ID:

dpe_781

 Coordinate:

scaffold_15:15222-15372 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-29.6 -29.5 -29.5

Flybase annnotation

exon [dper_GLEANR_18158:1]; CDS [Dper\GL16503-cds]; intron [Dper\GL16503-in]

Repeatable elements

NameClassFamilyStrand
Helitron-2N1_DVirRCHelitron+
Hopers2DNAhAT-hobo-
mature
  1. dpe_781  scaffold_15:15233-15254 -
  2. scaffold_1356:1400-1421 +
  3. scaffold_95:41903-41924 +
  4. scaffold_1785:3810-3831 -
  5. scaffold_6472:914-935 -
star
  1. scaffold_55:42751-42771 -
  2. scaffold_55:68288-68308 -
  3. scaffold_168:14615-14635 -
  4. scaffold_6:589560-589580 -
  5. scaffold_78:94030-94050 -
  6. scaffold_4:6259722-6259742 -
  7. scaffold_5:4219414-4219434 -
  8. scaffold_83:46231-46251 -
  9. dpe_781  scaffold_15:15350-15370 -
  10. scaffold_16:944447-944467 -
  11. scaffold_87:84220-84240 -
  12. scaffold_28:551959-551979 -
  13. scaffold_49:555782-555802 -
  14. scaffold_51:49968-49988 -
  15. scaffold_51:503072-503092 -
  16. scaffold_114:476-496 -
  17. scaffold_2845:1438-1458 -
  18. scaffold_3536:689-709 -
  19. scaffold_4970:1964-1984 -
  20. scaffold_392:10130-10150 -

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TGGATGCCACGGAAAAGGGCGGAGCAAAGTTTTGGAATACACTTGTAAGGGTGAGATCTAACAGGAGTGTGGACACAAAATTTGGTTGCTCTAGCTCTTATAGTCTCTGAGCACTATGCGCTCATAGGGGCGGACAGACAGACAGGGCTCAATCGACTCGGCTATTGATGCTGATCAAGAATATATAAGTAAAGATTGGGTATTAGTTGAGTAGTGAATTTATATCAATATCAACTTTATTAAGCCCGCAA
****************************************************((((.(((..((((((.((((.((........))...)))))))))).)))))))(((((.((...(((((....)))))............)))))))...((.(((((.......)))))))..............************************************************************* 		Read size # Mismatch Hit Count Total Norm Total V057
head
 M042
female body
 V111
male body		 M021
embryo
...............................................AGGGTGACATGTAACAGCAGT....................................................................................................................................................................................... 21 3 1 1.00 1 1 0 0 0
.........................................................................................................................TCATAGAGGCGGACAGACAGAC............................................................................................................ 22 1 3 0.33 1 0 1 0 0
........................................................................................................................................................................TGCTGATCAAGAATATATAAGT............................................................. 22 0 5 0.20 1 0 1 0 0
....................................................GAGATCTAACAGGAGTGTGGA.................................................................................................................................................................................. 21 0 20 0.10 2 0 0 2 0
...........................................................................................TAGCTCTTATAGTCTCTGAGC........................................................................................................................................... 21 0 20 0.05 1 0 0 0 1
...........................................................................................TAGCTCTTATAGTCTCTGAGCAC......................................................................................................................................... 23 0 20 0.05 1 0 1 0 0

Anti-sense strand reads

ACCTACGGTGCCTTTTCCCGCCTCGTTTCAAAACCTTATGTGAACATTCCCACTCTAGATTGTCCTCACACCTGTGTTTTAAACCAACGAGATCGAGAATATCAGAGACTCGTGATACGCGAGTATCCCCGCCTGTCTGTCTGTCCCGAGTTAGCTGAGCCGATAACTACGACTAGTTCTTATATATTCATTTCTAACCCATAATCAACTCATCACTTAAATATAGTTATAGTTGAAATAATTCGGGCGTT
*************************************************************((((.(((..((((((.((((.((........))...)))))))))).)))))))(((((.((...(((((....)))))............)))))))...((.(((((.......)))))))..............**************************************************** 		Read size # Mismatch Hit Count Total Norm Total V111
male body		 M042
female body
.........................................................................................................................................................GCTGAGCCGATAACTACGACTAGTTC........................................................................ 26 0 20 1.25 25 0 25
...................................................................................................................................................GAGTTAGCTGAGCCGATAAC.................................................................................... 20 0 20 1.20 24 24 0
.........................................................................................................................................................GCTGAGCCGATAACTACGACTAGTT......................................................................... 25 0 20 0.60 12 12 0
.................................................................................................................................CGCCTGTCTGTCTGTCCCGAGT.................................................................................................... 22 0 8 0.25 2 0 2
................................................................................AAACCAACGAGATCGAGAATAT..................................................................................................................................................... 22 0 20 0.05 1 0 1
..................................................................................ACCAACGAGATCGAGAATATCAGA................................................................................................................................................. 24 0 20 0.05 1 0 1
.................................................................................AACCAACGAGATCGAGAATATCAGAGA............................................................................................................................................... 27 0 20 0.05 1 0 1
.................................................................................AACCAACGAGATCGAGAATATCAGAG................................................................................................................................................ 26 0 20 0.05 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_15:15172-15422 - dpe_781 TGGATGCCACGGAAA-------------------------AGGGCGGAGCAAAGTTTTGGAATACACTTGTAAGGGTGA-GATCTAACAGGAGTGTGGACACAAAATTTGGTTGCTCTAGCTCTTATAGTCTCTG-AGCACTATGCGCTCATAGGGGCGGAC--------A----GACAGACAG-GGCTCAATCGACTCGGCTATTGATG-----CTGATCAAGAA-------------TATATAA---------G-----------------TAAAGATTGGGT-------------ATT----AGTT--GAGTAGT---------GAATTTATATCAATATCAAC---------------------------------------------------------TTTAT---TAAGCCCGCAA-----
dp5 XL_group1a:7668788-7668987 - TGGATGCCACGGAAA-------------------------AGGGCGGGGCAAAGTTTTGGAATACACTTGTAAGAGCGA-GATCTAACAGGAGTGTGGACACAAAATTTGGTTGCTCTAGCTCTTATAGTCTCTG-AGCACTATGCGCTCATAGGGACGGAC--------A----GACAGACAG-GGCTCAATCGACTCGGCTATTGATG-----CTGATCAAGAA-------------TATATAA---------G-----------------TAAAGATTAGG------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004949:1789275-1789480 + CGGA---------AG-------------------------GGGGCGTGGCAAAAATTTGAAACAAACTCGATAAGTGTACA-TACTACACGAGACTGCATACCAAATTTGGTGGCTCTAGCTCTTATAGTCTCCG-AGATCTAGGTGTTCATACGGACGGAC--------AA-----GGTATAG-GCTTAAATTGACGGATCTGAAG--T-----TAGATTTGAT------------------------------------------------------------------------------------------AAT-----------------------------------------------------------CATAAATAAATAATTAGGTGAGTA---ATTTT---TA-TAC----C-----
droVir3 scaffold_12961:77783-77983 - GGAA---------A--------------------------AGAAATGATCAATTTTCGGAAACAAACTCTATCTGCGTATG-TTCTAAGAGGACCTACA-GCTAAATTTCAAATCTCTAGATTTTATAGTTACTA-TGATCCTTGCGTTCATACATACGGACGGACGGACAGACAGACTGGCAT-GGCTGGATCGACTACGGTCTTGATG-----CTGATAAACAA-------------TATATAT---------A-----------------TACCTAATGGG------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6500:30227389-30227559 - GAG-----------------------------------------TCGAGCAAAATAT---GATAAGCTTGTACTGG-TATG-GTATACACGAATCTTCAAGCAAAATTTCAGCTCTATAGCTCTTATAATTTTTG-AGATCTACGCGTTCATACGGACGGAC--------GGAAAGACGGACAG-GGCTATATCGACTCAGCTCGTCGTC-----CTGATCAAGAA-------------TATATA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15074:6359522-6359687 - AGGGCA--------------------------------------GTTAGCGAAATTTTAAAATGAAACTAAAATG-----------------ATCAGCGTGTGGAATACCAAAACCAAATTGCTTATAGACTCAG-AGATC-----GCTCATACAAACC----------------GATGGATAT-GTTTAGATCGACTCGGCTAATGATG-----CTGATCAAGAA-------------TATACAT---------A-----------------TATAAGTTATGT-------------CT--------------------------------------------------------------------------------------------------------------------------T-----
droAna3 scaffold_13250:1637605-1637823 + AAG-------------------------------------AGGGCATGGCAAAAATTTTAAACAAACTTAACCTGCCCATC-ATTCACAGGAGTTTTTGATCAAAATTTTATAGCACTATCGCTAATAGACTCGGAAGATCCACATGTTCATACGGATAGAT--------ATATAGACGGACAA-GGCTATATCGACTCGGCTGTTGATG-----CTGATCAAGAC-------------TATATAT---------T-----------------CTCTGGATATG----------AGTTACACATGAATTGA-----------------------CATGA-----------------------------------------------------------------------------------ACAT--
droBip1 scf7180000395239:55775-56005 - CGGG---------AG-------------------------GGGGCGTGGCAACATTTTGAAACAAACTTGAACTACGTGGA-CATTGACGGAGTATCCATGCCAAACCCTATAGCTATATCTCTTATAGTCTTTC-AGATCGACGCGTTCATACGGACGGAC--------CA----ACGGACAGGGGCTATATCGACTTGGCTGTTGACG-----CTGATCAATAG-------------C-TATAG------CTT-AAATA------TAAGAT-------T-----------------ATA-------T--AAATGAT---------GATTCCTTCTCTATGTTAAA---------------------------------------------------------TACAT-------------T-----
droKik1 scf7180000302690:382078-382298 - AAT--------------------------------------------------GTTATCAAATTCACTTCCGAGTGGAA-ACTAGAACAGGCCTGTATATGCAAAGTTTCATTCAGATAACTGTAAAACTGAGGG-ACTAGTTTGCGTTGAAACGG----------------ACAGACGGACAT-GGCTAGATCGACTCGGCTGTTGATG-----CTGACCAGGAA-------------TATGTGC-GGTAGTTT-ACAGAAT----TAAGAT-------TAG-----------TGTGACC--------------AAT---------TAGGAAATATCAAAAATATA---------------------------------------------------------TTTTT---TA--------A-----
droFic1 scf7180000453932:622038-622145 + ------------------------------------------------------------------------------------------------------------------------CTTTTATAATTTCCG-AGAATTTGACGTTCATACGGACGGAC--------AGA----CAGACAT-ACATAGATCGACTCGTCCAATGAGT-----CTGATCAGAAA-------------TACAGAC---T-----AAAGAAG-----------------TTGGGT-----------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000490245:7896-8088 + G-----------------------------------------------------TTTTAAAATAAACTTGAAATAA------AATGACTCGAATCTGCATCCCAAAT-------CTCTAGCTTTTATAGTTT-----------------CATTCGGACGGAC--------TGACAAAC--ATAT-GGCTAGATCGACTCGGCTATTGATC-----CTGATCAAGTA-------------TATATTT---------A-ACTCG----------------CTTGGTT-------------ATT----TATT--GACAAGA---------------------------------------------------------------AATCTGTTTGTAA---AGTTAACTTAGC---AAAGGC----C-----
droRho1 scf7180000769384:19841-20083 - TGGGCGTCAG---AG-------------------------GGGGCGTGGCACCATTTTGAAACAAACTTGCGCTGCGTAGG-AACTCCTAAAATCTACATGCAAAATGTCAATCTTCTAGCTTTTATAGTTTCCG-AGATCTCAGCGTTCATACGGACAGAC----AGACGGACAGACGGACAT-GGCTTGATCGACTCGGCTAGTGATC-----CTGAACAAGAA-------------TATATAT---------A-----------------CTTT--ATAG-----------------------------------------------------------------------GGTCGGAAACTAGAGTTGTTGATAATATATCAAAATATCA----------------------------A-----
droBia1 scf7180000299946:3765-3991 - TAGGCGCTACAGATT--------------TTCGCGGAATGTGGGCGTGGCA----TCTGAAACAAACTTGCGCTGCGTAGG-AAGCCCAGGAATATGCATGCCAAGTCTGACGGTTCTACCTTTTATAGTTTCCG-AGATCTCAGTGTTCATACGGACGGAC--------GGACAGATGGACAT-GGCTAGATCGACTCGGCTAGTGATC-----TTGATGACAAT-------------TCA---------------AGAAG----------------GTTGGGG-------------GGT----TGAT--GAGAA-T---------GATTTT-----------------------------------------------------------------------------------------A-----
droTak1 scf7180000413405:3426-3643 - TGGGCGTTAG---AG-------------------------GGGGCGTGGCACCCTTTTGAAACAAACTTGCGCTGCGTAGG-AACTCCTAGAGTCTGCATGCAAAATGTCAATCTTCTAGCTTTTATAGTTTCCG-AAATCTCAGCGTTCATACGGACAGAC--------AGACAGACGGACAT-GGCTATATCGACTCGGCTAGTGACC-----CTGATCAAGAA-------------TATATAT---------AGG---------------GAAGTGTAGGGTAATTTGACGAGTAG---------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000408984:732418-732664 + G-----------------------------------------GGTGTGGCAGGATGCTGAAATAAACTTGCGCTGTCCAGG-GACCTCAAGAATCTTCATGTTTAATCTCAACATTGTATCTCTTATAGTTCCTG-AGATCTCAGCGTTCATATGGACGGAC--------GGGCAGACGGACAT-GGCTCAATAGACTTCGCTATTGAAT-----T-----ATAAT-------------TA---------------AAAAAATTATGCA--AGCAGAAACAATG---------------------TGTA--TAATTTTATCAGCGCCTAGTTCATTTCTAG--AATC---------------------------------------------------------TGCATTTTTAGTCC--CAA-----
dm3 chr2L:21346288-21346487 - T-------------------------------------------------------TTGAAATAAACTTGCACTGCGCCTA-TGTCTCTAGAATCTTTATGCTTAATCTCAACCTTCTAGCTTTTATAGTTTTTG-AGATCTCGGCGTTCATATGGACGCATAGACATTCGAGCAGACAGACAG-GGACATATAGACTCGGCTATTGATC-----CTGATCATAAC-------------CTTTGAC------------------------------------------TCTACGAGTAACGGATATATAAA-----------------------TATCA-----------------------------------------------------------------------------------AC----
droSim2 3r:331306-331476 + G------------------------------------------GCGTGGCAAAATGGGTCAACAAACTTGT-CTGCGTCTT--ATCTCTAGAATCTGTACGCTGAATCTCAACCTTCTAGCTTTTATAGTTCCTG-AGATCTCGATGTTCTTACGGACA----------------GACGGACAT-GGCTAAATCGATTCGGCTATTGATC-----CCGATCAAGAA-------------TTTATAT---------A-----------------TATAG------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_7:326330-326520 + G------------------------------------------------------------------------------------------AATCTGTATGCAGAATCTTA-CCTTCTAGCTTTTATAGTTCCTG-AGATCTCGACGTTTATACGGACA----------------GACGAAAAT-GGCTAGATCGATTCGGCTATTGATC-----CTGATCATGAA-------------TATATACCTAT-----AATATAT----ATA--AG-------T-----------------ATA----TATA--TAATAATATATATACATA----ATATATATATACACTTTATATAGTCGG------------------------------------------------------------AAA-----
droYak3 3R:619952-620168 + GAAA---------AAAAAATTGAAACATTTTTAAAAAGGGTGGGCGTGGCATCATG---------------------------------------TGGGCGTGGAAACTCAACTTTCTAGC--TTGTAGTTTCTG-AGATCTCGACGTTAATACGGACGGCC----AGACAGACGGACGGACAT-GGCCAGATCGACTCGGCTATTGTTC-----CTGGTCGGAACAATCTAGTATACCCTTTT----------------------------------AC--------TGGACGAGTAACAGGT--ATAAA-----------------------TATCA-----------------------------------------------------------------------------------GTATCA
droEre2 scaffold_4843:66805-67046 + AA--------------------------------------TGGGCGTGGCAACATTTGGAAATAAACTTGCCGTACGTCTA-TGTCTCTGGAAGTTACATGCTTAATCTCAACATTCTACCTTTTTTAGTTCCTG-AGATCCAGGCGCTCATATAGACGAAC--------GGACAGACGGACAT-GGCT--ATCGACTTGGCTATTAATGAACACTTCCTCAAGAA-------------TATATAA---T-----AACCTTT----------------TTAGGTG-------------ATT----AATT--TAATAAAAAA-AT---ATATTTTTATTTTTATAATC---------------------------------------------------------TTTAT-------------T-----

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
TGGATGCCACGGAAA-------------------------AGGGCGGAGCAAAGTTTTGGAATACACTTGTAAGGGTGA-GATCTAACAGGAGTGTGGACACAAAATTTGGTTGCTCTAGCTCTTATAGTCTCTG-AGCACTATGCGCTCATAGGGGCGGAC--------A----GACAGACAG-GGCTCAATCGACTCGGCTATTGATG-----CTGATCAAGAA-------------TATATAA---------G-----------------TAAAGATTGGGT-------------ATT----AGTT--GAGTAGT---------GAATTTATATCAATATCAAC---------------------------------------------------------TTTAT---TAAGCCCGCAA-----SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................................................................................................................................................................................................................TG-----CTGATCAAGAA-------------TATATAA---------G-----------------T..........................................................................................................................................................2250.201010000
.............................................................................GA-GATCTAACAGGAGTGTGGA.........................................................................................................................................................................................................................................................................................................................................21200.102000002
.....................................................................................................................TAGCTCTTATAGTCTCTG-AGC.................................................................................................................................................................................................................................................................................................21200.051100000
.....................................................................................................................TAGCTCTTATAGTCTCTG-AGCAC...............................................................................................................................................................................................................................................................................................23200.051010000
dp5
TGGATGCCACGGAAA-------------------------AGGGCGGGGCAAAGTTTTGGAATACACTTGTAAGAGCGA-GATCTAACAGGAGTGTGGACACAAAATTTGGTTGCTCTAGCTCTTATAGTCTCTG-AGCACTATGCGCTCATAGGGACGGAC--------A----GACAGACAG-GGCTCAATCGACTCGGCTATTGATG-----CTGATCAAGAA-------------TATATAA---------G-----------------TAAAGATTAGG------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
