ID:

dpe_694

 Coordinate:

scaffold_113:66284-66434 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-21.0 -21.0 -20.9

Flybase annnotation

CDS [Dper\GL21431-cds]; exon [dper_GLEANR_3455:2]; intron [Dper\GL21431-in]

Repeatable elements

NameClassFamilyStrand
Gypsy16-I_Dpse-intLTRGypsy+
mature
  1. scaffold_64:201861-201886 -
  2. dpe_694  scaffold_113:66409-66434 -
  3. scaffold_113:73739-73764 -
  4. scaffold_113:74378-74403 -
  5. scaffold_538:8199-8224 -
star
  1. scaffold_64:201764-201790 -
  2. dpe_694  scaffold_113:66314-66340 -
  3. scaffold_113:73644-73670 -

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AAAGTCTATTCGCCTGTACCTATTGCATTCCTAAGCTGAGCTTTAAGCTTTAACATAACTGTGCAATCGGATGATCTTCTGGATCTCCTGCATTCCACCAATTTCTATGCTATGCTAGCGAGGGCGGTATGAAAAGTATCTTTCTAGAAAGTGTACCTAACTTGTTCGACCTTTTCCTTTTTTCTTTTGATTTTCGAATAGTTGGACACTACACACTCCAAACGCCGAGAGGTCAGGAGACTGAGGCGAAG
**************************************************..........(((((...(((.(((((...)))))))))))))........((((.(((((..(((......)))))))))))).((((((((....)))).))))...............******************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 M021
embryo
 V042
embryo
 V111
male body		 V057
head
..................................................TAACATAACTGTGCAATCGGATGATC............................................................................................................................................................................... 26 0 5 3.00 15 14 0 1 0 0
.......................TGCATTCCTAAGCTGAGCTTTAAGC........................................................................................................................................................................................................... 25 0 4 2.75 11 10 0 1 0 0
...............................................................................................................................................................................................TTTCGAATAGTTGGACACTACACAC................................... 25 0 2 2.50 5 5 0 0 0 0
................................................................................................................................................TAGAAAGTGTACCTAACTTGTTCGACC................................................................................ 27 0 3 2.00 6 6 0 0 0 0
...............................................................................................................................................................................................TTTCGAATAGTTGGACACTACACACT.................................. 26 0 1 2.00 2 2 0 0 0 0
..................................................TAACATAACTGTGCAATCGGATGAT................................................................................................................................................................................ 25 0 5 1.80 9 4 5 0 0 0
......................................................................................................................................................................................TCTTTTGATTTTCGAATAGTTGGACAC.......................................... 27 0 4 1.75 7 7 0 0 0 0
..................................................TAACATAACTGTGCAATCGGATGATCT.............................................................................................................................................................................. 27 0 5 1.60 8 7 0 0 1 0
.................................................................................................................................TGAAAAGTATCTTTCTAGAAAGTG.................................................................................................. 24 0 3 1.33 4 4 0 0 0 0
................................................................................................................................................................................................TTCGAATAGTTGGACACTACACACTCC................................ 27 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................................................................................TTTTCGAATAGTTGGACACTACACACT.................................. 27 0 1 1.00 1 1 0 0 0 0
...............................................................................................................................................................................................TTTCGAATGGTTGGACACTACACACT.................................. 26 1 1 1.00 1 1 0 0 0 0
......................................................................................................................................................................................TCTTTTGATTTTCGAATAGTTGGACA........................................... 26 0 4 1.00 4 4 0 0 0 0
................................................................................................................................................................................................TTCGAATAGTTGGACACTACACAC................................... 24 0 2 0.50 1 1 0 0 0 0
.......................................................................................................................................................................................CTTTTGATTTTCGAATAGTTGGAC............................................ 24 0 4 0.50 2 2 0 0 0 0
...........................................................................................................................................................................................TGATTTTCGAATAGTTGGACACTACACAC................................... 29 0 2 0.50 1 1 0 0 0 0
...........................................................................................................................................................................................TGATTTTCGAATAGTTGGACACTA........................................ 24 0 4 0.50 2 0 2 0 0 0
..................................................TAACATAACTGTGCAATCGGATGA................................................................................................................................................................................. 24 0 5 0.40 2 0 2 0 0 0
...................................................AACATAACTGTGCAATCGGATGATCT.............................................................................................................................................................................. 26 0 5 0.40 2 2 0 0 0 0
..................................................TAACATAACTGTGCAATCGGATG.................................................................................................................................................................................. 23 0 5 0.40 2 2 0 0 0 0
.......................................................TAACTGTGCAATCGGATGATCTTCT........................................................................................................................................................................... 25 0 5 0.40 2 2 0 0 0 0
...................................................................................TCTCCTGCGTTCCACCAATTTCTATGC............................................................................................................................................. 27 1 3 0.33 1 1 0 0 0 0
.............................................................................................TCCACCAATTTCTATGCTATGCTAGCGA.................................................................................................................................. 28 0 3 0.33 1 1 0 0 0 0
......................................................................................................TTCTATGCGATGCTAGCGAGGGCGG............................................................................................................................ 25 1 3 0.33 1 1 0 0 0 0
.......................................................................................................TCTATGCTATGCTAGCGAGGGC.............................................................................................................................. 22 0 3 0.33 1 0 0 1 0 0
.........................................................................................................................................ATCTTTCTAGAAAGTGTACCTAACTTG....................................................................................... 27 0 3 0.33 1 1 0 0 0 0
..............................................................................................................................................................................................TTTTCGAATAGTTGGACACTACACA.................................... 25 0 3 0.33 1 1 0 0 0 0
................................................................................................................................................TAGAAAGTGTACCTAACTTGTTCGACCTT.............................................................................. 29 0 3 0.33 1 1 0 0 0 0
................................................................................................................................................TAGAAAGTGTACCTAACTTGTTCGACCT............................................................................... 28 0 3 0.33 1 1 0 0 0 0
........................................................................................................................................TATCTTTCTAGAAAGTGTACCTAACT......................................................................................... 26 0 3 0.33 1 1 0 0 0 0
...................................................................................................................................................AAAGTGTACCTAACTTGTTCGACCTT.............................................................................. 26 0 3 0.33 1 1 0 0 0 0
...........................................................................................................TGCTATGCGAGCGAGGGCGGTATGAA...................................................................................................................... 26 1 3 0.33 1 1 0 0 0 0
...........................................................................................................................................................................TTTTCCTTTTTTCTTTTGATTTTAGAA..................................................... 27 1 3 0.33 1 1 0 0 0 0
................................................................................................................................................AAGAAAGTGTACCTAACTTGTTCGACC................................................................................ 27 1 3 0.33 1 1 0 0 0 0
......................................................................................................TTCTATGCTATGCTAGCGAGGGCG............................................................................................................................. 24 0 3 0.33 1 1 0 0 0 0
.....................................................................................................................................................................TCGACCTTTTCCTTTTTTCTTTTGATT........................................................... 27 0 3 0.33 1 1 0 0 0 0
..................................................................................................................................................................TGTTCGACCTTTTCCTTTTTTCTTT................................................................ 25 0 3 0.33 1 1 0 0 0 0
.....................................................................................TCCTGCATTCCACCAATTTCTATGC............................................................................................................................................. 25 0 3 0.33 1 1 0 0 0 0
.....................................................................................................................................................................................GTCTTTTGATTTTCGAATAGTTGGAC............................................ 26 1 4 0.25 1 1 0 0 0 0
.......................TGCATTCCTAAGCTGAGCTTTAAGCT.......................................................................................................................................................................................................... 26 0 4 0.25 1 1 0 0 0 0
....................TATTGCATTCCTAAGCTGAGCT................................................................................................................................................................................................................. 22 0 4 0.25 1 1 0 0 0 0
.......................TGCATTCCGAAGCTGAGCTTTAA............................................................................................................................................................................................................. 23 1 4 0.25 1 1 0 0 0 0
.............................................................................................................................................................TAACTTGTTCGACCTTTTCCTTTT...................................................................... 24 0 4 0.25 1 1 0 0 0 0
.........................................................................................................................................................TACCTAACTTGTTCGACCTTTTCCTT........................................................................ 26 0 4 0.25 1 1 0 0 0 0
.........................................................................................................................................................TACCTAACTTGTTCGACCTTTTCC.......................................................................... 24 0 4 0.25 1 1 0 0 0 0
......TATTCGCCTGTACCTATTGCATTC............................................................................................................................................................................................................................. 24 0 4 0.25 1 1 0 0 0 0
.........................................................................................................................................................TACCTAACTTGTTCGACCTTTTCCT......................................................................... 25 0 4 0.25 1 1 0 0 0 0
........................GCATTCCTAAGCTGAGCTTTAAG............................................................................................................................................................................................................ 23 0 4 0.25 1 1 0 0 0 0
..............................CTAAGCTGAGCTTTAAGCTTT........................................................................................................................................................................................................ 21 0 4 0.25 1 1 0 0 0 0
.......................TGCATTCCTAAGCTGAGCTTTAAG............................................................................................................................................................................................................ 24 0 4 0.25 1 1 0 0 0 0
................................................................................................................................................................................................TTCGAATAGTTGGACACTAC....................................... 20 0 4 0.25 1 0 1 0 0 0
...........................................................................................................................................................................................TGATTTTCGAATAGTTGGACACT......................................... 23 0 4 0.25 1 0 1 0 0 0
....................TATTGCATGCCTAAGCTGAGCT................................................................................................................................................................................................................. 22 1 4 0.25 1 1 0 0 0 0
..................................................................TCGGATGATCTTCTGGATCTC.................................................................................................................................................................... 21 0 9 0.22 2 1 1 0 0 0
