ID:

dpe_767

 Coordinate:

scaffold_14:1586701-1586803 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-10.2 -9.9 -9.4 -9.2

Flybase annnotation

exon [dper_GLEANR_15380:1]; CDS [Dper\GL14566-cds]; exon [dper_GLEANR_15380:2]; CDS [Dper\GL14566-cds]; intron [Dper\GL14566-in]

No Repeatable elements found

mature
  1. scaffold_1:9428699-9428723 -
  2. scaffold_2:4941242-4941266 -
  3. scaffold_2:4945395-4945419 -
  4. dpe_767  scaffold_14:1586747-1586771 -
star
  1. scaffold_1:9428670-9428693 -
  2. scaffold_0:7312069-7312092 -
  3. scaffold_2:4941213-4941236 -
  4. scaffold_2:4945366-4945389 -
  5. scaffold_4:4483314-4483337 +
  6. dpe_767  scaffold_14:1586718-1586741 -

Sense Strand Reads

##################################################-------------------------------------------------------------------------------------------------------##################################################
AATATTGAACATCAGCCGCTGCCCAAGTGGCCGCTGCCAATTGCCATTTGGTACCCCCCGACAAGCTCAACATCATCAGCAACAAGTGTGTATTTAATGCAGTTCTTTGCAAGGAGCAAGGATATTTATCTTGGTTGCTTTTCCTTATTTTAGCATTCGGAGACAATGGCTATGTAGTCACTCTCGAGCACTGCTACCACAAG
**********************************************************************************.((....(((..((.......(((((((.....)))))))))..))).....))******************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 M021
embryo
 V111
male body		 V042
embryo
 V057
head
 V050
head
.................................................................................................................................................TATTTTAGCATTCGGAGACAATGGC................................. 25 0 5 28.20 141 135 2 2 1 0 1
.................................................................................................................................................TATTTTAGCATTCGGAGACAATGGCTA............................... 27 0 4 10.25 41 41 0 0 0 0 0
............................................................................................................................................................................TGTAGTCACTCTCGAGCACTGCTACC..... 26 0 4 7.75 31 15 16 0 0 0 0
.................................................................................................................................................TATTTTAGCATTCGGAGACAATGG.................................. 24 0 5 6.20 31 29 0 2 0 0 0
............................................................................................................................................................................TGTAGTCACTCTCGAGCACTGCTACCA.... 27 0 4 5.25 21 19 2 0 0 0 0
..................................................................................CAAGTGTGTATTTAATGCAGTTCTT................................................................................................ 25 0 4 5.00 20 20 0 0 0 0 0
.................................................................................................................................................TATTTTAGCATTCGGAGACAATGGCT................................ 26 0 5 4.80 24 23 0 0 1 0 0
.............................................ATTTGGTACCCCCCGACAAGCTCAACA................................................................................................................................... 27 0 7 3.86 27 27 0 0 0 0 0
................................................................................................................................................TTATTTTAGCATTCGGAGACAATGGC................................. 26 0 5 2.60 13 13 0 0 0 0 0
..............................................................................................................................................................................TAGTCACTCTCGAGCACTGCTACCA.... 25 0 4 2.25 9 9 0 0 0 0 0
............................................................................................................................................................................TGTAGTCACTCTCGAGCACTGCTAC...... 25 0 4 2.25 9 9 0 0 0 0 0
..............................................................................................................................................................................TAGTCACTCTCGAGCACTGCTACC..... 24 0 4 2.00 8 3 4 0 1 0 0
.................................................................................................................................................TATTTTAGGATTCGGAGACAATGGC................................. 25 1 5 1.60 8 8 0 0 0 0 0
..................................................................................CAAGTGTGTATTTAATGCAGTTCTTTG.............................................................................................. 27 0 4 1.25 5 4 0 0 0 1 0
..................................................................................................................................................ATTTTAGCATTCGGAGACAATGGCTA............................... 26 0 4 1.25 5 5 0 0 0 0 0
......................................................................................................................................................................TGGCTATGTAGTCACTCTCGAGCAC............ 25 0 4 1.25 5 4 1 0 0 0 0
.................................................................................................................................................TATTTTAGCATTCGGAGACAATG................................... 23 0 5 1.20 6 2 0 4 0 0 0
..............................................................................................................................................................................TAGTCACTCTCGAGCACTGCTAC...... 23 0 4 1.00 4 4 0 0 0 0 0
..............................................................................................................................................................................TAGTCACTCTCGAGCACTGCTACCACAA. 28 0 4 1.00 4 4 0 0 0 0 0
..................................................................................................................................................ATTTTAGCATTCGGAGACAATGGC................................. 24 0 5 1.00 5 5 0 0 0 0 0
..TATTGAACATCAGCCGCTGCCCAAG................................................................................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0
.................................................................................................................................................................................TCACTCTCGAGCACTGCTACCACAAG 26 0 5 0.80 4 4 0 0 0 0 0
.................................................................................................................................................TATTTTAGGATTCGGAGACAATGGCTA............................... 27 1 4 0.75 3 3 0 0 0 0 0
................................................................................................................................................TTATTTTAGCATTCGGAGACAATGGCTA............................... 28 0 4 0.75 3 3 0 0 0 0 0
...........................................................................................................TGCAAGGAGCAAGGATATTTATCTTGG..................................................................... 27 0 6 0.50 3 3 0 0 0 0 0
..........................................................................................................................................................................TATGTAGTCACTCTCGAGCACTGCTAC...... 27 0 4 0.50 2 2 0 0 0 0 0
..............................................................................................TAATGCAGTTCTTTGCAAGGAGCAAGG.................................................................................. 27 0 4 0.50 2 2 0 0 0 0 0
...........................................................................................................................................................TTCGGAGACAATGGCTATGTAGTC........................ 24 0 4 0.50 2 2 0 0 0 0 0