................................................................................................................................................................................................................TG-----CTGATCAAGAA-------------TATATAA---------G-----------------T..........................................................................................................................................................2230.6720200000000
...........................................................................................................................TTATAGTCTCTG-AGCACTATGCG.........................................................................................................................................................................................................................................................................................2320.5010000100000
...........................................................................................................................TTATAGTCTCTG-AGCACTATGC..........................................................................................................................................................................................................................................................................................2220.5010100000000
...........................................................................................................................................................GACGGAC--------A----GACAGACAG-GGCTC..............................................................................................................................................................................................................................................22200.2040000000400
.......................................................................................................................................................TAGGGACGGAC--------A----GACAGACAG-...................................................................................................................................................................................................................................................21200.1530000000030
.......................................................................................................................................................TAGGGACGGAC--------A----GACAGACAG-GG.................................................................................................................................................................................................................................................23200.1530000000300
.......................................................................................................................................................TAGGGACGGAC--------A----GACAGACAG-G..................................................................................................................................................................................................................................................22200.1530000003000
.................................................................................................................................................................................CAGACAG-GGCTCAATCGACTCGGCT.................................................................................................................................................................................................................................25200.1020200000000
.........................................................................................................................TCTTATAGTCTCTG-AGCACTA.............................................................................................................................................................................................................................................................................................21200.0510100000000
....................................................................................................................................................TCATAGGGACGGAC--------A----GACAGA.......................................................................................................................................................................................................................................................21200.0510000000100
.........................................................................................................................TCTTATAGTCTCTG-AGCACTT.............................................................................................................................................................................................................................................................................................21200.0510100000000
..............................................................................................................................................................GGAC--------A----GACAGACAG-GGCTCAATCG.........................................................................................................................................................................................................................................24200.0510100000000
....................................................................................................................CTAGCTCTTATAGTCTCTG-AG..................................................................................................................................................................................................................................................................................................21200.0510100000000
...............................................................................................................................................................GAC--------A----GACAGACAG-GGCTCAAT...........................................................................................................................................................................................................................................21200.0510000001000
................................................................................GATCTAACAGGAGTGTGGA.........................................................................................................................................................................................................................................................................................................................................19200.0510100000000
................................................................................................................................................GCGCTCATAGGGACGGAC--------A----.............................................................................................................................................................................................................................................................19200.0510100000000
..................................................................................................................................................................................AGACAG-GGCTCAATCGACTCGGCTA................................................................................................................................................................................................................................25200.0510100000000
.....................................................................................................................................................CATAGGGACGGAC--------A----GACAGACA.....................................................................................................................................................................................................................................................22200.0510100000000
.......................................................................................................................................................TAGGGACGGAC--------A----GACAGAC......................................................................................................................................................................................................................................................19200.0510000000010
...........................................................................................................TTGGTTGCTCTAGCTCTTATAGTCTC.......................................................................................................................................................................................................................................................................................................26200.0510100000000
...........................................................................................................................................................GACGGAC--------A----GACAGACAG-GGCTCAAT...........................................................................................................................................................................................................................................25200.0510100000000
..................................................................................................................CTCTAGCTCTTATAGTCTCTG-AGCA................................................................................................................................................................................................................................................................................................25200.0510100000000
....................................................................................................................................................TCATAGGGACGGAC--------A----GACAG........................................................................................................................................................................................................................................................20200.0510000000010
...........................................................................................................................................................GACGGAC--------A----GACAGACAG-GGC................................................................................................................................................................................................................................................20200.0510000000001
droWil2
CGGA---------AG-------------------------GGGGCGTGGCAAAAATTTGAAACAAACTCGATAAGTGTACA-TACTACACGAGACTGCATACCAAATTTGGTGGCTCTAGCTCTTATAGTCTCCG-AGATCTAGGTGTTCATACGGACGGAC--------AA-----GGTATAG-GCTTAAATTGACGGATCTGAAG--T-----TAGATTTGAT------------------------------------------------------------------------------------------AAT-----------------------------------------------------------CATAAATAAATAATTAGGTGAGTA---ATTTT---TA-TAC----C-----SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....................................................................................TACACGAGACTGCATACCAAATTTGG.............................................................................................................................................................................................................................................................................................................................26200.9519019000
..................................................................................TACTACACGAGACTGCATACC.....................................................................................................................................................................................................................................................................................................................................21200.501080002
....................................................................................................................................................................................................CGGATCTGAAG--T-----TAGATTTGAT------------------------------------------------------------------------------------------AA...............................................................................................................2440.50202000
...................................................................................................................TCTAGCTCTTATAGTCTCCG-AGAT................................................................................................................................................................................................................................................................................................24200.20404000
.............................................................................................................................................TAGGTGTTCATACGGACGGAC--------..................................................................................................................................................................................................................................................................21200.15303000
....................................................................................CTACACGAGACTGCATACCAAATTTGG.............................................................................................................................................................................................................................................................................................................................27200.10202000
.................................................................................................................................TCTCCG-AGATCTAGGTGTTCAT....................................................................................................................................................................................................................................................................................22200.10202000
.........................................................................................................................TCTTATAGTCTCCG-AGATCTAGGTGT........................................................................................................................................................................................................................................................................................26200.10202000
...................................................................................................................TCTAGCTCTTATAGTCTCCG-AGA.................................................................................................................................................................................................................................................................................................23200.10200020
...............................................................AAACTCGATAAGTGTACA-TACTACA...................................................................................................................................................................................................................................................................................................................................................25160.06100010
.....................................................................................................................................CG-AGATCTAGGTGTTCATACGG................................................................................................................................................................................................................................................................................22200.05101000
.......................................................................................................AAATTTGGTGGCTCTAGCTCTTA..............................................................................................................................................................................................................................................................................................................23200.05101000
......................................................................................................................AGCTCTTATAGTCTCCG-AGAT................................................................................................................................................................................................................................................................................................21200.05100001
...........................................................................................................................................TCTAGGTGTTCATACGGACGGAC--------A.................................................................................................................................................................................................................................................................24200.05100010
................................................................................A-TACTACACGAGACTGCAT........................................................................................................................................................................................................................................................................................................................................19200.05110000
