ID:

dpe_756

 Coordinate:

scaffold_1353:1507-1657 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-36.2 -36.1 -36.0

Flybase annnotation

CDS [Dper\GL22360-cds]; exon [dper_GLEANR_4451:5]; intron [Dper\GL22360-in]

No Repeatable elements found

mature
  1. scaffold_52:448087-448110 +
  2. dpe_756  scaffold_1353:1520-1543 -
  3. scaffold_7358:863-886 -
star
  1. scaffold_155:347-371 -
  2. scaffold_171:33368-33392 -
  3. scaffold_0:11189376-11189400 -
  4. scaffold_2:361222-361246 +
  5. scaffold_3:3534957-3534981 -
  6. scaffold_1655:3440-3464 +
  7. scaffold_9:3241708-3241732 +
  8. scaffold_12:575574-575598 -
  9. scaffold_16:108307-108331 +
  10. scaffold_16:281024-281048 -
  11. scaffold_43:84333-84357 -
  12. dpe_756  scaffold_1353:1632-1656 -
  13. scaffold_1283:3726-3750 +
  14. scaffold_11879:740-764 +
  15. scaffold_924:2875-2899 +
  16. scaffold_258:4863-4887 +
  17. scaffold_4293:1772-1796 +
  18. scaffold_276:14796-14820 +
  19. scaffold_5366:808-832 +

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CAAATCAATTTGCAGTGGCTACGCAGCGCCCGACGTCACGCTCAGACTGATTTTCTGTCTCTCTCGCACGTACTCTTTGTCGTGTCGTTAAATATTAGCGGCGTCTGCCGGAGGAGAGCCATACTGACTTAGTATCGGGTATAACTCTAGAGTTGCGGTGTCCGCAGCAACTCACAACGTTCCGGCTCGTTTTTTCTGCAGTGGATGCCATTTATGAAAAGGGAAATGGAGGCGGGGACTATGATATACCC
***************************************************......((((.((((((((.((.....))))))).............((((....)))))))))))(((((((((...)))))).((((...))))..(((((((.((....)).)))))))..........)))..*************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 M021
embryo
 V042
embryo
 V057
head
....................................................................................................................................................................CAGCAACTCACAACGTTCCGGCTC............................................................... 24 0 3 2.67 8 8 0 0 0
....................................................................................................................................................................CAGCAACTCACAACGTTCCGGCT................................................................ 23 0 3 1.67 5 3 2 0 0
...................................................TTTCTGTCTCTCTCGCACGTACTCT............................................................................................................................................................................... 25 0 19 1.21 23 21 2 0 0
....................................................................................................................................................................CAGCAACTCACAACGTTCCGG.................................................................. 21 0 3 1.00 3 3 0 0 0
...................................................TTTCTGTCTCTCTCGCACGTACTC................................................................................................................................................................................ 24 0 19 1.00 19 19 0 0 0
...................................................................................................................................................................................TTCCGGCTCGTTTTTTCTGCAGTGGG.............................................. 26 1 1 1.00 1 0 1 0 0
...................................................TTTCTGTCTCTCTCGCACGTACTCTT.............................................................................................................................................................................. 26 0 19 0.89 17 16 0 1 0
....................................................................................................................................................................CAGCAACTCACAACGTTCCGGC................................................................. 22 0 3 0.67 2 2 0 0 0
...................................................TTTCTGTCTCTCTCGCACGTACT................................................................................................................................................................................. 23 0 20 0.60 12 11 1 0 0
...................................................TTTCTGTCTCTCTCGCACGTACTCTTTG............................................................................................................................................................................ 28 0 19 0.42 8 8 0 0 0
....................................................................................................................................................................CAGCAACTCACAACGTTCCGGCTCG.............................................................. 25 0 3 0.33 1 1 0 0 0
.....................................................................................................................................................................................................GCAGTGGATGCCATTTATGAAAAGG............................. 25 0 3 0.33 1 1 0 0 0
.....................................................................................................................................................................AGCAACTCACAACGTTCCGGCTCG.............................................................. 24 0 3 0.33 1 1 0 0 0
....................................................................................................................................................................CAGCAACTAACAACGTTCCGGCTCG.............................................................. 25 1 3 0.33 1 1 0 0 0
....................................................................................................................................................................CAGCAACTCACAACGTTCCGGCG................................................................ 23 1 3 0.33 1 0 1 0 0
..................................................................................................................................................................................................TCTGCAGTGGATGCCATTTATGAAAAG.............................. 27 0 3 0.33 1 1 0 0 0
................................................................................................................................................................................................TTTCTGCAGTGGATGCCATTTATGAAAA............................... 28 0 3 0.33 1 1 0 0 0
..................................................................................................................................................................................................TCTGCAGTGGATGCCATTTATGAAAA............................... 26 0 3 0.33 1 1 0 0 0
....................................................................................................................................................................CAGCAACTCACAACGTTCCGGCTA............................................................... 24 1 3 0.33 1 1 0 0 0
...............................................................................................................................................................................................TTTTCTGCAGTGGATGCCATTTAT.................................... 24 0 3 0.33 1 1 0 0 0
....................................................TTCTGTCTCTCTCGCACGTACTCTTTG............................................................................................................................................................................ 27 0 19 0.26 5 5 0 0 0
.......................................................TGTCTCTCTCGCACGTACTCTTTG............................................................................................................................................................................ 24 0 20 0.20 4 4 0 0 0
..........................................................................................................................................................................CTCACAACGTTCCGGCTCGG............................................................. 20 1 6 0.17 1 0 1 0 0
...................................................TTTCTGTCTCTCTCGCACGTACTCTTT............................................................................................................................................................................. 27 0 19 0.16 3 3 0 0 0
....................................................TTCTGTCTCTCTCGCACGTACTCTT.............................................................................................................................................................................. 25 0 19 0.16 3 3 0 0 0
........................................................................................TAAATATTAGCGGCGTCTG................................................................................................................................................ 19 0 20 0.15 3 3 0 0 0
................................................GATTTTCTGTCTCTCTCGC........................................................................................................................................................................................ 19 0 20 0.15 3 3 0 0 0
............................................................................TTGTCGTGTCGTTAAATATTAGC........................................................................................................................................................ 23 0 20 0.10 2 2 0 0 0
...................................................TTTCTGTCTCTCTCGCACGTAC.................................................................................................................................................................................. 22 0 20 0.10 2 2 0 0 0
..............................................................CTCGCACGTACTCTTTGTCGT........................................................................................................................................................................ 21 0 20 0.10 2 1 1 0 0
.....................................................TCTGTCTCTCTCGCACGTACTCT............................................................................................................................................................................... 23 0 19 0.05 1 1 0 0 0
....................................................TTCTGTCTCTCTCGCACGTACTC................................................................................................................................................................................ 23 0 19 0.05 1 1 0 0 0
..................................................TTTTCTGTCTCTCTCGCACGTAC.................................................................................................................................................................................. 23 0 20 0.05 1 1 0 0 0
.........................................................TCTCTCTCGCACGTACTCTTTGTCG......................................................................................................................................................................... 25 0 20 0.05 1 1 0 0 0