..........................................................................................................................................................................TATGTAGTCACTCTCGAGCACTGCTACC..... 28 0 4 0.50 2 0 2 0 0 0 0
......................................................................................................................................................................TGGCTATGTAGTCACTCTCGAGCACTGC......... 28 0 4 0.50 2 2 0 0 0 0 0
......................................................................................................................................................................TGGCTATGTAGTCACTCTCGAGCACTG.......... 27 0 4 0.50 2 2 0 0 0 0 0
................................................................................................................GGAGCAAGGATATTTATCTTGGTT................................................................... 24 0 6 0.50 3 2 0 0 1 0 0
............................................................................................................................................................................TGTAGTCACTCTCGAGCACTGCTACCT.... 27 1 4 0.50 2 0 2 0 0 0 0
...........................................................................................................................................................TTCGGAGACAATGGCTATGTAGTCACTC.................... 28 0 4 0.50 2 0 2 0 0 0 0
..............................................................................................................AAGGAGCAAGGATATTTATCTTGGTT................................................................... 26 0 6 0.50 3 3 0 0 0 0 0
............................................................................................................................................................................TGTAGTCACTCTCGAGCACTGCTA....... 24 0 4 0.50 2 2 0 0 0 0 0
............................................................................................................................................................................TGTAGTCACTCTCGAGCACTGCTACA..... 26 1 4 0.50 2 1 1 0 0 0 0
......................................................................................................................................................TAGCATTCGGAGACAATGGCTATG............................. 24 0 4 0.50 2 2 0 0 0 0 0
..............................................TTTGGTACCCCCCGACAAGCTCAACA................................................................................................................................... 26 0 7 0.43 3 3 0 0 0 0 0
.................................................................................................................................................TATTTTAGAATTCGGAGACAATGGC................................. 25 1 5 0.40 2 2 0 0 0 0 0
.................................................................................................................................................................................TCACTCTCGAGCACTGCTACC..... 21 0 5 0.40 2 1 1 0 0 0 0
.................................................................................................................................................TATTTTAGCATTCGGAGACAAT.................................... 22 0 5 0.40 2 1 0 1 0 0 0
.................................................................................................................................................TATTTTAGGATTCGGAGACAATGGCT................................ 26 1 5 0.40 2 2 0 0 0 0 0
...........................................................................................................TGCAAGGAGCAAGGATATTTATCT........................................................................ 24 0 6 0.33 2 2 0 0 0 0 0
............................................................................................................GCAAGGAGCAAGGATATTTATCTTGG..................................................................... 26 0 6 0.33 2 2 0 0 0 0 0
...................................................................................AAGTGTGTATTTAATGCAGTTCTT................................................................................................ 24 0 4 0.25 1 1 0 0 0 0 0
..........................................................................................................................................................................TATGTAGTCACTCTCGAGCACTGCTACCA.... 29 0 4 0.25 1 1 0 0 0 0 0
............................................................................................................................................................................TGTAGTCAGTCTCGAGCACTGCTACA..... 26 2 4 0.25 1 1 0 0 0 0 0
............................................................................................................................................................................TGTAGTCAGTCTCGAGCACTGCT........ 23 1 4 0.25 1 1 0 0 0 0 0
................................................................................................................................................ATATTTTAGCATTCGGAGACAATGGCTA............................... 28 1 4 0.25 1 1 0 0 0 0 0
..........................................................................................................................................................................TATGTAGTCACTCTCGAGAA............. 20 1 4 0.25 1 0 1 0 0 0 0
................................................................................................................................................CTATTTTAGCATTCGGAGACAATGGTTA............................... 28 2 4 0.25 1 1 0 0 0 0 0
...........................................................................................................................................................................ATGTAGTCACTCTCGAGCACTGCTACA..... 27 1 4 0.25 1 0 1 0 0 0 0
............................................................................................................................................................TCGGAGACAATGGCTATGTAGTCACTC.................... 27 0 4 0.25 1 1 0 0 0 0 0
...............................................................................................................................................................................AGTCACTCTCGAGCACTGCTACCACAA. 27 0 4 0.25 1 1 0 0 0 0 0
......................................................................................................................................................................GGGCTATGTAGTCACTCTCGAGCACT........... 26 1 4 0.25 1 1 0 0 0 0 0
...........................................................................................................................................................................ATGTAGTCACTCTCGAGCACTGCTAC...... 26 0 4 0.25 1 1 0 0 0 0 0
...........................................................................................................................................................TTCGGAGACAATGGCTATGTAGTCAC...................... 26 0 4 0.25 1 1 0 0 0 0 0
............................................................................................................................................................................TGTAGCCACTCTCGAGCACTGCTAC...... 25 1 4 0.25 1 1 0 0 0 0 0
.....................................................................................................................................................................ATGGCTATGTAGTCACTCTCGAG............... 23 0 4 0.25 1 1 0 0 0 0 0
..............................................................................................................................................................................TAGTCACTCTCGAGCACTGCTACCACA.. 27 0 4 0.25 1 1 0 0 0 0 0
............................................................................................................................................................................TGTAGTCAATCTCGAGCACTGCTGCCA.... 27 2 4 0.25 1 1 0 0 0 0 0