............................................................................TTCTGGATCTCCTGCATTCCACCAAT..................................................................................................................................................... 26 0 9 0.22 2 2 0 0 0 0
..................................................TAACATAAATGTGCAATCGGATGA................................................................................................................................................................................. 24 1 5 0.20 1 1 0 0 0 0
...................................................AACATAACTGTGCAATCGGATG.................................................................................................................................................................................. 22 0 5 0.20 1 1 0 0 0 0
.............................................................TGCAATCGGATGATCTTCTGGATC...................................................................................................................................................................... 24 0 5 0.20 1 1 0 0 0 0
......................................................ATAACTGTGCAATCGGATGATCTTCTG.......................................................................................................................................................................... 27 0 5 0.20 1 1 0 0 0 0
.................................................TTAACATAACTGTGCAATCGGATGATCT.............................................................................................................................................................................. 28 0 5 0.20 1 0 1 0 0 0
..................................................TAACATAACTGTGCAATCGGATGATCTTC............................................................................................................................................................................ 29 0 5 0.20 1 1 0 0 0 0
...................................................AACATAACTGTGCAATCGGATGATC............................................................................................................................................................................... 25 0 5 0.20 1 1 0 0 0 0
.................................................TTAACATAACTGTGCAATCGGATG.................................................................................................................................................................................. 24 0 5 0.20 1 1 0 0 0 0
.......................................................................................................................................................................................CTTTTGATTTTCGAATAGTTGGA............................................. 23 0 8 0.13 1 1 0 0 0 0
......................................................................................................................................................................................TCTTTTGATTTTCGAATAGTTGG.............................................. 23 0 8 0.13 1 1 0 0 0 0
............................................................................TTCTGGATCTCCTGCATTCCACCAATT.................................................................................................................................................... 27 0 9 0.11 1 1 0 0 0 0
......................................................................ATGATCTTCTGGATCTCCTGCATT............................................................................................................................................................. 24 0 9 0.11 1 1 0 0 0 0
........................................................................GATCTTCTGGATCTCCTGCATTCCA.......................................................................................................................................................... 25 0 9 0.11 1 1 0 0 0 0
.............................................................................TCTGGATCTCCTGCATTCCACCAATTT................................................................................................................................................... 27 0 9 0.11 1 1 0 0 0 0
......................................................................ATGATCTTCTGGATCTCCTGCATTCC........................................................................................................................................................... 26 0 9 0.11 1 1 0 0 0 0
......................................................................ATGATCTTCTGGATCTCCTGCAT.............................................................................................................................................................. 23 0 9 0.11 1 1 0 0 0 0
..............................................................................................................TATGCTAGCGAGGGCGGTAT......................................................................................................................... 20 0 9 0.11 1 1 0 0 0 0
........................................................................................................................................................................................................................................TCAGGAGACTGAGGCGAA. 18 0 20 0.10 2 2 0 0 0 0
................................................................................................................................................................................................TTCGGATAGTCGGACACT......................................... 18 2 10 0.10 1 0 1 0 0 0
......................................................................................................................................................GTGCACCTCGCTTGTTCGAC................................................................................. 20 3 18 0.06 1 0 0 1 0 0
........................................................................................................................................................................................................................................TCAGGAGACTGAGGCGAAG 19 0 20 0.05 1 1 0 0 0 0
..AGTCTCTTCGCGTGTACCA...................................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 1
..............................................................................................................................................................................................................................CGCCGAGAGGTCAGGAGACT......... 20 0 20 0.05 1 0 0 0 1 0

Anti-sense strand reads

TTTCAGATAAGCGGACATGGATAACGTAAGGATTCGACTCGAAATTCGAAATTGTATTGACACGTTAGCCTACTAGAAGACCTAGAGGACGTAAGGTGGTTAAAGATACGATACGATCGCTCCCGCCATACTTTTCATAGAAAGATCTTTCACATGGATTGAACAAGCTGGAAAAGGAAAAAAGAAAACTAAAAGCTTATCAACCTGTGATGTGTGAGGTTTGCGGCTCTCCAGTCCTCTGACTCCGCTTC
********************************************************************************..........(((((...(((.(((((...)))))))))))))........((((.(((((..(((......)))))))))))).((((((((....)))).))))...............************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 V042
embryo
 M021
embryo
.............................................................................................................................................................................................................................TGCGGCTCTCCAGTCCTCTGACT....... 23 0 20 0.50 10 9 1 0
.........................................................................................................................................................................GGAAAAGGAAAAAAGAAAACTAA........................................................... 23 0 3 0.33 1 1 0 0
..........................................................................................................................................................................................................................GTTTGCGGCTCTCCAGTCCTCTGAC........ 25 0 20 0.30 6 6 0 0
............................................................................................................................................................................................................................TTGCGGCTCTCCAGTCCTCTGACT....... 24 0 20 0.25 5 5 0 0
..........................................................................................................................................................................................................................GTTTGCGGCTCTCCAGTCCTCTGACT....... 26 0 20 0.25 5 5 0 0
..........................................................................................................................................................................................................................GTTTGCGGCTCTCCAGTCCTCT........... 22 0 20 0.20 4 4 0 0
.......TAAGCGGACATGGATAACGTAAGGAT.......................................................................................................................................................................................................................... 26 0 5 0.20 1 1 0 0
.........................................................................................................................................................................................................................GGTTTGCGGCTCTCCAGTCCT............. 21 0 20 0.15 3 2 0 1
.......................................................................................................................................................................................................................................CAGTCCTCTGACTCCGCTTC 20 0 20 0.15 3 0 0 3
..............................................................................................................................................................................................................................GCGGCTCTCCAGTCCTCTGAC........ 21 0 20 0.15 3 1 0 2
...............................................................................................................................................................................................................................CGGCTCTCCAGTCCTCTGACT....... 21 0 20 0.15 3 2 1 0
.................................................................................................................................................................................................................................GCTCTCCAGTCCTCTGACT....... 19 0 20 0.15 3 3 0 0
......................................................................................................................GCTCCCGCCATACTTTTCAT................................................................................................................. 20 0 8 0.13 1 0 1 0
..........................................................................................................................................................................................................................GTTTGCGGCTCTCCAGTCCTCTGA......... 24 0 20 0.10 2 2 0 0
..............................................................................................................................................................................................................................GCGGCTCTCCAGTCCTCTGACT....... 22 0 20 0.10 2 2 0 0
...............................................................................................................................................................................................................................CGGCTCTCCAGTCCTCTGACTCCG.... 24 0 20 0.10 2 2 0 0
.........................................................................................................................................................................................................................GGTTTGCGGCTCTCCAGTCCTCT........... 23 0 20 0.10 2 2 0 0
................................................................................................................................................................................................................................GGCTCTCCAGTCCTCTGACTCCGCT.. 25 0 20 0.10 2 2 0 0
...........................................................................................................................................................................................................................TTTGCGGCTCTCCAGTCCTCTGACT....... 25 0 20 0.10 2 0 2 0
...........................................................................................................................................................................................................................TTTGCGGCTCTCCAGTCCTCTGAC........ 24 0 20 0.10 2 2 0 0
....................................................................................................................................................................................................................................CTCCAGTCCTCTGACTCCGCT.. 21 0 20 0.10 2 2 0 0
.................................................................................................................................................................................................................................GCTCTCCAGTCCTCTGACTCCGCT.. 24 0 20 0.10 2 2 0 0
................................................................................................................................................................................................................................GGCTCTCCAGTCCTCTGACTCCGCTT. 26 0 20 0.10 2 2 0 0
..........................................................................................................................................................................................................................GTTTGCGGCTCTCCAGCCCTCTGAC........ 25 1 20 0.05 1 1 0 0
................................................................................................................................................................................................................................GGCTCTCCAGTCCTCTGAC........ 19 0 20 0.05 1 1 0 0
................................................................................................................................................................................................................................GGCTCTCCAGTACTCTGACT....... 20 1 20 0.05 1 1 0 0
........................................................................................................................................................................................................................AGGTTTGCGGCTCTCCAGT................ 19 0 20 0.05 1 1 0 0
...............................................................................................................................................................................................................................CGGCTCTCCAGTCCTCTGACTCCGCTT. 27 0 20 0.05 1 1 0 0
..............................................................................................................................................................................................................................GCGGCTCTCCAGTCCTCTGACTCCGC... 26 0 20 0.05 1 1 0 0
..............................................................................................................................................................................................................................GCGGCTCTCCAGTCCTCT........... 18 0 20 0.05 1 1 0 0
.......................................................................................................................................................................................................................GAGGTTTGCGGCTCTCCA.................. 18 0 20 0.05 1 1 0 0
.........................................................................................................................................................................................................................GGTTTGCGGCTCTCCAGTCCTCTGACT....... 27 0 20 0.05 1 1 0 0
..................................................................................................................................................................................................................................ATCTCCAGTCCTCTGACTCCGCT.. 23 1 20 0.05 1 1 0 0
..........................................................................................................................................................................................................................GTTTGCGGCTCTCCAGTCCTCC........... 22 1 20 0.05 1 1 0 0
