ID:

dpe_730

 Coordinate:

scaffold_1246:2965-3115 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-18.4 -18.3 -18.2

Flybase annnotation

CDS [Dper\GL20676-cds]; exon [dper_GLEANR_2447:1]; intron [Dper\GL20676-in]

Repeatable elements

NameClassFamilyStrand
(TCG)nSimple_repeatSimple_repeat+
mature
  1. dpe_730  scaffold_1246:3069-3090 +
  2. scaffold_647:426-447 +
  3. scaffold_647:8004-8025 +
star
  1. dpe_730  scaffold_1246:2969-2991 +
  2. scaffold_647:326-348 +

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
ACAAGCATCTCGACCTGGTGCTGGGCAAGGCCAAGCGACAGATGGCGATAGTGAGTAGATATTTTGGTTTAATCAGCAGCAGTAACACCGGGGCATCATCGTCATCGTCGTCGTCGTCGTCGTTATCGGCACTGGATAATAATAACAATGAGAAAATCACCAAAATACGATCACTCATCTACAAGAAGTTGATTCAGCCGCTATTGCTGTACGGCCATGTGGCCAATTTTCAATTTCTAATTTTCAATTCA
******************************************************.....((((((((((((.((((..((.(((((..((((((.....((....)).....))).)))..)))))..)).)))).)))...................))))))))).........*************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 M021
embryo
 V042
embryo
 V111
male body		 V057
head
..........................................................................................................................................................AATCACCAAAATACGATCACTC........................................................................... 22 0 3 2.00 6 6 0 0 0 0
..........................................................................................................................................................AATCACCAAAATACGATCACTCA.......................................................................... 23 0 3 2.00 6 6 0 0 0 0
......................................................GTAGATATTTTGGTTTAATCAGC.............................................................................................................................................................................. 23 0 2 1.50 3 2 1 0 0 0
..........................................................................................................................................................AATCACCAAAATACGATCACTCAT......................................................................... 24 0 3 1.33 4 4 0 0 0 0
.....................TGGGCAAGGCCAAGCGACAGATGG.............................................................................................................................................................................................................. 24 0 2 1.00 2 2 0 0 0 0
..........................................................................................................................................................AATCACCAAAATACGATCACTCATC........................................................................ 25 0 2 1.00 2 2 0 0 0 0
.....................................................................................................................................................................................CAAGAAGTTGATTCAGCCGCTATTGC............................................ 26 0 2 0.50 1 1 0 0 0 0
..................................................................................TAACACCGGGGCATCATCGTCAA.................................................................................................................................................. 23 1 2 0.50 1 1 0 0 0 0
..........CGACCTGGTGCTGGGCAAGG............................................................................................................................................................................................................................. 20 0 2 0.50 1 0 0 1 0 0
..................................................................................TAACACCGGGGCATCATCG...................................................................................................................................................... 19 0 2 0.50 1 1 0 0 0 0
..........................................................................................................................................................AATCACCAAAATACGATCACTCATCTA...................................................................... 27 0 2 0.50 1 1 0 0 0 0
......................................................GTAGATATTTTGGTTTAATCAGCAGC........................................................................................................................................................................... 26 0 2 0.50 1 1 0 0 0 0
............................................................................................................................................................................................TTGATTCACCCGCTATTGCTGTACGGCCA.................................. 29 1 2 0.50 1 1 0 0 0 0
.....................TGGGCAAGGCCAAGCGACAGATG............................................................................................................................................................................................................... 23 0 2 0.50 1 1 0 0 0 0
...............................................................................................................CGTCGTCGTCGTTATCGGCACTGGA................................................................................................................... 25 0 2 0.50 1 1 0 0 0 0
..................................................................................................................................................................................CTACAAGAGGTTGATTCAGCC.................................................... 21 1 2 0.50 1 1 0 0 0 0
................................................................................................................GTCGTCGTCGTTATCGGCACTGGA................................................................................................................... 24 0 2 0.50 1 0 0 0 1 0
...........................................................................................................TCGTCGTCGTCGTCGTTATCGGC......................................................................................................................... 23 0 2 0.50 1 0 1 0 0 0
.....................TGGGCAAGGCCAAGCGACAGATGGC............................................................................................................................................................................................................. 25 0 2 0.50 1 1 0 0 0 0
..........................................................................................................................................................AATCACCAAAATACGATCACTCATCTAC..................................................................... 28 0 2 0.50 1 1 0 0 0 0
......................GGGCAAGGCCAAGCGACAGATG............................................................................................................................................................................................................... 22 0 2 0.50 1 1 0 0 0 0
.......................................................................................................................................................................................AGAAGTTGATTCAGCCGCTATTG............................................. 23 0 2 0.50 1 1 0 0 0 0
.........................................................................................................................................................................................................TATTGCTGTACGGCCATGT............................... 19 0 2 0.50 1 1 0 0 0 0
......................................................................................................................GTCGTTATCGGCACTGGATAA................................................................................................................ 21 0 2 0.50 1 0 1 0 0 0
......................GGGCAAGGCCAAGCGACAGATGGC............................................................................................................................................................................................................. 24 0 2 0.50 1 1 0 0 0 0
.....................TGGGCAAAGCCAAGCGACAGATGG.............................................................................................................................................................................................................. 24 1 2 0.50 1 0 0 1 0 0
......................................................GTAGATATTTTGGTTTAATCAGCAG............................................................................................................................................................................ 25 0 2 0.50 1 1 0 0 0 0
......................................................GTAGATATTTTGGTTTAATCAGCA............................................................................................................................................................................. 24 0 2 0.50 1 1 0 0 0 0
..........................................................................AGCAGCAGTAACACCGGGG.............................................................................................................................................................. 19 0 2 0.50 1 1 0 0 0 0
...........................................................................................................................................................ATCACCAAAATACGATCACTCATCTA...................................................................... 26 0 2 0.50 1 1 0 0 0 0
.....................................................CGTAGATATTTTGGTTTAATCAGCA............................................................................................................................................................................. 25 1 2 0.50 1 1 0 0 0 0
...................................................................................................................................................................................TACAAGAAGTTGATTCAGCCGC.................................................. 22 0 2 0.50 1 1 0 0 0 0
........................GCAAGGCCAAGCGACAGATGGCGATAG........................................................................................................................................................................................................ 27 0 2 0.50 1 1 0 0 0 0
......................................................GTAGATATTTTGGTTTAATCAG............................................................................................................................................................................... 22 0 2 0.50 1 1 0 0 0 0
..................................................................................TAACACCGGGGCATCATCGTCATC................................................................................................................................................. 24 0 2 0.50 1 1 0 0 0 0
..........................................................................................................................................................AATCACCAAAATACGATCACTCATCT....................................................................... 26 0 2 0.50 1 1 0 0 0 0
...................................................................................................................................................................................TACAAGAAGTTGATTCAGCCGCT................................................. 23 0 2 0.50 1 1 0 0 0 0
..........................................................................................................................................................AATCACCAAAATACGATCACTA........................................................................... 22 1 3 0.33 1 1 0 0 0 0
..........................................................................................................................................................AATCACCAAAATACGATCACT............................................................................ 21 0 3 0.33 1 1 0 0 0 0
..........................................................................................................................................................AATCACCACAATACGATCACTCA.......................................................................... 23 1 3 0.33 1 1 0 0 0 0
............................................................................................GCATCTTCGTCATCGTCGTC........................................................................................................................................... 20 1 5 0.20 1 1 0 0 0 0
.............................................................................................CATCATCGTCATCGTCGTCGT......................................................................................................................................... 21 0 7 0.14 1 0 1 0 0 0
...................................................................................ATAACCGGGGGATCATCG...................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 1
.....................................................................................................TCATCGTCGTCGTCGTCGTC.................................................................................................................................. 20 0 20 0.05 1 0 0 1 0 0

Anti-sense strand reads

TGTTCGTAGAGCTGGACCACGACCCGTTCCGGTTCGCTGTCTACCGCTATCACTCATCTATAAAACCAAATTAGTCGTCGTCATTGTGGCCCCGTAGTAGCAGTAGCAGCAGCAGCAGCAGCAATAGCCGTGACCTATTATTATTGTTACTCTTTTAGTGGTTTTATGCTAGTGAGTAGATGTTCTTCAACTAAGTCGGCGATAACGACATGCCGGTACACCGGTTAAAAGTTAAAGATTAAAAGTTAAGT
***************************************************************************.....((((((((((((.((((..((.(((((..((((((.....((....)).....))).)))..)))))..)).)))).)))...................))))))))).........****************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 M021
embryo
 V042
embryo
 V111
male body		 V057
head
......................................GTCTACCGCTATCACTCATCTATAAA........................................................................................................................................................................................... 26 0 2 232.00 464 437 23 4 0 0
......................................................................................................................................................................................................................GGTACACCGGTTAAAAGTTAAAGATT........... 26 0 2 79.00 158 147 6 4 1 0
........................................CTACCGCTATCACTCATCTATAAA........................................................................................................................................................................................... 24 0 2 56.50 113 113 0 0 0 0
........................................................................................................................................................................................................................TACACCGGTTAAAAGTTAAAGATT........... 24 0 2 37.50 75 59 14 2 0 0
.................................................................................................................................................................................AGATGTTCTTCAACTAAGTCGGCGAT................................................ 26 0 2 26.00 52 27 20 2 3 0
.....................................................................................................................................................................................................................CGGTACACCGGTTAAAAGTTAAAGATT........... 27 0 2 21.50 43 43 0 0 0 0
.........................................................................................................................................................................................................................ACACCGGTTAAAAGTTAAAGATT........... 23 0 2 19.00 38 36 2 0 0 0
.................................................................................................................AGCAGCAGCAATAGCCGTGACCTAT................................................................................................................. 25 0 2 17.00 34 33 1 0 0 0
.....................................TGTCTACCGCTATCACTCATCTATAAA........................................................................................................................................................................................... 27 0 2 15.00 30 26 3 1 0 0
....................................CTGTCTACCGCTATCACTCATCTATAAA........................................................................................................................................................................................... 28 0 2 14.00 28 22 5 1 0 0
.......................................................................................................................................................................................................................GTACACCGGTTAAAAGTTAAAGATT........... 25 0 2 13.00 26 23 3 0 0 0
..........................................................................................................................................................................................TCAACTAAGTCGGCGATAACGACAT........................................ 25 0 2 11.00 22 22 0 0 0 0
..........................................................................................................................................TATTATTGTTACTCTTTTAGTGGTTT....................................................................................... 26 0 2 11.00 22 21 0 1 0 0
...........................................CCGCTATCACTCATCTATAAAAC......................................................................................................................................................................................... 23 0 2 10.00 20 20 0 0 0 0
.......................................TCTACCGCTATCACTCATCTATAAA........................................................................................................................................................................................... 25 0 2 10.00 20 20 0 0 0 0
......................................GTCTACCGCTATCACTCGTCTATAAA........................................................................................................................................................................................... 26 1 2 9.50 19 19 0 0 0 0
................................................................................................................................................................................AAGATGTTCTTCAACTAAGTCGGCGAT................................................ 27 1 2 9.00 18 2 15 0 1 0
..............................................................................................................AGCAGCAGCAGCAATAGCCGTGACCT................................................................................................................... 26 0 2 8.00 16 16 0 0 0 0
..................................................................................................................................................................................GATGTTCTTCAACTAAGTCGGCGAT................................................ 25 0 2 7.50 15 12 3 0 0 0
...........................................................................................................................................ATTATTGTTACTCTTTTAGTGGTTT....................................................................................... 25 0 2 7.50 15 15 0 0 0 0
......................................GTCTACCGCTATCACTCATCTATAA............................................................................................................................................................................................ 25 0 2 7.00 14 14 0 0 0 0
........................................CTACCGCTATCACTCATCTATAAAAC......................................................................................................................................................................................... 26 0 2 7.00 14 14 0 0 0 0
......................CCCGTTCCGGTTCGCTGTCT................................................................................................................................................................................................................. 20 0 2 7.00 14 0 14 0 0 0
...............................................................................GTCATTGTGGCCCCGTAGTAGCAGT................................................................................................................................................... 25 0 2 6.50 13 7 6 0 0 0
..........................................ACCGCTATCACTCATCTATAAAAC......................................................................................................................................................................................... 24 0 2 5.50 11 11 0 0 0 0
........................................................................................................AGCAGCAGCAGCAGCAGCAATAGCCGT........................................................................................................................ 27 0 2 5.50 11 6 4 0 1 0
........................................CTACCGCTATCACTCGTCTATAAA........................................................................................................................................................................................... 24 1 2 5.00 10 10 0 0 0 0
.....................................................................................................................................................................................................................CGGTACACCGGTTAAAAGTTAAAGAT............ 26 0 2 5.00 10 10 0 0 0 0