.............................................................................................................................................................................ATAGTCACTCTCGAGCACTGCTACC..... 25 1 4 0.25 1 1 0 0 0 0 0
..................................................................................CAAGTGTGGATTTAATGCAGTTCTT................................................................................................ 25 1 4 0.25 1 1 0 0 0 0 0
.............................................................................................TTAATGCAGTTCTTTGCAAGGAGC...................................................................................... 24 0 4 0.25 1 1 0 0 0 0 0
...............................................................................................................................................................................AGTCACTCTCGAGCACTGCTACCACA.. 26 0 4 0.25 1 1 0 0 0 0 0
.............................................................................................................................................................................GTAGTCACTCTCGAGCACTGCTAC...... 24 0 4 0.25 1 1 0 0 0 0 0
....................................................................................................................................................................AATGGCTATGTAGTCACTCTCGAG............... 24 0 4 0.25 1 1 0 0 0 0 0
............................................................................................................................................................TCGGAGACAATGGCTATGTAGTCACT..................... 26 0 4 0.25 1 1 0 0 0 0 0
............................................................................................................................................................TCGGAGACAATGGCTATGTAGTCACTCT................... 28 0 4 0.25 1 0 1 0 0 0 0
.......................................................................................................................................................AGCATTCGGAGACAATGGCTATGTAG.......................... 26 0 4 0.25 1 1 0 0 0 0 0
......................................................................................................................................................................TGGCTATGTAGTCACTCTCGAGA.............. 23 1 4 0.25 1 0 1 0 0 0 0
..........................................................................................................................................................................TATGTAGTCACTCTCGAGCACTGC......... 24 0 4 0.25 1 1 0 0 0 0 0
...............................................................................................................................................................................AGTCACTCTCGAGCACTGCTAC...... 22 0 4 0.25 1 1 0 0 0 0 0
..................................................................................CAAGTGTGTATTTAATGCAGTTCT................................................................................................. 24 0 4 0.25 1 1 0 0 0 0 0
..........................................................................................................................................................................TATGTAGTCACTCTCGAGCACTG.......... 23 0 4 0.25 1 1 0 0 0 0 0
......................................................................................................................................................................TGGCTATGTAGTCACTCTCGAGCCC............ 25 1 4 0.25 1 0 0 0 0 1 0
........................................................................................................................................................................GCTATGTAGTCACTCTCGAGCACTGCTA....... 28 0 4 0.25 1 1 0 0 0 0 0
............................................................................................................................................................................TGTAGTCACTCTAGAGCACTGCTACC..... 26 1 4 0.25 1 0 1 0 0 0 0
................................................................................................................................................................................GTCACTCTCGAGCACTGCTACCACAAG 27 0 4 0.25 1 1 0 0 0 0 0
.................................................................................................................................................................GACAATGGCTATGTAGTCACTCTCGA................ 26 0 4 0.25 1 1 0 0 0 0 0
........................................................................................TGTATTTAATGCAGTTCTTTG.............................................................................................. 21 0 4 0.25 1 1 0 0 0 0 0
..................................................................................CAAGTGTGCATTTAATGCAGTTCTT................................................................................................ 25 1 4 0.25 1 1 0 0 0 0 0
............................................................................................................................................................................GGTAGTCACTCTCGAGCACTGCTACA..... 26 2 4 0.25 1 1 0 0 0 0 0
.................................................................................................................................................TATTTTAGCATTCGGAGACAATGGCAA............................... 27 1 4 0.25 1 1 0 0 0 0 0
..................................................................................CAAGTGTGTATTTAATGCAGTTC.................................................................................................. 23 0 4 0.25 1 1 0 0 0 0 0
...................................................................................................................................................TTTTAGCATTCGGAGACAATGGCTA............................... 25 0 4 0.25 1 1 0 0 0 0 0
..............................................................................................................................................................................TAGTCACTCTCGAGCACTGCTACCAC... 26 0 4 0.25 1 1 0 0 0 0 0
............................................................................................................................................................................TGTAGTCACTCTCGAGCACTGCTAA...... 25 1 4 0.25 1 1 0 0 0 0 0
......................................................................................................................................................................TGGCTATGTAGTCACTCTCGAGC.............. 23 0 4 0.25 1 1 0 0 0 0 0
.................................................................................................................................................TATTTTAGTATTCGGAGACAATGGCTA............................... 27 1 4 0.25 1 1 0 0 0 0 0
............................................................................................................................................................................TGTAGTCACTCTCGAGCACTGCTACCAC... 28 0 4 0.25 1 1 0 0 0 0 0
..............................................................................................TAATGCAGTTCTTTGCAAGGAGCAAG................................................................................... 26 0 4 0.25 1 1 0 0 0 0 0
...................................................................................................................................................................CAATGGCTATGTAGTCACTCTCGA................ 24 0 4 0.25 1 1 0 0 0 0 0
.................................................................................................................................................AATTTTAGCATTCGGAGACAATGGC................................. 25 1 5 0.20 1 1 0 0 0 0 0
.................................................................................................................................................TATTTTAGCATTCGGAGACA...................................... 20 0 5 0.20 1 1 0 0 0 0 0
