ID:

dpe_782

 Coordinate:

scaffold_15:136541-136682 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-7.5 -7.5 -7.5

Flybase annnotation

exon [dper_GLEANR_18161:13]; CDS [Dper\GL16507-cds]; exon [dper_GLEANR_18161:12]; CDS [Dper\GL16507-cds]; intron [Dper\GL16507-in]

Repeatable elements

NameClassFamilyStrand
(CAG)nSimple_repeatSimple_repeat+
mature
star
  1. scaffold_27:1023203-1023221 +
  2. scaffold_18:1207225-1207243 +
  3. scaffold_1:656661-656679 +
  4. scaffold_0:2222463-2222481 +
  5. scaffold_3:2992622-2992640 +
  6. scaffold_3:6512080-6512098 +
  7. scaffold_4:861232-861250 +
  8. scaffold_7:640144-640162 +
  9. scaffold_76:250069-250087 +
  10. scaffold_12:1630600-1630618 +
  11. scaffold_11:997655-997673 +
  12. dpe_751  scaffold_13:1615939-1615957 +
  13. scaffold_17:1859948-1859966 +
  14. scaffold_23:957843-957861 +
  15. scaffold_23:1549771-1549789 +
  16. scaffold_29:885602-885620 +
  17. scaffold_36:606217-606235 +
  18. scaffold_127:7597-7615 +
  19. scaffold_127:45430-45448 +
  20. scaffold_127:58214-58232 +
  21. scaffold_10:1390734-1390752 +
  22. scaffold_18:1468695-1468713 +
  23. scaffold_1:2635758-2635776 +
  24. scaffold_0:7219002-7219020 +
  25. scaffold_2:2884725-2884743 +
  26. scaffold_6:3134814-3134832 +
  27. scaffold_3:2446158-2446176 +
  28. scaffold_3:2959989-2960007 +
  29. scaffold_4:721836-721854 +
  30. scaffold_5:2891471-2891489 +
  31. scaffold_7:4050401-4050419 +
  32. scaffold_8:664078-664096 +
  33. scaffold_12:1623843-1623861 +
  34. scaffold_13:1871457-1871475 +
  35. scaffold_14:52157-52175 +
  36. scaffold_60:67513-67531 +
  37. dpe_782  scaffold_15:136548-136566 +
  38. scaffold_15:684052-684070 +
  39. scaffold_67:146599-146617 +
  40. scaffold_24:186552-186570 +

Sense Strand Reads

##################################################----------------------------------------------------------------------------------------------------------------------------------------------##################################################
GAGGGACGCATCCGCTAATCATGACGCACTCGCGCCTGCAGGACTACGCGGTCCAGCAGCAGCAGCAGCAACAACAGCAGCAGCAGCAGCAACAACAGCAGGCGGCTGTGGCGGCGGCGGCAGCAGCTGCCTCATATCATCGCTCGAACCCCACGAGTCCCACGACCATGCCGCAGGCCTCCACAATCCCAGACGGGCTACGTGCTGCGCTACGGTAGAGCCGCCGGAGGGAGGCAGCGGCA
*********************************************************....((.((.((.......((.((....)).)).......))..)).))**************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 M021
embryo
 V111
male body		 V057
head
 V042
embryo
........................................................................................GCAACAACAGCAGGCGGC........................................................................................................................................ 18 0 1 1.00 1 1 0 0 0 0
................................................................................................................................................CGAACCCCCCGAGTCCCACGACCATG........................................................................ 26 1 1 1.00 1 1 0 0 0 0
................................................................................................................................................................................................................GCTACGGTGGAGCCGCCGGAGGGAGC........ 26 2 1 1.00 1 0 0 1 0 0
.........ATCCGCTAATCATGACGCACTCGCGCCT............................................................................................................................................................................................................. 28 0 1 1.00 1 0 1 0 0 0
.............................................................................................................................................................................................CAGACGGGCTACGTGCTG................................... 18 0 1 1.00 1 1 0 0 0 0
...............................................................................................................................................................................................................................CCGGAGGGAGGCAGCAGT. 18 2 16 0.06 1 0 0 0 1 0
..............................................................................................................................................................................................................................GCCGGTGGGAAGGAGCGGCA 20 3 17 0.06 1 1 0 0 0 0
.........................................................................ACAGCAGCAGCAGCAGCAAC..................................................................................................................................................... 20 0 20 0.05 1 1 0 0 0 0
...............................................................................................................................................................................................................................CCGGTGGGAAGGAGCGGCA 19 3 20 0.05 1 1 0 0 0 0
...................................................................GCAACAACAGCAGCAGCAG............................................................................................................................................................ 19 0 20 0.05 1 0 0 0 0 1
..................................................................AGCAACAACAGCAGCAGCAGC........................................................................................................................................................... 21 0 20 0.05 1 0 0 0 0 1
.........................................................AGCAGCAGCAGCAACAACA...................................................................................................................................................................... 19 0 20 0.05 1 0 0 0 1 0

Anti-sense strand reads

CTCCCTGCGTAGGCGATTAGTACTGCGTGAGCGCGGACGTCCTGATGCGCCAGGTCGTCGTCGTCGTCGTTGTTGTCGTCGTCGTCGTCGTTGTTGTCGTCCGCCGACACCGCCGCCGCCGTCGTCGACGGAGTATAGTAGCGAGCTTGGGGTGCTCAGGGTGCTGGTACGGCGTCCGGAGGTGTTAGGGTCTGCCCGATGCACGACGCGATGCCATCTCGGCGGCCTCCCTCCGTCGCCGT
****************************************************************************************************************************************....((.((.((.......((.((....)).)).......))..)).))********************************************************* 		Read size # Mismatch Hit Count Total Norm Total V057
head
 M042
female body
.....................................................................................................................................................................................................................CTACCTCGGCGGCCTCCCTC......... 20 2 1 1.00 1 1 0
...................................................................................................................................................TGGGTTGATCAGGGTGCCGGT.......................................................................... 21 3 2 0.50 1 1 0
......................................................................................................................................................................GTACCGCGTCCGTAGCTGTTAG...................................................... 22 3 2 0.50 1 0 1
....................................................................................................................................................................................................CGTTGCACGACCCGTTGCCA.......................... 20 3 7 0.14 1 1 0
.........................................................................................................................................................................CCGCGTCCGTAGCTGTTAGG..................................................... 20 3 9 0.11 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_15:136491-136732 + dpe_782 GA--GGGACGCATCCGCTAA---TCATGACGCA---CTCGCGCCTGCAGGACTACGCGGTCCAGCAGCAG---CA---GCAGCAACAACAGCAGCAGCA------GCAGCAACAACA---GCAGGC---GG---------------CTGTGGC------G---------------GCGGCGGCAGCAGCTGCCTCATATCATCGCTCGAACCCCACGAGTCCCACGACCATGCCGCAGGCC-------------------TC---CACAA---TC--CCAGACGGGCTACGTGCTGCGCTACGGTAG------AG------C----------C-----------------------------------GCCGGAG--------------GGAGGCAGCGGCA
dp5 XL_group1a:7786220-7786462 + GA--GGGACGCATCCGCTAA---TTATGACGCA---CTCGCGCCTGCAGGACTACGCGGTCCAGCAGCAG---CA---GCAACAACAGCAGCAGCAGCAACAGCAGCA---ACACCA---GCAGGC---GG---------------CTGTGGC------G---------------GCGGCGGCAGCAGCTGCCTCATATCATCGCTCGAACCCCACGAGTCCCACGACCATGCCGCAGGCC-------------------TC---CACAA---C---CCAGACGGGCTACGTGCTGCGCTACGGTGG------AG------C----------C-----------------------------------GCCGGA---------------GGGAGCAGCGGCA
droWil2 scf2_1100000004909:2844480-2844734 + GT--GGGGCTCATCCTTTAA---TCATGACGCA---TTCGCGGCTGCAGGACTATGCAGCCCAGCAGCAA---CA---CCAACAACTTCAGCAGCAGCA------GC------AACA---ACAAGCGGTAG---------------CGGCTGCAGCTGC------T---------------GCGGCAGCAGCTTCATATCATCGCTCCAACCCCACAAGTCCCACAACAATGCCACAAACA-------------------TC---AGCC------GCTCA---AACCTATATACTACGTTATGGCGGCGGCGGAGGCGGCGGTGGC------G------------------GCGGTGGC---------ATTGGGGCA---------GCC---------GGCA
droVir3 scaffold_12970:5833613-5833909 - GT--AGCACTCATCCACTCA---TCATGACCCA---CTCACGGCTGCAGGACTATGCCAACCAACAGCAA---CA---GCAGCAGCAGCAGCAGCAGCA------ACA---ACAACA---ACAAGC---AG---------------CTGTTGCAGCCGC------T------GCTGCAGCGGCAGCAGCTGCCTCATATCATCGCTCCAATCCCACAAGCCCTACAACCATGCCGCAAACA-------------------TC---CGCTG------CACA---AAGCTACATTCTGCGCTATGGCGGCGGCGGTG------G---CGGCGGCGGTGGTGGTGGTGGTGGTGGTGGTGGTGTTGGTGCAGCTGCAGCT---------TCGGGTAGCAGCGGTA
droMoj3 scaffold_6473:15802466-15802723 + GT--GGCGCTCATCCGCTCA---TCATGACCCA---CTCGCGCCTGCAGGACTACGCCAGTCAGCAGCAG---CA---GCAACAGCAGCAACA------------ACA---ACAACA---GCAGGC---GG---------------CCTTGGCGAAC---------------GCTGCAGCGGCGGCTGCTGCCTCATATCATCGCTCCAATCCAACGAGCCCCACAACCTTGCCACAGACG-------------------TC---CG------CTGCACA---ATCGTACATTCTGCGCTACGGCGGCGGCGGCG------G---TGG----C-----------------------------------GCCGGAGCGAGCGCCCAGTCTGGCAGCAGCGGCA
droGri2 scaffold_14853:9451916-9452134 + GT--GGAGCCCATCCACTTA---TCATGACACA---CTCACGCATCCAGGACTATGCCATCCAACAGCAG---CA---GCAACAACA---GCA------------GCA---A---CAACAACAGGC---AG---------------CCGTTGCCGCCGC------T---------------GCAGCAGCTGCGTCATATCATCGATCGAATCCCACAAGTCCAACAACACTACCGCTAACA-------------------TC---CACGG---C---ACA---AACATACATTTTGCGTTGCAGCGGCG------------------------------------------------------------------------------CCGGTGGCGGTGGCG
droAna3 scaffold_13334:328403-328651 + GA--GGGACACATCCGCTGA---TCATGACGCA---CTCTCGCCTCCAGGACTACGCACTCCAGCAGCAG---CA---GCAGGCACA---GCA------------CC------AGCA---ACAAGC---AGCGGCCG---------CAGCAGCAGCTGC------T------GCAGCGGCGGCAGCAGCTTCCTCATATCATCGCTCGAATCCCACGAGTCCGACGACCATGCCACAGGTC-------------------TC---CGGAGCGGGTGGCCA---GAGCTATATCCTGCGCTATGGAGGTGGCGGCA------C------------------------------------------------CGG---C---------ACGGGCAGTAGCGGCA
droBip1 scf7180000396431:1211745-1211993 - GG--GGAACGCATCCGCTGA---TCATGACCCA---CTCACGCCTCCAGGACTACGCACTCCAGCAGCAG---CA---ACAGCAGC---AGCA------------CC------AACA---ACAAGC---AGCGGC---------------CGCGGCAGC------A------GCAGCAGCGGCGGCAGCTTCCTCATATCATCGCTCCAATCCCACGAGTCCGACGACCATGCCCCAGGTC-------------------TC---CGGAGCGGGTGGCCA---GAGCTATATCCTGCGCTACGGAGGCGGGGCAG------G----------C-----------------------------------GGCACCGGG---------ACCGGCAGCAGCGGCA
droKik1 scf7180000302544:10089-10316 - GT--GGAGCCCATCCACTGA---TCATGACGCA---CTCGCGTTTGCAGGATTACGCTATGCAGCAGCAG---CA---GCAGCA---------------------GC------AACA---ACAGGC---CGCGGC------------GGC---------------A------GCAGCAGCAGCAGCGGCAGCCTCATATCATCGCTCTAACCCAACGAGTCCCACCACCATGCCGCAGGTA-------------------TC---GGGAG---CGGGTCA---GAGCTACATAATGCGCTATGGCGGTGGA---------------------------------------------------------GCTGGAACA---------GCAGGCAGCAGTGGCA
droFic1 scf7180000454073:2136557-2136784 - GC--GGAGCCCATCCGCTGA---TCATGACGCA---CTCGCGGCTCCAGGACTTCGCCATCCAGCAGCAG---CA---GCA---------------------------------------ACAGGC---GG---------------CGGCGGC------G---------------GCGGCAGCGGCAGCAGCATCATATCATCGCTCCAATCCGACGAGTCCCACCACCATGCCACAGGTG-------------------GCAACCGGAGGAGCTGGCCA---GGGCTACATACTGCGCTACGGCGGCGGAGGAG------C----------T-----------------------------------GCCGGAGCA---------GCCGGCAGCAGCGGCA