..........................................................................................................................................................................................................................GTTTGCGGCTCTCCAGTCCTCTGACG....... 26 1 20 0.05 1 1 0 0
..............................................................................................................................................................................................................................GCGGCTCTCCAGTCCTCTGACTC...... 23 0 20 0.05 1 1 0 0
.............................................................................................................................................................................................................................TTCGGCTCTCCAGTCCTCTGACC....... 23 2 20 0.05 1 1 0 0
..........................................................................................................................................................................................................................GTTTGCGGCTCTCCAGTCCT............. 20 0 20 0.05 1 0 1 0
.............................................................................................................................................................................................................................TGCGGCTCTCCAGTGCTCTGACT....... 23 1 20 0.05 1 1 0 0
..................................................................................................................................................................................................................................CTCTCCAGTCCTCTGACTCCGCTT. 24 0 20 0.05 1 1 0 0
................................................................................................................................................................................................................................AGCTCTCCAGTCCTCTGACTCCGCTT. 26 1 20 0.05 1 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_113:66234-66484 - dpe_694 AAAGTC---------------TATTCGCCT----------------GTACCTATTGCATTCCTAAGCTGAG-CTTTAAGCTTTAACATAACTGTGCAATCGGATGATCTTCTGGATCTCCTGCATTCCACCAATTTCTATG---CTATGC--TAGCGAGGGCGGTATGAAAAGTATCTTTCTAGA--AAGTGTACCTAACTTGTTCGACCTTTTCCTT-TTTTCTTTTGATTTTCGAATAGTTGGACACTACACACTCCAAAC-------GCCGAGAGGTCAGGAGACTGAGGCGAAG
dp5 Unknown_group_315:12669-12897 - AAAGTC---------------TATTCGCCT----------------GTACCTATTGCATTCCTAAGCTGAG-CTTTAAGCTTTAACATAACTGTGCAATCGGATGATCTTCTGGATCTCCTGCATTCCACCAATTTCTT-CGAGCTATGC--TAGCGAGGGCGGTATGAAAAGTATCTTTCTAGA--AAGTGTACCTAACTTGTTCGACCTTTTATTTTTTTTCTTTTGATTTTCGAATAGTT--------------------------------GGACACTACACACTTGAACGGCC
droWil2 scf2_1100000013565:306-337 + A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAC-------GTCATGAAGTCAGGAGACTTAGGCGGAG
droVir3 scaffold_13036:256950-256983 + CC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAC-------GCCGGGAGGTCAGGAGACTGAGGCGGAG
droMoj3 scaffold_6482:1077422-1077451 + AC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCGTGCGCTCAGGAGAGTCCGGCGAAG
droAna3 scaffold_13089:921570-921616 - TGGA--------------ACCTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACACGGCGAAACGCGAAGTGAGGAGACTTCGCCGCCG
droBip1 scf7180000391682:9178-9218 - CAACCAGC-------------TG-----------------GGAACTG---------------CAGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCAGTCAGAAGACTTC----ACG
droKik1 scf7180000299557:8645-8866 - TTTTTA---------------TATTATGCTTAAACTCCCAGAAAATG---------------CGGTTTTAG-CTTAAAGCTTTGATATAGCGGTGAAATCGGGTGATGTTCTTGCATTCTTTCATTCCACCTGTTCAAGTGCAAG--TGCATTAGCGAGGGTAGTTATAATAGTTTGC---TAGCTTAATTGTACCTAAACAGAA---GCGTTACCTA---AAGTTTTGTTTTTCCAAAAGGTGGAT--------------------------------ACTACAAAC--TGTCAAAC
droFic1 scf7180000452383:9197-9230 - CC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAC-------GTCAAGAGGTCCGCAGACTGAGGCGTAG
droEle1 scf7180000486518:7068-7101 + CC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGC-------GCCAAGAGGTCAGGAGACTGAGGCGAAG
droRho1 scf7180000770903:15110-15143 + CC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGC-------GCCAAGAGGTCAGGAGACTGAGGCGTAG
droBia1 scf7180000301589:145621-145654 + CC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAC-------GCCAAGAGGTCAGGAGACTGAGGCGCAG
droTak1 scf7180000415270:340-501 + ATTTTC---------------TGGA-GTCT----------------GTACTTCCAATAAT-CTATGCTGAACCAAAAAGCTTTATCATAGCGGTAGTATCGGATGATCTACGCGGTCTCTGTCATTCCACCAGCTACCGACAAAC--TGCA-TAGCGAGGGCAGACCGAAATGTTTGT---AAAT--TTATGTACCTAAGTT-----------------------------------------------------------------------------------------------G
droEug1 scf7180000409784:3345-3390 + ACAGCC---------------TG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACGCGGAGAGGAGTGAAGTGCGGAGGCTTCGCCGCCG
dm3 chr3LHet:487677-487711 - TC-------------------T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAC-------TCCAAGAGGTCAGGAGACTAAGGCTGCG
droSim2 3l:21279237-21279273 + ATTC-----------------T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAC-------GCCAAGAGGTCAGGAGACTGAGGCGGCG
droSec2 scaffold_9743:155-215 + CAAATTGGTGGACATTCGACCTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGATTCAAGGCGCGAAGTCCGGAGACTTCGTCGCCT
droYak3 v2_chr3h_random_002:140333-140513 - GAG-TT---------------TGTATGCCG----------------GAAACTC--CCAAAAATGGTCTTCG-CTTAAAGCTTTGCCATAGCGGTGAAATCGGGTGATCTTCCCGTTTTCTTTCATTACACCAATTATAG-C-AAG--TGCATCAGGGAGGGCGGTT---------------------AATTGTACCTAACAATAAATGCCTTTACATT-TAT-----------CCAAAAAGTTGGGC---------------------------------------------ACTACA
droEre2 scaffold_2298:363-388 + C--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGAAGTCTGGAGACTTCGTCGCCG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
AAAGTC---------------TATTCGCCT----------------GTACCTATTGCATTCCTAAGCTGAG-CTTTAAGCTTTAACATAACTGTGCAATCGGATGATCTTCTGGATCTCCTGCATTCCACCAATTTCTATG---CTATGC--TAGCGAGGGCGGTATGAAAAGTATCTTTCTAGA--AAGTGTACCTAACTTGTTCGACCTTTTCCTT-TTTTCTTTTGATTTTCGAATAGTTGGACACTACACACTCCAAAC-------GCCGAGAGGTCAGGAGACTGAGGCGAAGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................................................................................TAACATAACTGTGCAATCGGATGATC..............................................................................................................................................................................................2653.00150141000
......................................................TGCATTCCTAAGCTGAG-CTTTAAGC..........................................................................................................................................................................................................................2542.75110101000
.......................................................................................................................................................................................................................................TTTCGAATAGTTGGACACTACACAC..........................................2522.505050000
.....................................................................................................................................................................................TAGA--AAGTGTACCTAACTTGTTCGACC........................................................................................2732.006060000
.......................................................................................................................................................................................................................................TTTCGAATAGTTGGACACTACACACT.........................................2612.002020000
..................................................................................TAACATAACTGTGCAATCGGATGAT...............................................................................................................................................................................................2551.809540000
..............................................................................................................................................................................................................................TCTTTTGATTTTCGAATAGTTGGACAC.................................................2741.757070000
..................................................................................TAACATAACTGTGCAATCGGATGATCT.............................................................................................................................................................................................2751.608070001
......................................................................................................................................................................TGAAAAGTATCTTTCTAGA--AAGTG..........................................................................................................2431.334040000
........................................................................................................................................................................................................................................TTCGAATAGTTGGACACTACACACTCC.......................................2711.001010000
......................................................................................................................................................................................................................................TTTTCGAATAGTTGGACACTACACACT.........................................2711.001010000
..............................................................................................................................................................................................................................TCTTTTGATTTTCGAATAGTTGGACA..................................................2641.004040000
........................................................................................................................................................................................................................................TTCGAATAGTTGGACACTACACAC..........................................2420.501010000
...............................................................................................................................................................................................................................CTTTTGATTTTCGAATAGTTGGAC...................................................2440.502020000
...................................................................................................................................................................................................................................TGATTTTCGAATAGTTGGACACTACACAC..........................................2920.501010000
...................................................................................................................................................................................................................................TGATTTTCGAATAGTTGGACACTA...............................................2440.502200000
..................................................................................TAACATAACTGTGCAATCGGATGA................................................................................................................................................................................................2450.402200000
...................................................................................AACATAACTGTGCAATCGGATGATCT.............................................................................................................................................................................................2650.402020000
..................................................................................TAACATAACTGTGCAATCGGATG.................................................................................................................................................................................................2350.402020000
.......................................................................................TAACTGTGCAATCGGATGATCTTCT..........................................................................................................................................................................................2550.402020000
.............................................................................................................................TCCACCAATTTCTATG---CTATGC--TAGCGA............................................................................................................................................2830.331010000
.......................................................................................................................................TCTATG---CTATGC--TAGCGAGGGC........................................................................................................................................2230.331001000
..............................................................................................................................................................................ATCTTTCTAGA--AAGTGTACCTAACTTG...............................................................................................2730.331010000
......................................................................................................................................................................................................................................TTTTCGAATAGTTGGACACTACACA...........................................2530.331010000
.....................................................................................................................................................................................TAGA--AAGTGTACCTAACTTGTTCGACCTT......................................................................................2930.331010000
.....................................................................................................................................................................................TAGA--AAGTGTACCTAACTTGTTCGACCT.......................................................................................2830.331010000
.............................................................................................................................................................................TATCTTTCTAGA--AAGTGTACCTAACT.................................................................................................2630.331010000
........................................................................................................................................................................................A--AAGTGTACCTAACTTGTTCGACCTT......................................................................................2630.331010000
......................................................................................................................................TTCTATG---CTATGC--TAGCGAGGGCG.......................................................................................................................................2430.331010000
............................................................................................................................................................................................................TCGACCTTTTCCTT-TTTTCTTTTGATT..................................................................2730.331010000
.........................................................................................................................................................................................................TGTTCGACCTTTTCCTT-TTTTCTTT.......................................................................2530.331010000
.....................................................................................................................TCCTGCATTCCACCAATTTCTATG---C.........................................................................................................................................................2530.331010000