.............................................................................................................................................TAGGTGTTCATACGGACGGAC--------A.................................................................................................................................................................................................................................................................22200.05101000
....................................................................................................................................CCG-AGATCTAGGTGTTCATACGGACGG............................................................................................................................................................................................................................................................................27200.05101000
droVir3
GGAA---------A--------------------------AGAAATGATCAATTTTCGGAAACAAACTCTATCTGCGTATG-TTCTAAGAGGACCTACA-GCTAAATTTCAAATCTCTAGATTTTATAGTTACTA-TGATCCTTGCGTTCATACATACGGACGGACGGACAGACAGACTGGCAT-GGCTGGATCGACTACGGTCTTGATG-----CTGATAAACAA-------------TATATAT---------A-----------------TACCTAATGGG------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...................................................................................................................................................TTCATACATACGGACGGACGGAC..................................................................................................................................................................................................................................................................23200.306000000000000000000000000600000000000000000000000000000000000000
...................................................................................................................................................TTCATACATACGGACGGACGGACAGA...............................................................................................................................................................................................................................................................26200.255000000000000000000000000000000000050000000000000000000000000000
..............................................................................................................................................................GGACGGACGGACAGACAGACTG........................................................................................................................................................................................................................................................2290.111000000000000000000000010000000000000000000000000000000000000000
...........................................................................................................................................TCCTTGCGTTCATACATACGGA...........................................................................................................................................................................................................................................................................22200.102000000000000000000000000000002000000000000000000000000000000000
...........................................................................................................................................TCCTTGCGTTCATACATACGGACGG........................................................................................................................................................................................................................................................................25200.051000000000000000000000000000000000000000100000000000000000000000
.................................................................................................................................................CGTTCATACATACGGACGGAC......................................................................................................................................................................................................................................................................21200.051100000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................GCGTTCATACATACGGACGGACGGAC..................................................................................................................................................................................................................................................................26200.051000000000000000000000000000000100000000000000000000000000000000
..............................................................................................................................................TTGCGTTCATACATACGGACGGAC......................................................................................................................................................................................................................................................................24200.051000000000000000000000000100000000000000000000000000000000000000
..................................................................................................................................................GTTCATACATACGGACGGACG.....................................................................................................................................................................................................................................................................21200.051000000000000000000001000000000000000000000000000000000000000000
.......................................................................................................................................................TACATACGGACGGACGGACAGAC..............................................................................................................................................................................................................................................................23200.051000010000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................ATACATACGGACGGACGGACA.................................................................................................................................................................................................................................................................21200.051000000000000001000000000000000000000000000000000000000000000000
..............................................................................................................................................TTGCGTTCATACATACGGACGGACGG....................................................................................................................................................................................................................................................................26200.051000000000000000000000000000000100000000000000000000000000000000
...................................................................................................................................................TTCATACATACGGACGGACGGACA.................................................................................................................................................................................................................................................................24200.051000000000000000000000000000000000000100000000000000000000000000
droMoj3
GAG-----------------------------------------TCGAGCAAAATAT---GATAAGCTTGTACTGG-TATG-GTATACACGAATCTTCAAGCAAAATTTCAGCTCTATAGCTCTTATAATTTTTG-AGATCTACGCGTTCATACGGACGGAC--------GGAAAGACGGACAG-GGCTATATCGACTCAGCTCGTCGTC-----CTGATCAAGAA-------------TATATA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
AGGGCA--------------------------------------GTTAGCGAAATTTTAAAATGAAACTAAAATG-----------------ATCAGCGTGTGGAATACCAAAACCAAATTGCTTATAGACTCAG-AGATC-----GCTCATACAAACC----------------GATGGATAT-GTTTAGATCGACTCGGCTAATGATG-----CTGATCAAGAA-------------TATACAT---------A-----------------TATAAGTTATGT-------------CT--------------------------------------------------------------------------------------------------------------------------T-----SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
AAG-------------------------------------AGGGCATGGCAAAAATTTTAAACAAACTTAACCTGCCCATC-ATTCACAGGAGTTTTTGATCAAAATTTTATAGCACTATCGCTAATAGACTCGGAAGATCCACATGTTCATACGGATAGAT--------ATATAGACGGACAA-GGCTATATCGACTCGGCTGTTGATG-----CTGATCAAGAC-------------TATATAT---------T-----------------CTCTGGATATG----------AGTTACACATGAATTGA-----------------------CATGA-----------------------------------------------------------------------------------ACAT--SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.............................................................................................................................................................................TAGACGGACAA-GGCTATATCGACTC.....................................................................................................................................................................................................................................2511.001010000
................................................................................................................................................................................................TCGACTCGGCTGTTGATG-----C....................................................................................................................................................................................................................1970.141000001
droBip1
CGGG---------AG-------------------------GGGGCGTGGCAACATTTTGAAACAAACTTGAACTACGTGGA-CATTGACGGAGTATCCATGCCAAACCCTATAGCTATATCTCTTATAGTCTTTC-AGATCGACGCGTTCATACGGACGGAC--------CA----ACGGACAGGGGCTATATCGACTTGGCTGTTGACG-----CTGATCAATAG-------------C-TATAG------CTT-AAATA------TAAGAT-------T-----------------ATA-------T--AAATGAT---------GATTCCTTCTCTATGTTAAA---------------------------------------------------------TACAT-------------T-----SizeHit CountTotal NormTotal
No Reads
droKik1
AAT--------------------------------------------------GTTATCAAATTCACTTCCGAGTGGAA-ACTAGAACAGGCCTGTATATGCAAAGTTTCATTCAGATAACTGTAAAACTGAGGG-ACTAGTTTGCGTTGAAACGG----------------ACAGACGGACAT-GGCTAGATCGACTCGGCTGTTGATG-----CTGACCAGGAA-------------TATGTGC-GGTAGTTT-ACAGAAT----TAAGAT-------TAG-----------TGTGACC--------------AAT---------TAGGAAATATCAAAAATATA---------------------------------------------------------TTTTT---TA--------A-----SizeHit CountTotal NormTotal
No Reads
droFic1
------------------------------------------------------------------------------------------------------------------------CTTTTATAATTTCCG-AGAATTTGACGTTCATACGGACGGAC--------AGA----CAGACAT-ACATAGATCGACTCGTCCAATGAGT-----CTGATCAGAAA-------------TACAGAC---T-----AAAGAAG-----------------TTGGGT-----------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
G-----------------------------------------------------TTTTAAAATAAACTTGAAATAA------AATGACTCGAATCTGCATCCCAAAT-------CTCTAGCTTTTATAGTTT-----------------CATTCGGACGGAC--------TGACAAAC--ATAT-GGCTAGATCGACTCGGCTATTGATC-----CTGATCAAGTA-------------TATATTT---------A-ACTCG----------------CTTGGTT-------------ATT----TATT--GACAAGA---------------------------------------------------------------AATCTGTTTGTAA---AGTTAACTTAGC---AAAGGC----C-----SizeHit CountTotal NormTotal
No Reads
droRho1
TGGGCGTCAG---AG-------------------------GGGGCGTGGCACCATTTTGAAACAAACTTGCGCTGCGTAGG-AACTCCTAAAATCTACATGCAAAATGTCAATCTTCTAGCTTTTATAGTTTCCG-AGATCTCAGCGTTCATACGGACAGAC----AGACGGACAGACGGACAT-GGCTTGATCGACTCGGCTAGTGATC-----CTGAACAAGAA-------------TATATAT---------A-----------------CTTT--ATAG-----------------------------------------------------------------------GGTCGGAAACTAGAGTTGTTGATAATATATCAAAATATCA----------------------------A-----SizeHit CountTotal NormTotal
No Reads
droBia1
TAGGCGCTACAGATT--------------TTCGCGGAATGTGGGCGTGGCA----TCTGAAACAAACTTGCGCTGCGTAGG-AAGCCCAGGAATATGCATGCCAAGTCTGACGGTTCTACCTTTTATAGTTTCCG-AGATCTCAGTGTTCATACGGACGGAC--------GGACAGATGGACAT-GGCTAGATCGACTCGGCTAGTGATC-----TTGATGACAAT-------------TCA---------------AGAAG----------------GTTGGGG-------------GGT----TGAT--GAGAA-T---------GATTTT-----------------------------------------------------------------------------------------A-----SizeHit CountTotal NormTotal
No Reads
droTak1
TGGGCGTTAG---AG-------------------------GGGGCGTGGCACCCTTTTGAAACAAACTTGCGCTGCGTAGG-AACTCCTAGAGTCTGCATGCAAAATGTCAATCTTCTAGCTTTTATAGTTTCCG-AAATCTCAGCGTTCATACGGACAGAC--------AGACAGACGGACAT-GGCTATATCGACTCGGCTAGTGACC-----CTGATCAAGAA-------------TATATAT---------AGG---------------GAAGTGTAGGGTAATTTGACGAGTAG---------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
G-----------------------------------------GGTGTGGCAGGATGCTGAAATAAACTTGCGCTGTCCAGG-GACCTCAAGAATCTTCATGTTTAATCTCAACATTGTATCTCTTATAGTTCCTG-AGATCTCAGCGTTCATATGGACGGAC--------GGGCAGACGGACAT-GGCTCAATAGACTTCGCTATTGAAT-----T-----ATAAT-------------TA---------------AAAAAATTATGCA--AGCAGAAACAATG---------------------TGTA--TAATTTTATCAGCGCCTAGTTCATTTCTAG--AATC---------------------------------------------------------TGCATTTTTAGTCC--CAA-----SizeHit CountTotal NormTotal
No Reads
dm3
T-------------------------------------------------------TTGAAATAAACTTGCACTGCGCCTA-TGTCTCTAGAATCTTTATGCTTAATCTCAACCTTCTAGCTTTTATAGTTTTTG-AGATCTCGGCGTTCATATGGACGCATAGACATTCGAGCAGACAGACAG-GGACATATAGACTCGGCTATTGATC-----CTGATCATAAC-------------CTTTGAC------------------------------------------TCTACGAGTAACGGATATATAAA-----------------------TATCA-----------------------------------------------------------------------------------AC----SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...................................................................................................................................................................................................ACTCGGCTATTGATC-----CTGATC...............................................................................................................................................................................................................21201.953900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................TTTTATAGTTTTTG-AGATCTCGGC..........................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.......................................................................................................................................................................TTCGAGCAGACAGACAG-GGA................................................................................................................................................................................................................................................2011.0010000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................TTTTATAGTTTTTG-AGATCTCGGCGT........................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................TTGATC-----CTGATCATAAC-------------CTT..........................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................CCTA-TGTCTCTAGAATCTTTATGCT.....................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................TATGGACGCATAGACATTCGAGCAGAA..........................................................................................................................................................................................................................................................2711.0010000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................ACTGCGCCTA-TGTCTCTAGA................................................................................................................................................................................................................................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................CTGCGCCTA-TGTCTCTAGAAT..............................................................................................................................................................................................................................................................................................................................................2140.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................TGCGCCTA-TGTCTCTAGAAT..............................................................................................................................................................................................................................................................................................................................................2040.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................TGTCTCTAGAATCTTTATGCT.....................................................................................................................................................................................................................................................................................................................................2140.5020000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................CGCCTA-TGTCTCTAGAAT..............................................................................................................................................................................................................................................................................................................................................1850.4020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................TGTCTCTAGAATCTTTATGCTTAAT.................................................................................................................................................................................................................................................................................................................................2530.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................TCTAGAATCTTTATGCTTAATCTCAA............................................................................................................................................................................................................................................................................................................................2660.3320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................ATAGACTCGGCTATTGATC-----CT...................................................................................................................................................................................................................2160.3320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................A-TGTCTCTAGAATCTTTATGC......................................................................................................................................................................................................................................................................................................................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................CTTTATGCTTAATCTCAACCT.........................................................................................................................................................................................................................................................................................................................2150.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