droEle1 scf7180000491018:29245-29463 + GC--GGAGCCCATCCGCTGA---TCATGACGCA---CTCGCGACTCCAGGACTATGCCATCCAGCAGCAA---CA---GCAACAGCAGCAGCA------------GCA---GCAACA---ACAGG---------------------------------------------------------------CCGCCTCATATCATCGCTCCAATCCGACGAGTCCCACCACCATGCCTCAAGTG-------------------TC---CGGAG---CTGGCCAGCAGGGCTATATTCTGCGCTATGGCGG------AT------C----------GG-----------------------------GA---TCGGGAGCA---------GCTGGCAGCAGTGGCA
droRho1 scf7180000780067:117240-117470 - GC--GGAGCCCATCCGCTGA---TCATGACGCA---CTCGCGACTCCAGGACTACGCCATCCAGCAGCAG---CA---ACAGCAGC---AGCA------------GC------AACA---ACAGGC---GG---------------------C------GGCGGCA---------------GCGGCAGCAGCCTCATATCATCGCTCCAATCCGACGAGTCCCACCACCATGCCACAGGTG-------------------TC---CGGAG---CTGGCCA---GGGCTATATACTGCGCTACGGAGGCGGCGGAG------C----------G-----------------------------------GGTGGAGCA---------GCCGGCAGCAGTGGCA
droBia1 scf7180000301760:5194601-5194828 - GC--GGCGCGCATCCGCTAA---TAATGACGCA---CTCGCGCCTCCAGGACTATGCCATCCAACAGCAG---CA---GCAACA------GCA------------GC------AACA---ACAGGC---GG---------------------C------GGCGGCA---------------GCGGCAGTAGCCTCATATCATCGCTCCAATCCGACTAGTCCCACCACCATGCCACAGGTG-------------------TC---CGGCG---CCGGCCA---GAGCTATATAGTGCGCTACGGAGGCGGCGGAG------C----------G-----------------------------------GCTGGAGCC---------GGCGGCAGCAGTGGCA
droTak1 scf7180000414672:182763-183023 + GA--GGAGCCCATCCGCTGA---TAATGACGCA---CTCGCGACTCCAGGACTATGCCATCCAGCAGCAG---CA---GCAGCAG------------------------------CA---ACAAGCGGCAGCGGC---------------GGCGGCAGC------A---------------GCAGCAGCAGCCTCATATCATCGCTCCAATCCGACGAGTCCCACCACCATGCCGCAGGTG-------------------TC---CGGAG---CTGGCCAGCAGAGCTACATAGTGCGCTACGGAGGCGGCGGAG------C----------GGT--------TGGAGCAGTTGGAGCAGTTGGAGCGGCAGGAGCA---------GCCGGCAGCAGCGGCA
droEug1 scf7180000409032:735378-735602 + GA--GGAGCCCATCCGCTAA---TCATGACGCA---CTCGCGACTCCAGGATTATGCTATCCAGCAGCAG---CA---GCAGCA------ACA------------AC------AACA---ACAGGC---GGCGGC------------------------------A---------------GCGGCAGCGGCATCATATCATCGCTCCAATCCGACGAGTCCCACCACAATGCCACAAGTG-------------------TC---CGGAG---CTGGCCA---GAACTATATTCTGCGCTATGGAGGAGGAGGAG------C----------G-----------------------------------GCTGGTGCA---------GCCGGCAGCAGTGGCA
dm3 chrX:9221681-9221905 - GA--GGAGCACATCCGCTGA---TTATGACGCA---CTCGCGACTCCAGGACTACACCATCCAGCAGCAG---CA---GCAGCA------GCA------------GC------AACA---ACAGGC---GGCGGC------------------------------T---------------GCGGCAGCAGCCTCATATCATCGCTCCAATCCCACGAGTCCCACCACCATGCCACAGGTG-------------------TC---CGGAG---CTGGCCA---GAGCTATATACTGCGCTACGGAGGCGGCGGAG------C----------G-----------------------------------GTTGGAGCA---------GCCGGCAGCAGTGGCA
droSim2 3l:1082353-1082607 - GGACGCAGGAAGTCCGCTGAGCTCCATGACGGAGACCCTGCGCCGCCAGAT------CCTCTCGCAGCAGCAGCAACAGCAGC------AGCA------------CCA---CCAGCA---GCAGGC---G-CACCACCAGCAGCAGCCCTCGC---------------------ACCACCAACAGCAGTCGCCCCACGC----------------CCAGTC-CATGAACATGT-ACAAGTCCCCGGCCTATCTGCAGCGATC---CGAGA-------TCG---AAGATCAAGTATCCGCAGCGGCGGCCGTGGCA------G---C------G-----------------------------------GCGGCGG-----------CCAAGCACCAGCAGCA
droSec2 scaffold_68:112111-112329 - GT--GGAGCACATCCGCTGA---TTATGACGCA---CTCGCGACTTCAGGACTACACCATCCAGCAACAG---CA---GCAG------------------------C------AACA---ACAGGC---GGCGGC------------------------------T---------------GCGGCAGCAGCCTCATATCATCGCTCCAATCCGACGAGTCCCACCACCATGCCACAGGTG-------------------TC---CGGAG---CTGGCCA---GAGCTATATAGTGCGCTACGGAGGCGGCGGAG------C----------G-----------------------------------GCTGGAGCA---------GCCGGCAGCAGTGGCA
droYak3 X:17814789-17815025 - GA--GGAGCACATCCGCTGA---TCATGACGCA---CTCGCGACTCCAGGACTACACCATCCAGCAGCAG---CA---GCAGCAGCAACAGCA------------GCA---ACAACA---GCAGGC---AG---------------------C------GGCGGCT---------------GCGGCAGCAGCCTCATATCATCGCTCCAATCCGACGAGTCCCACCACCATGCCACAGGTG-------------------TC---CGGCG---CTGGCCA---GAGCTATATACTGCGCTACGGTGGCGGAGGAG------C----------G-----------------------------------GCCGGAGCA---------GCCGGCAGCAGTGGCA
droEre2 scaffold_4690:5897842-5898075 + GA--GGAGCCCATCCGCTGA---TAATGACGCA---CTCTCGACTCCAGGACTACACCATCCAGCAGCAA---CA---G---------------------------C------AACA---ACAGGC---GGCG---------------------------GCGGCTGCGGCAGCAGCAGCAGCAGCTGCAGCCTCATATCATCGCTCCAATCCGACGAGTCCCACCACCATGCCACAGGTG-------------------TC---CGGCG---CTGGCCA---GAGCTATATACTGCGCTACGGAGGCGGAGGAG------C----------G-----------------------------------GCTGGCGCA---------GCCGGCAGCAGTGGCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
GA--GGGACGCATCCGCTAA---TCATGACGCA---CTCGCGCCTGCAGGACTACGCGGTCCAGCAGCAG---CA---GCAGCAACAACAGCAGCAGCA------GCAGCAACAACA---GCAGGC---GG---------------CTGTGGC------G---------------GCGGCGGCAGCAGCTGCCTCATATCATCGCTCGAACCCCACGAGTCCCACGACCATGCCGCAGGCC-------------------TC---CACAA---TC--CCAGACGGGCTACGTGCTGCGCTACGGTAG------AG------C----------C-----------------------------------GCCGGAG--------------GGAGGCAGCGGCASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
............................................................................................................GCAACAACA---GCAGGC---GG---------------C...............................................................................................................................................................................................................................................................1811.001010000
...........ATCCGCTAA---TCATGACGCA---CTCGCGCCT.....................................................................................................................................................................................................................................................................................................................................................................2811.001100000
......................................................................................................................................................................................................................................................................................CAGACGGGCTACGTGCTG..........................................................................................................1811.001010000
.......................................................................................ACAGCAGCAGCA------GCAGCAAC.................................................................................................................................................................................................................................................................................................20200.051010000
.................................................................................GCAACAACAGCAGCAGCA------G........................................................................................................................................................................................................................................................................................................19200.051001000
................................................................................AGCAACAACAGCAGCAGCA------GC.......................................................................................................................................................................................................................................................................................................21200.051001000
.................................................................AGCAG---CA---GCAGCAACAACA........................................................................................................................................................................................................................................................................................................................19200.051000010
dp5
GA--GGGACGCATCCGCTAA---TTATGACGCA---CTCGCGCCTGCAGGACTACGCGGTCCAGCAGCAG---CA---GCAACAACAGCAGCAGCAGCAACAGCAGCA---ACACCA---GCAGGC---GG---------------CTGTGGC------G---------------GCGGCGGCAGCAGCTGCCTCATATCATCGCTCGAACCCCACGAGTCCCACGACCATGCCGCAGGCC-------------------TC---CACAA---C---CCAGACGGGCTACGTGCTGCGCTACGGTGG------AG------C----------C-----------------------------------GCCGGA---------------GGGAGCAGCGGCASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.................................................................................................................................................................................................................................................................................................................GG------AG------C----------C-----------------------------------GCCGGA---------------GGGAGCAGCGGC.2411.0010100000000
.............................................................................................................................................................................................................................................................................................................CGGTGG------AG------C----------C-----------------------------------GCCGGA---------------GGGAG........2111.0010100000000
.....................................................................................................AGCAGCA---ACACCA---GCAGGC---.................................................................................................................................................................................................................................................................................1911.0010010000000
..........................................................................................................................................................................................................................................................................................CGGGCTACGTGCTGCGCTACG...................................................................................................2111.0010100000000
.................................................................................................................................................................................................................................................................................C---CCAGACGGGCTACGTGCT...........................................................................................................1911.0010100000000
...........................................................................................................................................................................................................................................................................................................TACGGTGG------AG------C----------C-----------------------------------GCCGGA---------------GG...........2011.0010000100000
..............................................................................GCAACAACAGCAGCAGCAGCA...............................................................................................................................................................................................................................................................................................................21200.1020200000000
..............................................................AGCAGCAG---CA---GCAACAACAGCA........................................................................................................................................................................................................................................................................................................................22200.1020200000000
..........................................................................A---GCAACAACAGCAGCAGCAGCA...............................................................................................................................................................................................................................................................................................................22200.1020200000000
...................................................................................AACAGCAGCAGCAGCAACA............................................................................................................................................................................................................................................................................................................19200.0510100000000
