATGTACTGTTTACGTATAGGAATTGTTGTTAT--TGCAGA-ATAAAACAAATT----ATAAA-------------------TGTGCATATGTACAATAAACTGCAATGTTT-------TCCT--------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..................................................................................................................TTCTTAGG----CATA-GTACAC--GTC.........................................................................................................................................................................................................................................................................2113.0031000110
.....................................................................................................................................................................................................................TTT-------AGTCACAGTGT----ACAACT...................................................................................................................................................................2012.0020000020
...........................................................................................................................................................................................................TTTTTAC--ATTT-------AGTCACAGTG..............................................................................................................................................................................2112.0022000000
.....................................................................................................................................................................................................................................................................TTTACGTATAGGAATTGTTGT.............................................................................................................................2112.0020000110
.....................................................................................................................................................................................................................................AGTGT----ACAACTACTG--TGTATG.......................................................................................................................................................2112.0021000010
................................................................................................................................................................................................................................................................TACTGTTTACGTATAGGAATT..................................................................................................................................2112.0020000110
.........................................................................................................................................................................................................................................................................CGTATAGGAATTGTTGTTAT--TGC.....................................................................................................................2311.0010000010
..................................AAGAAGTCT---GCCAGTCAAATTCT...........................................................................................................................................................................................................................................................................................................................................................2311.0010000100
..............................................................................................................................................................................................................................................................TGTACTGTTTACGTATAGGAA....................................................................................................................................2111.0010000100
................................................................ATTACGAT------TACGA--GGGGAAATCC........................................................................................................................................................................................................................................................................................................................2311.0010010000
................................................................ATTACGAT------TACGA--GGGGAAAT..........................................................................................................................................................................................................................................................................................................................2111.0010000100
......................................................................................................................................CAC--GTCA----------------------------------------------------AAA-CT--TTTTTAC--AT.................................................................................................................................................................................................2111.0011000000
...........................................................................................................................................................................................................................................................................TATAGGAATTGTTGTTAT--TGC.....................................................................................................................2111.0010000100
......................................................................................................................................................................................................................................................TG--TGTATGTACTGTTTACGTA..........................................................................................................................................2111.0010000010
...............................................................................................................................................................................................................................................................GTACTGTTTACGTATAGGAATTGT................................................................................................................................2411.0011000000
...................................................................................................................................................................................................................................................................TGTTTACGTATAGGAATTGTTG..............................................................................................................................2211.0010000100
............................................................................................TCCGATTAATTTATTACAAAATTTC..................................................................................................................................................................................................................................................................................................2511.0011000000
.................................................................................................................TTTCTTAGG----CATA-GTACAC--GT..........................................................................................................................................................................................................................................................................2111.0011000000
..................................................................................A--GGGGAAATCCGATTAATT................................................................................................................................................................................................................................................................................................................1911.0010000100
................................................................................................................ATTTCTTAGG----CATA-GTACA...............................................................................................................................................................................................................................................................................1911.0011000000
..................................................................TACGAT------TACGA--GGGGAAATC.........................................................................................................................................................................................................................................................................................................................2011.0011000000
..........................................................................................................TACAAAATTTCTTAGG----CATA-GTACAC--G...........................................................................................................................................................................................................................................................................2711.0011000000
............................................................................................................CAAAATTTCTTAGG----CATA-GT..................................................................................................................................................................................................................................................................................2011.0011000000
.............................................................................................................................................................................................................................................................................................................AAATT----ATAAA-------------------TGTGCATATG...............................................................2011.0011000000
...............................................................................................................................................................................................................................................................................................................ATT----ATAAA-------------------TGTGCATATGT..............................................................1911.0011000000
.............................................................................................................................................................................................................TTTAC--ATTT-------AGTCACAGTGT----.........................................................................................................................................................................2011.0011000000
.......................................................................................................................................AC--GTCA----------------------------------------------------AAA-CT--TTTTTAC--ATT................................................................................................................................................................................................2111.0010000010
..............................................................................................................AAATTTCTTAGG----CATA-GTAC................................................................................................................................................................................................................................................................................2011.0011000000
.......................................................................................................................................................................................................CT--TTTTTAC--ATTT-------AGTCACAG................................................................................................................................................................................2111.0011000000
.................................................................................................................................................................................................................................................................................AATTGTTGTTAT--TGCAGA-AT...............................................................................................................2011.0010010000
.................................................................TTACGAT------TACGA--GGGGAAT...........................................................................................................................................................................................................................................................................................................................1911.0010000010
....................................................................................................................................................................................................................................................................GTTTACGTATAGGAATTGTTG..............................................................................................................................2111.0010000100

Generated: 06/08/2015 at 03:11 PM