.................................................................................................................................................TATTTTAGCATTCGGAGACAATGGCTAA.............................. 28 1 5 0.20 1 1 0 0 0 0 0
.................................................................................................................................................TATTTTAGCATTCGTAGACAATGGC................................. 25 1 5 0.20 1 1 0 0 0 0 0
................................................................................................................................................TTATTTTAGCATTCGGAGAC....................................... 20 0 5 0.20 1 1 0 0 0 0 0
..................................................................................................................................................ATTTTAGCATTCGGAGACAATGGCT................................ 25 0 5 0.20 1 1 0 0 0 0 0
.................................................................................................................................................TATTTTAGCATTCGGAGACAATGCC................................. 25 1 5 0.20 1 1 0 0 0 0 0
..................................................................................................................................................................................CACTCTCGAGCACTGCTACCACAA. 24 0 5 0.20 1 1 0 0 0 0 0
................................................................................................................................................TTATTTTAGCATTCGGAGACAATGGCT................................ 27 0 5 0.20 1 1 0 0 0 0 0
.................................................................................................................................................TATTTTAGCATTCGGAGAC....................................... 19 0 5 0.20 1 0 0 1 0 0 0
.................................................................................................................................................TATTTTAGCATTCGGAGACATGG................................... 23 2 5 0.20 1 1 0 0 0 0 0
........................................................................TCATCAGCAACAAGTGTGTATTTAAT......................................................................................................... 26 0 5 0.20 1 1 0 0 0 0 0
..............................................................................................................................................................GGAGACAATGGCTATGTAGTCACTC.................... 25 0 5 0.20 1 1 0 0 0 0 0
.................................................................................................................................................TATTTTAGAATTCGGAGACAAGGGC................................. 25 2 5 0.20 1 1 0 0 0 0 0
.................................................................................................................................................GATTTTAGCATTCGGAGACAATGGC................................. 25 1 5 0.20 1 1 0 0 0 0 0
.................................................................................................................................................TATTTTAGCATTCGAAGACAATGG.................................. 24 1 5 0.20 1 1 0 0 0 0 0
.................................................................................................................................................................................TCACTCTCGAGCACTGCTACCACA.. 24 0 5 0.20 1 1 0 0 0 0 0
.............................................................................................................................................TCCTTATTTTAGCATTCGGAGACAATGGC................................. 29 0 5 0.20 1 1 0 0 0 0 0
.................................................................................................................................................TATTTTAGGATTCGGAGACAAAGGC................................. 25 2 5 0.20 1 1 0 0 0 0 0
..................................................................................................................................................ATTTTAGCGTTCGGAGACAATGGC................................. 24 1 5 0.20 1 1 0 0 0 0 0
..................................................................................................................................................................................CACTCTCGAGCACTGCTACCACAAG 25 0 5 0.20 1 1 0 0 0 0 0
................................................................................................................................................TTATTTTAGCATTCGGAGACAATGG.................................. 25 0 5 0.20 1 1 0 0 0 0 0
.................................................................................................................................................TATTTTAGGATTCGGAGACAATGG.................................. 24 1 5 0.20 1 1 0 0 0 0 0
.................................................................................................................................................TATTTTAGTATTCGGAGACAATGG.................................. 24 1 5 0.20 1 1 0 0 0 0 0
.................................................................................................................................................................................TCACTCTCGAGCACTGCTACCACAA. 25 0 5 0.20 1 1 0 0 0 0 0
.................................................................................................................................................TATTTTAGTATTCGGAGACAATGGC................................. 25 1 5 0.20 1 1 0 0 0 0 0
.................................................................................................................................................TATTTTAGCATTCGGAGACAATGC.................................. 24 1 5 0.20 1 1 0 0 0 0 0
.................................................................................................................................................TATTTTAGCATTCTGAGACAATGGC................................. 25 1 5 0.20 1 1 0 0 0 0 0
...........................................................................................................TGCAAGGAGCAAGGATATTTATCA........................................................................ 24 1 6 0.17 1 1 0 0 0 0 0
.....................................................................................................................AAGGATATTTATCTTGGTT................................................................... 19 0 6 0.17 1 1 0 0 0 0 0
............................................................................................................GCAAGGAGCAAGGATATTTATC......................................................................... 22 0 6 0.17 1 0 0 0 1 0 0
............................................................................................................GCAAGGAGCAAGGATATT............................................................................. 18 0 6 0.17 1 1 0 0 0 0 0
...............................................................................................................................................................GAGACCGTGGCTATGTAGTC........................ 20 2 6 0.17 1 0 0 0 1 0 0
...........................................................................................................TGCAAGGAGCAAGGATATTTATCTTGGT.................................................................... 28 0 6 0.17 1 1 0 0 0 0 0
.............................................................................................................CAAGGAGCAAGGATATTTATCTTGG..................................................................... 25 0 6 0.17 1 1 0 0 0 0 0
..................................................................TCAACATCATCAGCAACAAGTGTGTAT.............................................................................................................. 27 0 7 0.14 1 1 0 0 0 0 0