...............................................................................CAACAACAGCAGCAGCAGCAAC.............................................................................................................................................................................................................................................................................................................22200.0510000000100
...................................................................CAG---CA---GCAACAACAGCAGCAGCAGCA...............................................................................................................................................................................................................................................................................................................26200.0510000001000
...............................................................GCAGCAG---CA---GCAACAACAGCA........................................................................................................................................................................................................................................................................................................................21200.0510100000000
.............................................................CAGCAGCAG---CA---GCAACAACAGCAGCAGCA..................................................................................................................................................................................................................................................................................................................29200.0510001000000
................................................................CAGCAG---CA---GCAACAACAGCAGC......................................................................................................................................................................................................................................................................................................................22200.0510100000000
..............................................................AGCAGCAG---CA---GCAACAACAGCAG.......................................................................................................................................................................................................................................................................................................................23200.0510000000100
..........................................................................................GCAGCAGCAACAGCAGCA---AC.................................................................................................................................................................................................................................................................................................20200.0510100000000
...................................................................CAG---CA---GCAACAACAGCAGCAGCAG.................................................................................................................................................................................................................................................................................................................24200.0510100000000
................................................................................AACAACAGCAGCAGCAGCAAC.............................................................................................................................................................................................................................................................................................................21200.0510010000000
.................................................................AGCAG---CA---GCAACAACAGCAGCAGC...................................................................................................................................................................................................................................................................................................................24200.0510100000000
...........................................................................................CAGCAGCAACAGCAGCA---ACA................................................................................................................................................................................................................................................................................................20200.0510000010000
.............................................................CAGCAGCAG---CA---GCAACAACAGCAG.......................................................................................................................................................................................................................................................................................................................24200.0510100000000
..................................................................GCAG---CA---GCAACAACAGCAG.......................................................................................................................................................................................................................................................................................................................19200.0510100000000
.....................................................................................CAGCAGCAGCAGCAACAGCAG........................................................................................................................................................................................................................................................................................................21200.0510000000010
droWil2
GT--GGGGCTCATCCTTTAA---TCATGACGCA---TTCGCGGCTGCAGGACTATGCAGCCCAGCAGCAA---CA---CCAACAACTTCAGCAGCAGCA------GC------AACA---ACAAGCGGTAG---------------CGGCTGCAGCTGC------T---------------GCGGCAGCAGCTTCATATCATCGCTCCAACCCCACAAGTCCCACAACAATGCCACAAACA-------------------TC---AGCC------GCTCA---AACCTATATACTACGTTATGGCGGCGGCGGAGGCGGCGGTGGC------G------------------GCGGTGGC---------ATTGGGGCA---------GCC---------GGCASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....................................................................................................................................................................................................................................ATGCCACAAACA-------------------TC---AGCC------G..............................................................................................................................1911.00101000
............................................................................................................................................................................................................................................AAACA-------------------TC---AGCC------GCTCA---AAC....................................................................................................................1911.00101000
.................................................................................................................AACA---ACAAGCGGTAG---------------CGGCT...........................................................................................................................................................................................................................................................2011.00100010
....................................................................................................................................................................................................................................................................................................................GGCGGAGGCGGCGGTGGC------G------------------GCGGT..............................................2411.00101000
GT--GGGGCTCATCCTTTAA---TCATGACGC..................................................................................................................................................................................................................................................................................................................................................................................2711.00101000
GT--GGGGCTCATCCTTTAA---TCATGACG...................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
.....................................................................................................................................................................................................................................................................................................CTACGTTATGGCGGCGGCGGAGG......................................................................................2311.00100010
...................................................................................AACTTCAGCAGCAGCA------GC------AACA---AC........................................................................................................................................................................................................................................................................................2411.00100100
...........................................................................................................................................................................................................................................................................................................TATGGCGGCGGCGGAGGC.....................................................................................1811.00100010
...................................................................CAA---CA---CCAACAACTTCAGCA.....................................................................................................................................................................................................................................................................................................................2011.00100010
...........................................................................................................................................................................................................................................................................................................TATGGCGGCGGCGGAGGCGGCGGTG..............................................................................2511.00100100
..................................................................................................................ACA---ACAAGCGGTAG---------------CGGCTGCAGCTGC------.............................................................................................................................................................................................................................................2711.00100010
..................................................................................................A------GC------AACA---ACAAGCGGTAG---------------CGGC............................................................................................................................................................................................................................................................2211.00100010
.........................................................................................................................................................................................................................................CACAAACA-------------------TC---AGCC------GCTCA---AACC...................................................................................................................2311.00100010