........................................................................................................................................................................................................................TACACCGGTTAAAAGTTAAAGAT............ 23 0 2 4.50 9 9 0 0 0 0
........................................CTACCGCTATCACTCATCTATAA............................................................................................................................................................................................ 23 0 2 4.50 9 9 0 0 0 0
...............................................................................................................GCAGCAGCAGCAATAGCCGTGACCTAT................................................................................................................. 27 0 2 4.50 9 9 0 0 0 0
............................................................................................................................................................................................................................CCGGTTAAAAGTTAAAGATT........... 20 0 2 4.50 9 2 7 0 0 0
......................................................................................................................................................................................................................GGTACACCGGTTAAAAGTTAAAGAT............ 25 0 2 4.50 9 9 0 0 0 0
.......................................................................................................................................................................GCTAGTGAGTAGATGTTCTTCAACT........................................................... 25 0 2 4.00 8 8 0 0 0 0
................................................................................................................................................................................AAGATGTTCTTCAACTAAGTCGGCGATA............................................... 28 1 2 4.00 8 0 8 0 0 0
........................................................................................................................................................................................CTTCAACTAAGTCGGCGATAACGACAT........................................ 27 0 2 4.00 8 8 0 0 0 0
......................................GTCTACCGCTATCACTCATCTATAAAAC......................................................................................................................................................................................... 28 0 2 4.00 8 8 0 0 0 0
.............................................................................................................................................................................................................................CGGTTAAAAGTTAAAGATT........... 19 0 2 3.50 7 5 2 0 0 0
.........................................................................................................................................................................................TTCAACTAAGTCGGCGATAACGACAT........................................ 26 0 2 3.50 7 7 0 0 0 0
.......AGAGCTGGACCACGACCCGTTCCGGT.......................................................................................................................................................................................................................... 26 0 2 3.50 7 7 0 0 0 0
.................................................................................................................................................................................AGATGTTCTTCAACTAAGTCGGCGATA............................................... 27 0 2 3.50 7 4 3 0 0 0
..........................................................................................................................................................................................................................CACCGGTTAAAAGTTAAAGATT........... 22 0 2 3.50 7 3 4 0 0 0
..........................................ACCGCTATCACTCATCTATAAA........................................................................................................................................................................................... 22 0 2 3.50 7 7 0 0 0 0
..................................................................................................................GCAGCAGCAATAGCCGTGACCTAT................................................................................................................. 24 0 2 3.50 7 5 0 2 0 0
..........................................................................................................................................................TTAGTGGTTTTATGCTAGTGAGTAGAT...................................................................... 27 0 2 3.50 7 4 3 0 0 0
............................................................................................................GCAGCAGCAGCAGCAATAGCCGT........................................................................................................................ 23 0 2 3.00 6 5 1 0 0 0
......CAGAGCTGGACCACGACCCGTTCCGGT.......................................................................................................................................................................................................................... 27 1 2 3.00 6 2 4 0 0 0
............................................................................................................................................................................................................................CCGGTTAAAAGTTAAAGATTAAAAGTTA... 28 0 1 3.00 3 0 3 0 0 0
.......................................................................................................................................................................................TCTTCAACTAAGTCGGCGATAACGACAT........................................ 28 0 2 3.00 6 6 0 0 0 0
.........................................................................................................................................................TTTAGTGGTTTTATGCTAGTGAGTAG........................................................................ 26 0 2 3.00 6 1 0 0 5 0
..............................................................................................................AGCAGCAGCAGCAATAGCCGTGACCTAT................................................................................................................. 28 0 2 3.00 6 6 0 0 0 0
...............................GTTCGCTGTCTACCGCTATCAC...................................................................................................................................................................................................... 22 0 2 2.50 5 1 4 0 0 0
.....................................TGTCTACCGCTATCACTCGTCTATAAA........................................................................................................................................................................................... 27 1 2 2.50 5 5 0 0 0 0
.................................................................................................................................................................................GGATGTTCTTCAACTAAGTCGGCGAT................................................ 26 1 2 2.50 5 0 5 0 0 0
.....................................................................................................................................................................................GTTCTTCAACTAAGTCGGCGAT................................................ 22 0 2 2.50 5 5 0 0 0 0
.....................................................................................................................................................................................................................AGGTACACCGGTTAAAAGTTAAAGATT........... 27 1 2 2.50 5 2 3 0 0 0
.................................................................................................................AGCAGCAGCAATAGCCGTGACCT................................................................................................................... 23 0 2 2.50 5 5 0 0 0 0
................................................................................TCATTGTGGCCCCGTAGTAGCAGT................................................................................................................................................... 24 0 2 2.50 5 3 2 0 0 0
............................................................................................................................................TTATTGTTACTCTTTTAGTGGTTT....................................................................................... 24 0 2 2.50 5 5 0 0 0 0
................................................................................................................CAGCAGCAGCAATAGCCGTGACCTAT................................................................................................................. 26 0 2 2.50 5 5 0 0 0 0
................................................................................................................CAGCAGCAGCAATAGCCGTG....................................................................................................................... 20 0 2 2.50 5 0 5 0 0 0
.........................................TACCGCTATCACTCATCTATAAA........................................................................................................................................................................................... 23 0 2 2.50 5 5 0 0 0 0
.........AGCTGGACCACGACCCGTTCCGGTT......................................................................................................................................................................................................................... 25 0 2 2.50 5 5 0 0 0 0
........................................................................................................................................................................................................................CACACCGGTTAAAAGTTAAAGATT........... 24 1 2 2.00 4 3 1 0 0 0
...........................................CCGCTATCACTCATCTATAAA........................................................................................................................................................................................... 21 0 2 2.00 4 4 0 0 0 0
..........................................................................................................................................................TTAGTGGTTTTATGCTAGTGAGTAGATGT.................................................................... 29 0 2 2.00 4 0 4 0 0 0
....................................................................................................................................................................TATGCTAGTGAGTAGATGTTCTTCAACT........................................................... 28 0 2 2.00 4 4 0 0 0 0
......................................GTCTACCGCTATCACTCATCTATA............................................................................................................................................................................................. 24 0 2 2.00 4 4 0 0 0 0
...........................................................................................................AGCAGCAGCAGCAGCAATAGCCGT........................................................................................................................ 24 0 2 2.00 4 4 0 0 0 0
.............................................................................................................................................TATTGTTACTCTTTTAGTGGTTT....................................................................................... 23 0 2 2.00 4 4 0 0 0 0
....................................................................................................................................................................................TGTTCTTCAACTAAGTCGGCGAT................................................ 23 0 2 2.00 4 2 2 0 0 0
.....GTAGAGCTGGACCACGACCCGT................................................................................................................................................................................................................................ 22 0 2 2.00 4 4 0 0 0 0
......................................GTCTACCGCTATCACTCTTCTATAAA........................................................................................................................................................................................... 26 1 2 2.00 4 4 0 0 0 0
..........GCTGGACCACGACCCGTTCCGGT.......................................................................................................................................................................................................................... 23 0 2 2.00 4 4 0 0 0 0
...............................................................................................................GCAGCAGCAGCAATAGCCGTGACCT................................................................................................................... 25 0 2 2.00 4 4 0 0 0 0
.......AGAGCTGGACCACGACCCGTTCCGGTT......................................................................................................................................................................................................................... 27 0 2 2.00 4 4 0 0 0 0
..................................CGCTGTCTACCGCTATCACTCATCTAT.............................................................................................................................................................................................. 27 0 2 2.00 4 3 0 1 0 0
................................................ATCACTCATCTATAAAACCAAATTAGT................................................................................................................................................................................ 27 0 2 2.00 4 4 0 0 0 0
...........CTGGACCACGACCCGTTCCGGT.......................................................................................................................................................................................................................... 22 0 2 2.00 4 1 3 0 0 0
...............................................................................................................................................................................GTAGATGTTCTTCAACTAAGTCGGCGAT................................................ 28 0 2 2.00 4 1 3 0 0 0
................................................................................................................................................................................TAGATGTTCTTCAACTAAGTCGGCGAT................................................ 27 0 2 2.00 4 0 4 0 0 0
.........................................................................................................................................................................................ATCAACTAAGTCGGCGATAACGACAT........................................ 26 1 2 1.50 3 3 0 0 0 0
........................................CTACCGCTATCACTCATCTATAAAA.......................................................................................................................................................................................... 25 0 2 1.50 3 3 0 0 0 0
.............................................................................................................................................................GTGGTTTTATGCTAGTGAGTAGATGT.................................................................... 26 0 2 1.50 3 2 0 0 1 0
..............................................................................................................AGCAGCAGCAGCAATAGCCGT........................................................................................................................ 21 0 2 1.50 3 3 0 0 0 0
..........................................................................................................................................TATTATTGTTACTCTTTTAGTGGTT........................................................................................ 25 0 2 1.50 3 3 0 0 0 0
..............................................................................................................AGCAGCAGCAGCAATAGCCGTGACC.................................................................................................................... 25 0 2 1.50 3 3 0 0 0 0
..............................................................................CGTCATTGTGGCCCCGTAGTAGCAGT................................................................................................................................................... 26 0 2 1.50 3 3 0 0 0 0
.....................ACCCGTTCCGGTTCGCTGTCT................................................................................................................................................................................................................. 21 0 2 1.50 3 1 0 2 0 0
...................................................................................................................................................................................ATGTTCTTCAACTAAGTCGGCGAT................................................ 24 0 2 1.50 3 3 0 0 0 0
.........................GTTCCGGTTCGCTGTCTACCGCT........................................................................................................................................................................................................... 23 0 2 1.50 3 3 0 0 0 0
...........................................................................................................................................................................................CAACTAAGTCGGCGATAACGACAT........................................ 24 0 2 1.50 3 3 0 0 0 0
............................................................................................................................................................AGTGGTTTTATGCTAGTGAGTAGAT...................................................................... 25 0 2 1.50 3 0 0 0 3 0
.......AGAGCTGGACCACGACCCGTTCCGG........................................................................................................................................................................................................................... 25 0 2 1.50 3 3 0 0 0 0
.....................................................................................................................................................................................................................CGGTACACCGGTTAAAAGATAAAGATT........... 27 1 2 1.50 3 3 0 0 0 0
......................................................................................................................................................................................................................GGTACACCGGTTAAAAGGTAAAGATT........... 26 1 2 1.50 3 3 0 0 0 0
............................................................................................................................................................AGTGGTTTTATGCTAGTGAGTAGATGT.................................................................... 27 0 2 1.50 3 3 0 0 0 0
......................................GTCTACCGCTATCACTCCTCTATAAA........................................................................................................................................................................................... 26 1 2 1.50 3 3 0 0 0 0
..........GCTGGACCACGACCCGTTCCGGTT......................................................................................................................................................................................................................... 24 0 2 1.50 3 3 0 0 0 0
..........................................................................................................................................................................AGTGAGTAGATGTTCTTCAACTAAGT....................................................... 26 0 2 1.50 3 0 0 0 3 0
........................................................................................................................................................................................................................TACACCGGTTAAAAGATAAAGATT........... 24 1 2 1.50 3 3 0 0 0 0
................................TTCGCTGTCTACCGCTATCACTCAT.................................................................................................................................................................................................. 25 0 2 1.50 3 3 0 0 0 0
...........................TCCGGTTCGCTGTCTACCGCTAT......................................................................................................................................................................................................... 23 0 2 1.00 2 0 2 0 0 0
.................................TCGCTGTCTACCGCTATCACTCATCT................................................................................................................................................................................................ 26 0 2 1.00 2 1 0 1 0 0
......................................GTCTGCCGCTATCACTCATCTATAAA........................................................................................................................................................................................... 26 1 2 1.00 2 2 0 0 0 0
....................................................................................................................................................................TATGCTAGTGAGTAGATGT.................................................................... 19 0 2 1.00 2 2 0 0 0 0