.......................................................TGTCTCTCTCGCACGTACTCTTTGT........................................................................................................................................................................... 25 0 20 0.05 1 1 0 0 0
....................................................TTCTCTCTCTCTCGCACGTACTCTT.............................................................................................................................................................................. 25 1 20 0.05 1 1 0 0 0
....................................................................................................................................................................CAGCAACTCACAACGTTCCG................................................................... 20 0 20 0.05 1 1 0 0 0
...................................................TTTCTGTCGCTCTCGCACGTACTC................................................................................................................................................................................ 24 1 20 0.05 1 1 0 0 0
............................................................CTCTCGCACGTCGTCTTAGTC.......................................................................................................................................................................... 21 3 20 0.05 1 0 0 0 1
.......................................................TGTCTCTCTCGCACGTACTC................................................................................................................................................................................ 20 0 20 0.05 1 1 0 0 0
.......................................................TGTCTCTCTCGCACGTACTCTTT............................................................................................................................................................................. 23 0 20 0.05 1 1 0 0 0

Anti-sense strand reads

GTTTAGTTAAACGTCACCGATGCGTCGCGGGCTGCAGTGCGAGTCTGACTAAAAGACAGAGAGAGCGTGCATGAGAAACAGCACAGCAATTTATAATCGCCGCAGACGGCCTCCTCTCGGTATGACTGAATCATAGCCCATATTGAGATCTCAACGCCACAGGCGTCGTTGAGTGTTGCAAGGCCGAGCAAAAAAGACGTCACCTACGGTAAATACTTTTCCCTTTACCTCCGCCCCTGATACTATATGGG
***************************************************************......((((.((((((((.((.....))))))).............((((....)))))))))))(((((((((...)))))).((((...))))..(((((((.((....)).)))))))..........)))..*************************************************** 		Read size # Mismatch Hit Count Total Norm Total V111
male body		 M042
female body
 V057
head
 V050
head
.................................................................................................................................................................GGCGTCGTTGAGTGTTGCAAGGCCG................................................................. 25 0 3 1.00 3 3 0 0 0
...............................CTGCAGTGCGAGTCTGACTA........................................................................................................................................................................................................ 20 0 20 0.40 8 0 8 0 0
......................................................................ATGAGAAACAGCACAGCAATTTATAAT.......................................................................................................................................................... 27 0 4 0.25 1 0 1 0 0
......................................................................ATGAGAAACAGCACAGCAATTTAT............................................................................................................................................................. 24 0 4 0.25 1 0 1 0 0
.....................................................................................................................................................................................................................................TGCGCCCCTGATACTACGTG.. 20 3 5 0.20 1 0 0 1 0
.........................................................................................................................................CCATATTGAGATCTCAACG............................................................................................... 19 0 20 0.15 3 3 0 0 0
......................................................................ATGAGAAACAGCACAGCAA.................................................................................................................................................................. 19 0 18 0.06 1 0 1 0 0
..............................................................GAGCGTGCATGAGAAACAGC......................................................................................................................................................................... 20 0 20 0.05 1 1 0 0 0
.................................................................................................CGCCGCAGACGGCCTCCTC....................................................................................................................................... 19 0 20 0.05 1 0 1 0 0
................................................................................................................CCTCTCGGTATGACTGAATCATAG................................................................................................................... 24 0 20 0.05 1 0 1 0 0
..............................................................................................................................................................ACAGGCGTCGTTGAGTGTT.......................................................................... 19 0 20 0.05 1 0 0 0 1
...................................................................................................................................CATAGCCCATATTGAGATCT.................................................................................................... 20 0 20 0.05 1 1 0 0 0
............................GGGCTGCAGTGCGAGTCTG............................................................................................................................................................................................................ 19 0 20 0.05 1 0 0 0 1
..........................................................GAGAGAGCGTGCATGAGAA.............................................................................................................................................................................. 19 0 20 0.05 1 1 0 0 0
................CCGATGCGTCGCGGGCTGCAG...................................................................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_1353:1457-1707 - dpe_756 CAAATCAATTTGCAGTGGCTACGCAGCGCCCGACGTCACGCTCAGACTGATTTTCTGTCTCTCTCGCACGTACTCTTTGTCGTGTCGTTAAATATTAGCGGCGTCTGCCGGAGGAGAGCCATACTGACTTAGTATCGGGTATAACTCTAGAGTTGCGGTGTCCGCAGCAACTCACAACGTTCCGGCTCGTTTTTTCTGCAGTGGATGCCATTTATGAAAAGGGAAATGGAGGCGGGG------------------------------------------------------------------------------------------------ACTATGATATACCC
dp5 Unknown_group_130:9471-9707 + GAAATCAATTTTCATTGGCTACGCAGCGCCCGACGTCACGTTCAGACTGATTTTCTGTCTCTCTCGCACGCACTCTTTGTCGTGTCGTTTAATATTAGCGGCGTCTGCCGGAGGAGAGCCATACTGACTTAGTATCGGGTATAAGTGTAGAGTTGCGGTCTCCGCAGCAACTCACAACGTTCCCCCTCGGTTTTT-TTCAAT---TGCTT--TTTTTGAAGCAAAACGACGGTAGAA------------------------------------------------------------------------------------------------ATTACG--------
droWil2 scf2_1100000004902:5656000-5656055 + CTGTT-----------------------------GTCTCGCTCTCACTGCTTCTCTCTCTCTCTCACCCGCTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCGTTTCTTT
droVir3 scaffold_12822:572471-572550 - CAATTTCAATTTCAGCGGCTTTCCAATAGCCAACCAAATATTTTGGCTAATTATCTCTCTCCCTCTCCCTCTCTCTGTAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6500:2830014-2830064 + CTGA----------------------------------------------ATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTTATATATTA
droGri2 scaffold_15252:11563514-11563576 + TTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAGTGGATGCAATTTATGCCCAGGGCACCAAGTCGAGCA--------------------------GCAATC----------------------------------------------------------------AATATGATATACCC
droAna3 scaffold_12913:382990-383051 + TTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTAAGTGGATACGATTTATAAAAGCGGGAATGGAGCAGGGC------------------------------------------------------------------------------------------------ACTATGATATCCCC
droBip1 scf7180000394741:3240-3301 + TTAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTAAGTGGATGCGATTTATAAAAGTGGAAATGGAGCAGGGG------------------------------------------------------------------------------------------------ACTATGACATCCCC
droKik1 scf7180000302246:376188-376247 + TTTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTAGTGGATGCTATTTATCGTAAGGGAAATGTATCGGGGG------------------------------------------------------------------------------------------------ACTATGATATACCT
droFic1 scf7180000453924:1145714-1145765 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTGGATGCCATTTATGAAAAGGGCAATGGGTCGGGAA------------------------------------------------------------------------------------------------GTTACGATATACCT
droEle1 scf7180000491046:1858793-1858855 + GTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTCTCAGTGGATGCAATCTATGAGAAGGGAAATGAATCGGGGG------------------------------------------------------------------------------------------------ACTACGATATACCG
droRho1 scf7180000779669:11233-11293 + TTAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTAAGTGGATACCATCTATGAGAAGGGAAATGGCTCAGGGG------------------------------------------------------------------------------------------------ATTACGATATACCA
droBia1 scf7180000302188:2227743-2227804 + GTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTCTTAGTGGATGCCATCTATGAGAAGGGCAACGGATCGGGGG------------------------------------------------------------------------------------------------ACTACGACATACCA
droTak1 scf7180000415708:613708-613906 + AAAGTTATAC-------------------GCATTCAA-AATTGTCAATATATATCTATCTCCCTCGCACTTCCT--------------------------------------------------------------------------------------------------------------------------TTAGCTGAGTTACGATTATTAGTCGGGACACCAACCCGAGTACAGCGTTTGCACTCCCTCTAGCTGAGTGACGGGTATTAGGTAGTCGGGACACCTACCCGACTATAGCGTTCTCTCTTGTTTTTCTTTTAATTTAT------TCCATTTA
droEug1 scf7180000409554:2929586-2929648 - GTTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTTCAGTGGATGCAATTTATAAGAAGGGAAATGCATCGGGGG------------------------------------------------------------------------------------------------ATTACGACATACCT
dm3 chr2L:3160194-3160252 + TTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCAGTTGATGCCATTTATGCGAAGGGAAATGAATCGGGGG------------------------------------------------------------------------------------------------ACTATGAGATACCA
droSim2 2l:3035371-3035429 + TTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCAGTGGATGCGATTTATGCCAAGGGAAATGGATCGGGGG------------------------------------------------------------------------------------------------ACTACGAGATACCG
droSec2 scaffold_5:1312636-1312696 + TTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTCAGTGGATGCGATTTATGCGAAAGGAAGAGAATCGGGTG------------------------------------------------------------------------------------------------ACTATGAGATACCG