.................................................................................................................................................................................................................................................................................................................................................................GGTGGC---------ATTGGGGCA---------GCC---------GGC.2111.00100010
..........................................................................A---CCAACAACTTCAGCAGCAGCA------.........................................................................................................................................................................................................................................................................................................2220.50100010
..................................................................................................................................................................................................................................................................................................................GCGGCGGAGGCGGCGGTGGC------......................................................................2050.40201100
................................................................................AACAACTTCAGCAGCAGCA------G........................................................................................................................................................................................................................................................................................................2040.25100010
droVir3
GT--AGCACTCATCCACTCA---TCATGACCCA---CTCACGGCTGCAGGACTATGCCAACCAACAGCAA---CA---GCAGCAGCAGCAGCAGCAGCA------ACA---ACAACA---ACAAGC---AG---------------CTGTTGCAGCCGC------T------GCTGCAGCGGCAGCAGCTGCCTCATATCATCGCTCCAATCCCACAAGCCCTACAACCATGCCGCAAACA-------------------TC---CGCTG------CACA---AAGCTACATTCTGCGCTATGGCGGCGGCGGTG------G---CGGCGGCGGTGGTGGTGGTGGTGGTGGTGGTGGTGTTGGTGCAGCTGCAGCT---------TCGGGTAGCAGCGGTASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............................CCCA---CTCACGGCTGCAGGA...............................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................................................................................GCTACATTCTGCGCTATGGC.................................................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
................................................................................................GCA------ACA---ACAACA---ACAAGC---AG---------------CTGTT...........................................................................................................................................................................................................................................................2511.001000000000000000000000000000001000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................GCAGCT---------TCGGGTAGCAGCGGT.2111.001000000000000000000000000000000000000000000000000000000000000010
....................................................................................................................................................................................................TATCATCGCTCCAATCCCACA.........................................................................................................................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................CTACATTCTGCGCTATGGCGGCA.............................................................................................2311.001000000000000000000000000000000000000000000000000000000000000001
..................................................................................................................................................................................................CATATCATCGCTCCAATCCC............................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................ATTCTGCGCTATGGCGGCGGCGGT........................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
................................A---CTCACGGCTGCAGGACC.............................................................................................................................................................................................................................................................................................................................................................1811.001010000000000000000000000000000000000000000000000000000000000000
................CTCA---TCATGACCCA---CTCACGGCTG....................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000010000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................CAAGCCCTACAACCATGCCGCA.....................................................................................................................................................................2211.001000000000000000000010000000000000000000000000000000000000000000
............................ACCCA---CTCACGGCTGCAGGAC..............................................................................................................................................................................................................................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................ACAAGCCCTACAACCATGCCG.......................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................AGCTACATTCTGCGCTATGGCGGCGGC...........................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................ATATCATCGCTCCAATCCC............................................................................................................................................................................................1911.001000000000000000000000000000001000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................TG------G---CGGCGGCGGTGGTGGTGGT..........................................................2250.201000000000000000000000000000000000000000000000000000000000000010
.................................................................................................................................................................................................................................................................................................................................G---CGGCGGCGGTGGTGGTGGTGGTGG.....................................................2560.171000000000000000000000000000000000000000000000000000000000000010
.......................................................................................................................................................................................................................................................................................................................GGTG------G---CGGCGGCGGTGGTGGT.............................................................2160.171001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................GCGGCGGTGGTGGTGGTGGTGGTG...................................................2460.171001000000000000000000000000000000000000000000000000000000000000
............................................................................................AGCAGCA------ACA---ACAACA---ACAAGC---.................................................................................................................................................................................................................................................................................22120.081001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................G------G---CGGCGGCGGTGGTGGTGGT..........................................................21140.071001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................CGGCGGCGGTGGTGGTGGT..........................................................19170.061001000000000000000000000000000000000000000000000000000000000000
...............................................................................................AGCA------ACA---ACAACA---ACAAGC---A................................................................................................................................................................................................................................................................................20180.061000000000000000000000000000000000010000000000000000000000000000
............................................................CCAACAGCAA---CA---GCAGCAGCA...........................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000000000100000000000000000000000000
....................................................................AA---CA---GCAGCAGCAGCAGCA.....................................................................................................................................................................................................................................................................................................................19200.051000000000001000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................GGCGGCGGTGGTGGTGGT..........................................................18200.051001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................GTGGTGGTGGTGTTGGTA....................................18200.051001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................GGTGGTGGTGGTGGTGGTGGTGG............................................23200.051000000000000000000000000000000000000000000000000000000000000010
.................................................................................................CA------ACA---ACAACA---ACAAGC---AG---------------C...............................................................................................................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
...................................................................CAA---CA---GCAGCAGCAGCAGC......................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000000010000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................GTGGTGGTGGTGGTGGTGGTGGTGGT...........................................26200.051000000000000000000000000000000000000000000000000000000000000010
.............................................................................................................................................................................................................................................................................................................................................GTGGTGGTGGTGGTGGTGGTGG...............................................22200.051001000000000000000000000000000000000000000000000000000000000000
..................................................................GCAA---CA---GCAGCAGCAGCAGC......................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000000000000010000000000000000000000000000
....................................................................AA---CA---GCAGCAGCAGCAGCAGCAGC................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000000000000000100000000000000000000000000
...............................................................................CAGCAGCAGCAGCAGCAGC................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000000000000000000000000000000000010000
..........................................................................................................................................................................................................................................................................................................................................GCGGTGGTGGTGGTGGTG......................................................18200.051000000001000000000000000000000000000000000000000000000000000000
droMoj3
GT--GGCGCTCATCCGCTCA---TCATGACCCA---CTCGCGCCTGCAGGACTACGCCAGTCAGCAGCAG---CA---GCAACAGCAGCAACA------------ACA---ACAACA---GCAGGC---GG---------------CCTTGGCGAAC---------------GCTGCAGCGGCGGCTGCTGCCTCATATCATCGCTCCAATCCAACGAGCCCCACAACCTTGCCACAGACG-------------------TC---CG------CTGCACA---ATCGTACATTCTGCGCTACGGCGGCGGCGGCG------G---TGG----C-----------------------------------GCCGGAGCGAGCGCCCAGTCTGGCAGCAGCGGCASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