..............................................................................................................AGCAGCAGCAGCAATAGCCGTGAC..................................................................................................................... 24 0 2 1.00 2 2 0 0 0 0
...............................................................................................................GCAGCAGCAGCAATAGCCGT........................................................................................................................ 20 0 2 1.00 2 0 1 0 1 0
........................................................................................................................................................................................................................TACACCGGTTAAAAGGTAAAGATT........... 24 1 2 1.00 2 2 0 0 0 0
..............................................................................................................................................................TGGTTTTATGCTAGTGAGTAGATGT.................................................................... 25 0 2 1.00 2 2 0 0 0 0
.........................................................................................................................................ATATTATTGTTACTCTTTTAGTGGTTT....................................................................................... 27 1 2 1.00 2 2 0 0 0 0
...............................GTTCGCTGTCTACCGCTATCACTC.................................................................................................................................................................................................... 24 0 2 1.00 2 0 2 0 0 0
......................................................................................................................................................................................................................GGGACACCGGTTAAAAGTTAAAGATT........... 26 1 2 1.00 2 2 0 0 0 0
.................................................................................................................AGCAGCAGCAATAGCCGTGACCTA.................................................................................................................. 24 0 2 1.00 2 2 0 0 0 0
......................................GTCTACCGTTATCACTCATCTATAAA........................................................................................................................................................................................... 26 1 2 1.00 2 1 1 0 0 0
.............................................................................................................................................................GTGGTTTTATGCTAGTGAGTAGATG..................................................................... 25 0 2 1.00 2 2 0 0 0 0
...............................................................................................................................................................GGTTTTATGCTAGTGAGTAGATGT.................................................................... 24 0 2 1.00 2 1 0 0 1 0
............................................................................................................................................................AGTGGTTTTATGCTAGTGAGTAGATG..................................................................... 26 0 2 1.00 2 2 0 0 0 0
.................................................................................................................................................................................AGATGTTCTTCAACTAAGTCGGCGA................................................. 25 0 2 1.00 2 2 0 0 0 0
....................GACCCGTTCCGGTTCGCTGTCT................................................................................................................................................................................................................. 22 0 2 1.00 2 0 2 0 0 0
......................................GTCTACCGCTATCACTCATCTATAAAA.......................................................................................................................................................................................... 27 0 2 1.00 2 2 0 0 0 0
.....GTAGAGCTGGACCACGACCCGTTCCGGT.......................................................................................................................................................................................................................... 28 0 2 1.00 2 2 0 0 0 0
........................................................................................................AGCAGCAGCAGCAGCAGCAATAGCCG......................................................................................................................... 26 0 2 1.00 2 2 0 0 0 0
.................CACGACCCGTTCCGGTTCGCTGT................................................................................................................................................................................................................... 23 0 2 1.00 2 2 0 0 0 0
.................................................................................................................AGCAGCAGCAATAGCCGTGACCTATTAT.............................................................................................................. 28 0 2 1.00 2 2 0 0 0 0
.....................................................................................................................................................................ATGCTAGTGAGTAGATGTTCTTCAACT........................................................... 27 0 2 1.00 2 2 0 0 0 0
..........................................CCCGCTATCACTCATCTATAAAAC......................................................................................................................................................................................... 24 1 2 1.00 2 2 0 0 0 0
................................................................................................................CAGCAGCAGCAATAGCCGTGACCT................................................................................................................... 24 0 2 1.00 2 2 0 0 0 0
......................................................................................................................................................................................TTCTTCAACTAAGTCGGCGATAACGACAT........................................ 29 0 2 1.00 2 2 0 0 0 0
............................................................................................................................................................................................................................CCGGTTAAAAGTTAAAGATTAAAA....... 24 0 2 1.00 2 0 2 0 0 0
................................................................................................................CAGCAGCAGCAATAGCCGTGACC.................................................................................................................... 23 0 2 1.00 2 2 0 0 0 0
...........................................................................................................AGCAGCAGCAGCAGCAATAGCCGTGACC.................................................................................................................... 28 0 2 1.00 2 2 0 0 0 0
.....................................................................................................................................................................................................................CGGTACACCGGTTAAAAGGTAAAGATT........... 27 1 2 1.00 2 2 0 0 0 0
..................................................................................................................GCAGCAGCAATAGCCGTGACCTATT................................................................................................................ 25 0 2 1.00 2 2 0 0 0 0
...........................................................................CGTCGTCATTGTGGCCCCGTAGT......................................................................................................................................................... 23 0 2 1.00 2 1 0 1 0 0
.......................................................................................................................................................................................TCTTCAACTAAGTCGGCGATAACGA........................................... 25 0 2 1.00 2 2 0 0 0 0
...................................................................................................................................................................................................................GCCGGTACACCGGTTAAAAGTTAAAGAT............ 28 0 2 1.00 2 2 0 0 0 0
.........................................TACCGCTATCACTCATCTATAAAAC......................................................................................................................................................................................... 25 0 2 1.00 2 2 0 0 0 0
....................................................................................................................................................................TATGCTAGTGAGTAGATGTTCTTCAAC............................................................ 27 0 2 1.00 2 2 0 0 0 0
..........................................ACCGCTATCACTCATCTATAAAA.......................................................................................................................................................................................... 23 0 2 1.00 2 2 0 0 0 0
..............................................................................................................AGCAGCAGCAGCAATAGCCGTGACCTA.................................................................................................................. 27 0 2 1.00 2 2 0 0 0 0
...........................................................................................................................................................TAGTGGTTTTATGCTAGTGAGTAGAT...................................................................... 26 0 2 1.00 2 0 0 0 2 0
..........................................................................................................................................................TTAGTGGTTTTATGCTAGTGAGTAG........................................................................ 25 0 2 1.00 2 2 0 0 0 0
...............................................................................................................GCAGCAGCAGCAATAGCCGTGACC.................................................................................................................... 24 0 2 1.00 2 2 0 0 0 0
......................................GTCTACCGCTATCACTCAT.................................................................................................................................................................................................. 19 0 2 1.00 2 0 2 0 0 0
......................................................................................................................................................................TGCTAGTGAGTAGATGTTCT................................................................. 20 0 2 1.00 2 2 0 0 0 0
..............................................................................................................................................................................................................................GGTTAAAAGTTAAAGATT........... 18 0 2 1.00 2 2 0 0 0 0
..........................................................................................................................................TATTATTGTTACTCTTTAAGTGGTTT....................................................................................... 26 1 2 1.00 2 2 0 0 0 0
.......................................................................................................................................................................................TCTTCAACTAAGTCGGCGATAACGACA......................................... 27 0 2 1.00 2 2 0 0 0 0
............................................................................GTCGTCATTGTGGCCCCGTAGT......................................................................................................................................................... 22 0 2 1.00 2 2 0 0 0 0
............................................CGCTATCACTCATCTATAAAACCAAAT.................................................................................................................................................................................... 27 0 2 1.00 2 2 0 0 0 0
.............................................................................................................................AGCCGTGACCTATTATTATTGTTACTCT.................................................................................................. 28 0 2 1.00 2 2 0 0 0 0
.....................................TGTCTACCGCTATCACTCATCTATAA............................................................................................................................................................................................ 26 0 2 1.00 2 2 0 0 0 0
........GAGCTGGACCACGACCCGTTCCGGT.......................................................................................................................................................................................................................... 25 0 2 1.00 2 2 0 0 0 0
............................................CGCTATCACTCATCTATAAAAC......................................................................................................................................................................................... 22 0 2 1.00 2 2 0 0 0 0
............................................................................................................................................................................................................................CCGGTTAAAAGTTAAAGATTA.......... 21 0 2 1.00 2 0 2 0 0 0
.............GGACCACGACCCGTTCCGGTTCGCT..................................................................................................................................................................................................................... 25 0 2 1.00 2 2 0 0 0 0
....................................................................................................................AGCAGCAATAGCCGTGACCTAT................................................................................................................. 22 0 2 1.00 2 2 0 0 0 0
.......................................................................................................................AGCAATAGCCGTGACCTATTATTATTGT........................................................................................................ 28 0 2 1.00 2 2 0 0 0 0
.....................................TGTCTACCGCTATCACTCATCTATA............................................................................................................................................................................................. 25 0 2 1.00 2 2 0 0 0 0
..................................CGCTGTCTACCGCTATCACTCAT.................................................................................................................................................................................................. 23 0 2 1.00 2 2 0 0 0 0
......................................GTCTACCGCTATCACTCATCTA............................................................................................................................................................................................... 22 0 2 1.00 2 0 0 2 0 0
.............................................................................................................................................................................................................................CGGTTAAAAGTTAAAGAT............ 18 0 2 1.00 2 2 0 0 0 0
........................................................................................................................................................................................CTTCAACTAAGTCGGCGAGAACGACAT........................................ 27 1 2 1.00 2 2 0 0 0 0
........................................................................................................................................ATTATTATTGTTACTCTTTTAGTGGTTT....................................................................................... 28 0 2 1.00 2 2 0 0 0 0
.........................................................CTATAAAACCAAATTAGTCGTCGTC......................................................................................................................................................................... 25 0 2 1.00 2 2 0 0 0 0
.................................TCGCTGTCTACCGCTATCACTCAT.................................................................................................................................................................................................. 24 0 2 1.00 2 2 0 0 0 0
..............................................................................................................AGCAGCAGCAGCAATAGCCGTGA...................................................................................................................... 23 0 2 1.00 2 2 0 0 0 0
...................................................................................................................CAGCAGCAATAGCCGTGACCTAT................................................................................................................. 23 0 2 1.00 2 2 0 0 0 0
.............................................GCTATCACTCATCTATAAAACCAAAT.................................................................................................................................................................................... 26 0 2 1.00 2 2 0 0 0 0
..............................GGTTCGCTGTCTACCGCTATCACTCAT.................................................................................................................................................................................................. 27 0 2 1.00 2 2 0 0 0 0
................................................................................................................AAGCAGCAGCAATAGCCGTGACCTAT................................................................................................................. 26 1 2 1.00 2 2 0 0 0 0
................CCACGACCCGTTCCGGTTCGCT..................................................................................................................................................................................................................... 22 0 2 1.00 2 2 0 0 0 0
......................................GTCTACCGCTATCACTCATCTATAAG........................................................................................................................................................................................... 26 1 2 1.00 2 2 0 0 0 0
.........................................................................................................................................................................................................................ACACCGGTTAAAAGTTAAAGAT............ 22 0 2 1.00 2 2 0 0 0 0
.......................................................................................................TAGCAGCAGCAGCAGCAGCAAT.............................................................................................................................. 22 0 3 0.67 2 1 0 0 0 1
..................................................................................................................GCAGCAGCAATAGCCGCGACCTATT................................................................................................................ 25 1 2 0.50 1 1 0 0 0 0
...............................................................................................................................................................................GTAGTTGTTCTTCAACTAAGTCGGCGAT................................................ 28 1 2 0.50 1 1 0 0 0 0
....................................................................................................................AGCAGCAATAGCCGTGACCTATTA............................................................................................................... 24 0 2 0.50 1 1 0 0 0 0
......................................................................................................................................................................................................................GGTACACCGGTTAAAAGATAAAGATT........... 26 1 2 0.50 1 1 0 0 0 0
..........................................................................................................................................AATTATTGTTACTCTTTTAGTGGTTT....................................................................................... 26 1 2 0.50 1 1 0 0 0 0
.........................................................................................................................................................................TAGTGAGTAGATGTTCTTCAACT........................................................... 23 0 2 0.50 1 1 0 0 0 0
......................................GTCTACCGCTATCTCTCATCTATAAA........................................................................................................................................................................................... 26 1 2 0.50 1 1 0 0 0 0
...............................................................................................................GCAGCAGCAGCAATAGCCGTGA...................................................................................................................... 22 0 2 0.50 1 1 0 0 0 0
....................................................................................CGTGGCCCCGTAGTAGCAGT................................................................................................................................................... 20 1 2 0.50 1 0 1 0 0 0