......................................................TGCATTCCTAAGCTGAG-CTTTAAGCT.........................................................................................................................................................................................................................2640.251010000
...................................................TATTGCATTCCTAAGCTGAG-CT................................................................................................................................................................................................................................2240.251010000
....................................................................................................................................................................................................TAACTTGTTCGACCTTTTCCTT-TT.............................................................................2440.251010000
................................................................................................................................................................................................TACCTAACTTGTTCGACCTTTTCCTT-...............................................................................2640.251010000
................................................................................................................................................................................................TACCTAACTTGTTCGACCTTTTCC..................................................................................2440.251010000
.....................TATTCGCCT----------------GTACCTATTGCATTC.............................................................................................................................................................................................................................................2440.251010000
................................................................................................................................................................................................TACCTAACTTGTTCGACCTTTTCCT.................................................................................2540.251010000
.......................................................GCATTCCTAAGCTGAG-CTTTAAG...........................................................................................................................................................................................................................2340.251010000
.............................................................CTAAGCTGAG-CTTTAAGCTTT.......................................................................................................................................................................................................................2140.251010000
......................................................TGCATTCCTAAGCTGAG-CTTTAAG...........................................................................................................................................................................................................................2440.251010000
........................................................................................................................................................................................................................................TTCGAATAGTTGGACACTAC..............................................2040.251100000
...................................................................................................................................................................................................................................TGATTTTCGAATAGTTGGACACT................................................2340.251100000
..................................................................................................TCGGATGATCTTCTGGATCTC...................................................................................................................................................................................2190.222110000
............................................................................................................TTCTGGATCTCCTGCATTCCACCAAT....................................................................................................................................................................2690.222020000
...................................................................................AACATAACTGTGCAATCGGATG.................................................................................................................................................................................................2250.201010000
.............................................................................................TGCAATCGGATGATCTTCTGGATC.....................................................................................................................................................................................2450.201010000
......................................................................................ATAACTGTGCAATCGGATGATCTTCTG.........................................................................................................................................................................................2750.201010000
.................................................................................TTAACATAACTGTGCAATCGGATGATCT.............................................................................................................................................................................................2850.201100000
..................................................................................TAACATAACTGTGCAATCGGATGATCTTC...........................................................................................................................................................................................2950.201010000
...................................................................................AACATAACTGTGCAATCGGATGATC..............................................................................................................................................................................................2550.201010000
.................................................................................TTAACATAACTGTGCAATCGGATG.................................................................................................................................................................................................2450.201010000
...............................................................................................................................................................................................................................CTTTTGATTTTCGAATAGTTGGA....................................................2380.131010000
..............................................................................................................................................................................................................................TCTTTTGATTTTCGAATAGTTGG.....................................................2380.131010000
............................................................................................................TTCTGGATCTCCTGCATTCCACCAATT...................................................................................................................................................................2790.111010000
......................................................................................................ATGATCTTCTGGATCTCCTGCATT............................................................................................................................................................................2490.111010000
........................................................................................................GATCTTCTGGATCTCCTGCATTCCA.........................................................................................................................................................................2590.111010000
.............................................................................................................TCTGGATCTCCTGCATTCCACCAATTT..................................................................................................................................................................2790.111010000
......................................................................................................ATGATCTTCTGGATCTCCTGCATTCC..........................................................................................................................................................................2690.111010000
......................................................................................................ATGATCTTCTGGATCTCCTGCAT.............................................................................................................................................................................2390.111010000
.................................................................................................................................................TATGC--TAGCGAGGGCGGTAT...................................................................................................................................2090.111010000
.......................................................................................................................................................................................................................................................................................TCAGGAGACTGAGGCGAA.18200.102020000
.......................................................................................................................................................................................................................................................................................TCAGGAGACTGAGGCGAAG19200.051010000
......................................................................................................................................................................................................................................................................C-------GCCGAGAGGTCAGGAGACT.........20200.051000001
dp5
AAAGTC---------------TATTCGCCT----------------GTACCTATTGCATTCCTAAGCTGAG-CTTTAAGCTTTAACATAACTGTGCAATCGGATGATCTTCTGGATCTCCTGCATTCCACCAATTTCTT-CGAGCTATGC--TAGCGAGGGCGGTATGAAAAGTATCTTTCTAGA--AAGTGTACCTAACTTGTTCGACCTTTTATTTTTTTTCTTTTGATTTTCGAATAGTT--------------------------------GGACACTACACACTTGAACGGCCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................................................................................TAACATAACTGTGCAATCGGATGATC..............................................................................................................................................................................................261116.2717905050002111110
.......................................................................................................................................................................................................................................TTTCGAATAGTT--------------------------------GGACACTACACACT.........26115.001501000000230
....................................................................................................................................................................TATGAAAAGTATCTTTCTAGA--AAGTG..........................................................................................................26104.404403100115060
..................................................................................TAACATAACTGTGCAATCGGATGATCT.............................................................................................................................................................................................27114.3648021101024010
..................................................................................TAACATAACTGTGCAATCGGATG.................................................................................................................................................................................................23114.004403001001390
..................................................................................TAACATAACTGTGCAATCGGATGA................................................................................................................................................................................................24113.1835014010004160
.......................................................................................................................................................................................................................................TTTCGAATAGTT--------------------------------GGACACTACACAC..........2523.0060500000100
..................................................................................TAACATAACTGTGCAATCGGATGAT...............................................................................................................................................................................................25112.092311520000050
.............................................................................................................TCTGGATCTCCTGCATTCCACCAATT...................................................................................................................................................................26101.30130700000060
.......................................................................................................................................TCTT-CGAGCTATGC--TAGCGAGGGCGG......................................................................................................................................26101.30130100000750
...................................................................................AACATAACTGTGCAATCGGATGATC..............................................................................................................................................................................................25111.00110700000040
.......................................................................................................................................................................................................................................TTTCGAATAGTT--------------------------------GGACACTACACAA..........2521.0020200000000
.......................................................................................................................................................................................................................................TTTCGAATAGTT--------------------------------GGACACTACACACTT........2711.0010100000000
.......................................................................................TAACTGTGCAATCGGATGATCTTC...........................................................................................................................................................................................24111.001101000001000
.......................................................................................................................................................................................................................................TTTCGAATAGTT--------------------------------GGACACTACACA...........2421.0020100000010
.......................................................................................................................................................................................................................................TTTCGAATAGTT--------------------------------GGACACTACAC............2341.0040200000200
...................................................................................................................TCTCCTGCATTCCACCAATTTCTT-CGAGC.........................................................................................................................................................29101.001001000000000