............................................................................................A------------ACA---ACAACA---GCAGGC---GG---------------CCT.............................................................................................................................................................................................................................................................2111.001000100
.........................................................CAGTCAGCAGCAG---CA---GCAACAGCAGC.........................................................................................................................................................................................................................................................................................................................2611.001100000
..........................................................................................ACA------------ACA---ACAACA---GCAGGC---GG---------------CC..............................................................................................................................................................................................................................................................2230.331000010
.........................................................................................AACA------------ACA---ACAACA---GCAGGC---GG---------------................................................................................................................................................................................................................................................................2130.331100000
............................................................TCAGCAGCAG---CA---GCAACAGC............................................................................................................................................................................................................................................................................................................................20200.102200000
..........................................................................A---GCAACAGCAGCAACA------------ACA---ACAACA---GCA.......................................................................................................................................................................................................................................................................................28200.051100000
droGri2
GT--GGAGCCCATCCACTTA---TCATGACACA---CTCACGCATCCAGGACTATGCCATCCAACAGCAG---CA---GCAACAACA---GCA------------GCA---A---CAACAACAGGC---AG---------------CCGTTGCCGCCGC------T---------------GCAGCAGCTGCGTCATATCATCGATCGAATCCCACAAGTCCAACAACACTACCGCTAACA-------------------TC---CACGG---C---ACA---AACATACATTTTGCGTTGCAGCGGCG------------------------------------------------------------------------------CCGGTGGCGGTGGCGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..................................................................................................................................................................................................................................................................................................ATTTTGCGTTGCAGCGGC..............................................................................................1811.00110
........................................................................................................................ACAGGC---AG---------------CCGTTGCCGCCGC------T---------------.............................................................................................................................................................................................................................2211.00110
..........................................................ATCCAACAGCAG---CA---GCAACA..............................................................................................................................................................................................................................................................................................................................2050.20110
..............................................................AACAGCAG---CA---GCAACAACA---........................................................................................................................................................................................................................................................................................................................19200.10220
..................................................................GCAG---CA---GCAACAACA---GCA------------GC.......................................................................................................................................................................................................................................................................................................20200.10220
...............................................................ACAGCAG---CA---GCAACAACA---GC......................................................................................................................................................................................................................................................................................................................20200.05110
....................................................................AG---CA---GCAACAACA---GCA------------GCA---A---C..............................................................................................................................................................................................................................................................................................21200.05110
.................................................................AGCAG---CA---GCAACAACA---GCA------------.........................................................................................................................................................................................................................................................................................................19200.05110
.............................................................CAACAGCAG---CA---GCAACAACA---GCA------------G........................................................................................................................................................................................................................................................................................................24200.05110
droAna3
GA--GGGACACATCCGCTGA---TCATGACGCA---CTCTCGCCTCCAGGACTACGCACTCCAGCAGCAG---CA---GCAGGCACA---GCA------------CC------AGCA---ACAAGC---AGCGGCCG---------CAGCAGCAGCTGC------T------GCAGCGGCGGCAGCAGCTTCCTCATATCATCGCTCGAATCCCACGAGTCCGACGACCATGCCACAGGTC-------------------TC---CGGAGCGGGTGGCCA---GAGCTATATCCTGCGCTATGGAGGTGGCGGCA------C------------------------------------------------CGG---C---------ACGGGCAGTAGCGGCASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.................................................................................................................................................................................................................................GACCATGCCACAGGTC-------------------TC---CGGAGC...................................................................................................................................2411.001010000
.........................................................................................................................................................................................................................................................................................................GCTATGGAGGTGGCGGCA------C------------------------------------------------CGG---C---------ACG.............2611.001010000
.............................................................................................................................................................................................................................................GGTC-------------------TC---CGGAGCGGGTGGCCA---GA.....................................................................................................................2311.001100000
...................A---TCATGACGCA---CTCTCGCCTCCAGGA...............................................................................................................................................................................................................................................................................................................................................................2611.001100000
...........................................................................................................................................................................................................GCTCGAATCCCACGAGTCCGAC.................................................................................................................................................................................2211.001010000
.........................ATGACGCA---CTCTCGCCTCCAGG................................................................................................................................................................................................................................................................................................................................................................2211.001100000
....................................................................................................................................................................................GGCAGCAGCTTCCTCATATCATCGCT....................................................................................................................................................................................................2611.001000001
droBip1
GG--GGAACGCATCCGCTGA---TCATGACCCA---CTCACGCCTCCAGGACTACGCACTCCAGCAGCAG---CA---ACAGCAGC---AGCA------------CC------AACA---ACAAGC---AGCGGC---------------CGCGGCAGC------A------GCAGCAGCGGCGGCAGCTTCCTCATATCATCGCTCCAATCCCACGAGTCCGACGACCATGCCCCAGGTC-------------------TC---CGGAGCGGGTGGCCA---GAGCTATATCCTGCGCTACGGAGGCGGGGCAG------G----------C-----------------------------------GGCACCGGG---------ACCGGCAGCAGCGGCASizeHit CountTotal NormTotal
No Reads
droKik1
GT--GGAGCCCATCCACTGA---TCATGACGCA---CTCGCGTTTGCAGGATTACGCTATGCAGCAGCAG---CA---GCAGCA---------------------GC------AACA---ACAGGC---CGCGGC------------GGC---------------A------GCAGCAGCAGCAGCGGCAGCCTCATATCATCGCTCTAACCCAACGAGTCCCACCACCATGCCGCAGGTA-------------------TC---GGGAG---CGGGTCA---GAGCTACATAATGCGCTATGGCGGTGGA---------------------------------------------------------GCTGGAACA---------GCAGGCAGCAGTGGCASizeHit CountTotal NormTotal
No Reads
droFic1
GC--GGAGCCCATCCGCTGA---TCATGACGCA---CTCGCGGCTCCAGGACTTCGCCATCCAGCAGCAG---CA---GCA---------------------------------------ACAGGC---GG---------------CGGCGGC------G---------------GCGGCAGCGGCAGCAGCATCATATCATCGCTCCAATCCGACGAGTCCCACCACCATGCCACAGGTG-------------------GCAACCGGAGGAGCTGGCCA---GGGCTACATACTGCGCTACGGCGGCGGAGGAG------C----------T-----------------------------------GCCGGAGCA---------GCCGGCAGCAGCGGCASizeHit CountTotal NormTotal
No Reads
droEle1
GC--GGAGCCCATCCGCTGA---TCATGACGCA---CTCGCGACTCCAGGACTATGCCATCCAGCAGCAA---CA---GCAACAGCAGCAGCA------------GCA---GCAACA---ACAGG---------------------------------------------------------------CCGCCTCATATCATCGCTCCAATCCGACGAGTCCCACCACCATGCCTCAAGTG-------------------TC---CGGAG---CTGGCCAGCAGGGCTATATTCTGCGCTATGGCGG------AT------C----------GG-----------------------------GA---TCGGGAGCA---------GCTGGCAGCAGTGGCASizeHit CountTotal NormTotal
No Reads
droRho1
GC--GGAGCCCATCCGCTGA---TCATGACGCA---CTCGCGACTCCAGGACTACGCCATCCAGCAGCAG---CA---ACAGCAGC---AGCA------------GC------AACA---ACAGGC---GG---------------------C------GGCGGCA---------------GCGGCAGCAGCCTCATATCATCGCTCCAATCCGACGAGTCCCACCACCATGCCACAGGTG-------------------TC---CGGAG---CTGGCCA---GGGCTATATACTGCGCTACGGAGGCGGCGGAG------C----------G-----------------------------------GGTGGAGCA---------GCCGGCAGCAGTGGCASizeHit CountTotal NormTotal