................................................................................................................................................................................................TAGACTCGGCTATTGATC-----CTG..................................................................................................................................................................................................................2150.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................TTATGCTTAATCTCAACCTTCT......................................................................................................................................................................................................................................................................................................................2260.1710000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................TCTAGAATCTTTATGCTTAATCTCA.............................................................................................................................................................................................................................................................................................................................2560.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................CTAGAATCTTTATGCTTAATC................................................................................................................................................................................................................................................................................................................................2160.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................TTAATCTCAACCTTCTAGCTT.................................................................................................................................................................................................................................................................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................AGAATCTTTATGCTTAATCTC..............................................................................................................................................................................................................................................................................................................................2170.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................ATCTTTATGCTTAATCTCAAC...........................................................................................................................................................................................................................................................................................................................2170.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................ACTCGGCTATTGATC-----CTG..................................................................................................................................................................................................................18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................TAATCTCAACCTTCTAGCTTT................................................................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
.................................................................................................TATGCTTAATCTCAACCTTCT......................................................................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................TCTACGAGTAACGGATAT..........................................................................................................................18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................TATGCTTAATCTCAACCTTCTAGCTT.................................................................................................................................................................................................................................................................................................................26200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................AATCTCAACCTTCTAGCTTTT...............................................................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000100000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................TAGACTCGGCTATTGATC-----CTGT.................................................................................................................................................................................................................22120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................GCTTAATCTCAACCTTCTAGC...................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................TAATCTCAACCTTCTAGCTT.................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................TTAATCTCAACCTTCTAGCTTTTATAGT..........................................................................................................................................................................................................................................................................................................28200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................CTTAATCTCAACCTTCTAGCTTTTAT.............................................................................................................................................................................................................................................................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................TATGCTTAATCTCAACCTTCTAG....................................................................................................................................................................................................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................ATGCTTAATCTCAACCTTCTAGCTTT................................................................................................................................................................................................................................................................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................TTAATCTCAACCTTCTAGCTTTTATA............................................................................................................................................................................................................................................................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................TCAACCTTCTAGCTTTTATAG...........................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................TTAATCTCAACCTTCTAGCTTT................................................................................................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
....................................................................................................GCTTAATCTCAACCTTCTA.....................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................TTAATCTCAACCTTCTAGCTTTTAT.............................................................................................................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.................................................................................................TATGCTTAATCTCAACCTTCTAGCTTT................................................................................................................................................................................................................................................................................................................27200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................ATGCTTAATCTCAACCTTCTA.....................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................TTAATCTCAACCTTCTAGCTTTTA..............................................................................................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
G------------------------------------------GCGTGGCAAAATGGGTCAACAAACTTGT-CTGCGTCTT--ATCTCTAGAATCTGTACGCTGAATCTCAACCTTCTAGCTTTTATAGTTCCTG-AGATCTCGATGTTCTTACGGACA----------------GACGGACAT-GGCTAAATCGATTCGGCTATTGATC-----CCGATCAAGAA-------------TTTATAT---------A-----------------TATAG------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.............................................................................................................................ATAGTTCCTG-AGATCTCGATGTTCT.....................................................................................................................................................................................................................................................................................25161.00610023000210908000000
.....................................................................................................................................TG-AGATCTCGATGTTCTTACGGACA----------------.............................................................................................................................................................................................................................................................25159.00590000004601030000000
.....................................................................................................................................TG-AGATCTCGATGTTCTTACGGACA----------------GA...........................................................................................................................................................................................................................................................27115.0015004000110000000000
.............................................................................................................................ATAGTTCCTG-AGATCTCGATGTTCTT....................................................................................................................................................................................................................................................................................26115.001500000030705000000
.............................................................................................................................ATAGTTCCTG-AGATCTCGATGTTC......................................................................................................................................................................................................................................................................................24513.006500500016122165000000
.............................................................................................................................ATAGTTCCTG-AGATCTCGATGTT.......................................................................................................................................................................................................................................................................................23510.40520000002271238000000
........................................................................................................................................................ACGGACA----------------GACGGACAT-GGCTAAATCGA........................................................................................................................................................................................................................................2735.6717000000141200000000
.......................................................................................................................................................TACGGACA----------------GACGGACAT-GGCTAAATC..........................................................................................................................................................................................................................................2695.33480015000128801022000
.....................................................................................................................................TG-AGATCTCGATGTTCTTACGGAC..............................................................................................................................................................................................................................................................................2415.00500010040000000000
.......................................................................................................................................................TACGGACA----------------GACGGACAT-GGCTAAATCGA........................................................................................................................................................................................................................................2833.331000000050500000000
............................................................................................................................................................................................TAAATCGATTCGGCTATTGATC-----CCGAT................................................................................................................................................................................................................2713.00300000010002000000
......................................................................................................................................................TTACGGACA----------------GACGGACAT-GGCTAAATC..........................................................................................................................................................................................................................................2713.00300000010200000000
.......................................................................................................................................................................................T-GGCTAAATCGATTCGGCTATTGA............................................................................................................................................................................................................................2412.00200000010100000000
.....................................................................................................................................TG-AGATCTCGATGTTCTTACGGACA----------------G............................................................................................................................................................................................................................................................2612.00200100000100000000
............................................................................................ATCTGTACGCTGAATCTCAACCTT........................................................................................................................................................................................................................................................................................................................2422.00400000001030000000
....................................................................TGT-CTGCGTCTT--ATCTCTAGAAT..............................................................................................................................................................................................................................................................................................................................................2312.00200000010001000000