.............................................................................................................................................................................................ACTAAGTCGGCGATAACGACAT........................................ 22 0 2 0.50 1 1 0 0 0 0
..........................................................................................................................................................................................TCAACTAAGTCGGCGATAACGACAG........................................ 25 1 2 0.50 1 1 0 0 0 0
..................................................................................AAAATGGCCCCGTAGTAGCAGTAGCAGC............................................................................................................................................. 28 3 2 0.50 1 0 1 0 0 0
.....................................................................................................................................................................................GTTCTTCAACTAAGTCGGCGATAACG............................................ 26 0 2 0.50 1 1 0 0 0 0
................................................................................................................................................................................GAGATGTTCTTCAACTAAGTCGGCGATA............................................... 28 1 2 0.50 1 0 1 0 0 0
......................................................................................................................................................................................................................GGTGCACCAGTTAAAAGTTAAAGAT............ 25 2 2 0.50 1 1 0 0 0 0
...............................................................................................................................................................................ATAGATGTTCTTCAACTAAGTCGGCGAT................................................ 28 1 2 0.50 1 1 0 0 0 0
...............................GTTCGCTGTCTACCGCTATCACTCATCT................................................................................................................................................................................................ 28 0 2 0.50 1 1 0 0 0 0
...............................................................................................................................................................................AAAGATGTTCTTCAACTAAATCGGCGAT................................................ 28 3 2 0.50 1 1 0 0 0 0
..........................................................................................................................................................................................................................AACCAGTTAAAAGTTAAAGATTAAAAG...... 27 2 2 0.50 1 1 0 0 0 0
...............................................................................GTCATTGTGGCCCCGTAGT......................................................................................................................................................... 19 0 2 0.50 1 1 0 0 0 0
....CGTAGAGCTGGACCACGACCCGT................................................................................................................................................................................................................................ 23 0 2 0.50 1 0 0 1 0 0
.........................................................................................................................................................................................ATCAACTAAGTCGGCGAGAACGACAT........................................ 26 2 2 0.50 1 1 0 0 0 0
....................................ATGTCTACCGCTATCACTCATCTATAAA........................................................................................................................................................................................... 28 1 2 0.50 1 1 0 0 0 0
......................................GGCTACCGCTATCACTCATCTATAAA........................................................................................................................................................................................... 26 1 2 0.50 1 1 0 0 0 0
.........................................................CTATAAAACCAAATTATTCGTCGTC......................................................................................................................................................................... 25 1 2 0.50 1 1 0 0 0 0
........................................................................................TCCCCGTAGTAGCAGTAGCAGCAGC.......................................................................................................................................... 25 1 2 0.50 1 1 0 0 0 0
......................................................................................................................................................................................................................GGTACAACGGTTAAAAGTTAAAGATT........... 26 1 2 0.50 1 1 0 0 0 0
..................................................................................................................................................................TTTATGCTAGTGAGTAGATG..................................................................... 20 0 2 0.50 1 1 0 0 0 0
...........................................................................................................................................ATTATTGTTACTCTTTGAGTGGTTT....................................................................................... 25 1 2 0.50 1 1 0 0 0 0
............................................................................ATCGTCATTGTGGCCCCGTAGT......................................................................................................................................................... 22 1 2 0.50 1 1 0 0 0 0
....................................................................................................................................................................................GGTTCTTCAACTAAGTCGGCGATA............................................... 24 1 2 0.50 1 0 1 0 0 0
........................................................................................................................................................................................................................TACACCCGTTAAAAGTTAAAGAT............ 23 1 2 0.50 1 1 0 0 0 0
...........................................................................................................................................ATTATTGTTACTCTTTTAGTGGTTTT...................................................................................... 26 0 2 0.50 1 1 0 0 0 0
....................................................................................................................AGCAGCAGTAGCCGTGACCTAT................................................................................................................. 22 1 2 0.50 1 0 0 1 0 0
................................................................................................................................................................GTTTTATGCTAGTGAGTAGATGTTCT................................................................. 26 0 2 0.50 1 1 0 0 0 0
.....................................................................................................................GCAGCAATAGCCTTGACCT................................................................................................................... 19 1 2 0.50 1 0 0 0 1 0
.................................................................................................................................................................................AGATGTTCTTCAACTAAGTCGGCTAT................................................ 26 1 2 0.50 1 0 1 0 0 0
..............................................................................................................AGCAGCAGCAGCAATAGGCGTGACCT................................................................................................................... 26 1 2 0.50 1 1 0 0 0 0
.......................................................................................................................................TATTATTATTGTTACTCTTTTAGTGGTT........................................................................................ 28 0 2 0.50 1 1 0 0 0 0
..........................................ACCGCTATCACACATCTATA............................................................................................................................................................................................. 20 1 2 0.50 1 1 0 0 0 0
...............................GTTCGCTGTCTACCGCTATCACTCAT.................................................................................................................................................................................................. 26 0 2 0.50 1 1 0 0 0 0
...............................GTTCGCTGTCTACCGCTAT......................................................................................................................................................................................................... 19 0 2 0.50 1 1 0 0 0 0
..........................................ACCGCTATCACTCATGTATAAAAC......................................................................................................................................................................................... 24 1 2 0.50 1 1 0 0 0 0
.............................................................................................................................................................GTGGTTTTATGCTAGTGAGTAG........................................................................ 22 0 2 0.50 1 1 0 0 0 0
........CAGCTGGACCACGACCCGTTCCGGTT......................................................................................................................................................................................................................... 26 1 2 0.50 1 1 0 0 0 0
................................................................................................................................................TGTTACTCTTTTAGTGGTTTTATGCT................................................................................. 26 0 2 0.50 1 1 0 0 0 0
...........................................CCGCTATCACTCATCTATAAAACCAAATC................................................................................................................................................................................... 29 1 2 0.50 1 1 0 0 0 0
........................CGTTCCGGTTCGCTGTCTACCGCT........................................................................................................................................................................................................... 24 0 2 0.50 1 1 0 0 0 0
..................................................................................................................GCAGCAGCAATAGCCGTGACC.................................................................................................................... 21 0 2 0.50 1 1 0 0 0 0
......................................................................................................................................................................................................................AGTACACCGGTTAAAAGTTAAAGATT........... 26 1 2 0.50 1 0 1 0 0 0
.........................................................................................................................................................................................................................ACACCGGTTAAAAGGTAAAGATT........... 23 1 2 0.50 1 1 0 0 0 0
...................................................................................................................................................TACTCTTTTAGTGGTTTTATGCTAGTGA............................................................................ 28 0 2 0.50 1 1 0 0 0 0
..................................................................................................................GCAGCAGCAATAGCCGTGACCTA.................................................................................................................. 23 0 2 0.50 1 1 0 0 0 0
......................................................................................................................................................................................................................GGTACACCGGTTAAAAGCTAAAGATT........... 26 1 2 0.50 1 1 0 0 0 0
.................................................................................................................................................GTTACTCTTTTAGTGGTTTCATGCTAGT.............................................................................. 28 1 2 0.50 1 1 0 0 0 0
..........................................................................................................................................TATTATTGTTACTCTTTGAGTGGTTT....................................................................................... 26 1 2 0.50 1 1 0 0 0 0
........................................CTGCCGCTATCACTCATCTATAAA........................................................................................................................................................................................... 24 1 2 0.50 1 1 0 0 0 0
.........................................................................................................................................................TTTAGTCGTTTTATGCTAGTGAGTAGAT...................................................................... 28 1 2 0.50 1 0 1 0 0 0
.....................................................................................................................................................................................................GGCGATAACGACATGCCGGTACACC............................. 25 0 2 0.50 1 1 0 0 0 0
........................................ATACCGCTATCACTCATCTATAAA........................................................................................................................................................................................... 24 1 2 0.50 1 1 0 0 0 0
......................................GTCTCCCGCTATCACTCATCTATAAA........................................................................................................................................................................................... 26 1 2 0.50 1 0 0 1 0 0
............TGGACCACGACCCGTTCCGGTT......................................................................................................................................................................................................................... 22 0 2 0.50 1 1 0 0 0 0
..........................................................................................................................................TATCATTGTTACTCTTGTAGTGGTT........................................................................................ 25 2 2 0.50 1 1 0 0 0 0
..............................GGTTCGCTGTCTACCGCTATCAC...................................................................................................................................................................................................... 23 0 2 0.50 1 1 0 0 0 0
.................................................................................................................AGCAGCAGCAATAGCCATGACCTAT................................................................................................................. 25 1 2 0.50 1 1 0 0 0 0
.GTTCGTCGTGCTGGCCCACGACCCGT................................................................................................................................................................................................................................ 26 3 2 0.50 1 0 0 1 0 0
................................................................................................................................................................................AAGATGTTCTTCAACTAGGTCGGCGATA............................................... 28 2 2 0.50 1 0 1 0 0 0
.......TGAGCTGGACCACGACCCGTTCCGGT.......................................................................................................................................................................................................................... 26 1 2 0.50 1 1 0 0 0 0
...................................................................................AAATGGCCCCGTAGTAGCAGTAGCAGC............................................................................................................................................. 27 3 2 0.50 1 0 1 0 0 0
..........................................................................................................................................TATTATTGTTACTCTTTCAGTGGTTT....................................................................................... 26 1 2 0.50 1 1 0 0 0 0
...............................................................................................................GCAGCAGCAGCAATAGCCGTGACCCAT................................................................................................................. 27 1 2 0.50 1 1 0 0 0 0
........................................................................................................................................................................................CTTCAACTAAGTCGGCGATAACGAC.......................................... 25 0 2 0.50 1 1 0 0 0 0
.....................................................................................................................................................................................................................AGGTACACCGGTTAAAAGGTAAAGATT........... 27 2 2 0.50 1 1 0 0 0 0
.............................................................................................................................................................................................................CGACATGCCGGTACACCGGTTAAAAGT................... 27 0 2 0.50 1 1 0 0 0 0
...................CGACCCGTTCCGGTTCGCTGTA.................................................................................................................................................................................................................. 22 1 2 0.50 1 1 0 0 0 0
.....................................................TAATCTATAAAACCAAATTAGTCGT............................................................................................................................................................................. 25 1 2 0.50 1 1 0 0 0 0
................................TTCGCTGTCTACCGCTATCACTCATCT................................................................................................................................................................................................ 27 0 2 0.50 1 1 0 0 0 0
...........................................................................................................AGCAGCAGCAGCAGCAATAGCCGTGA...................................................................................................................... 26 0 2 0.50 1 1 0 0 0 0
........................................................................................................AGCAGCAGCAGCAGCAGCAATAGCC.......................................................................................................................... 25 0 2 0.50 1 1 0 0 0 0
....................GACCCGTTCCGGTTCGGTGTCT................................................................................................................................................................................................................. 22 1 2 0.50 1 0 1 0 0 0
..........GCTGGACCACGACCGGTTCCGGT.......................................................................................................................................................................................................................... 23 1 2 0.50 1 1 0 0 0 0
......................................GTCTACCGCTATCACTCATCTATAAACG......................................................................................................................................................................................... 28 2 2 0.50 1 1 0 0 0 0
......................................GTCTACCGCTATCGCTCATCTATAAA........................................................................................................................................................................................... 26 1 2 0.50 1 1 0 0 0 0
...........................................................................................................AGCAGCAGCAGCAGCAATAGCCG......................................................................................................................... 23 0 2 0.50 1 1 0 0 0 0
..............................GGTTCGCTGTCTACCGCTA.......................................................................................................................................................................................................... 19 0 2 0.50 1 1 0 0 0 0
.....................................TGTCTACCGCTATCACTCATCTATAAAAC......................................................................................................................................................................................... 29 0 2 0.50 1 1 0 0 0 0
......................................GTCTACCGCTATCACTCACCTATAAAA.......................................................................................................................................................................................... 27 1 2 0.50 1 1 0 0 0 0