.............................................................................................................................TCCACCAATTTCTT-CGAGCTATGC--..................................................................................................................................................24110.91100910000000
..................................................................................TAACATAACTGTGCAATCGGAT..................................................................................................................................................................................................22110.8290600000120
........................................................................................AACTGTGCAATCGGATGATCTTCTGG........................................................................................................................................................................................26110.8290800001000
........................................................................................AACTGTGCAATCGGATGATCTTCTG.........................................................................................................................................................................................25110.7380800000000
.........................................................................................................................................TT-CGAGCTATGC--TAGCGAGGGCGGTA....................................................................................................................................26100.7070000000070
.........................................................................................................................................TT-CGAGCTATGC--TAGCGAGGGCGG......................................................................................................................................24100.7070000000340
.....................................................................................................................TCCTGCATTCCACCAATTTCTT-CGAGC.........................................................................................................................................................27100.7070610000000
....................................................................................................................................................................TATGAAAAGTATCTTTCTAGA--AAG............................................................................................................24100.7070500000020
.......................................................................................TAACTGTGCAATCGGATGATCTTCTGG........................................................................................................................................................................................27110.6470500000020
.......................................................................................TAACTGTGCAATCGGATGATCTTCTGGA.......................................................................................................................................................................................28110.6470600000010
...........................CCT----------------GTACCTATTGCATTCCTAAGC.......................................................................................................................................................................................................................................2450.6030200000100
............................................................................................................TTCTGGATCTCCTGCATTCCACCAATT...................................................................................................................................................................27100.6060400000020
........................................................................................................................................................................................................................TTTTTTTCTTTTGATTTTCGAATAGT........................................................2690.5650000000500
........................................................................................AACTGTGCAATCGGATGATCTTCT..........................................................................................................................................................................................24110.5560300003000
.......................................................................................TAACTGTGCAATCGGATGATCTTCT..........................................................................................................................................................................................25110.5560210002100
........................................................................................................................................................................................................................................TTCGAATAGTT--------------------------------GGACACTACACAC..........2420.5010100000000
...................................................TATTGCATTCCTAAGCTGAG-CTT...............................................................................................................................................................................................................................2340.5020100001000
.......................................................................................................................................TCTT-CGAGCTATGC--TAGCGAGGGCGGTA....................................................................................................................................28100.5050000000140
.......................................................................................................................................................................................................................................TTTCGAATAGTT--------------------------------GGACACTACA.............22120.5060500000100
........................................................................................................................TGCATTCCACCAATTTCTT-CGAGC.........................................................................................................................................................24100.5050500000000
........................................................................................................................................CTT-CGAGCTATGC--TAGCGAGGGCGG......................................................................................................................................25100.5050000001130
...................................................................................AACATAACTGTGCAATCGGATGA................................................................................................................................................................................................23110.4550200000300
........................................................................................AACTGTGCAATCGGATGATCTTCTGGA.......................................................................................................................................................................................27110.4550500000000
.......................................................................................TAACTGTGCAATCGGATGATCTTCTG.........................................................................................................................................................................................26110.4550400001000
...................................................................................................................................................................................................................................TGATTTTCGAATAGTT--------------------------------GGACACTACA.............26120.4250000000050
...................................................................................................................TCTCCTGCATTCCACCAATTTCTT-CGA...........................................................................................................................................................27100.4040200000020
...................................................................................................................TCTCCTGCATTCCACCAATTTCTT-..............................................................................................................................................................24100.4040400000000
..................................................................................TAACATAACTGTGCAATCGGA...................................................................................................................................................................................................21110.3640200000200
.................................................................................TTAACATAACTGTGCAATCGGATGATC..............................................................................................................................................................................................27110.3640100000030
.................................................................................................................................................TATGC--TAGCGAGGGCGGTATGAAAAG.............................................................................................................................2690.3330000000030
.......................................................................................................................................TCTT-CGAGCTATGC--TAGCGAGGGCGGT.....................................................................................................................................27100.3030000001020
..........................................................................................................................................T-CGAGCTATGC--TAGCGAGGGCGG......................................................................................................................................23100.3030200000010
.............................................................................................................................TCCACCAATTTCTT-CGAGCTATGC--TAGC..............................................................................................................................................28110.2730300000000
.............................................................................................................................TCCACCAATTTCTT-CGAGCTATG.....................................................................................................................................................23110.2730300000000
.............................................................................................................................TCCACCAATTTCTT-CGAGCTATGC--TAG...............................................................................................................................................27110.2730300000000
...............................................................................CTTTAACATAACTGTGCAATCGGA...................................................................................................................................................................................................24110.2730300000000
..................................................................................TAACATAACTGTGCAATCGG....................................................................................................................................................................................................20110.2730000000030
...................................................................................AACATAACTGTGCAATCGGATGATCT.............................................................................................................................................................................................26110.2730001002000
................................................................................TTTAACATAACTGTGCAATCGGATG.................................................................................................................................................................................................25110.2730000000030
...............................................TACCTATTGCATTCCTAAGCTGAG-CTT...............................................................................................................................................................................................................................2740.2510100000000
....TC---------------TATTCGCCT----------------GTACCTATTGCATTCC............................................................................................................................................................................................................................................2740.2510000000010
.....................TATTCGCCT----------------GTACCTATTGCATTCC............................................................................................................................................................................................................................................2540.2510100000000
.......................................................................................................................................................................................................................................TTTCGAATAGTT--------------------------------GGACACT................19120.2530200000010
...............................................TACCTATTGCATTCCTAAGCTGAG-C.................................................................................................................................................................................................................................2540.2510100000000
..........................................................................................................................................................................................................................TTTTTCTTTTGATTTTCGAATAGT........................................................24120.2530000000300
.....................................................TTGCATTCCTAAGCTGAG-CTTT..............................................................................................................................................................................................................................2240.2510000010000
............................................................................................................TTCTGGATCTCCTGCATTCCACCA......................................................................................................................................................................24100.2020200000000
......................ATTCGCCT----------------GTACCTATTGCATTCCTAAGC.......................................................................................................................................................................................................................................2950.2010100000000
............................................................................................................TTCTGGATCTCCTGCATTCCACCAAT....................................................................................................................................................................26100.2020100000010
........................................................................................................................TGCATTCCACCAATTTCTT-CGA...........................................................................................................................................................22100.2020200000000
.................................................................................................................................................TATGC--TAGCGAGGGCGGTATGAAA...............................................................................................................................24100.2020000000020