.............................................................................................................................ATAGTTCCTG-AGATCTCGATGTTCTTA...................................................................................................................................................................................................................................................................................2712.00200000020000000000
............................................................................................................................TATAGTTCCTG-AGATCTCGATGTTCT.....................................................................................................................................................................................................................................................................................2612.00200000000200000000
.........................................................................TGCGTCTT--ATCTCTAGAATCTGTA.........................................................................................................................................................................................................................................................................................................................................2412.00200000000200000000
......................................................TGGGTCAACAAACTTGT-CTGCGTCTT--A........................................................................................................................................................................................................................................................................................................................................................2712.00200000010001000000
............................................................................................................................TATAGTTCCTG-AGATCTCGATGTT.......................................................................................................................................................................................................................................................................................2442.00800000032201000000
................................................................................................................................................................................ACGGACAT-GGCTAAATCGATTCGGC..................................................................................................................................................................................................................................2512.00200000010010000000
............................................................................................................................................................................................TAAATCGATTCGGCTATTGATC-----CCGA.................................................................................................................................................................................................................2612.00200000000101000000
.............................................................................................................................ATAGTTCCTG-AGATCTCGATGT........................................................................................................................................................................................................................................................................................2251.80900000043110000000
.......................................................................................................................................................TACGGACA----------------GACGGACAT-GGCTA..............................................................................................................................................................................................................................................22201.6533000000000000330000
................................................................................T--ATCTCTAGAATCTGTACGCTGAATC................................................................................................................................................................................................................................................................................................................................2621.50300000020100000000
........................................................................................................................................................ACGGACA----------------GACGGACAT-GGCTAAATC..........................................................................................................................................................................................................................................2591.331200300031401000000
.........................................................................................................................................................CGGACA----------------GACGGACAT-GGCTAAATCGA........................................................................................................................................................................................................................................2631.33400000000200020000
........................................................................................................................................................ACGGACA----------------GACGGACAT-GGCTAAATCGAT.......................................................................................................................................................................................................................................2811.00100000000100000000
....................................................................TGT-CTGCGTCTT--ATCTCTAGAATC.............................................................................................................................................................................................................................................................................................................................................2411.00100000000100000000
....................................................................TGT-CTGCGTCTT--ATCTCTAGAATTA............................................................................................................................................................................................................................................................................................................................................2511.00100000010000000000
.....................................................................................................................................TG-AGATCTCGATGTTCTTACGGACT----------------.............................................................................................................................................................................................................................................................2511.00100000000010000000
........................................................................................TAGAATCTGTACGCTGAATCTCAA............................................................................................................................................................................................................................................................................................................................2431.00300000000000021000
............................................................AACAAACTTGT-CTGCGTCTT--ATA......................................................................................................................................................................................................................................................................................................................................................2311.00100010000000000000
..................................................................CTTGT-CTGCGTCTT--ATCTCTAGAATC.............................................................................................................................................................................................................................................................................................................................................2611.00100000000100000000
................................................................................T--ATCTCTAGAATCTGTACGCT.....................................................................................................................................................................................................................................................................................................................................2121.00200000000020000000
.......................................................................................................................................................................................T-GGCTAAATCGATTCGGCTATTGATC-----C....................................................................................................................................................................................................................2711.00100000001000000000
.................................................................................................................................................................................CGGACAT-GGCTAAATCGATTCGG...................................................................................................................................................................................................................................2311.00100000000001000000
....................................................................................................................................................................................................TTCGGCTATTGATC-----CCGATCAAGAA-------------.............................................................................................................................................................................................2511.00100001000000000000
...................................................................TTGT-CTGCGTCTT--ATCTCTAGAATCTG...........................................................................................................................................................................................................................................................................................................................................2711.00100000000100000000
.......................................................................................................................................................................................T-GGCTAAATCGATTCGGCTATTGATC-----CCGA.................................................................................................................................................................................................................3011.00100000010000000000
............................................................AACAAACTTGT-CTGCGTCTT--ATCTCT...................................................................................................................................................................................................................................................................................................................................................2611.00100000000100000000
.............................................................................................................................................................................................................TGATC-----CCGATCAAGAA-------------TTTATAT---------A-----------------TATA.......................................................................................................................................................2811.00100000010000000000
......................................................TGGGTCAACAAACTTGT-CTGCGTC.............................................................................................................................................................................................................................................................................................................................................................2411.00100000000100000000
...................................................................TTGT-CTGCGTCTT--ATCTCTAGAATC.............................................................................................................................................................................................................................................................................................................................................2511.00100000000100000000
......................................................................................................................................................TTACGGACA----------------GACGGACAT-GGCTAA.............................................................................................................................................................................................................................................2411.00100000000000010000
.........................................................................................................................................................CGGACA----------------GACGGACAT-GGCTAAATCGAT.......................................................................................................................................................................................................................................2711.00100000000010000000
................................................................................................................................................................................................TCGATTCGGCTATTGATC-----CCGATC...............................................................................................................................................................................................................2411.00100000000001000000
...........................................................................................................................................................................................CTAAATCGATTCGGCTATTGATC-----CCGA.................................................................................................................................................................................................................2711.00100000010000000000
..................................................................................................................................TCCTG-AGATCTCGATGTTCTTACGGA...............................................................................................................................................................................................................................................................................2611.00100000010000000000
.............................................................................................TCTGTACGCTGAATCTCAACCTTCTA.....................................................................................................................................................................................................................................................................................................................2611.00100000000100000000
.....................................................................................................................................TG-AGATCTCGATGTTCTTACGGACA----------------GACGGA.......................................................................................................................................................................................................................................................3111.00100000010000000000
................................................................................................................................................................................................TCGATTCGGCTATTGATC-----CCGAT................................................................................................................................................................................................................2311.00100010000000000000
....................................................................................................................................................................................................TTCGGCTATTGATC-----CCGATCAAGAA-------------TT...........................................................................................................................................................................................2711.00100000010000000000
.......................................................................................................................................................TACGGACA----------------GACGGACAT-GGCTAA.............................................................................................................................................................................................................................................2390.78700000000000070000