......................................GTGTACCGCTATCACTCATCTATAAA........................................................................................................................................................................................... 26 1 2 0.50 1 1 0 0 0 0
..................................................................................................................................................................TTTATGCTAGTGAGTAGATGTTCT................................................................. 24 0 2 0.50 1 1 0 0 0 0
............................................................................................................................................TTATTGTTACTCTTTCAGTGGTTT....................................................................................... 24 1 2 0.50 1 1 0 0 0 0
.........................................................................................................................................................................................................................ACACCGGTTAAAAATTAAAGATT........... 23 1 2 0.50 1 1 0 0 0 0
....................................................................................................................................................................................TGTTCTTCAACTAAGTCGGCTATAA.............................................. 25 1 2 0.50 1 0 1 0 0 0
......................................GTCCACCGCTATCACTCATCTATAAA........................................................................................................................................................................................... 26 1 2 0.50 1 1 0 0 0 0
..TTCGTAGAGCTGGACCACGACCCGT................................................................................................................................................................................................................................ 25 0 2 0.50 1 1 0 0 0 0
.......................................................................................................................................TATTATTATTGTTACTCTTTTAGTGGTTT....................................................................................... 29 0 2 0.50 1 1 0 0 0 0
.................................................................................................................................................................................AGCTGTTCTTCAACTAAGTCGGCGAT................................................ 26 1 2 0.50 1 0 1 0 0 0
....................................................................................................................................................................................TGTTCTTCAACTAAGTCGGCGATAACGA........................................... 28 0 2 0.50 1 1 0 0 0 0
.................................TCGCTGTCTACCGCTATCACTCATC................................................................................................................................................................................................. 25 0 2 0.50 1 1 0 0 0 0
.................................................................................AATTGTGGCCCCCTAGTAGCAGT................................................................................................................................................... 23 2 2 0.50 1 1 0 0 0 0
.......................................................................................................................................................................GCTAGTGAGTAGATGTTCTTCAAC............................................................ 24 0 2 0.50 1 1 0 0 0 0
................................................................................................................CAGCAGCAGCAATAGCCGTGA...................................................................................................................... 21 0 2 0.50 1 1 0 0 0 0
................................................................................................................................................................................AAGATGTTCTTCAACTAACTCGGCGAT................................................ 27 2 2 0.50 1 1 0 0 0 0
...............................................................................GTCATTGTGGCCCCGTAGTAGCAG.................................................................................................................................................... 24 0 2 0.50 1 1 0 0 0 0
.....................................................................................................................GCAGCAATAGCCGTGACCTAT................................................................................................................. 21 0 2 0.50 1 1 0 0 0 0
.........................GTTCCGGTTCGCTGTCTACCGCTAT......................................................................................................................................................................................................... 25 0 2 0.50 1 1 0 0 0 0
.............................CGGTTCGCTGTCTACCGCTATCACTC.................................................................................................................................................................................................... 26 0 2 0.50 1 1 0 0 0 0
............................................................................GTCGTCATTGTGGCCCCGT............................................................................................................................................................ 19 0 2 0.50 1 1 0 0 0 0
.........................................................................................................................................................................................TTCAACTAAGTCGGCGATAAACAT.......................................... 24 3 2 0.50 1 1 0 0 0 0
..................................................................................................................GCAGCAGCAATGGCCGTGAC..................................................................................................................... 20 1 2 0.50 1 1 0 0 0 0
....................................................................................................................TGCAGCAATAGCCGTGACCTAT................................................................................................................. 22 1 2 0.50 1 1 0 0 0 0
................................................................................ACATTGTGGCCCCGTAGTAGCAGT................................................................................................................................................... 24 1 2 0.50 1 1 0 0 0 0
.............................................................................................GTAGTAGCAGTAGCAGCAGC.......................................................................................................................................... 20 0 8 0.50 4 2 0 0 2 0
..............................GGTTCGCTGTCTACCGCTAT......................................................................................................................................................................................................... 20 0 2 0.50 1 1 0 0 0 0
....................................................................................................................................................................................TCTTCTTCAACTAAGTCGGCGATAAC............................................. 26 1 2 0.50 1 0 1 0 0 0
....................................................................................................................................................................................................CGGCGATAACTACATGCCGGTACAC.............................. 25 1 2 0.50 1 1 0 0 0 0
................................................................................................................................................................................CAGATGTTCTTCAACTAAGTCGGCGAT................................................ 27 1 2 0.50 1 0 1 0 0 0
.....GTAGAGCTGGACCACGACCCGTT............................................................................................................................................................................................................................... 23 0 2 0.50 1 1 0 0 0 0
...............................GTTCGCTGTCTACAGCTATCACTCAT.................................................................................................................................................................................................. 26 1 2 0.50 1 0 1 0 0 0
...................................GCTGTCTACCGCTATCACTCATCTATA............................................................................................................................................................................................. 27 0 2 0.50 1 1 0 0 0 0
....................................CTGTCTACCGCTATCACTCATCTAT.............................................................................................................................................................................................. 25 0 2 0.50 1 1 0 0 0 0
......................................TTCTACCGCTATCACTCATCTATAAAAC......................................................................................................................................................................................... 28 1 2 0.50 1 1 0 0 0 0
....................................................................................................................................................................TATGCTAGTGAGTAGATGTGCTTCAACT........................................................... 28 1 2 0.50 1 1 0 0 0 0
......................................................................................................................................................................TGCTAGTGAGTAGATGTTCTTCAAC............................................................ 25 0 2 0.50 1 1 0 0 0 0
........................................CTACCGCTATCACTCCTCTATAAA........................................................................................................................................................................................... 24 1 2 0.50 1 1 0 0 0 0
......................................................................................................................CAGCAATAGCCGTGACCT................................................................................................................... 18 0 2 0.50 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_1246:2915-3165 + dpe_730 ACAAGCA---TCTCGACCTGGTGCT------GGGCAAGGCCAAGCGACA----GAT-GGCGATAGTGAGTAGATATTTTGG------------------------TTTAATCAGC--AGCAGTAACACCGGGGCAT-----------------------C---ATC---GTCATCGTCGTCG---T-C------G----------TCGTCGTT------ATCGG----------C-----------ACTGGATAATAATAACAATGAGAA--AA------TCACCAAAATACGA-------------------TCACTCATCTACAAGAAGTTGATTCAGCCGCTATTGCTGTACGGCCATGTG-GCCAATTTTCAATTTCTAATTTTCAATTCA
dp5 2:17197326-17197524 + ACAAGCA---TCTCGATCTGGTGCT------GGGCAAAGCCAAGCGACA----AAT--GCGATAGTGAGTAGATATTTTGG------------------------TTTAATCAG------------------------------------------C---AGCAGT---A---------ACATCAT-C------GTCGTCGTCAT----C------------GG----------C-----------ACTGGATAATAATAACAATGAGAA--AA------TCACCAAAATACGA-------------------TCACTCATCTACAAGAAGTTGATTCAGCCGTTGTTGCTGTATGGCCATGTG-GC----------------------------
droWil2 scf2_1100000013468:44-227 - AAAGTCA---CATAGAGCAAAGCCT------AAAAATGGCAAAATGTCC----AATTAGCAAAATCTACCAGATATTCAGGCCACGAGTTAAATCAC--------ATTAATCAAA--CGCAAACATTGCGAA-----------------------------ATC---------------TCC-------TCATCT----------CATTACTCGTCCG-AGAGT----------GACTATTTAGAAAGTAAAAAAATATTACAAGAAGAA--CA------TGAC---------------------------------------------------------------------------------------CAA---------------------
droVir3 scaffold_13042:807139-807251 - TCAG----------------------CGGCG----------------------------------------------------------------------------------------------------------------------GCGG---CGAC---GTT---G---------TCG----TTGTCGTCG----------TCGTCGTCGTCAATGT-------------C-----------ACACAACAACAATAACAATAATAA--TA------ACAACA-------------AAAGCCAAAACACAACTCTCAACAACAAC--------------------------------------------AA---------------------
droMoj3 scaffold_6680:5826413-5826562 + ACGAGCA---CCTCCT--TGGTGCG------GGGCGG-------CGGCCGGTATGT-GGGGCTG----TTCAGCGAGTTTG-----------G----CACTTCTGCGCAGGCGGCATGGCGGCAACGGAACGGAACCGGATG-TGCG------------CGTCGGC---G---------T-------CGGCGTCG----------TCGTCGTCGTTAGCGTTGG----------C-----------GTT---------------------------------------------------------------------------------------------------------------------------GG---------------------
droGri2 scaffold_14853:6515575-6515705 - CAT----------------------CG-TC-------------------------------------------------------------------------------------------------------------------------AGCATC------GTT---T---------GCA---T-C------GTCGTCGCTGT----CGCC---GCTGGCCGCAATGGCGGCA-----------A-----TGCCAACAACAATGCCAA--CG------CTGCCCGCCAGCGTTGATGAAG-----------------------------------CTGCCGCCGCTGCTGCGCTG----GCG-GCCAACATT---------------------
droAna3 scaffold_13417:2487103-2487166 + TCAGTCACAG---------------TCACAG----------------------------------------------------------------------------------------------------------------------CCGC---TGCC---GCC---G---------TCG----TCGTCGTCG----------TCGTCGTCGCCATAACCGG----------C-----------GCT----------------------------------------------------------------------------------------------------------------------------G---------------------
droBip1 scf7180000396589:1320627-1320707 - ATCATCATCA---------------TCAGCA----------------------------------------------------------------------------------------------------------------------TCAA---CCTC---ATC---A---------TCG----TCGTCGTCG----------TCGACGTCGTCTTCGTCAG----------A-----------------GATCAGAGACAAGAGGAG--A---------------------------------------------------------------------------------------------------AT---------------------
droKik1 scf7180000302711:203654-203755 + AAG----------------------CG-CC-GGA------------------------GTAATTGTGAGTTAAAACTTTG-----------------CG--------------GAAAAACAACAACAATACAGCAG----------CC-GGAG---CAGCAGCATC---G---------TTATCAT-C------ATCATCATCAT----C------------GG----------C-----------ATCG---------------------------------------------------------------------------------------------------------------------------G---------------------
droFic1 scf7180000453811:41393-41484 - CAG----------------------CA-GC------------------------------------------------------------------------------------------AACAGCAGCAGGGAGT-----------------------C---ACT---GTCTCCGGCGGCG---G-C------A----------CCTTGCCC------ACAGT----------T-----------GCTGGCCAGCAGCAACAGCAGCAG--CA------TCAGCA-------------------------------------------------------------------------------------GAA---------------------
droEle1 scf7180000490970:664767-664859 + AGT----------------------TG-AC--------------------------------------------ACTTTG-----------------CA-TCTTGTGCAATCACC----------------------AAATATTGTCGGAGAA---TGTCAACGTC---G---------TCG-------TCGCCG----------TCGCCGTCGTC------AG----------C-----------ATCA------------------------------ACTTTG-------------------------------------------------------------------------------------TAT---------------------
droRho1 scf7180000777516:388-457 + CAA----------------------CA-GC------------------------------------------------------------------------------------------AACAACAATGCAGCAG-----------------------C---AGC---GCTGCCGACGTCG---T-C------G----------TTGTTGTT------GTGCG----------T-----------TGTG-------------------------------------------------------------------------------------------------------------------TATAAAAAT---------------------
droBia1 scf7180000298389:1372189-1372262 + GGCAG----------------------------------------------------------------------------------------------------------------------------------------------------------CAACATC---G---------TCGT----CGCCGTCG----------TCGTCGTC------GTCAG----------C-----------A-----AATCAAAATCCAAACCAA--AA------TCACTTGAAAAC--------------------------------------------------------------------------------GA---------------------
droTak1 scf7180000413143:499-677 + AAAATCA---CATTATGAATACCCT------TAAGAAGGCTAAACTACA----ATTCAACAAAATACACCAGATATTTGGA-------------------------CCAATAAGT--GACAATGGGGCTGGT-------------------------------------------------------------------------------------------------------------------------------CCCAACCACGA--AT------TAGCAAAAATCAAG-------------------GCGCTTATTTATAAAAAACTTATTCAGCCAATCCTAGTATACGGCCACATTGGCTGGT-TT---------------------
droEug1 scf7180000409533:585292-585381 + GGA----------------------CG-AG--------GACAAG--------------TTGATGGCAAATCGGCAAATCGG------------------------CCTAATT--------------------------------GCCAGACGC---CATC---ATC---A---------TCA----TCATCATCG----------TCGTCGTCGTCTTGGT-------------------------------------------------------------------------------------------------------------------------------------------------------CG---------------------
dm3 chrX:5946551-5946637 + ATCACCG---CCACCA------------------------------------------------------------------------------------------------------------TCATCGCGTCATCGTGGA-TACC------------CGTCATC---A---------TCG-------TCATCG----------TCATCGTC------ATCAG----------C-----------ATTTGCCAACCATTCCCA-----------------------------------------------------------------------------------------------------------TGA---------------------
droSim2 3l:4295313-4295362 + ACA----------------------TG-GG-------------------------------------------------------------------------------------------------------------------------GGCATC------ATCACCA---------TCA-------TCATCA----------CCATCATC------GTCAG----------C-----------TTTG-------------------------------------------------------------------------------------------------------------------------GAT---------------------
droSec2 scaffold_37:288104-288170 + CGGGA-------------------------------------------------------------------------------------------------------------------------------------------------TAC---C------ATC---G---------TCATCG-TCATCGTCT----------TCTTCATCACCAGAAACAG----------A----------------ATCGTAATTAGAATCA--------------------------------------------------------------------------------------------------------GAA---------------------
droYak3 X:11588524-11588621 - CGT----------------------CG-CC-------------------------------------------------------------------------------------------------------------------------AG------------C---G---------TCGT----C------G----------TCGTCGTC------GTCAG----------T-----------------CAACAACAACAACCGAACAGCTTCACTTATTATA-------------AAAGTATTATT-----------------------------ACTACTATTTCTG-------------GCTGGCTAT---------------------
droEre2 scaffold_4770:10782062-10782125 + TAA----------------------TCATGA----------------------------------------------------------------------------------------------------------------------CCAG---C---AACATC---A---------TCATCAT-C------ATCATCATCAT----CGGC---ATTA---C----------G----------------ATCATCATGGC-------------------------------------------------------------------------------------------------------------AAT---------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
ACAAGCA---TCTCGACCTGGTGCT------GGGCAAGGCCAAGCGACA----GAT-GGCGATAGTGAGTAGATATTTTGG------------------------TTTAATCAGC--AGCAGTAACACCGGGGCAT-----------------------C---ATC---GTCATCGTCGTCG---T-C------G----------TCGTCGTT------ATCGG----------C-----------ACTGGATAATAATAACAATGAGAA--AA------TCACCAAAATACGA-------------------TCACTCATCTACAAGAAGTTGATTCAGCCGCTATTGCTGTACGGCCATGTG-GCCAATTTTCAATTTCTAATTTTCAATTCASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................................................................................................................................................................................................................................................................................AA------TCACCAAAATACGA-------------------TCACTC............................................................................2232.006060000
................................................................................................................................................................................................................................................................................AA------TCACCAAAATACGA-------------------TCACTCA...........................................................................2332.006060000
....................................................................GTAGATATTTTGG------------------------TTTAATCAGC--......................................................................................................................................................................................................................................................................................2321.503120000
................................................................................................................................................................................................................................................................................AA------TCACCAAAATACGA-------------------TCACTCAT..........................................................................2431.334040000