...............................................TACCTATTGCATTCCTAAGCTGAG-..................................................................................................................................................................................................................................2450.2010000000010
..........................................................................................................................................T-CGAGCTATGC--TAGCGAGGGC........................................................................................................................................21100.2020200000000
.............................................................................................................TCTGGATCTCCTGCATTCCACCAAT....................................................................................................................................................................25100.2020200000000
....................................................................................................................CTCCTGCATTCCACCAATTTCTT-CGAGC.........................................................................................................................................................28100.2020200000000
.................................................................................................................................................TATGC--TAGCGAGGGCGGTATG..................................................................................................................................21100.2020100000010
..........................................................................................................................................T-CGAGCTATGC--TAGCGAGGGCGGTA....................................................................................................................................25100.2020100000010
.............................................................................................................TCTGGATCTCCTGCATTCCACC.......................................................................................................................................................................22100.2020200000000
..................................................................................................TCGGATGATCTTCTGGATCTC...................................................................................................................................................................................21110.1820110000000
...................................................................................AACATAACTGTGCAATCGGATG.................................................................................................................................................................................................22110.1820200000000
..................................................................................................TCGGATGATCTTCTGGATCTCC..................................................................................................................................................................................22110.1820200000000
.........................................................................................ACTGTGCAATCGGATGATCTTCT..........................................................................................................................................................................................23110.1820200000000
................................................................................................AATCGGATGATCTTCTGGATC.....................................................................................................................................................................................21110.1821100000000
...........................................................................................................................ATTCCACCAATTTCTT-CGAGCTATGC--..................................................................................................................................................26110.1820200000000
...........................................................................................TGTGCAATCGGATGATCTTCTGGA.......................................................................................................................................................................................24110.1820100000010
.......................................................................................................................................................................................................................................TTTCGAATAGTT--------------------------------GGACACTACACT...........2460.1710100000000
.........................................................................................................................................................................................................................TTTTTTCTTTTGATTTTCGAATAG.........................................................24120.1720000000020
.......................................................................................................................................................................................................................TTTTTTTTCTTTTGATTTTCGAATAGT........................................................2770.1410100000000
........................................................................................................................................................TAGCGAGGGCGGTATGAAAAGTATCTC.......................................................................................................................2790.1110000001000
.................................................................................................................................................................CGGTATGAAAAGTATCTTTCTAGA--AAG............................................................................................................2790.1110100000000
........................................................................................................................................CTT-CGAGCTATGC--TAGCGAGGGCGGTA....................................................................................................................................27100.1010000000010
....................................................................................................................CTCCTGCATTCCACCAATTTCTT-CGAGT.........................................................................................................................................................28100.1010000000010
...............................................................................................................TGGATCTCCTGCATTCCACCAATT...................................................................................................................................................................24100.1010100000000
...................................................................................................................TCTCCTGCATTCCACCAATTTCTT-CG............................................................................................................................................................26100.1010100000000
............................................................................................................................................CGAGCTATGC--TAGCGAGGGCGGT.....................................................................................................................................23100.1010000000010
.......................................................................................................................................TCTT-CGAGCTATGC--TAGCGAGGGC........................................................................................................................................24100.1010000100000
........................................................................................................................TGCATTCCACCAATTTCTT-CGAGCTAT......................................................................................................................................................27100.1010100000000
........................................................................................................................TGCATTCCACCAATTTCTT-CG............................................................................................................................................................21100.1010100000000
....................................................................................................................................................................TATGAAAAGTATCTTTCTAGA--AA.............................................................................................................23100.1010100000000
.....................................................................................................................................................................ATGAAAAGTATCTTTCTAGA--AAGT...........................................................................................................24100.1010100000000
..............................................................................................................................................AGCTATGC--TAGCGAGGGCGG......................................................................................................................................20100.1010100000000
.......................................................................................................TGATCTTCTGGATCTCCTGCA..............................................................................................................................................................................21100.1010100000000
......................................................................................................................................TTCTT-CGAGCTATGC--TAGCGAGGGCGT......................................................................................................................................27100.1010100000000
............................................................................................................................................CGAGCTATGC--TAGCGAGGGCGG......................................................................................................................................22100.1010000000010
..................................................................................................TCGGATGATCTTCTGGATCTCCTGCA..............................................................................................................................................................................26100.1010100000000
.....................................................................................................................................TTTCTT-CGAGCTATGC--TAGCGAGGGCGG......................................................................................................................................28100.1010000000010
........................................................................................................................TGCATTCCACCAATTTCTT-CGAG..........................................................................................................................................................23100.1010100000000
............................................................................................................TTCTGGATCTCCTGCATTCCACCAATTTC.................................................................................................................................................................29100.1010100000000
......................................................................................................................................TTCTT-CGAGCTATGC--TAGCGAGGGCGG......................................................................................................................................27100.1010000000100
..............................................................................................................................................AGCTATGC--TAGCGAGGGCGGTAT...................................................................................................................................23100.1010000000010
.............................................................................................................TCTGGATCTCCTGCATTCCACCA......................................................................................................................................................................23100.1010100000000
...........................................................................................................CTTCTGGATCTCCTGCATTCCACCAATT...................................................................................................................................................................28100.1010100000000
........................................................................................................................................CTT-CGAGCTATGC--TAGCGAGGGC........................................................................................................................................23100.1010100000000
..........................................................................................................................................T-CGAGCTATGC--TAGCGAGGGCGGT.....................................................................................................................................24100.1010100000000
.....................................................................................................................................................................ATGAAAAGTATCTTTCTAGA--AAGTG..........................................................................................................25100.1010000000010
...............................................................................................................TGGATCTCCTGCATTCCACCAATTTCTT-..............................................................................................................................................................28100.1010000000100
....................................................................................................................CTCCTGCATTCCACCAATTTCTT-CGAGCT........................................................................................................................................................29100.1010100000000
...................................................................................................................................................TGC--TAGCGAGGGCGGTATGAAA...............................................................................................................................22100.1010000000010
............................................................................................................................................CGAGCTATGC--TAGCGAGGGC........................................................................................................................................20100.1010000001000
..................................................................................................TCGGATGATCTTCTGGATCTCCTGC...............................................................................................................................................................................25100.1010100000000
............................................................................................................TTCTGGATCTCCTGCATTC...........................................................................................................................................................................19100.1010100000000
........................................................................................................................TGCATTCCACCAATTTCTT-CGAGCA........................................................................................................................................................25100.1010100000000