..............................................TTTGGTACGCCCCGACAAGCTCAACA................................................................................................................................... 26 1 7 0.14 1 1 0 0 0 0 0
.............................................ATTTGGTACCCCCCGACAAGCTCA...................................................................................................................................... 24 0 7 0.14 1 0 0 0 1 0 0
.............................................ATTTGGTAGCCCCCGACAAGCTCAACA................................................................................................................................... 27 1 7 0.14 1 1 0 0 0 0 0
.............................................ATTTGGTACCCCCCGACAAGCTCAAC.................................................................................................................................... 26 0 7 0.14 1 1 0 0 0 0 0
..................................................................................................................................................ATTTTAGCTTTCGGAGACAATGG.................................. 23 1 7 0.14 1 1 0 0 0 0 0
......................................................CCCCCGACGAGCTCAACATCATCAGC........................................................................................................................... 26 1 7 0.14 1 1 0 0 0 0 0
..............................................TTTGGTACCCCCCGACAAGCTCAACAA.................................................................................................................................. 27 1 7 0.14 1 1 0 0 0 0 0
.............................................ATTTGGTACCCCCCGACAAGCTCAA..................................................................................................................................... 25 0 7 0.14 1 1 0 0 0 0 0
........................................................................TCATCAGCAACAAGTGTGTATTT............................................................................................................ 23 0 7 0.14 1 1 0 0 0 0 0
...............................................TTGGTACCCTCCTACAAGCTGA...................................................................................................................................... 22 3 7 0.14 1 0 0 0 0 1 0
.............................................ATTTGGTACCCCCCGACAAGCGCAACA................................................................................................................................... 27 1 7 0.14 1 1 0 0 0 0 0
.............................................................CAAGCTCAACATCATCAGCAACAAGTG................................................................................................................... 27 0 7 0.14 1 1 0 0 0 0 0
.............................................ATTTGGTAACCCCCGACAAGCTCAACA................................................................................................................................... 27 1 7 0.14 1 1 0 0 0 0 0
....................................................................AACATCATCAGCAACAAGTGTGTATT............................................................................................................. 26 0 7 0.14 1 1 0 0 0 0 0
................................................................GCTCAACATCATCAGCAACAAGTG................................................................................................................... 24 0 7 0.14 1 1 0 0 0 0 0
................................................TGGTACCCCCCGACAAGCT........................................................................................................................................ 19 0 7 0.14 1 1 0 0 0 0 0
.............................................................CAAGCTCAACATCATCAGCAACAACAT................................................................................................................... 27 3 7 0.14 1 1 0 0 0 0 0
...........................................................................................................TGCAAGGAGCAGGGATAA.............................................................................. 18 2 11 0.09 1 0 0 0 0 1 0

Anti-sense strand reads

TTATAACTTGTAGTCGGCGACGGGTTCACCGGCGACGGTTAACGGTAAACCATGGGGGGCTGTTCGAGTTGTAGTAGTCGTTGTTCACACATAAATTACGTCAAGAAACGTTCCTCGTTCCTATAAATAGAACCAACGAAAAGGAATAAAATCGTAAGCCTCTGTTACCGATACATCAGTGAGAGCTCGTGACGATGGTGTTC
*******************************************************************.((....(((..((.......(((((((.....)))))))))..))).....))********************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 V111
male body
.......................................................GGGGCTGTTCGAGTTGTA.................................................................................................................................. 18 0 7 0.43 3 2 1
.................................................................................................................................................................CTGTTACCGATACATCAGTGAGAGC................. 25 0 4 0.25 1 0 1
...................................................................................................................................................................GTTACCGATACATCAGTGAGAGCTCGT............. 27 0 4 0.25 1 1 0
.................................................................................................................................................................ATGTTACCGATACATCAGTGAGAGCT................ 26 1 4 0.25 1 1 0
....................................................................................................................................................................................GAGAGCTCGTGACGATGGTG... 20 0 5 0.20 1 0 1
...................................................................GTTGTAGTAGTCGTTGTTCACACAT............................................................................................................... 25 0 7 0.14 1 1 0
....................................................................TTGTAGTAGTGGTTGTTCACACA................................................................................................................ 23 1 7 0.14 1 1 0
................................................................CGAGTTGTAGTAGTCGTTGTTCACACA................................................................................................................ 27 0 7 0.14 1 1 0
....................................................................TTGTAGTAGTCGTTGTTCACACAT............................................................................................................... 24 0 7 0.14 1 1 0
.....................................................................TGTAGTAGTCGTTGTTCACACAT............................................................................................................... 23 0 7 0.14 1 1 0
..................................................................AGTTGTAGTAGTCGTTGTTCACACAT............................................................................................................... 26 0 7 0.14 1 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_14:1586651-1586853 - dpe_767 AATATTGAACATCAGCCGCTGCCCAAGTGGCCGCTGCCAATTGCCATTTGGTACCCCCCGACAAGCTCAACATCATCAGCAACAAGTGTGTATTTAATGCAGTTCTTTGCAAGGAGCAAGGATATTTATCTTGGTTGCTTTTCCTTATTTTAGCATTCGGAGACAATGGCTATGTAGTCACTCTCGAGCACTGCTACCACAAG
dp5 XL_group1e:12025207-12025409 + AATATTGAACAGCAGCCGCTGGCCAAGTGGCCGCTGCCAATTGCCATTTGGTAGCCCCCGACAAGCTCAACATCATCAGCAACAAGTGTGTATTTAATGCAGTTCTTTGCAAGGAGCAAGGATATTTATCTTAGTTGCTTTTCCTTATTTTAGCATTCGGAGACAATGGCTATGTAGTCTCTCTCGAGCACTGCTCCCACAAG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