No Reads
droBia1
GC--GGCGCGCATCCGCTAA---TAATGACGCA---CTCGCGCCTCCAGGACTATGCCATCCAACAGCAG---CA---GCAACA------GCA------------GC------AACA---ACAGGC---GG---------------------C------GGCGGCA---------------GCGGCAGTAGCCTCATATCATCGCTCCAATCCGACTAGTCCCACCACCATGCCACAGGTG-------------------TC---CGGCG---CCGGCCA---GAGCTATATAGTGCGCTACGGAGGCGGCGGAG------C----------G-----------------------------------GCTGGAGCC---------GGCGGCAGCAGTGGCASizeHit CountTotal NormTotal
No Reads
droTak1
GA--GGAGCCCATCCGCTGA---TAATGACGCA---CTCGCGACTCCAGGACTATGCCATCCAGCAGCAG---CA---GCAGCAG------------------------------CA---ACAAGCGGCAGCGGC---------------GGCGGCAGC------A---------------GCAGCAGCAGCCTCATATCATCGCTCCAATCCGACGAGTCCCACCACCATGCCGCAGGTG-------------------TC---CGGAG---CTGGCCAGCAGAGCTACATAGTGCGCTACGGAGGCGGCGGAG------C----------GGT--------TGGAGCAGTTGGAGCAGTTGGAGCGGCAGGAGCA---------GCCGGCAGCAGCGGCASizeHit CountTotal NormTotal
No Reads
droEug1
GA--GGAGCCCATCCGCTAA---TCATGACGCA---CTCGCGACTCCAGGATTATGCTATCCAGCAGCAG---CA---GCAGCA------ACA------------AC------AACA---ACAGGC---GGCGGC------------------------------A---------------GCGGCAGCGGCATCATATCATCGCTCCAATCCGACGAGTCCCACCACAATGCCACAAGTG-------------------TC---CGGAG---CTGGCCA---GAACTATATTCTGCGCTATGGAGGAGGAGGAG------C----------G-----------------------------------GCTGGTGCA---------GCCGGCAGCAGTGGCASizeHit CountTotal NormTotal
No Reads
dm3
GA--GGAGCACATCCGCTGA---TTATGACGCA---CTCGCGACTCCAGGACTACACCATCCAGCAGCAG---CA---GCAGCA------GCA------------GC------AACA---ACAGGC---GGCGGC------------------------------T---------------GCGGCAGCAGCCTCATATCATCGCTCCAATCCCACGAGTCCCACCACCATGCCACAGGTG-------------------TC---CGGAG---CTGGCCA---GAGCTATATACTGCGCTACGGAGGCGGCGGAG------C----------G-----------------------------------GTTGGAGCA---------GCCGGCAGCAGTGGCASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
........................................................................................................................................................................................................................................CCACAGGTG-------------------TC---CGGAG---CTGGCCA---GA.....................................................................................................................2517.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................CGCA---CTCGCGACTCCAGGACT.............................................................................................................................................................................................................................................................................................................................................................2117.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000340000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................AG------C----------G-----------------------------------GTTGGAGCA---------GCCGGC..........1915.0050000000000000000000000000000000000000000000000000000000003200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................GA---TTATGACGCA---CTCGCGACTCCAGGACT.............................................................................................................................................................................................................................................................................................................................................................2914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............GCTGA---TTATGACGCA---CTCGCGACT.....................................................................................................................................................................................................................................................................................................................................................................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................ACACCATCCAGCAGCAG---CA---GCAGCA------G.......................................................................................................................................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................CGCGACTCCAGGACTACACCATCCAGC.................................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000002100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................TGCGCTACGGAGGCGGCGGAG------C----------G-----------------------------------..................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000100000000
....................................................................................................................................................................................................................................................................TC---CGGAG---CTGGCCA---GAGCTATATAC............................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................TGCGCTACGGAGGCGGCGGAG------C----------G-----------------------------------GTT...............................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................TATACTGCGCTACGGAGGCG.............................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................CACGAGTCCCACCACCATGCCACAGG...................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................TCCAGGACTACACCATCCAGCAGC..............................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TATGACGCA---CTCGCGACTCCAGGAC..............................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................TGGAGCA---------GCCGGCAGCAGTGGCA2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..........................................................................................................................................................................................................................................ACAGGTG-------------------TC---CGGAG---CTGGCCA---G......................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................GGAGCA---------GCCGGCAGCAGTGG..2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................GCGGAG------C----------G-----------------------------------GTTGGAGCA---------GCCGGCG.........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
...............................................................................................................................................................................................................................................TG-------------------TC---CGGAG---CTGGCCA---GAGC...................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................ATGCCACAGGTG-------------------TC---CGGAG---CTGGCCA---GAG....................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................GAG------C----------G-----------------------------------GTTGGAGCA---------GCCGGC..........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................................................................................................................................................................................................................................................................................................................................................................................GTTGGAGCA---------GCCGGCAGCAG.....2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................CACCACCATGCCACAGGTG-------------------TC---CGGAG---.................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................TATATACTGCGCTACGGAGGCGGC...........................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................ATGACGCA---CTCGCGACTCCAGGACT.............................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................ACAGGTG-------------------TC---CGGAG---CTGGCCA---GAGCT..................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................CCACGAGTCCCACCACCATGC.........................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................G------C----------G-----------------------------------GTTGGAGCA---------GCCGGCAGCA......2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................TATACTGCGCTACGGAGGCGGC...........................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
...................................................................................................................................................................................................................................................................................................TACTGCGCTACGGAGGCGGCG..........................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.......................TTATGACGCA---CTCGCGACTCCAGG................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CGCTGA---TTATGACGCA---CTCGCGAC......................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................GCA---CTCGCGACTCCAGGACTA............................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................ACA---ACAGGC---GGCGGC------------------------------T---------------GCGG.........................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
...........................GACGCA---CTCGCGACTCCAGGACT.............................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................GGAG------C----------G-----------------------------------GTTGGAGCA---------GCCGGC..........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................TCCAGGACTACACCATCCAGCAGCAG---C........................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................G------C----------G-----------------------------------GTTGGAGCA---------GCCGGCA.........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............GCTGA---TTATGACGCA---CTCG..........................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................G------C----------G-----------------------------------GTTGGAGCA---------GCCGGCAGCAGT....2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
......................................................................................................................................................................................................................................TGCCACAGGTG-------------------TC---CGGAG---CTGG.............................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................CACCATGCCACAGGTG-------------------TC---CGGAG---CT...............................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................GA---TTATGACGCA---CTCGCGACTCCAGGA...............................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................GCA------------GC------AACA---ACAGGC---GGCGGC------------------------------.............................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................CACCACCATGCCACAGGT..................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................GCA---CTCGCGACTCCAGGACT.............................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................CACCATCCAGCAGCAG---CA---GCAGCA------GCA------------.........................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TATGACGCA---CTCGCGACTCCAGGACG.............................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................CA---ACAGGC---GGCGGC------------------------------T---------------GCGGCAGCA....................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
....GGAGCACATCCGCTGA---TTATGA.....................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................C------AACA---ACAGGC---GGCGGC------------------------------T---------------GCGGCA.......................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
....................................................................................................................................................................................................................................CATGCCACAGGTG-------------------TC---CGGAG---CTA..............................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