droYak3 2L:3157102-3157181 + TCACAAGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATATTTGCCTCTTTATTTAGTGGATGCCATCTATGAGAAGGGAAATGGATCGGGAG------------------------------------------------------------------------------------------------ACTACGAGATACCA
droEre2 scaffold_4929:3204506-3204570 + TTGGCTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATACAGTGGATGCCATCTATGAGAAGGGAAATGGATCGGGGG------------------------------------------------------------------------------------------------ACTACGAGATACCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
CAAATCAATTTGCAGTGGCTACGCAGCGCCCGACGTCACGCTCAGACTGATTTTCTGTCTCTCTCGCACGTACTCTTTGTCGTGTCGTTAAATATTAGCGGCGTCTGCCGGAGGAGAGCCATACTGACTTAGTATCGGGTATAACTCTAGAGTTGCGGTGTCCGCAGCAACTCACAACGTTCCGGCTCGTTTTTTCTGCAGTGGATGCCATTTATGAAAAGGGAAATGGAGGCGGGG------------------------------------------------------------------------------------------------ACTATGATATACCCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....................................................................................................................................................................CAGCAACTCACAACGTTCCGGCTC...............................................................................................................................................................2432.678080000
....................................................................................................................................................................CAGCAACTCACAACGTTCCGGCT................................................................................................................................................................2331.675230000
...................................................TTTCTGTCTCTCTCGCACGTACTCT...............................................................................................................................................................................................................................................................................25191.21232210000
....................................................................................................................................................................CAGCAACTCACAACGTTCCGG..................................................................................................................................................................2131.003030000
...................................................TTTCTGTCTCTCTCGCACGTACTC................................................................................................................................................................................................................................................................................24191.00190190000
...................................................................................................................................................................................TTCCGGCTCGTTTTTTCTGCAGTGGG..............................................................................................................................................2611.001100000
...................................................TTTCTGTCTCTCTCGCACGTACTCTT..............................................................................................................................................................................................................................................................................26190.89170161000
....................................................................................................................................................................CAGCAACTCACAACGTTCCGGC.................................................................................................................................................................2230.672020000
...................................................TTTCTGTCTCTCTCGCACGTACT.................................................................................................................................................................................................................................................................................23200.60121110000
...................................................TTTCTGTCTCTCTCGCACGTACTCTTTG............................................................................................................................................................................................................................................................................28190.428080000
....................................................................................................................................................................CAGCAACTCACAACGTTCCGGCTCG..............................................................................................................................................................2530.331010000
.....................................................................................................................................................................................................GCAGTGGATGCCATTTATGAAAAGG.............................................................................................................................2530.331010000
.....................................................................................................................................................................AGCAACTCACAACGTTCCGGCTCG..............................................................................................................................................................2430.331010000
....................................................................................................................................................................CAGCAACTCACAACGTTCCGGCG................................................................................................................................................................2330.331100000
..................................................................................................................................................................................................TCTGCAGTGGATGCCATTTATGAAAAG..............................................................................................................................2730.331010000
................................................................................................................................................................................................TTTCTGCAGTGGATGCCATTTATGAAAA...............................................................................................................................2830.331010000
..................................................................................................................................................................................................TCTGCAGTGGATGCCATTTATGAAAA...............................................................................................................................2630.331010000
....................................................................................................................................................................CAGCAACTCACAACGTTCCGGCTA...............................................................................................................................................................2430.331010000
...............................................................................................................................................................................................TTTTCTGCAGTGGATGCCATTTAT....................................................................................................................................2430.331010000
....................................................TTCTGTCTCTCTCGCACGTACTCTTTG............................................................................................................................................................................................................................................................................27190.265050000
.......................................................TGTCTCTCTCGCACGTACTCTTTG............................................................................................................................................................................................................................................................................24200.204040000
..........................................................................................................................................................................CTCACAACGTTCCGGCTCGG.............................................................................................................................................................2060.171100000
...................................................TTTCTGTCTCTCTCGCACGTACTCTTT.............................................................................................................................................................................................................................................................................27190.163030000
....................................................TTCTGTCTCTCTCGCACGTACTCTT..............................................................................................................................................................................................................................................................................25190.163030000
........................................................................................TAAATATTAGCGGCGTCTG................................................................................................................................................................................................................................................19200.153030000
................................................GATTTTCTGTCTCTCTCGC........................................................................................................................................................................................................................................................................................19200.153030000
............................................................................TTGTCGTGTCGTTAAATATTAGC........................................................................................................................................................................................................................................................23200.102020000
...................................................TTTCTGTCTCTCTCGCACGTAC..................................................................................................................................................................................................................................................................................22200.102020000