........................T------GGGCAAGGCCAAGCGACA----GAT-GG................................................................................................................................................................................................................................................................................................................................................2421.002020000
................................................................................................................................................................................................................................................................................AA------TCACCAAAATACGA-------------------TCACTCATC.........................................................................2521.002020000
....................................................................................................................................................................................................................................................................................................................................CAAGAAGTTGATTCAGCCGCTATTGC.............................................2620.501010000
..........................................................................................................................TAACACCGGGGCAT-----------------------C---ATC---GTCAA.............................................................................................................................................................................................................................2320.501010000
.............CGACCTGGTGCT------GGGCAAGG....................................................................................................................................................................................................................................................................................................................................................................2020.501001000
..........................................................................................................................TAACACCGGGGCAT-----------------------C---ATC---G.................................................................................................................................................................................................................................1920.501010000
................................................................................................................................................................................................................................................................................AA------TCACCAAAATACGA-------------------TCACTCATCTA.......................................................................2720.501010000
....................................................................GTAGATATTTTGG------------------------TTTAATCAGC--AGC...................................................................................................................................................................................................................................................................................2620.501010000
........................T------GGGCAAGGCCAAGCGACA----GAT-G.................................................................................................................................................................................................................................................................................................................................................2320.501010000
....................................................................................................................................................................................CG---T-C------G----------TCGTCGTT------ATCGG----------C-----------ACTGGA...............................................................................................................................................2520.501010000
.....................................................................................................................................................................................G---T-C------G----------TCGTCGTT------ATCGG----------C-----------ACTGGA...............................................................................................................................................2420.501000001
................................................................................................................................................................................TCGTCG---T-C------G----------TCGTCGTT------ATCGG----------C-----------.....................................................................................................................................................2320.501100000
........................T------GGGCAAGGCCAAGCGACA----GAT-GGC...............................................................................................................................................................................................................................................................................................................................................2520.501010000
................................................................................................................................................................................................................................................................................AA------TCACCAAAATACGA-------------------TCACTCATCTAC......................................................................2820.501010000
...............................GGGCAAGGCCAAGCGACA----GAT-G.................................................................................................................................................................................................................................................................................................................................................2220.501010000
......................................................................................................................................................................................................................................................................................................................................AGAAGTTGATTCAGCCGCTATTG..............................................2320.501010000
........................................................................................................................................................................................................................................................................................................................................................TATTGCTGTACGGCCATGT................................1920.501010000
...............................................................................................................................................................................................................GTCGTT------ATCGG----------C-----------ACTGGATAA............................................................................................................................................2120.501100000
...............................GGGCAAGGCCAAGCGACA----GAT-GGC...............................................................................................................................................................................................................................................................................................................................................2420.501010000
....................................................................GTAGATATTTTGG------------------------TTTAATCAGC--AG....................................................................................................................................................................................................................................................................................2520.501010000
....................................................................GTAGATATTTTGG------------------------TTTAATCAGC--A.....................................................................................................................................................................................................................................................................................2420.501010000
................................................................................................................AGC--AGCAGTAACACCGGGG......................................................................................................................................................................................................................................................................1920.501010000
.................................................................................................................................................................................................................................................................................A------TCACCAAAATACGA-------------------TCACTCATCTA.......................................................................2620.501010000
..................................................................................................................................................................................................................................................................................................................................TACAAGAAGTTGATTCAGCCGC...................................................2220.501010000
.................................GCAAGGCCAAGCGACA----GAT-GGCGATAG..........................................................................................................................................................................................................................................................................................................................................2720.501010000
....................................................................GTAGATATTTTGG------------------------TTTAATCAG.........................................................................................................................................................................................................................................................................................2220.501010000
..........................................................................................................................TAACACCGGGGCAT-----------------------C---ATC---GTCATC............................................................................................................................................................................................................................2420.501010000
................................................................................................................................................................................................................................................................................AA------TCACCAAAATACGA-------------------TCACTCATCT........................................................................2620.501010000
..................................................................................................................................................................................................................................................................................................................................TACAAGAAGTTGATTCAGCCGCT..................................................2320.501010000
................................................................................................................................................................................................................................................................................AA------TCACCAAAATACGA-------------------TCACTA............................................................................2230.331010000
................................................................................................................................................................................................................................................................................AA------TCACCAAAATACGA-------------------TCACT.............................................................................2130.331010000
.....................................................................................................................................CAT-----------------------C---ATC---GTCATCGTCGTCG---T-................................................................................................................................................................................................................2170.141100000
..........................................................................................................................................................................TCATCGTCGTCG---T-C------G----------TCGTC.........................................................................................................................................................................................20200.051001000
dp5
ACAAGCA---TCTCGATCTGGTGCT------GGGCAAAGCCAAGCGACA----AAT--GCGATAGTGAGTAGATATTTTGG------------------------TTTAATCAG------------------------------------------C---AGCAGT---A---------ACATCAT-C------GTCGTCGTCAT----C------------GG----------C-----------ACTGGATAATAATAACAATGAGAA--AA------TCACCAAAATACGA-------------------TCACTCATCTACAAGAAGTTGATTCAGCCGTTGTTGCTGTATGGCCATGTG-GC----------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......................................................................................................................................................................................................................................................CTGGATAATAATAACAATGAGAA--AA------...................................................................................................................2517.0070000000340
.....................................................................................................................................................................................................................................................................................................................................AAGAAGTTGATTCAGCCGTTGTTG..............................................2416.0060600000000
.......................................................................................................................................................................................................................................................CTGGATAATAATAACAATGAGAA--A..........................................................................................................................2415.0050000000140
................................................................................................................................................................................................................................................................................AA------TCACCAAAATACGA-------------------TCACTCATC.........................................................................2515.0050410000000
.....................................................................................................................................................................................................................................................................................................................................AAGAAGTTGATTCAGCCGTTGT................................................2214.0040100010020
..........................................................................................................................................................................................................................................C-----------ACTGGATAATAATAACAATGAGAA--...........................................................................................................................2514.0040000000040
.................................................................TGAGTAGATATTTTGG------------------------TTTAATC...........................................................................................................................................................................................................................................................................................2313.0030300000000
.................................................................TGAGTAGATATTTTGG------------------------TTTAATCAG------------------------------------------C---A..........................................................................................................................................................................................................................................2713.0030100000110
..................................................................GAGTAGATATTTTGG------------------------TTTAATCAG------------------------------------------C---...........................................................................................................................................................................................................................................2513.0030300000000
.......................................................................................................................................................................................................................................................CTGGATAATAATAACAATGAGA..............................................................................................................................2213.0030000000030
..................................................................................................................................................................................................................................................................................................ACGA-------------------TCACTCATCTACAAGAAGTTGA............................................................2612.0020200000000
.................................................................................................................................................................GCAGT---A---------ACATCAT-C------GTCGTC...................................................................................................................................................................................................2012.0020000000020
...................................................................................................................................................................................................................................................................................................CGA-------------------TCACTCATCTACAAGAAGTTG.............................................................2412.0020200000000
.....................................................................................................................................................................T---A---------ACATCAT-C------GTCGTCGTCAT----C------------G............................................................................................................................................................................2312.0020100000100
.....................................................................................................................................................................T---A---------ACATCAT-C------GTCGTCGTCAT----C------------.............................................................................................................................................................................2212.0020000000110
...................................................................................................................................................................AGT---A---------ACATCAT-C------GTCGTCGTCAT----..........................................................................................................................................................................................2312.0020000000020
...........CTCGATCTGGTGCT------GGGCAAAGC...................................................................................................................................................................................................................................................................................................................................................................2312.0020000000020
..................................................................GAGTAGATATTTTGG------------------------TTTAATCA..........................................................................................................................................................................................................................................................................................2312.0020200000000
................................................................................................................AG------------------------------------------C---AGCAGT---A---------ACATCAT-C------GTCGTCG..................................................................................................................................................................................................2512.0020000000020