.......................................................................................................................................................TACGGACA----------------GACGGACAT-GGCTAAAT...........................................................................................................................................................................................................................................2590.67600000012210000000
.......................................................................................................................................................TACGGACA----------------GACGGACAT-GGCTAAA............................................................................................................................................................................................................................................2490.56500000000310010000
..............................................................................................CTGTACGCTGAATCTCAACCTTC.......................................................................................................................................................................................................................................................................................................................2320.50100000001000000000
.........................................................................................................................TTTTATAGTTCCTG-AGATCTCGATGT........................................................................................................................................................................................................................................................................................2640.50200000011000000000
...................................................................................ATCTCTAGAATCTGTACGCTGAATC................................................................................................................................................................................................................................................................................................................................2520.50100100000000000000
....................................................................................................................................................TCTTACGGACA----------------GACGGACAT-GG.................................................................................................................................................................................................................................................2220.50100000000000010000
................................................................................T--ATCTCTAGAATCTGTACGCTGA...................................................................................................................................................................................................................................................................................................................................2320.50100000010000000000
................................................................................T--ATCTCTAGAATCTGTACGCTGAA..................................................................................................................................................................................................................................................................................................................................2420.50100000000100000000
.........................................................................................................................TTTTATAGTTCCTG-AGATCTCGATGTT.......................................................................................................................................................................................................................................................................................2740.50200000010001000000
........................................................................................................................................AGATCTCGATGTTCTT....................................................................................................................................................................................................................................................................................1620.50100000000001000000
................................................................................................................................GTTCCTG-AGATCTCGATGTTCTT....................................................................................................................................................................................................................................................................................2320.50100000000001000000
...................................................................................................................................................TTCTTACGGACA----------------GACGGACAT-GGC................................................................................................................................................................................................................................................2420.50100000000000010000
..........................................................................................GAATCTGTACGCTGAATCTCAACC..........................................................................................................................................................................................................................................................................................................................2420.50100000001000000000
............................................................................................ATCTGTACGCTGAATCTCAACCTTC.......................................................................................................................................................................................................................................................................................................................2520.50100000001000000000
...............................................................................TT--ATCTCTAGAATCTGTACGCTGAA..................................................................................................................................................................................................................................................................................................................................2520.50100100000000000000
...............................................................................................TGTACGCTGAATCTCAACCT.........................................................................................................................................................................................................................................................................................................................2020.50100000010000000000
...................................................................................................................................................TTCTTACGGACA----------------GACGGACAT-GGCT...............................................................................................................................................................................................................................................2520.50100000000000010000
....................................................................................TCTCTAGAATCTGTACGCTGAATCTCAA............................................................................................................................................................................................................................................................................................................................2820.50100000000100000000
.............................................................................................TCTGTACGCTGAATCTCAACCT.........................................................................................................................................................................................................................................................................................................................2220.50100000000010000000
......................................................................................................................................G-AGATCTCGATGTTCTT....................................................................................................................................................................................................................................................................................1720.50100000000001000000
......................................................................................TCTAGAATCTGTACGCTGAATCTCAACCTT........................................................................................................................................................................................................................................................................................................................3020.50100000010000000000
...............................................................................TT--ATCTCTAGAATCTGTACGCTGAATC................................................................................................................................................................................................................................................................................................................................2720.50100000010000000000
.......................................................................................................................................................TACGGACA----------------GACGGACAT-GGCT...............................................................................................................................................................................................................................................21200.45900000001000062000
............................................................................................................................................................................................................TTGATC-----CCGATCAAGA...........................................................................................................................................................................................................16140.43600000000105000000
........................................................................................TAGAATCTGTACGCTGAATCTCA.............................................................................................................................................................................................................................................................................................................................2330.33100000000000010000
.........................................................................................................................................................CGGACA----------------GACGGACAT-GGCTAAATC..........................................................................................................................................................................................................................................2490.33300000021000000000
.......................................................................................................GAATCTCAACCTTCTAGCTT.................................................................................................................................................................................................................................................................................................................20200.25500000000005000000
.........................................................................................................................TTTTATAGTTCCTG-AGATCTCGATG.........................................................................................................................................................................................................................................................................................2540.25100000000010000000
...........................................................................................................................TTATAGTTCCTG-AGATCTCGATGTT.......................................................................................................................................................................................................................................................................................2540.25100000000100000000
.............................................................................................................................................................CA----------------GACGGACAT-GGCTA..............................................................................................................................................................................................................................................16200.20400000000004000000
.......................................................................................................................................................TACGGACA----------------GACGGACAT-GGCTAAAA...........................................................................................................................................................................................................................................25100.20200000001001000000
.......................................................................................................................................................TACGGACA----------------GACGGACAT-GGC................................................................................................................................................................................................................................................20200.20400000000004000000
.........................................................................................................ATCTCAACCTTCTAGCTT.................................................................................................................................................................................................................................................................................................................18200.20400000000004000000
.........................................................................................................................TTTTATAGTTCCTG-AGATCTCGAT..........................................................................................................................................................................................................................................................................................2450.20100000000010000000
.............................................................................................................................ATAGTTCCTG-AGATCTCGATG.........................................................................................................................................................................................................................................................................................2160.17100000000001000000
................................................................................................................................GTTCCTG-AGATCTCGATGTT.......................................................................................................................................................................................................................................................................................2060.17100000000001000000
............................................CGTGGCAAAATGGGTCAACAAACT........................................................................................................................................................................................................................................................................................................................................................................2470.14100000000010000000
................................................................................................................................GTTCCTG-AGATCTCGATG.........................................................................................................................................................................................................................................................................................1870.14110000000000000000
...................................................................................................................................................TTCTTACGGACA----------------GACGGACAT-GGT................................................................................................................................................................................................................................................2470.14100000010000000000