..............................................................CTCGCACGTACTCTTTGTCGT........................................................................................................................................................................................................................................................................21200.102110000
.....................................................TCTGTCTCTCTCGCACGTACTCT...............................................................................................................................................................................................................................................................................23190.051010000
....................................................TTCTGTCTCTCTCGCACGTACTC................................................................................................................................................................................................................................................................................23190.051010000
..................................................TTTTCTGTCTCTCTCGCACGTAC..................................................................................................................................................................................................................................................................................23200.051010000
.........................................................TCTCTCTCGCACGTACTCTTTGTCG.........................................................................................................................................................................................................................................................................25200.051010000
.......................................................TGTCTCTCTCGCACGTACTCTTTGT...........................................................................................................................................................................................................................................................................25200.051010000
....................................................................................................................................................................CAGCAACTCACAACGTTCCG...................................................................................................................................................................20200.051010000
.......................................................TGTCTCTCTCGCACGTACTC................................................................................................................................................................................................................................................................................20200.051010000
.......................................................TGTCTCTCTCGCACGTACTCTTT.............................................................................................................................................................................................................................................................................23200.051010000
dp5
GAAATCAATTTTCATTGGCTACGCAGCGCCCGACGTCACGTTCAGACTGATTTTCTGTCTCTCTCGCACGCACTCTTTGTCGTGTCGTTTAATATTAGCGGCGTCTGCCGGAGGAGAGCCATACTGACTTAGTATCGGGTATAAGTGTAGAGTTGCGGTCTCCGCAGCAACTCACAACGTTCCCCCTCGGTTTTT-TTCAAT---TGCTT--TTTTTGAAGCAAAACGACGGTAGAA------------------------------------------------------------------------------------------------ATTACG--------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.........................................................................TCTTTGTCGTGTCGTTTAATATTAGC........................................................................................................................................................................................................................................................262013.202640180000024600
...............................................................................TCGTGTCGTTTAATATTAGCGGC.....................................................................................................................................................................................................................................................23202.204400000004400
.............................................................TCTCGCACGCACTCTTTGTCG.........................................................................................................................................................................................................................................................................21201.603203200000000
......................................................................................................................................................................GCAACTCACAACGTTCCCCCT................................................................................................................................................................21201.553103100000000
............................................................................TTGTCGTGTCGTTTAATATTAGCGG......................................................................................................................................................................................................................................................25201.3026016000000100
....................................CACGTTCAGACTGATTTTCTGTC................................................................................................................................................................................................................................................................................................23151.131701010000600
...........................................................................TTTGTCGTGTCGTTTAATATTAG.........................................................................................................................................................................................................................................................23201.102200000002200
...........................................................................TTTGTCGTGTCGTTTAATATTAGC........................................................................................................................................................................................................................................................24200.801601600000000
.......................................................................................................................CATACTGACTTAGTATCGGGT...............................................................................................................................................................................................................21200.551101100000000
.....................................................................................................CGTCTGCCGGAGGAGAGCC...................................................................................................................................................................................................................................19200.4080000008000
...........................................................................TTTGTCGTGTCGTTTAATATTAGCG.......................................................................................................................................................................................................................................................25200.3570000000070
...........................................AGACTGATTTTCTGTCTCTCT...........................................................................................................................................................................................................................................................................................21200.3570700000000
.....................................................................................................................................................................AGCAACTCACAACGTTCCCCCTCGG.............................................................................................................................................................2530.3310100000000
....................................................................................................................................................................CAGCAACTCACAACGTTCCCCCTCGG.............................................................................................................................................................2630.3310100000000
.......................................................................................................................................................................CAACTCACAACGTTCCCCCTCGG.............................................................................................................................................................2330.3310100000000
....................................................................................................................................................................CAGCAACTCACAACGTTCCCCCTCGGTT...........................................................................................................................................................2830.3310100000000
.............................................................................TGTCGTGTCGTTTAATATTAGCGGCGTC..................................................................................................................................................................................................................................................28200.3060600000000
...................................................................................................GGCGTCTGCCGGAGGAGAGCC...................................................................................................................................................................................................................................21200.3060600000000
...............TGGCTACGCAGCGCCCGACGTCA.....................................................................................................................................................................................................................................................................................................................23200.3060600000000
....................................................................................TCGTTTAATATTAGCGGCGTCTGCCGGA...........................................................................................................................................................................................................................................28200.3060060000000