...............................................................................................................................................................................................................................G----------C-----------ACTGGATAATAATAACAATGA................................................................................................................................2312.0020000000020
................................................................................................................................................................AGCAGT---A---------ACATCAT-C------GTCGT....................................................................................................................................................................................................2012.0020000000020
....................................................................................................................................................................................CATCAT-C------GTCGTCGTCAT----C------------GG----------.................................................................................................................................................................2112.0020100000010
.................................................................................................................................................................................................................C------------GG----------C-----------ACTGGATAATAATAACAAT..................................................................................................................................2311.0010000000010
..........................................................................................................................................................................................................................................C-----------ACTGGATAATAATAACAATGAG...............................................................................................................................2311.0010000000010
...............ATCTGGTGCT------GGGCAAAGCCAAGCGT............................................................................................................................................................................................................................................................................................................................................................2611.0010000001000
.....................................................................................................................................................................T---A---------ACATCAT-C------GTCGTCGTCAT----C------------GG----------C-----------ACG..................................................................................................................................................2811.0010000000100
..................................................................................................................................................................................................................................................................................................................................TACAAGAAGTTGATTCAGCCGTTGT................................................2511.0010100000000
.......................................................................................................................................................................................................................................................................................................................................GAAGTTGATTCAGCCGTTGTTGC.............................................2311.0010100000000
.......................................................................................................................................................................................................................................................CTGGATAATAATAACAATGAGAA--AA------TC.................................................................................................................2711.0010000000100
..................................................................................................................................................................CAGT---A---------ACATCAT-C------GTCGTCGTCAT----C------------GG----------.................................................................................................................................................................2711.0010000000010
...............................................................................................................................................................................................................................G----------C-----------ACTGGATAATAATAACAATG.................................................................................................................................2211.0010000000010
...................................................................................................................................................................AGT---A---------ACATCAT-C------GTCGTCGTCAT----C------------G............................................................................................................................................................................2511.0010000000010
......................................................................................................................................................................................................................................................................................................................................AGAAGTTGATTCAGCCGTTGTTGC.............................................2411.0010100000000
................................................................................................................................................................................................................................................................................................................................................TCAGCCGTTGTTGCTGTATGGCCC...................................2411.0010100000000
................................................................................................................................................................................................................................................................................AA------TCACCAAAATACGA-------------------TCACTC............................................................................2211.0010000000010
.......................................................................................................................................................................................................................................................CTGGATAATAATAACAATGAGAA--...........................................................................................................................2311.0010000000010
................................................................................................................................................................AGCAGT---A---------ACATCAT-C------GTCGTCG..................................................................................................................................................................................................2211.0010000000010
.....................................................................................................................................................................................................................................................................CAATGAGAA--AA------TCACCAAAATACGA-------------------..................................................................................2511.0010100000000
....................................................................GTAGATATTTTGG------------------------TTTAATCAG------------------------------------------...............................................................................................................................................................................................................................................2211.0010000000010
................................................................................................................................................................................................................................................................................................................................................TCAGCCGTTGTTGCTGTATGGC.....................................2211.0010100000000
................TCTGGTGCT------GGGCAAAGCCA.................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................TTGCTGTATGGCCATGTG-GC----------------------------2011.0010100000000
.................................................................................................................................................................................................................................................................................................................................................CAGCCGTTGTTGCTGTATGGCCATGTG-..............................2711.0010100000000
..........................................................GCGATAGTGAGTAGATATTTTGG------------------------..................................................................................................................................................................................................................................................................................................2311.0010000000010
............................................................................................................................................................................................................................................................................................................................................TGATTCAGCCGTTGTTGCTGTATGGCC....................................2711.0010100000000
..................................................................GAGTAGATATTTTGG------------------------TTTAATCAG------------------------------------------C---A..........................................................................................................................................................................................................................................2611.0010000000100
................................................................................................................AG------------------------------------------C---AGCAGT---A---------ACATCAT-C------GTCGT....................................................................................................................................................................................................2311.0010000001000
.....................................................................................................................................................................T---A---------ACATCAT-C------GTCGTCGTCAT----C------------GG----------A-----------.....................................................................................................................................................2511.0010000000010
.......................................................................................................................................................................................................................................................CTGGATAATAATAACAATGAGAA--AA------T..................................................................................................................2611.0010000000010
..........................................................................................................................................................................................................................................C-----------ACTGGATAATAATAACAATGAGA..............................................................................................................................2411.0010100000000
................................................................................................................................................................................................................................................................................................................................TCTACAAGAAGTTGATTCAGCCGTTGT................................................2711.0010100000000
.................................................................TGAGTAGATATTTTGG------------------------TTTAATCAG------------------------------------------C---AGC........................................................................................................................................................................................................................................2911.0010000001000
...............................................................................................................................................................................................................................................................................................AATACGA-------------------TCACTCATCTACAAGAA.................................................................2411.0010100000000
.............................................................................................................................................................................................................................................................................................................................TCATCTACAAGAAGTTGATTCAGCCGT...................................................2711.0010100000000
..................................................................GAGTAGATATTTTGG------------------------TTTA..............................................................................................................................................................................................................................................................................................1911.0010100000000
....................................................................GTAGATATTTTGG------------------------TTTAATCAG------------------------------------------C---...........................................................................................................................................................................................................................................2311.0010000000010
...................................................................................................................................................................AGT---A---------ACATCAT-C------GTCGTCG..................................................................................................................................................................................................1911.0010000000010
.....................................................................................................................................................................T---A---------ACATCAT-C------GTCGTCGTCAT----C------------GG----------C-----------AC...................................................................................................................................................2711.0010000000100
.....................................................................................................................................................................................................................................................................................................................................AAGAAGTTGATTCAGCCGTTG.................................................2111.0010000000010
.........................................................................................................................................................................................................TCAT----C------------GG----------C-----------ACTGGATAATAATAACAA...................................................................................................................................2611.0010000000100
...................................................................AGTAGATATTTTGG------------------------TTTAATCAG------------------------------------------C---...........................................................................................................................................................................................................................................2411.0010000000010
.....................................................................................................................................................................T---A---------ACATCAT-C------GTCGTCGTCAT----C------------GG----------.................................................................................................................................................................2411.0010000000010
..................................................................................................................................................................................................................................................................................................................................TACAAGAAGTTGATTCAGCCGT...................................................2211.0010100000000
.......................................................T--GCGATAGTGAGTAGATATTTTGG------------------------TT................................................................................................................................................................................................................................................................................................2611.0010100000000
.................................................................TGAGTAGATATTTTGG------------------------TTTA..............................................................................................................................................................................................................................................................................................2011.0010000001000
.........................................................................................................................................................................A---------ACATCAT-C------GTCGTCGTCA...............................................................................................................................................................................................1911.0010100000000
.....CA---TCTCGATCTGGTGCT------GG..........................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
...................................................................................................................................................................................................................................................................................................CGA-------------------TCACTCATCTACAAGAAGTTGA............................................................2511.0010100000000
..................................................................................................................................................................CAGT---A---------ACATCAT-C------GTCGTCGTCAT----A------------.............................................................................................................................................................................2511.0010000000100
.....CA---TCTCGATCTGGTGCT------GGGCAAA.....................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
.....................................................................................................................................................................................................................................................................................................................................AAGAAGTTGATTCAGCCGTTGTT...............................................2311.0010000001000
...........................................................................TTTTGG------------------------TTTAATCAG------------------------------------------C---AGCAGT---A---------ACAT....................................................................................................................................................................................................................2711.0010000000010
.....................................................................................................................................................................................................................................................................................................................................AAGAAGTTGATTCAGCCGTTGTTGC.............................................2511.0010100000000
droWil2