...............................................................................................................TGGATCTCCTGCATTCCACCAATTTC.................................................................................................................................................................26100.1010000000010
...........................................................................TAAGCTTTAACATAACTGTGCAATCGGA...................................................................................................................................................................................................28110.0910100000000
.........................................................................................................................GCATTCCACCAATTTCTT-CGAGC.........................................................................................................................................................23110.0910100000000
........................................................................................AACTGTGCAATCGGATGATCTTC...........................................................................................................................................................................................23110.0910100000000
......................................................................................................................................TTCTT-CGAGCTATGC--TAGCG.............................................................................................................................................20110.0910100000000
..................................................................................TAACATAACTGTGCAATCGGATGATCTC............................................................................................................................................................................................28110.0910000001000
.....................TATTCGCCT----------------GTACCTATTGCAT...............................................................................................................................................................................................................................................22110.0910100000000
..................................................................................TAACATAACTGTGCAATCGGATGATCTTC...........................................................................................................................................................................................29110.0910000001000
.....................................................................................................................................TTTCTT-CGAGCTATGC--TAGCGA............................................................................................................................................22110.0910100000000
.....C---------------TATTCGCCT----------------GTACCTATTGC.................................................................................................................................................................................................................................................21110.0910000000100
.........................................................................................................................................TT-CGAGCTATGC--TAGCGAGGG.........................................................................................................................................21110.0910100000000
.......................................................................................................................................TCTT-CGAGCTATGC--TAGCGAGGG.........................................................................................................................................23110.0910000000010
.................................................................................TTAACATAACTGTGCAATCGGATGA................................................................................................................................................................................................25110.0910100000000
.AAGTC---------------TATTCGCCT----------------GTACCTATTGCA................................................................................................................................................................................................................................................26110.0910100000000
...................................................................................AACATAACTGTGCAATCGGATGATA..............................................................................................................................................................................................25110.0910100000000
..................................................................................TAACATAACTGTGCAATCGGATA.................................................................................................................................................................................................23110.0910100000000
..................................................................................................TCGGATGATCTTCTGGATCT....................................................................................................................................................................................20110.0910100000000
............................................................................................................................TTCCACCAATTTCTT-CGAGCTATGC--..................................................................................................................................................25110.0910100000000
.................................................................................TTAACATAACTGTGCAATCGGATGATCT.............................................................................................................................................................................................28110.0910000001000
............................................................................................................................TTCCACCAATTTCTT-CGAGCTATG.....................................................................................................................................................24110.0910100000000
.......................................................................................TAACTGTGCAATCGGATGATCT.............................................................................................................................................................................................22110.0910000001000
.......................................................................................TAACTGTGCAATCGGATGATCTT............................................................................................................................................................................................23110.0910100000000
.............................................................................................TGCAATCGGATGATCTTCTGGATCTCC..................................................................................................................................................................................27110.0910100000000
...............................................................................CTTTAACATAACTGTGCAATCGGAT..................................................................................................................................................................................................25110.0910100000000
.............................................................................................TGCAATCGGATGATCTTCTG.........................................................................................................................................................................................20110.0910100000000
...................................................................................................CGGATGATCTTCTGGATCTC...................................................................................................................................................................................20110.0910100000000
..................................................................................TAACATAACTGTGCAATCGGATGATCTT............................................................................................................................................................................................28110.0910000001000
.........................................................................................................................GCATTCCACCAATTTCTT-CGAGCT........................................................................................................................................................24110.0910100000000
..........................................................................................CTGTGCAATCGGATGATCTTCTGG........................................................................................................................................................................................24110.0910100000000
.......................................................................................TAACTGTGCAATCGGATGATC..............................................................................................................................................................................................21110.0910000000001
.................................................................................TTAACATAACTGTGCAATCGGAT..................................................................................................................................................................................................23110.0910100000000
...................................................................................AACATAACTGTGCAATCGGATGATCTT............................................................................................................................................................................................27110.0910000001000
....................................................................................ACATAACTGTGCAATCGGATGAT...............................................................................................................................................................................................23110.0910100000000
....TC---------------TATTCGCCT----------------GTACCTATTGCAT...............................................................................................................................................................................................................................................24110.0910000000010
...........................................................................................TGTGCAATCGGATGATCTTCTGGATC.....................................................................................................................................................................................26110.0910100000000
..................................................................................TAACATAACTGTGCAATCGGATGATCA.............................................................................................................................................................................................27110.0910100000000
.......................................................................................................................................................................................................................................TTTCGAATAGTT--------------------------------GGACACTA...............20120.0810100000000
..........................................................................................................................................................................................................................TTTTTCTTTTGATTTTCGAATAGTT--------------------------------GG.....................27120.0810100000000
................................................................................................................................................................................................................................TTTTGATTTTCGAATAGTT--------------------------------GGACACTA...............27120.0810000000010
..............................................................................................................................................................................................................................TCTTTTGATTTTCGAATAGTT--------------------------------GGACAC.................27120.0810100000000
...................................................................................................................................................................................................................................TGATTTTCGAATAGTT--------------------------------GGACACT................23120.0810100000000
.............................................................................................................................................................................................................................TTCTTTTGATTTTCGAATAGTT--------------------------------GGACAC.................28120.0810100000000
.......................................................................................................................................................................................................................................TTTCGAATAGTT--------------------------------GGACACTAGG.............22120.0810100000000
..............................................................................................................................................................................................................................TCTTTTGATTTTCGAATAGTT--------------------------------GGAC...................25120.0810000100000
...................................................................................................................................................................................................................................TGATTTTCGAATAGTT--------------------------------GGAC...................20120.0810100000000
....................................................................GAG-CTTTAAGCTTTAACATAACTG.............................................................................................................................................................................................................24120.0810100000000
.AAGTC---------------TATTCGCCT----------------GTACCTA.....................................................................................................................................................................................................................................................21120.0810100000000
droWil2
A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAC-------GTCATGAAGTCAGGAGACTTAGGCGGAGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....................................................................................................................................................................................................................................................................AAC-------GTCATGAAGTCAGGAGACTT........23112.0022017230
....................................................................................................................................................................................................................................................................AAC-------GTCATGAAGTCAGGAGACTTAGG.....26111.0912011010
.....................................................................................................................................................................................................................................................................AC-------GTCATGAAGTCAGGAGACTTAGG.....25110.73808000