....................................CACGTTCAGACTGATTTTCTGTCTCTC............................................................................................................................................................................................................................................................................................27100.3030200000100
.....................................ACGTTCAGACTGATTTTCTGTCTCTC............................................................................................................................................................................................................................................................................................26100.3030300000000
...............................................................................................TAGCGGCGTCTGCCGGAGGAGAG.....................................................................................................................................................................................................................................23200.2550500000000
.......................................GTTCAGACTGATTTTCTGTCTCTCT...........................................................................................................................................................................................................................................................................................25120.2530300000000
.........................................................................................TAATATTAGCGGCGTCTGCCGGA...........................................................................................................................................................................................................................................23200.2550500000000
............................................................................................................................TGACTTAGTATCGGGTATAA...........................................................................................................................................................................................................20200.2550000000500
....................................................................................................................................................................CAGCAACTCACAACGTTCCCCCTC...............................................................................................................................................................24200.2550000000050
...........................................................................TTTGTCGTGTCGTTTAATATTAGCGG......................................................................................................................................................................................................................................................26200.2040000004000
.......................................................................ACTCTTTGTCGTGTCGTTTA................................................................................................................................................................................................................................................................20200.2040000000040
.................................................ATTTTCTGTCTCTCTCGCAC......................................................................................................................................................................................................................................................................................20200.2040000000040
.............ATTGGCTACGCAGCGCCCGAC.........................................................................................................................................................................................................................................................................................................................21200.2040200002000
.........................................TCAGACTGATTTTCTGTC................................................................................................................................................................................................................................................................................................18200.2040400000000
..............TTGGCTACGCAGCGCCCGAC.........................................................................................................................................................................................................................................................................................................................20200.2040400000000
.....................................ACGTTCAGACTGATTTTCTG..................................................................................................................................................................................................................................................................................................20160.1930000000300
..........TTCATTGGCTACGCAGCGCC.............................................................................................................................................................................................................................................................................................................................20120.1720200000000
.AAATCAATTTTCATTGGCTACGCAG.................................................................................................................................................................................................................................................................................................................................25120.1720200000000
....TCAATTTTCATTGGCTACGCAGCGCCC............................................................................................................................................................................................................................................................................................................................27120.1720200000000
...................TACGCAGCGCCCGACGTCACGT..................................................................................................................................................................................................................................................................................................................2260.1710100000000
....TCAATTTTCATTGGCTACGCAGCGCC.............................................................................................................................................................................................................................................................................................................................26120.1720100100000
.......................................GTTCAGACTGATTTTCTGTCTCTC............................................................................................................................................................................................................................................................................................24120.1720000000200
.............................................................................................................................GACTTAGTATCGGGTATAAGT.........................................................................................................................................................................................................2160.1710000001000
........................................TTCAGACTGATTTTCTGTCTCTCTCG.........................................................................................................................................................................................................................................................................................26130.1520200000000
........................................TTCAGACTGATTTTCTGTCTCTCTCGCAC......................................................................................................................................................................................................................................................................................29130.1520200000000
...............................................................................................................................................................CTCCGCAGCAACTCACAACGT.......................................................................................................................................................................21200.1530300000000
.................................................................................GTGTCGTTTAATATTAGCGGC.....................................................................................................................................................................................................................................................21200.1530000000300
.........................................................................................................................................................TGCGGTCTCCGCAGCAACTCACAACG........................................................................................................................................................................26200.1530300000000
...................................................................................................................................GTATCGGGTATAAGTGTAGAG...................................................................................................................................................................................................21200.1530000000300
..............................................................................GTCGTGTCGTTTAATATTAG.........................................................................................................................................................................................................................................................20200.1530000000300
........................................................................................................CTGCCGGAGGAGAGCCATAC...............................................................................................................................................................................................................................20200.1530000000300
....................................CACGTTCAGACTGATTTTCTGTCT...............................................................................................................................................................................................................................................................................................24140.1420100000010