....................................................................................................................................................................................................................................................................TC---CGGAG---CTGGCCA---GAGCTATATACT...........................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................A------GCA------------GC------AACA---ACAGGC---GGCGGC------------------------------T---------------.............................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................CAGGACTACACCATCCAGCAGCAG---CA---....................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................ATATACTGCGCTACGGAGG...............................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...............................CA---CTCGCGACTCCAGGACTC............................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................T---------------GCGGCAGCAGCCTCATATC..........................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........CATCCGCTGA---TTATGACGCA---C.............................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................TGACGCA---CTCGCGACTCCAGGA...............................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................TACTGCGCTACGGAGGCGGC...........................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................G-----------------------------------GTTGGAGCA---------GCCGGCAGCAGT....2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................GA---TTATGACGCA---CTCGCGACTC....................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................GGACTACACCATCCAGCAGC..............................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TATGACGCA---CTCGCGACTCCAGGA...............................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................GCTATATACTGCGCTACGGAGGCGGT...........................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................ATACTGCGCTACGGAGGCGGCGGAG------C----------G-----------------------------------..................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................AGGTG-------------------TC---CGGAG---CTGGCCA---G......................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................CACCATCCAGCAGCAG---CA---GCAG................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................CACCATCCAGCAGCAG---CA---GCAGCA------GCA------------GC------.................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................CACAGGTG-------------------TC---CGGAG---CTGGCCA---GAGCTA.................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................GC------AACA---ACAGGC---GGCGGC------------------------------T---------------GC...........................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................TC---CGGAG---CTGGCCA---GAGCTATAT..............................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TTATGACGCA---CTCGCGACTCCAGGA...............................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........CACATCCGCTGA---TTATGACGCA---CTCGC.........................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................ACTGCGCTACGGAGGCGGCG..........................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................GAG------C----------G-----------------------------------GTTGGAGCA---------GCCGGCAGCAG.....2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................GAG------C----------G-----------------------------------GTTGGAGCA---------GCCGGCAG........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TGA---TTATGACGCA---CTCGCGACTCCAG.................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................CCCACGAGTCCCACCACCATGCCACA.....................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.....................................................ACACCATCCAGCAGCAG---CA---GCAGCA------GCA------------.........................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................GTG-------------------TC---CGGAG---CTGGCCA---GAGC...................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............TCCGCTGA---TTATGACGCA---CTCGCGAC......................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................TACACCATCCAGCAGCAG---CA---GCAGCA------GCA------------.........................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................CAGGACTACACCATCCAGCAGCAG---CA---GC..................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................CA---GCAGCA------GCA------------GC------AACA---ACAGGC---GGC..............................................................................................................................................................................................................................................................................2620.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
................................................................................AGCA------GCA------------GC------AACA---ACAGGC---GGCG.............................................................................................................................................................................................................................................................................2320.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................TCCAGCAGCAG---CA---GCAGCA------GCA------------GC------.................................................................................................................................................................................................................................................................................................2470.4330000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................CATCCAGCAGCAG---CA---GCAGCA------........................................................................................................................................................................................................................................................................................................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
......................................................CACCATCCAGCAGCAG---CA---GCAAA...............................................................................................................................................................................................................................................................................................................................2340.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................CAGCA------GCA------------GC------AACA---ACAGGC---G................................................................................................................................................................................................................................................................................2150.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000
..........................................................ATCCAGCAGCAG---CA---GCAGCA------........................................................................................................................................................................................................................................................................................................................2090.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................CAGCAG---CA---GCAGCA------GCA------------GC------AACA---..........................................................................................................................................................................................................................................................................................23200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
GGACGCAGGAAGTCCGCTGAGCTCCATGACGGAGACCCTGCGCCGCCAGAT------CCTCTCGCAGCAGCAGCAACAGCAGC------AGCA------------CCA---CCAGCA---GCAGGC---G-CACCACCAGCAGCAGCCCTCGC---------------------ACCACCAACAGCAGTCGCCCCACGC----------------CCAGTC-CATGAACATGT-ACAAGTCCCCGGCCTATCTGCAGCGATC---CGAGA-------TCG---AAGATCAAGTATCCGCAGCGGCGGCCGTGGCA------G---C------G-----------------------------------GCGGCGG-----------CCAAGCACCAGCAGCASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.................................................................................................................................................................................................CCACGC----------------CCAGTC-CATGAACATGT-........................................................................................................................................................................2311.00101000000000000000
..................................................................................................................................................................................................................................AACATGT-ACAAGTCCCCG.............................................................................................................................................................1811.00100000100000000000
...................................................................CAGCAGCAACAGCAGC------AGCA------------CC.......................................................................................................................................................................................................................................................................................................22110.9110000001000000000000
...........................................................................................................A---CCAGCA---GCAGGC---G-C..............................................................................................................................................................................................................................................................................1540.25100000010000000000
..................................................................................................................GCA---GCAGGC---G-CACCA..........................................................................................................................................................................................................................................................................1570.14100000000001000000
droSec2
GT--GGAGCACATCCGCTGA---TTATGACGCA---CTCGCGACTTCAGGACTACACCATCCAGCAACAG---CA---GCAG------------------------C------AACA---ACAGGC---GGCGGC------------------------------T---------------GCGGCAGCAGCCTCATATCATCGCTCCAATCCGACGAGTCCCACCACCATGCCACAGGTG-------------------TC---CGGAG---CTGGCCA---GAGCTATATAGTGCGCTACGGAGGCGGCGGAG------C----------G-----------------------------------GCTGGAGCA---------GCCGGCAGCAGTGGCASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................................................................................................................................................................................................................................................................................................................................................................................GGAGCA---------GCCGGCAGCAGTGGC.2111.0010100
................................................................................................................................................................................................................................................G-------------------TC---CGGAG---CTGGCCA---GAGC...................................................................................................................1911.0010010