....................................................................................................................................................................................................................................................................AAC-------GTCATGAAGTCAGGAGACTTA.......24110.55605100
....................................................................................................................................................................................................................................................................AAC-------GTCATGAAGTCAGGAGACT.........22110.55606000
................................................................................................................................................................................................................................................................................CATGAAGTCAGGAGACTTAGGCGG..24100.50505000
................................................................................................................................................................................................................................................................................CATGAAGTCAGGAGACTTAGGCGGA.25100.40413000
....................................................................................................................................................................................................................................................................AAC-------GTCATGAAGTCAGGAGACTTAG......25110.36404000
.....................................................................................................................................................................................................................................................................AC-------GTCATGAAGTCAGGAGACTTA.......23110.36404000
A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAC-------GTCATGAAGTCAGGAGACT.........23110.27303000
A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAC-------GTCATGAAGTCAGGAGACTTAGG.....27110.18202000
....................................................................................................................................................................................................................................................................AAC-------GTCATGAAGTCAGGAGACTTAGGC....27110.18202000
.....................................................................................................................................................................................................................................................................AC-------GTCATGAAGTCAGGAGACTT........22110.18202000
................................................................................................................................................................................................................................................................................CATGAAGTCAGGAGACTTAGGC....22110.18202000
................................................................................................................................................................................................................................................................................CATGAAGTCAGGAGACTTAGGCG...23100.10101000
..................................................................................................................................................................................................................................................................................TGAAGTCAGGAGACTTAGGCGG..22100.10101000
.....................................................................................................................................................................................................................................................................AC-------GTCATGAAGTCAGGAGACTTAGGCG...27100.10101000
.......................................................................................................................................................................................................................................................................................TCAGGAGACTTAGGCGGA.18110.09101000
.................................................................................................................................................................................................................................................................................ATGAAGTCAGGAGACTTAGG.....20110.09101000
......................................................................................................................................................................................................................................................................C-------GTCATGAAGTCAGGAGACTT........21110.09101000
......................................................................................................................................................................................................................................................................C-------GTCATGAAGTCAGGAGACTTAGG.....24110.09101000
....................................................................................................................................................................................................................................................................AAC-------GTCATGAAGTCAGGAGAC..........21110.09101000
................................................................................................................................................................................................................................................................................CATGAAGTCAGGAGACTTAGG.....21110.09101000
.....................................................................................................................................................................................................................................................................AC-------GTCATGAAGTCAGGAGACTTAGGC....26110.09100100
droVir3
CC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAC-------GCCGGGAGGTCAGGAGACTGAGGCGGAGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......................................................................................................................................................................................................................................................................C-------GCCGGGAGGTCAGGAGACTGAGG.....2460.171000000000010000000000000000000000000000000000000000000000000000
CC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAC-------GCCGGGAGGTCAGGAGACTGA.......2780.131001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................CCGGGAGGTCAGGAGACTGAGG.....2280.131000000000000000000000000001000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................AAAC-------GCCGGGAGGTCAGGAGA...........21160.132000000000000000000000000010010000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................GCCGGGAGGTCAGGAGACTGA.......21100.101000000000000000000000000000010000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................GTCAGGAGACTGAGGCGGAG20110.091000000000000000000000000000010000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................AGGTCAGGAGACTGAGGTA...19110.091000000000000000000000000000000000000000100000000000000000000000
....................................................................................................................................................................................................................................................................................AGGTCAGGAGACTGAGGCGGA.21110.091000000000000000000000000000010000000000000000000000000000000000
......................................................................................................................................................................................................................................................................C-------GCCGGGAGGTCAGGAGACTG........21150.071000000000000000000000000000010000000000000000000000000000000000
...................................................................................................................................................................................................................................................................AAAC-------GCCGGGAGGTCAGGA.............19160.061000000000000000000000000000001000000000000000000000000000000000
.C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAC-------GCCGGGAGGTCAGGAG............21160.061000000000000000000000000000000000010000000000000000000000000000
.C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAC-------GCCGGGAGGTCAGGAGAC..........23160.061000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................AC-------GCCGGGAGGTCAGGAGACT.........21160.061000000010000000000000000000000000000000000000000000000000000000
CC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAC-------GCCGGGAGGTCA................18200.051000000000000000000000000000000000010000000000000000000000000000
droMoj3
AC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCGTGCGCTCAGGAGAGTCCGGCGAAGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...................................................................................................................................................................................................................................................................................GCGCTCAGGAGAGTCCGGCG...2021.503000003
..................................................................................................................................................................................................................................................................................TGCGCTCAGGAGAGTCCGGCG...2120.501100000
droAna3
TGGA--------------ACCTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACACGGCGAAACGCGAAGTGAGGAGACTTCGCCGCCGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...A--------------ACCTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACACGGCGAAACGCGAAG...................25200.204310000
......................................................................................................................................................................................................................................................................................GTGAGGAGACTTCGCCGCCG20100.101100000
..................ACCTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACACGGCGAAACGCGAAG...................24200.051100000
...A--------------ACCTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACACGGCGAAACGCG......................22200.051010000
droBip1
CAACCAGC-------------TG-----------------GGAACTG---------------CAGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCAGTCAGAAGACTTC----ACGSizeHit CountTotal NormTotal
No Reads
droKik1
TTTTTA---------------TATTATGCTTAAACTCCCAGAAAATG---------------CGGTTTTAG-CTTAAAGCTTTGATATAGCGGTGAAATCGGGTGATGTTCTTGCATTCTTTCATTCCACCTGTTCAAGTGCAAG--TGCATTAGCGAGGGTAGTTATAATAGTTTGC---TAGCTTAATTGTACCTAAACAGAA---GCGTTACCTA---AAGTTTTGTTTTTCCAAAAGGTGGAT--------------------------------ACTACAAAC--TGTCAAACSizeHit CountTotal NormTotal
No Reads
droFic1
CC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAC-------GTCAAGAGGTCCGCAGACTGAGGCGTAGSizeHit CountTotal NormTotal
No Reads
droEle1
CC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGC-------GCCAAGAGGTCAGGAGACTGAGGCGAAGSizeHit CountTotal NormTotal
No Reads
droRho1
CC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGC-------GCCAAGAGGTCAGGAGACTGAGGCGTAGSizeHit CountTotal NormTotal
No Reads
droBia1
CC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAC-------GCCAAGAGGTCAGGAGACTGAGGCGCAGSizeHit CountTotal NormTotal
No Reads
droTak1
ATTTTC---------------TGGA-GTCT----------------GTACTTCCAATAAT-CTATGCTGAACCAAAAAGCTTTATCATAGCGGTAGTATCGGATGATCTACGCGGTCTCTGTCATTCCACCAGCTACCGACAAAC--TGCA-TAGCGAGGGCAGACCGAAATGTTTGT---AAAT--TTATGTACCTAAGTT-----------------------------------------------------------------------------------------------GSizeHit CountTotal NormTotal
No Reads
droEug1
ACAGCC---------------TG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACGCGGAGAGGAGTGAAGTGCGGAGGCTTCGCCGCCGSizeHit CountTotal NormTotal
No Reads
dm3
TC-------------------T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAC-------TCCAAGAGGTCAGGAGACTAAGGCTGCGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................................................................................................................................................................................................................................................................CAAGAGGTCAGGAGACTAAGGCTG..2418.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAC-------TCCAAGAGGTCAGGAGACT.........2416.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................AGAGGTCAGGAGACTAAGGCT...2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................AC-------TCCAAGAGGTCAGGAGACTAAGGC....2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
......................................................................................................................................................................................................................................................................C-------TCCAAGAGGTCAGGAGACTAAGG.....2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................CCAAGAGGTCAGGAGACTAAGG.....2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................AC-------TCCAAGAGGTCAGGAGACTAAGGCT...2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................AAC-------TCCAAGAGGTCAGGAGACT.........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...................................................................................................................................................................................................................................................................AAAC-------TCCAAGAGGTCAGGAGACTAAGG.....2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAC-------TCCAAGAGGTCAGGAGACTAA.......2611.0010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.C-------------------T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAC-------TCCAAGAGGTCAGGA.............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
droSim2
ATTC-----------------T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAC-------GCCAAGAGGTCAGGAGACTGAGGCGGCGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
No Reads
droSec2
CAAATTGGTGGACATTCGACCTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGATTCAAGGCGCGAAGTCCGGAGACTTCGTCGCCTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.............................................................................................................................................................................................................................................................................AGGCGCGAAGTCCGGAGACTTCGTC....25200.2040040
............................................................................................................................................................................................................................................................................AAGGCGCGAAGTCCGGAGACTTCGTC....26200.0510010
droYak3
GAG-TT---------------TGTATGCCG----------------GAAACTC--CCAAAAATGGTCTTCG-CTTAAAGCTTTGCCATAGCGGTGAAATCGGGTGATCTTCCCGTTTTCTTTCATTACACCAATTATAG-C-AAG--TGCATCAGGGAGGGCGGTT---------------------AATTGTACCTAACAATAAATGCCTTTACATT-TAT-----------CCAAAAAGTTGGGC---------------------------------------------ACTACASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
C--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCGAAGTCTGGAGACTTCGTCGCCGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 06/08/2015 at 03:05 PM