.......................CAGCGCCCGACGTCACGT..................................................................................................................................................................................................................................................................................................................1870.1410100000000
.....................CGCAGCGCCCGACGTCACGT..................................................................................................................................................................................................................................................................................................................2070.1410100000000
............................................................................................................................TGACTTAGTATCGGGTATAAG..........................................................................................................................................................................................................2170.1410000100000
........................AGCGCCCGACGTCACGTTCA...............................................................................................................................................................................................................................................................................................................2080.1310100000000
.......................................GTTCAGACTGATTTTCTGTCT...............................................................................................................................................................................................................................................................................................21170.1220200000000
..............TTGGCTACGCAGCGCCCGA..........................................................................................................................................................................................................................................................................................................................19200.1020200000000
......................................................CTGTCTCTCTCGCACGCACTC................................................................................................................................................................................................................................................................................21200.1020002000000
.....................................................................................................................................ATCGGGTATAAGTGTAGAGT..................................................................................................................................................................................................20200.1020000000020
............CATTGGCTACGCAGCGCCCGA..........................................................................................................................................................................................................................................................................................................................21200.1020200000000
.......................................GTTCAGACTGATTTTCTGTCTCTCTC..........................................................................................................................................................................................................................................................................................26100.1010000000100
.......................................GTTCAGACTGATTTTCTGTCTCTCTCG.........................................................................................................................................................................................................................................................................................27100.1010100000000
.......................................GTTCAGACTGATTTTCTGTCTCTCTCGC........................................................................................................................................................................................................................................................................................28100.1010100000000
..................................................TTTTCTGTCTCTCTCGCACGCAC..................................................................................................................................................................................................................................................................................23200.1020000000020
...........TCATTGGCTACGCAGCGCCCGACG........................................................................................................................................................................................................................................................................................................................24110.0910100000000
..........TTCATTGGCTACGCAGCGCCCGACGT.......................................................................................................................................................................................................................................................................................................................26110.0910100000000
..........TTCATTGGCTACGCAGCGCCCGACG........................................................................................................................................................................................................................................................................................................................25110.0910000100000
..........TTCATTGGCTACGCAGCGC..............................................................................................................................................................................................................................................................................................................................19120.0810010000000
...ATCAATTTTCATTGGCTACGCAGCGCC.............................................................................................................................................................................................................................................................................................................................27120.0810010000000
...........TCATTGGCTACGCAGCGCC.............................................................................................................................................................................................................................................................................................................................19120.0810100000000
.........TTTCATTGGCTACGCAGCGCCCGAC.........................................................................................................................................................................................................................................................................................................................25120.0810100000000
...........TCATTGGCTACGCAGCGCCCGAC.........................................................................................................................................................................................................................................................................................................................23120.0810100000000
..........TTCATTGGCTACGCAGCGCCCGA..........................................................................................................................................................................................................................................................................................................................23120.0810010000000
...........TCATTGGCTACGCAGCGCCCG...........................................................................................................................................................................................................................................................................................................................21120.0810100000000
..AATCAATTTTCATTGGCTACGCAGCG...............................................................................................................................................................................................................................................................................................................................26120.0810100000000
..AATCAATTTTCATTGGCTACGCAG.................................................................................................................................................................................................................................................................................................................................24120.0810100000000
..AATCAATTTTCATTGGCTACGC...................................................................................................................................................................................................................................................................................................................................22130.0810100000000
.....CAATTTTCATTGGCTACGC...................................................................................................................................................................................................................................................................................................................................19130.0810100000000
........................................TTCAGACTGATTTTCTGTCTCTCTCGC........................................................................................................................................................................................................................................................................................27130.0810100000000
......................................................................................................................................TCGGGTATAAGTGTAGAGTTGCG..............................................................................................................................................................................................23140.0710000000100
.....................................ACGTTCAGACTGATTTTCTGTC................................................................................................................................................................................................................................................................................................22150.0710100000000