.............................................................................................................................ATAGTTCCTG-AGATCTCGATGTTCC.....................................................................................................................................................................................................................................................................................2570.14100100000000000000
........................................................................................TAGAATCTGTACGCTGAATCTCATA...........................................................................................................................................................................................................................................................................................................................2570.14100000000000010000
.............................................................................................................................ATAGTTCCTG-AGATCTCGATGTC.......................................................................................................................................................................................................................................................................................2380.13100000000001000000
.......................................................................................................................................................TACGGACA----------------GACGGACAT-GGCTAAATA..........................................................................................................................................................................................................................................2690.11100000000100000000
.............................................................................................................................ATAGTTCCTG-AGATCTCGATGTTCG.....................................................................................................................................................................................................................................................................................2590.11100100000000000000
.........................................................................................................................................................CGGACA----------------GACGGACAT-GGCTAAA............................................................................................................................................................................................................................................2290.11100100000000000000
...........................................GCGTGGCAAAATGGGT.................................................................................................................................................................................................................................................................................................................................................................................1690.11100000000001000000
.............................................................................................................................ATAGTTCCTG-AGATCTC.............................................................................................................................................................................................................................................................................................17200.10200000000020000000
...........................................................................................................................TTATAGTTCCTG-AGATCTCGA...........................................................................................................................................................................................................................................................................................21200.10200010000000010000
.............................................................................................................................................................CA----------------GACGGACAT-GGCT...............................................................................................................................................................................................................................................15200.10200000000002000000
.................................................................................................................CTTCTAGCTTTTATAGTTCCTG-AGA.................................................................................................................................................................................................................................................................................................25200.10200000000200000000
........................................................................................................................................................ACGGACA----------------GACGGACAT-GGCT...............................................................................................................................................................................................................................................20200.10200000000000020000
........................................................................................................AATCTCAACCTTCTAGCTT.................................................................................................................................................................................................................................................................................................................19200.10200000000002000000
..................................................................................................................TTCTAGCTTTTATAGTTCCTG-AGATCTCGA...........................................................................................................................................................................................................................................................................................30200.10200000001100000000
.......................................................................................................................................................TACGGACA----------------GACGGACA.....................................................................................................................................................................................................................................................16200.10200000000002000000
................................................................................................................................GTTCCTG-AGATCTCGAT..........................................................................................................................................................................................................................................................................................17100.10100000000001000000
................................................................................................................CCTTCTAGCTTTTATAGTTCCTG-AGA.................................................................................................................................................................................................................................................................................................26200.10200000000200000000
........................................................................................................................................................ACGGACA----------------GACGGACAT-GGCTA..............................................................................................................................................................................................................................................21200.10200010000001000000
.....................................................................................................................TAGCTTTTATAGTTCCTG-AGATCTCGA...........................................................................................................................................................................................................................................................................................27200.10200000000200000000
.......................................................................................................................................................TACGGACA----------------GACGGACAT-G..................................................................................................................................................................................................................................................18200.10200000000002000000
.........................................................................................................................................................CGGACA----------------GACGGACAT-GGCTA..............................................................................................................................................................................................................................................20200.10200000000000002000
.........................................................................................................................TTTTATAGTTCCTG-AGATCTCGA...........................................................................................................................................................................................................................................................................................23200.10200000000020000000
........................................................................................................................................................................................................GCTATTGATC-----CCGAT................................................................................................................................................................................................................15130.08100000000001000000
............................................................................................................................................................ACA----------------GACGGACAT-GGCTAA.............................................................................................................................................................................................................................................18140.07100000001000000000
...........................................................................................................................TTATAGTTCCTG-AGATCTCGATA.........................................................................................................................................................................................................................................................................................23150.07100000000010000000
...............................................................................................................................................................................GACGGACAT-GGCTAAATC..........................................................................................................................................................................................................................................18170.06100000000001000000
.....................................................................................................................TAGCTTTTATAGTTCCTG-AG..................................................................................................................................................................................................................................................................................................20200.05100000000100000000
............................................................................................................TCAACCTTCTAGCTTTTATAGTTCCTG-AGA.................................................................................................................................................................................................................................................................................................30200.05100000010000000000
.........................................................................................................................................................CGGACA----------------GACGGACAT-GGCT...............................................................................................................................................................................................................................................19200.05100000000001000000
........................................................................................................AATCTCAACCTTCTAGCTTT................................................................................................................................................................................................................................................................................................................20200.05100000000001000000
.............................................................................................................................ATAGTTCCTG-AGATCTCGA...........................................................................................................................................................................................................................................................................................19200.05100000000100000000
.......................................................................................................................................................TACGGACA----------------GACGGACAT-GGCTAC.............................................................................................................................................................................................................................................23200.05100000000000001000
......................................................................................................................................G-AGATCTCGATGTTA......................................................................................................................................................................................................................................................................................15200.05100000000001000000
..........................................................................................................................................................GGACA----------------GACGGACAT-GGCTA..............................................................................................................................................................................................................................................19200.05100000000001000000
.......................................................................................................................................................TACGGACA----------------GACGGACAT-GG.................................................................................................................................................................................................................................................19200.05100000000001000000
............................................................................................................TCAACCTTCTAGCTTTTATAGTTCCTG-A...................................................................................................................................................................................................................................................................................................28200.05100000000100000000
.......................................................................................................................................................TACGGACA----------------GACGGACAT-GGCG...............................................................................................................................................................................................................................................21200.05100100000000000000
........................................................................................................................................................ACGGACA----------------GACGGACAT-GGCTC..............................................................................................................................................................................................................................................21200.05110000000000000000