...................................................................................................................CA---ACAGGC---GGCGGC------------------------------T---------------GCGGCAGCA....................................................................................................................................................................................................................2411.0010010
.................................................................................G------------------------C------AACA---ACAGGC---GGCGGC------------------------------T---------------GCGGCAG......................................................................................................................................................................................................................2611.0010010
....................................................................................................................................................................................................................................CATGCCACAGGTG-------------------TC---CGGA.....................................................................................................................................1911.0011000
...............................................................GCAACAG---CA---GCAG------------------------C------AACA---..........................................................................................................................................................................................................................................................................................18200.1020020
.............................................................CAGCAACAG---CA---GCAG------------------------C------AACA---AC........................................................................................................................................................................................................................................................................................22200.0510010
................................................................CAACAG---CA---GCAG------------------------C------AACA---ACA.......................................................................................................................................................................................................................................................................................20200.0510010
droYak3
GA--GGAGCACATCCGCTGA---TCATGACGCA---CTCGCGACTCCAGGACTACACCATCCAGCAGCAG---CA---GCAGCAGCAACAGCA------------GCA---ACAACA---GCAGGC---AG---------------------C------GGCGGCT---------------GCGGCAGCAGCCTCATATCATCGCTCCAATCCGACGAGTCCCACCACCATGCCACAGGTG-------------------TC---CGGCG---CTGGCCA---GAGCTATATACTGCGCTACGGTGGCGGAGGAG------C----------G-----------------------------------GCCGGAGCA---------GCCGGCAGCAGTGGCASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........................................................................................................................................................................................................................................................................GGCG---CTGGCCA---GAGCTATATACTGCG........................................................................................................2611.00101000000000
.....................................................................................................................................................................................................................GACGAGTCCCACCACCATGCCACA.....................................................................................................................................................................2411.00100100000000
.....................................................ACACCATCCAGCAGCAG---CA---....................................................................................................................................................................................................................................................................................................................................1911.00100010000000
...................................................CTACACCATCCAGCAGCAG---CA---GCA.................................................................................................................................................................................................................................................................................................................................2411.00101000000000
...........................................................................................................................................................................................................................................CAGGTG-------------------TC---CGGCG---CTGGCCA---G......................................................................................................................2111.00101000000000
...................................................................................................................CA---GCAGGC---AG---------------------C------GGCGGCT---------------GCGGCA.......................................................................................................................................................................................................................2411.00101000000000
..........................................................................................................................................................................................................................................ACAGGTG-------------------TC---CGGCG---CTGGCCA---GAG....................................................................................................................2411.00100000010000
...............................................................GCAGCAG---CA---GCAGCAGCAAC.........................................................................................................................................................................................................................................................................................................................20200.10202000000000
............................................................CCAGCAGCAG---CA---GCAGCAGCAACAGC......................................................................................................................................................................................................................................................................................................................26140.07101000000000
.................................................................AGCAG---CA---GCAGCAGCAACAGCA------------GCA---...................................................................................................................................................................................................................................................................................................25200.05101000000000
droEre2
GA--GGAGCCCATCCGCTGA---TAATGACGCA---CTCTCGACTCCAGGACTACACCATCCAGCAGCAA---CA---G---------------------------C------AACA---ACAGGC---GGCG---------------------------GCGGCTGCGGCAGCAGCAGCAGCAGCTGCAGCCTCATATCATCGCTCCAATCCGACGAGTCCCACCACCATGCCACAGGTG-------------------TC---CGGCG---CTGGCCA---GAGCTATATACTGCGCTACGGAGGCGGAGGAG------C----------G-----------------------------------GCTGGCGCA---------GCCGGCAGCAGTGGCASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..........................................................................................................................................................................................................................................ACAGGTG-------------------TC---CGGCG---CTGGC............................................................................................................................1911.0011000000
.................................................................................................................................................................................................................................................................................................................................................................................CTGGCGCA---------GCCGGCAGCAGTGGCA2411.0011000000
..............................................................................................................................................................................................................................................................................................CTATATACTGCGCTACGGA.................................................................................................1911.0010000010
.................TGA---TAATGACGCA---CTCTCGACTCCAGGAC..............................................................................................................................................................................................................................................................................................................................................................2911.0011000000
................................................................................................................................................................................................................................................................................................ATATACTGCGCTACGGAGGCG.............................................................................................2111.0011000000
....................................................................AA---CA---G---------------------------C------AACA---ACAGGC---GGCG---------------------------GC................................................................................................................................................................................................................................................2211.0011000000
.................................................................................................................................................................................................................................................................................................TATACTGCGCTACGGAGGC..............................................................................................1911.0010000010
......................................CTCGACTCCAGGACTACACCATCCAGC.................................................................................................................................................................................................................................................................................................................................................2711.0011000000
......................................................................................................................................................................................................................................................................................................TGCGCTACGGAGGCGGAGGAG------C----------G-----------------------------------GCT...............................2611.0011000000
..................................................................................................................................................................................................................TCCGACGAGTCCCACCACCATGCCA.......................................................................................................................................................................2511.0011000000
.......................................................................................................................................................................................................................................GCCACAGGTG-------------------TC---CGGCG---CTGGC............................................................................................................................2211.0011000000

Generated: 06/08/2015 at 03:12 PM