......................................CGTTCAGACTGATTTTCTGTCT...............................................................................................................................................................................................................................................................................................22150.0710100000000
........................................TTCAGACTGATTTTCTGTCTCTCT...........................................................................................................................................................................................................................................................................................24150.0710100000000
.......................................................................................................................................CGGGTATAAGTGTAGAGTTGC...............................................................................................................................................................................................21150.0710000000001
....................................CACGTTCAGACTGATTTTCT...................................................................................................................................................................................................................................................................................................20160.0610100000000
........................................TTCAGACTGATTTTCTGTCTC..............................................................................................................................................................................................................................................................................................21170.0610100000000
...................................................TTTCTGTCTCTCTCGCACGCACTCT...............................................................................................................................................................................................................................................................................25200.0510100000000
................................................GATTTTCTGTCTCTCTCGCAC......................................................................................................................................................................................................................................................................................21200.0510010000000
...................TACGCAGCGCCCGACGTC......................................................................................................................................................................................................................................................................................................................18200.0510100000000
...............................................TGATTTTCTGTCTCTCTCGCACG.....................................................................................................................................................................................................................................................................................23200.0510010000000
...........................................................................TTTGTCGTGTCGTTTAATAT............................................................................................................................................................................................................................................................20200.0510100000000
..................CTACGCAGCGCCCGACGTCA.....................................................................................................................................................................................................................................................................................................................20200.0510000001000
..............................................................................................................................................................TCTCCGCAGCAACTCACAACGTTCCC...................................................................................................................................................................26200.0510010000000
..........................................................................................AATATTAGCGGCGTCTGCCGGAGGAG.......................................................................................................................................................................................................................................26200.0510100000000
................................................................................CGTGTCGTTTAATATTAGCGGCGTC..................................................................................................................................................................................................................................................25200.0510000000100
..............................................................................GTCGTGTCGTTTAATATTAGCGGCGTC..................................................................................................................................................................................................................................................27200.0510100000000
..............TTGGCTACGCAGCGCCCGACGT.......................................................................................................................................................................................................................................................................................................................22200.0510100000000
...................................................................................................................................GTATCGGGTATAAGTGTAGA....................................................................................................................................................................................................20200.0510100000000
.................................................................................................................GAGAGCCATACTGACTTAGTATCGGGTA..............................................................................................................................................................................................................28200.0510000000010
.........................................................................................................................................................TGCGGTCTCCGCAGCAACTCACAA..........................................................................................................................................................................24200.0510100000000
.......................................................................................TTTAATATTAGCGGCGTCTG................................................................................................................................................................................................................................................20200.0511000000000
...............................................................................................................................................................CTCCGCAGCAACTCACAACGTTCCCCCTC...............................................................................................................................................................29200.0510100000000
..........................................................................................................GCCGGAGGAGAGCCATAC...............................................................................................................................................................................................................................18200.0510000000010
.............................................................................................................................................................GTCTCCGCAGCAACTCACAAC.........................................................................................................................................................................21200.0510010000000
................................................................................CGTGTCGTTTAATATTAG.........................................................................................................................................................................................................................................................18200.0510100000000
.....................................................................GCACTCTTTGTCGTGTCGTTTAAT..............................................................................................................................................................................................................................................................24200.0510100000000
.......................................................................................................TCTGCCGGAGGAGAGCCAT.................................................................................................................................................................................................................................19200.0511000000000
......................................................................................................GTCTGCCGGAGGAGAGCCATACTGA............................................................................................................................................................................................................................25200.0510000001000
.........................................................................................................................................................TGCGGTCTCCGCAGCAACTCACA...........................................................................................................................................................................23200.0510010000000
.................................................................................GTGTCGTTTAATATTAGCGGCGTCTG................................................................................................................................................................................................................................................26200.0510000000100
droWil2
CTGTT-----------------------------GTCTCGCTCTCACTGCTTCTCTCTCTCTCTCACCCGCTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCGTTTCTTTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
CAATTTCAATTTCAGCGGCTTTCCAATAGCCAACCAAATATTTTGGCTAATTATCTCTCTCCCTCTCCCTCTCTCTGTAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
CTGA----------------------------------------------ATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTTATATATTASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
TTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAGTGGATGCAATTTATGCCCAGGGCACCAAGTCGAGCA--------------------------GCAATC----------------------------------------------------------------AATATGATATACCCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
TTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTAAGTGGATACGATTTATAAAAGCGGGAATGGAGCAGGGC------------------------------------------------------------------------------------------------ACTATGATATCCCCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........................................................................................................................................................................................................................AGCGGGAATGGAGCAGGGC------------------------------------------------------------------------------------------------..............1911.001000001
droBip1
TTAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTAAGTGGATGCGATTTATAAAAGTGGAAATGGAGCAGGGG------------------------------------------------------------------------------------------------ACTATGACATCCCCSizeHit CountTotal NormTotal
No Reads
droKik1
TTTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTAGTGGATGCTATTTATCGTAAGGGAAATGTATCGGGGG------------------------------------------------------------------------------------------------ACTATGATATACCTSizeHit CountTotal NormTotal
No Reads
droFic1
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTGGATGCCATTTATGAAAAGGGCAATGGGTCGGGAA------------------------------------------------------------------------------------------------GTTACGATATACCTSizeHit CountTotal NormTotal
No Reads
droEle1
GTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTCTCAGTGGATGCAATCTATGAGAAGGGAAATGAATCGGGGG------------------------------------------------------------------------------------------------ACTACGATATACCGSizeHit CountTotal NormTotal
No Reads
droRho1
TTAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTAAGTGGATACCATCTATGAGAAGGGAAATGGCTCAGGGG------------------------------------------------------------------------------------------------ATTACGATATACCASizeHit CountTotal NormTotal
No Reads
droBia1
GTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTCTTAGTGGATGCCATCTATGAGAAGGGCAACGGATCGGGGG------------------------------------------------------------------------------------------------ACTACGACATACCASizeHit CountTotal NormTotal
No Reads
droTak1
AAAGTTATAC-------------------GCATTCAA-AATTGTCAATATATATCTATCTCCCTCGCACTTCCT--------------------------------------------------------------------------------------------------------------------------TTAGCTGAGTTACGATTATTAGTCGGGACACCAACCCGAGTACAGCGTTTGCACTCCCTCTAGCTGAGTGACGGGTATTAGGTAGTCGGGACACCTACCCGACTATAGCGTTCTCTCTTGTTTTTCTTTTAATTTAT------TCCATTTASizeHit CountTotal NormTotal
No Reads
droEug1
GTTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCTTCAGTGGATGCAATTTATAAGAAGGGAAATGCATCGGGGG------------------------------------------------------------------------------------------------ATTACGACATACCTSizeHit CountTotal NormTotal
No Reads
dm3
TTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCAGTTGATGCCATTTATGCGAAGGGAAATGAATCGGGGG------------------------------------------------------------------------------------------------ACTATGAGATACCASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
............................................................................................................................................................................................................................GGGAAATGAATCGGGGG------------------------------------------------------------------------------------------------AC............1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................AAATGAATCGGGGG------------------------------------------------------------------------------------------------ACTATGAG......2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................GAAGGGAAATGAATCGGGGG------------------------------------------------------------------------------------------------AC............2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...........................................................................................................................................................................................................................AGGGAAATGAATCGGGGG------------------------------------------------------------------------------------------------ACT...........2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................GCGAAGGGAAATGAATCGGGGG------------------------------------------------------------------------------------------------ACT...........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................TTGATGCCATTTATGCGAAGGGAAA.........................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................TGCGAAGGGAAATGAATCGGGGG------------------------------------------------------------------------------------------------AC............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.............................................................................................................................................................................................................................GGAAATGAATCGGGGG------------------------------------------------------------------------------------------------ACTATG........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................GCCATTTATGCGAAGGGA...........................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................GGAAATGAATCGGGGG------------------------------------------------------------------------------------------------ACT...........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................ATGAATCGGGGG------------------------------------------------------------------------------------------------ACTATGAGA.....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................ATGAATCGGGGG------------------------------------------------------------------------------------------------ACTATGAG......2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................TTTATGCGAAGGGAAATGAATCGGGG...............................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.....................................................................................................................................................................................................................ATGCGAAGGGAAATGAATCGGGGG------------------------------------------------------------------------------------------------AC............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..............................................................................................................................................................................................................................GAAATGAATCGGGGG------------------------------------------------------------------------------------------------ACTATGAG......2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................GAAGGGAAATGAATCGGGGG------------------------------------------------------------------------------------------------ACT...........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................AATGAATCGGGGG------------------------------------------------------------------------------------------------ACTATGAGATACC.2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................CGAAGGGAAATGAATCGGGGG------------------------------------------------------------------------------------------------A.............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................CGAAGGGAAATGAATCGGG................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
droSim2
TTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCAGTGGATGCGATTTATGCCAAGGGAAATGGATCGGGGG------------------------------------------------------------------------------------------------ACTACGAGATACCGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................................................................................................................................................................................................AAGGGAAATGGATCGGGGG------------------------------------------------------------------------------------------------AC............2112.00200000000000002000
..........................................................................................................................................................................................................................AAGGGAAATGGATCGGGGG------------------------------------------------------------------------------------------------ATA...........2211.00100000000000001000
..................................................................................................................................................................................................................TTTATGCCAAGGGAAATGGATCGGGG...............................................................................................................2611.00100000000000001000
..........................................................................................................................................................................................................................AAGGGAAATGGATCGGGGG------------------------------------------------------------------------------------------------A.............2011.00100000000000001000
........................................................................................................................................................................................................................CCAAGGGAAATGGATCGGGGT------------------------------------------------------------------------------------------------TT............2311.00100000000000001000
.................................................................................................................................................................................................................ATTTATGCCAAGGGA...........................................................................................................................1530.33100000001000000000
droSec2
TTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTCAGTGGATGCGATTTATGCGAAAGGAAGAGAATCGGGTG------------------------------------------------------------------------------------------------ACTATGAGATACCGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
TCACAAGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATATTTGCCTCTTTATTTAGTGGATGCCATCTATGAGAAGGGAAATGGATCGGGAG------------------------------------------------------------------------------------------------ACTACGAGATACCASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
TTGGCTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATACAGTGGATGCCATCTATGAGAAGGGAAATGGATCGGGGG------------------------------------------------------------------------------------------------ACTACGAGATACCASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 06/08/2015 at 03:12 PM