AATATTGAACATCAGCCGCTGCCCAAGTGGCCGCTGCCAATTGCCATTTGGTACCCCCCGACAAGCTCAACATCATCAGCAACAAGTGTGTATTTAATGCAGTTCTTTGCAAGGAGCAAGGATATTTATCTTGGTTGCTTTTCCTTATTTTAGCATTCGGAGACAATGGCTATGTAGTCACTCTCGAGCACTGCTACCACAAGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.................................................................................................................................................TATTTTAGCATTCGGAGACAATGGC.................................25528.2014121351102
.................................................................................................................................................TATTTTAGCATTCGGAGACAATGGCTA...............................27410.25410410000
............................................................................................................................................................................TGTAGTCACTCTCGAGCACTGCTACC.....2647.753116150000
.................................................................................................................................................TATTTTAGCATTCGGAGACAATGG..................................2456.20310290002
............................................................................................................................................................................TGTAGTCACTCTCGAGCACTGCTACCA....2745.25212190000
..................................................................................CAAGTGTGTATTTAATGCAGTTCTT................................................................................................2545.00200200000
.................................................................................................................................................TATTTTAGCATTCGGAGACAATGGCT................................2654.80240231000
.............................................ATTTGGTACCCCCCGACAAGCTCAACA...................................................................................................................................2773.86270270000
................................................................................................................................................TTATTTTAGCATTCGGAGACAATGGC.................................2652.60130130000
..............................................................................................................................................................................TAGTCACTCTCGAGCACTGCTACCA....2542.259090000
............................................................................................................................................................................TGTAGTCACTCTCGAGCACTGCTAC......2542.259090000
..............................................................................................................................................................................TAGTCACTCTCGAGCACTGCTACC.....2442.008431000
..................................................................................CAAGTGTGTATTTAATGCAGTTCTTTG..............................................................................................2741.255040010
..................................................................................................................................................ATTTTAGCATTCGGAGACAATGGCTA...............................2641.255050000
......................................................................................................................................................................TGGCTATGTAGTCACTCTCGAGCAC............2541.255140000
.................................................................................................................................................TATTTTAGCATTCGGAGACAATG...................................2351.206020004
..............................................................................................................................................................................TAGTCACTCTCGAGCACTGCTAC......2341.004040000
..............................................................................................................................................................................TAGTCACTCTCGAGCACTGCTACCACAA.2841.004040000
..................................................................................................................................................ATTTTAGCATTCGGAGACAATGGC.................................2451.005050000
..TATTGAACATCAGCCGCTGCCCAAG................................................................................................................................................................................2511.001010000
.................................................................................................................................................................................TCACTCTCGAGCACTGCTACCACAAG2650.804040000
................................................................................................................................................TTATTTTAGCATTCGGAGACAATGGCTA...............................2840.753030000
...........................................................................................................TGCAAGGAGCAAGGATATTTATCTTGG.....................................................................2760.503030000
..........................................................................................................................................................................TATGTAGTCACTCTCGAGCACTGCTAC......2740.502020000
..............................................................................................TAATGCAGTTCTTTGCAAGGAGCAAGG..................................................................................2740.502020000
...........................................................................................................................................................TTCGGAGACAATGGCTATGTAGTC........................2440.502020000
..........................................................................................................................................................................TATGTAGTCACTCTCGAGCACTGCTACC.....2840.502200000
......................................................................................................................................................................TGGCTATGTAGTCACTCTCGAGCACTGC.........2840.502020000
......................................................................................................................................................................TGGCTATGTAGTCACTCTCGAGCACTG..........2740.502020000
................................................................................................................GGAGCAAGGATATTTATCTTGGTT...................................................................2460.503021000
............................................................................................................................................................................TGTAGTCACTCTCGAGCACTGCTACCT....2740.502200000
...........................................................................................................................................................TTCGGAGACAATGGCTATGTAGTCACTC....................2840.502200000
..............................................................................................................AAGGAGCAAGGATATTTATCTTGGTT...................................................................2660.503030000
............................................................................................................................................................................TGTAGTCACTCTCGAGCACTGCTA.......2440.502020000
............................................................................................................................................................................TGTAGTCACTCTCGAGCACTGCTACA.....2640.502110000
......................................................................................................................................................TAGCATTCGGAGACAATGGCTATG.............................2440.502020000