AAAGTCA---CATAGAGCAAAGCCT------AAAAATGGCAAAATGTCC----AATTAGCAAAATCTACCAGATATTCAGGCCACGAGTTAAATCAC--------ATTAATCAAA--CGCAAACATTGCGAA-----------------------------ATC---------------TCC-------TCATCT----------CATTACTCGTCCG-AGAGT----------GACTATTTAGAAAGTAAAAAAATATTACAAGAAGAA--CA------TGAC---------------------------------------------------------------------------------------CAA---------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................................................................................................................................A-----------------------------ATC---------------TCC-------TCATCT----------CATTACTCGT....................................................................................................................................................................................2321.50303000
.....................................................................CAGATATTCAGGCCACGAGTTAAAT.............................................................................................................................................................................................................................................................................................................2511.00100010
......A---CATAGAGCAAAGCCT------AAAAATGGCAAT................................................................................................................................................................................................................................................................................................................................................................2811.00101000
............TAGAGCAAAGCCT------AAAAATGGCAAAATG.............................................................................................................................................................................................................................................................................................................................................................2811.00100010
.................................................................CTACCAGATATTCAGGCCACGAGT..................................................................................................................................................................................................................................................................................................................2411.00100010
.....................................................................CAGATATTCAGGCCACGAGTTAAA..............................................................................................................................................................................................................................................................................................................2411.00101000
...............................................................................................................................................................................................ATCT----------CATTACTCGTCCG-AGAGT----------.................................................................................................................................................................2220.50101000
..............................................................................................................................................................................................CATCT----------CATTACTCGTCCG-AGAGT----------.................................................................................................................................................................2320.50101000
.................................................................................................................................................................ATC---------------TCC-------TCATCT----------CATTACTCGTCCG-A...............................................................................................................................................................................2620.50101000
..............................................................................................................................................................................................CATCT----------CATTACTCGTCCG-AGA.............................................................................................................................................................................2120.50101000
...................................................................................................................................................................................TCC-------TCATCT----------CATTACTCGTCCG-AGAG............................................................................................................................................................................2620.50101000
..............................................................................................................................................................................................CATCT----------CATTACTCGTCCG-AGAG............................................................................................................................................................................2220.50101000
...............................................................................................................................................................................................ATCT----------CATTACTCGTCCG-AGAG............................................................................................................................................................................2120.50101000
..............................................................................................................................TGCGAA-----------------------------ATC---------------TCC-------TCATCT----------CATTACTCGTC...................................................................................................................................................................................2920.50100010
..........................................................GCAAAATCTACCAGATATTCAGGCC........................................................................................................................................................................................................................................................................................................................2550.40202000
..........................................................................................................................ACATTGCGAA-----------------------------ATC---------------TCC-------TCATCT----------C.............................................................................................................................................................................................2340.25101000
..........................................................GCAAAATCTACCAGATATTCAGGC.........................................................................................................................................................................................................................................................................................................................2450.20101000
..........................................................GCAAAATCTACCAGATATTCAG...........................................................................................................................................................................................................................................................................................................................2250.20101000
.............................................................................................................................................................................................................................................................AAATATTACAAGAAGAA--CA------TGAC---------------------------------------------------------------------------------------C.......................2450.20101000
..........................................................GCAAAATCTACCAGATATTCAGGCCAC......................................................................................................................................................................................................................................................................................................................2750.20101000
........................................................TAGCAAAATCTACCAGATATTCAGGC.........................................................................................................................................................................................................................................................................................................................2650.20101000
.......................................................................................................................................................................................................................CCG-AGAGT----------GACTATTTAGAAAGTAA................................................................................................................................................2550.20101000
..................................................................................................................................................................................................................................................................TTACAAGAAGAA--CA------TGAC---------------------------------------------------------------------------------------CAA---------------------2150.20100010
...........................................................CAAAATCTACCAGATATTCAGGCCAC......................................................................................................................................................................................................................................................................................................................2650.20101000
...................................................................................................................................................................................................................TCGTCCG-AGAGT----------GACTATTTAGAAAG...................................................................................................................................................2650.20101000
droVir3
TCAG----------------------CGGCG----------------------------------------------------------------------------------------------------------------------GCGG---CGAC---GTT---G---------TCG----TTGTCGTCG----------TCGTCGTCGTCAATGT-------------C-----------ACACAACAACAATAACAATAATAA--TA------ACAACA-------------AAAGCCAAAACACAACTCTCAACAACAAC--------------------------------------------AA---------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............................................................................................................................................................GAC---GTT---G---------TCG----TTGTCGTCG----------TC............................................................................................................................................................................................2111.001000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................CG----TTGTCGTCG----------TCGTCGTCG.....................................................................................................................................................................................20200.204000000000000000000000000000000000000000000000000000000000000004
droMoj3
ACGAGCA---CCTCCT--TGGTGCG------GGGCGG-------CGGCCGGTATGT-GGGGCTG----TTCAGCGAGTTTG-----------G----CACTTCTGCGCAGGCGGCATGGCGGCAACGGAACGGAACCGGATG-TGCG------------CGTCGGC---G---------T-------CGGCGTCG----------TCGTCGTCGTTAGCGTTGG----------C-----------GTT---------------------------------------------------------------------------------------------------------------------------GG---------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
CAT----------------------CG-TC-------------------------------------------------------------------------------------------------------------------------AGCATC------GTT---T---------GCA---T-C------GTCGTCGCTGT----CGCC---GCTGGCCGCAATGGCGGCA-----------A-----TGCCAACAACAATGCCAA--CG------CTGCCCGCCAGCGTTGATGAAG-----------------------------------CTGCCGCCGCTGCTGCGCTG----GCG-GCCAACATT---------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
TCAGTCACAG---------------TCACAG----------------------------------------------------------------------------------------------------------------------CCGC---TGCC---GCC---G---------TCG----TCGTCGTCG----------TCGTCGTCGCCATAACCGG----------C-----------GCT----------------------------------------------------------------------------------------------------------------------------G---------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
ATCATCATCA---------------TCAGCA----------------------------------------------------------------------------------------------------------------------TCAA---CCTC---ATC---A---------TCG----TCGTCGTCG----------TCGACGTCGTCTTCGTCAG----------A-----------------GATCAGAGACAAGAGGAG--A---------------------------------------------------------------------------------------------------AT---------------------SizeHit CountTotal NormTotal
No Reads
droKik1
AAG----------------------CG-CC-GGA------------------------GTAATTGTGAGTTAAAACTTTG-----------------CG--------------GAAAAACAACAACAATACAGCAG----------CC-GGAG---CAGCAGCATC---G---------TTATCAT-C------ATCATCATCAT----C------------GG----------C-----------ATCG---------------------------------------------------------------------------------------------------------------------------G---------------------SizeHit CountTotal NormTotal
No Reads
droFic1
CAG----------------------CA-GC------------------------------------------------------------------------------------------AACAGCAGCAGGGAGT-----------------------C---ACT---GTCTCCGGCGGCG---G-C------A----------CCTTGCCC------ACAGT----------T-----------GCTGGCCAGCAGCAACAGCAGCAG--CA------TCAGCA-------------------------------------------------------------------------------------GAA---------------------SizeHit CountTotal NormTotal
No Reads
droEle1
AGT----------------------TG-AC--------------------------------------------ACTTTG-----------------CA-TCTTGTGCAATCACC----------------------AAATATTGTCGGAGAA---TGTCAACGTC---G---------TCG-------TCGCCG----------TCGCCGTCGTC------AG----------C-----------ATCA------------------------------ACTTTG-------------------------------------------------------------------------------------TAT---------------------SizeHit CountTotal NormTotal
No Reads
droRho1
CAA----------------------CA-GC------------------------------------------------------------------------------------------AACAACAATGCAGCAG-----------------------C---AGC---GCTGCCGACGTCG---T-C------G----------TTGTTGTT------GTGCG----------T-----------TGTG-------------------------------------------------------------------------------------------------------------------TATAAAAAT---------------------SizeHit CountTotal NormTotal
No Reads
droBia1
GGCAG----------------------------------------------------------------------------------------------------------------------------------------------------------CAACATC---G---------TCGT----CGCCGTCG----------TCGTCGTC------GTCAG----------C-----------A-----AATCAAAATCCAAACCAA--AA------TCACTTGAAAAC--------------------------------------------------------------------------------GA---------------------SizeHit CountTotal NormTotal
No Reads
droTak1
AAAATCA---CATTATGAATACCCT------TAAGAAGGCTAAACTACA----ATTCAACAAAATACACCAGATATTTGGA-------------------------CCAATAAGT--GACAATGGGGCTGGT-------------------------------------------------------------------------------------------------------------------------------CCCAACCACGA--AT------TAGCAAAAATCAAG-------------------GCGCTTATTTATAAAAAACTTATTCAGCCAATCCTAGTATACGGCCACATTGGCTGGT-TT---------------------SizeHit CountTotal NormTotal
No Reads
droEug1
GGA----------------------CG-AG--------GACAAG--------------TTGATGGCAAATCGGCAAATCGG------------------------CCTAATT--------------------------------GCCAGACGC---CATC---ATC---A---------TCA----TCATCATCG----------TCGTCGTCGTCTTGGT-------------------------------------------------------------------------------------------------------------------------------------------------------CG---------------------SizeHit CountTotal NormTotal
No Reads
dm3
ATCACCG---CCACCA------------------------------------------------------------------------------------------------------------TCATCGCGTCATCGTGGA-TACC------------CGTCATC---A---------TCG-------TCATCG----------TCATCGTC------ATCAG----------C-----------ATTTGCCAACCATTCCCA-----------------------------------------------------------------------------------------------------------TGA---------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
........................................................................................................................................CGTGGA-TACC------------CGTCATC---A---------TCG-------TCATC.........................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........CACCA------------------------------------------------------------------------------------------------------------TCATCGCGTCATCGTGGA-T...........................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................ATC---A---------TCG-------TCATCG----------TCATCGTT------................................................................................................................................................................................21120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..................................................................................................................................................................CATC---A---------TCG-------TCATCG----------TCATC.........................................................................................................................................................................................19160.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................A---------TCG-------TCATCG----------TCATCGTC------................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
droSim2
ACA----------------------TG-GG-------------------------------------------------------------------------------------------------------------------------GGCATC------ATCACCA---------TCA-------TCATCA----------CCATCATC------GTCAG----------C-----------TTTG-------------------------------------------------------------------------------------------------------------------------GAT---------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................................................................................................................................................................CA---------TCA-------TCATCA----------CCATCAT.......................................................................................................................................................................................18200.05100000000001000000
...........................................................................................................................................................TC------ATCACCA---------TCA-------TCATC.........................................................................................................................................................................................................17200.05100000000001000000
droSec2
CGGGA-------------------------------------------------------------------------------------------------------------------------------------------------TAC---C------ATC---G---------TCATCG-TCATCGTCT----------TCTTCATCACCAGAAACAG----------A----------------ATCGTAATTAGAATCA--------------------------------------------------------------------------------------------------------GAA---------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................................................................................................................................................................ATC---G---------TCATCG-TCATCGTCT----------TC............................................................................................................................................................................................2111.0010100
.....................................................................................................................................................................C---G---------TCATCG-TCATCGTCT----------TCTT..........................................................................................................................................................................................2111.0011000
droYak3
CGT----------------------CG-CC-------------------------------------------------------------------------------------------------------------------------AG------------C---G---------TCGT----C------G----------TCGTCGTC------GTCAG----------T-----------------CAACAACAACAACCGAACAGCTTCACTTATTATA-------------AAAGTATTATT-----------------------------ACTACTATTTCTG-------------GCTGGCTAT---------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
TAA----------------------TCATGA----------------------------------------------------------------------------------------------------------------------CCAG---C---AACATC---A---------TCATCAT-C------ATCATCATCAT----CGGC---ATTA---C----------G----------------ATCATCATGGC-------------------------------------------------------------------------------------------------------------AAT---------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 06/08/2015 at 03:09 PM