...........................................................................................................CTCAACCTTCTAGCTTTT...............................................................................................................................................................................................................................................................................................................18200.05100000000001000000
.....................................................................................................................TAGCTTTTATAGTTCCTG-AGA.................................................................................................................................................................................................................................................................................................21200.05100000000010000000
droSec2
G------------------------------------------------------------------------------------------AATCTGTATGCAGAATCTTA-CCTTCTAGCTTTTATAGTTCCTG-AGATCTCGACGTTTATACGGACA----------------GACGAAAAT-GGCTAGATCGATTCGGCTATTGATC-----CTGATCATGAA-------------TATATACCTAT-----AATATAT----ATA--AG-------T-----------------ATA----TATA--TAATAATATATATACATA----ATATATATATACACTTTATATAGTCGG------------------------------------------------------------AAA-----SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.............................................................................................................................ATAGTTCCTG-AGATCTCGACGTT.......................................................................................................................................................................................................................................................................................23204.2084190650
..............................................................................................................................................................................................................................................................................................................................................TATATATATACACTTTATATAGTCGG------------------------------------------------------------AAA-----2911.0011000
......................................................................................................................................................ATACGGACA----------------GACGAAAAT-GGCTAGA............................................................................................................................................................................................................................................2511.0011000
....................................................................................................................................................TTATACGGACA----------------GACGAAAAT-GGCT...............................................................................................................................................................................................................................................2411.0010010
.................................................................................................................................................................................................................................................................................................................................................ATATATACACTTTATATAGTCGG------------------------------------------------------------AAA-----2660.3321010
.................................................................................................................................................................................................................................................................................................................................................ATATATACACTTTATATAGTCGG------------------------------------------------------------A.......2460.3320020
.....................................................................................................................................TG-AGATCTCGACGTTTATACGGACA----------------.............................................................................................................................................................................................................................................................25120.2531020
.............................................................................................................................ATAGTTCCTG-AGATCTCGACGTTTA.....................................................................................................................................................................................................................................................................................25130.2332010
......................................................................................................................................................................................................CGGCTATTGATC-----CTGATCATG............................................................................................................................................................................................................2150.2011000
................................................................................................................................................................................................TCGATTCGGCTATTGATC-----CTGATC...............................................................................................................................................................................................................24150.2032010
...................................................................................................................................................................................................................................................................................................................................................ATATACACTTTATATAGTCGG------------------------------------------------------------........2170.1411000
.....................................................................................................................................TG-AGATCTCGACGTTTATACGGA...............................................................................................................................................................................................................................................................................23150.1321010
.............................................................................................................................ATAGTTCCTG-AGATCTCGACGTTT......................................................................................................................................................................................................................................................................................24160.1321010
............................................................................................................................................................................................TAGATCGATTCGGCTATTGATC-----CTGA.................................................................................................................................................................................................................2680.1310010
.....................................................................................................................................TG-AGATCTCGACGTTTATACGGACA----------------GA...........................................................................................................................................................................................................................................................27100.1011000
..................................................................................................................................TCCTG-AGATCTCGACGTTTATACGGA...............................................................................................................................................................................................................................................................................26100.1011000
.................................................................................................................................TTCCTG-AGATCTCGACGTTTATACG.................................................................................................................................................................................................................................................................................25110.0911000
.....................................................................................................................................TG-AGATCTCGACGTTTATACGGACA----------------G............................................................................................................................................................................................................................................................26110.0910010
.............................................................................................................................ATAGTTCCTG-AGATCTCGACGTTTATA...................................................................................................................................................................................................................................................................................27120.0810010
.............................................................................................................................ATAGTTCCTG-AGATCTCGACGTTTAT....................................................................................................................................................................................................................................................................................26120.0811000
..............................................................................................................................TAGTTCCTG-AGATCTCGACGTTTA.....................................................................................................................................................................................................................................................................................24130.0811000
................................................................................................................................................................................................TCGATTCGGCTATTGATC-----CTG..................................................................................................................................................................................................................21150.0710010
.................................................................................................................................................................................................CGATTCGGCTATTGATC-----CTGATC...............................................................................................................................................................................................................23150.0711000
................................................................................................................................................................................................TCGATTCGGCTATTGATC-----CTGAT................................................................................................................................................................................................................23150.0711000
..............................................................................................................................TAGTTCCTG-AGATCTCGACGTTT......................................................................................................................................................................................................................................................................................23160.0611000
............................................................................................................................................CTCGACGTTTATACGGACA----------------.............................................................................................................................................................................................................................................................19170.0611000
.............................................................................................................................ATAGTTCCTG-AGATCTCGACGTTTT.....................................................................................................................................................................................................................................................................................25190.0510010
.........................................................................................................................TTTTATAGTTCCTG-AGATCTCGACGT........................................................................................................................................................................................................................................................................................26200.0510010
.............................................................................................................................ATAGTTCCTG-AGATCTCGACGT........................................................................................................................................................................................................................................................................................22200.0510001
...............................................................................................................................AGTTCCTG-AGATCTCGACGT........................................................................................................................................................................................................................................................................................20200.0511000
...................................................................................................................TCTAGCTTTTATAGTTCCTG-AGAT................................................................................................................................................................................................................................................................................................24200.0510010
droYak3
GAAA---------AAAAAATTGAAACATTTTTAAAAAGGGTGGGCGTGGCATCATG---------------------------------------TGGGCGTGGAAACTCAACTTTCTAGC--TTGTAGTTTCTG-AGATCTCGACGTTAATACGGACGGCC----AGACAGACGGACGGACAT-GGCCAGATCGACTCGGCTATTGTTC-----CTGGTCGGAACAATCTAGTATACCCTTTT----------------------------------AC--------TGGACGAGTAACAGGT--ATAAA-----------------------TATCA-----------------------------------------------------------------------------------GTATCASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................................................................................................................TAGC--TTGTAGTTTCTG-AGATCTCGACGT........................................................................................................................................................................................................................................................................................28110.0010000000000010
...........................................................................................................................................TCTCGACGTTAATACGGACGGCC----AG....................................................................................................................................................................................................................................................................2511.00101000000000
..........................................................................................................................................................................AGACGGACGGACAT-GGCC...............................................................................................................................................................................................................................................18200.05110000000000
...........................................................................................................................................................................GACGGACGGACAT-GGCCAGATCGA........................................................................................................................................................................................................................................24200.05100100000000
droEre2
AA--------------------------------------TGGGCGTGGCAACATTTGGAAATAAACTTGCCGTACGTCTA-TGTCTCTGGAAGTTACATGCTTAATCTCAACATTCTACCTTTTTTAGTTCCTG-AGATCCAGGCGCTCATATAGACGAAC--------GGACAGACGGACAT-GGCT--ATCGACTTGGCTATTAATGAACACTTCCTCAAGAA-------------TATATAA---T-----AACCTTT----------------TTAGGTG-------------ATT----AATT--TAATAAAAAA-AT---ATATTTTTATTTTTATAATC---------------------------------------------------------TTTAT-------------T-----SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 06/08/2015 at 03:14 PM