..............................................TTTGGTACCCCCCGACAAGCTCAACA...................................................................................................................................2670.433030000
.................................................................................................................................................................................TCACTCTCGAGCACTGCTACC.....2150.402110000
.................................................................................................................................................TATTTTAGCATTCGGAGACAAT....................................2250.402010001
...........................................................................................................TGCAAGGAGCAAGGATATTTATCT........................................................................2460.332020000
............................................................................................................GCAAGGAGCAAGGATATTTATCTTGG.....................................................................2660.332020000
...................................................................................AAGTGTGTATTTAATGCAGTTCTT................................................................................................2440.251010000
..........................................................................................................................................................................TATGTAGTCACTCTCGAGCACTGCTACCA....2940.251010000
...........................................................................................................................................................................ATGTAGTCACTCTCGAGCACTGCTACA.....2740.251100000
............................................................................................................................................................TCGGAGACAATGGCTATGTAGTCACTC....................2740.251010000
...............................................................................................................................................................................AGTCACTCTCGAGCACTGCTACCACAA.2740.251010000
...........................................................................................................................................................................ATGTAGTCACTCTCGAGCACTGCTAC......2640.251010000
...........................................................................................................................................................TTCGGAGACAATGGCTATGTAGTCAC......................2640.251010000
.....................................................................................................................................................................ATGGCTATGTAGTCACTCTCGAG...............2340.251010000
..............................................................................................................................................................................TAGTCACTCTCGAGCACTGCTACCACA..2740.251010000
.............................................................................................TTAATGCAGTTCTTTGCAAGGAGC......................................................................................2440.251010000
...............................................................................................................................................................................AGTCACTCTCGAGCACTGCTACCACA..2640.251010000
.............................................................................................................................................................................GTAGTCACTCTCGAGCACTGCTAC......2440.251010000
....................................................................................................................................................................AATGGCTATGTAGTCACTCTCGAG...............2440.251010000
............................................................................................................................................................TCGGAGACAATGGCTATGTAGTCACT.....................2640.251010000
............................................................................................................................................................TCGGAGACAATGGCTATGTAGTCACTCT...................2840.251100000
.......................................................................................................................................................AGCATTCGGAGACAATGGCTATGTAG..........................2640.251010000
......................................................................................................................................................................TGGCTATGTAGTCACTCTCGAGA..............2340.251100000
..........................................................................................................................................................................TATGTAGTCACTCTCGAGCACTGC.........2440.251010000
...............................................................................................................................................................................AGTCACTCTCGAGCACTGCTAC......2240.251010000
..................................................................................CAAGTGTGTATTTAATGCAGTTCT.................................................................................................2440.251010000
..........................................................................................................................................................................TATGTAGTCACTCTCGAGCACTG..........2340.251010000
........................................................................................................................................................................GCTATGTAGTCACTCTCGAGCACTGCTA.......2840.251010000
................................................................................................................................................................................GTCACTCTCGAGCACTGCTACCACAAG2740.251010000
.................................................................................................................................................................GACAATGGCTATGTAGTCACTCTCGA................2640.251010000
........................................................................................TGTATTTAATGCAGTTCTTTG..............................................................................................2140.251010000
..................................................................................CAAGTGTGTATTTAATGCAGTTC..................................................................................................2340.251010000
...................................................................................................................................................TTTTAGCATTCGGAGACAATGGCTA...............................2540.251010000
..............................................................................................................................................................................TAGTCACTCTCGAGCACTGCTACCAC...2640.251010000
............................................................................................................................................................................TGTAGTCACTCTCGAGCACTGCTAA......2540.251010000
......................................................................................................................................................................TGGCTATGTAGTCACTCTCGAGC..............2340.251010000
............................................................................................................................................................................TGTAGTCACTCTCGAGCACTGCTACCAC...2840.251010000
..............................................................................................TAATGCAGTTCTTTGCAAGGAGCAAG...................................................................................2640.251010000
...................................................................................................................................................................CAATGGCTATGTAGTCACTCTCGA................2440.251010000
.................................................................................................................................................TATTTTAGCATTCGGAGACA......................................2050.201010000
.................................................................................................................................................TATTTTAGCATTCGGAGACAATGGCTAA..............................2850.201010000
................................................................................................................................................TTATTTTAGCATTCGGAGAC.......................................2050.201010000
..................................................................................................................................................ATTTTAGCATTCGGAGACAATGGCT................................2550.201010000
..................................................................................................................................................................................CACTCTCGAGCACTGCTACCACAA.2450.201010000
................................................................................................................................................TTATTTTAGCATTCGGAGACAATGGCT................................2750.201010000
.................................................................................................................................................TATTTTAGCATTCGGAGAC.......................................1950.201000001
........................................................................TCATCAGCAACAAGTGTGTATTTAAT.........................................................................................................2650.201010000
..............................................................................................................................................................GGAGACAATGGCTATGTAGTCACTC....................2550.201010000
.................................................................................................................................................................................TCACTCTCGAGCACTGCTACCACA..2450.201010000
.............................................................................................................................................TCCTTATTTTAGCATTCGGAGACAATGGC.................................2950.201010000
..................................................................................................................................................................................CACTCTCGAGCACTGCTACCACAAG2550.201010000
................................................................................................................................................TTATTTTAGCATTCGGAGACAATGG..................................2550.201010000
.................................................................................................................................................................................TCACTCTCGAGCACTGCTACCACAA.2550.201010000
.................................................................................................................................................TATTTTAGCATTCGGAGACAATGC..................................2450.201010000
...........................................................................................................TGCAAGGAGCAAGGATATTTATCA........................................................................2460.171010000
.....................................................................................................................AAGGATATTTATCTTGGTT...................................................................1960.171010000
............................................................................................................GCAAGGAGCAAGGATATTTATC.........................................................................2260.171001000
............................................................................................................GCAAGGAGCAAGGATATT.............................................................................1860.171010000
...........................................................................................................TGCAAGGAGCAAGGATATTTATCTTGGT....................................................................2860.171010000
.............................................................................................................CAAGGAGCAAGGATATTTATCTTGG.....................................................................2560.171010000
..................................................................TCAACATCATCAGCAACAAGTGTGTAT..............................................................................................................2770.141010000
.............................................ATTTGGTACCCCCCGACAAGCTCA......................................................................................................................................2470.141001000
.............................................ATTTGGTACCCCCCGACAAGCTCAAC....................................................................................................................................2670.141010000
..............................................TTTGGTACCCCCCGACAAGCTCAACAA..................................................................................................................................2770.141010000
.............................................ATTTGGTACCCCCCGACAAGCTCAA.....................................................................................................................................2570.141010000
........................................................................TCATCAGCAACAAGTGTGTATTT............................................................................................................2370.141010000
.............................................................CAAGCTCAACATCATCAGCAACAAGTG...................................................................................................................2770.141010000
....................................................................AACATCATCAGCAACAAGTGTGTATT.............................................................................................................2670.141010000
................................................................GCTCAACATCATCAGCAACAAGTG...................................................................................................................2470.141010000
................................................TGGTACCCCCCGACAAGCT........................................................................................................................................1970.141010000
.............................................................CAAGCTCAACATCATCAGCAACAACAT...................................................................................................................2770.141010000
dp5
AATATTGAACAGCAGCCGCTGGCCAAGTGGCCGCTGCCAATTGCCATTTGGTAGCCCCCGACAAGCTCAACATCATCAGCAACAAGTGTGTATTTAATGCAGTTCTTTGCAAGGAGCAAGGATATTTATCTTAGTTGCTTTTCCTTATTTTAGCATTCGGAGACAATGGCTATGTAGTCTCTCTCGAGCACTGCTCCCACAAGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads

Generated: 06/08/2015 at 03:12 PM