ID:

dpe_690

 Coordinate:

scaffold_1123:3278-3428 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-33.0 -32.9 -32.7

Flybase annnotation

exon [dper_GLEANR_16627:1]; CDS [Dper\GL15425-cds]; intron [Dper\GL15425-in]

Repeatable elements

NameClassFamilyStrand
Nobel_I-intLTRPao+
Nobel_LTRLTRPao+
mature
  1. scaffold_1081:6268-6286 +
  2. scaffold_180:15588-15606 +
  3. scaffold_1021:1066-1084 +
  4. scaffold_420:11367-11385 +
  5. scaffold_81:30465-30483 +
  6. scaffold_3021:2225-2243 +
  7. scaffold_3089:2679-2697 +
  8. scaffold_3532:1690-1708 +
  9. scaffold_1253:4618-4636 +
  10. scaffold_3741:1122-1140 +
  11. scaffold_1858:1904-1922 +
  12. scaffold_1943:1996-2014 +
  13. scaffold_6651:1050-1068 +
  14. scaffold_8861:530-548 +
  15. scaffold_8912:77-95 +
  16. scaffold_7060:999-1017 +
  17. scaffold_230:21008-21026 +
  18. scaffold_10168:753-771 +
  19. scaffold_7853:495-513 +
  20. scaffold_10461:379-397 +
  21. scaffold_185:71505-71523 +
  22. scaffold_125:96233-96251 +
  23. scaffold_197:58285-58303 +
  24. scaffold_2838:377-395 +
  25. scaffold_3209:261-279 +
  26. scaffold_3271:1498-1516 +
  27. scaffold_224:21722-21740 +
  28. scaffold_377:7567-7585 +
  29. scaffold_994:6842-6860 +
  30. dpe_690  scaffold_1123:3294-3312 +
  31. scaffold_3731:498-516 +
  32. scaffold_1591:600-618 +
  33. scaffold_4147:1563-1581 +
  34. scaffold_1684:3706-3724 +
  35. scaffold_1989:2027-2045 +
  36. scaffold_472:9530-9548 +
  37. scaffold_396:13502-13520 +
  38. scaffold_360:16151-16169 +
  39. scaffold_6277:1148-1166 +
  40. scaffold_8696:348-366 +
  41. scaffold_164:47422-47440 +
  42. scaffold_164:65836-65854 +
  43. scaffold_75:205339-205357 +
  44. scaffold_54:391449-391467 +
  45. scaffold_326:4195-4213 +
  46. scaffold_860:6566-6584 +
  47. scaffold_100:111061-111079 +
  48. scaffold_2732:2049-2067 +
  49. scaffold_3167:2512-2530 +
  50. scaffold_4026:3864-3882 +
  51. scaffold_4117:764-782 +
  52. scaffold_1700:2462-2480 +
  53. scaffold_1805:1283-1301 +
  54. scaffold_9395:449-467 +
  55. scaffold_8111:997-1015 +
star
  1. scaffold_1021:1148-1168 +
  2. scaffold_81:30547-30567 +
  3. scaffold_125:96315-96335 +
  4. scaffold_2838:459-479 +
  5. scaffold_3167:2594-2614 +
  6. scaffold_4026:3946-3966 +
  7. scaffold_3265:2027-2047 +
  8. scaffold_490:12682-12702 +
  9. scaffold_3556:2299-2319 +
  10. scaffold_1269:5642-5662 +
  11. scaffold_1846:3678-3698 +
  12. scaffold_4462:119-139 +
  13. scaffold_1943:2078-2098 +
  14. scaffold_4749:653-673 +
  15. scaffold_5634:857-877 +
  16. scaffold_6651:1132-1152 +
  17. scaffold_7060:1081-1101 +
  18. scaffold_230:21090-21110 +
  19. scaffold_10168:835-855 +
  20. scaffold_7853:577-597 +
  21. scaffold_419:9254-9274 +
  22. scaffold_70:208903-208923 +
  23. dpe_2072  scaffold_75:228695-228715 +
  24. scaffold_28:40866-40886 +
  25. scaffold_979:2719-2739 +
  26. scaffold_109:95484-95504 +
  27. scaffold_199:62683-62703 +
  28. scaffold_100:111143-111163 +
  29. scaffold_3271:1580-1600 +
  30. scaffold_274:20398-20418 +
  31. scaffold_3457:1878-1898 +
  32. dpe_690  scaffold_1123:3376-3396 +
  33. scaffold_1591:682-702 +
  34. scaffold_472:9612-9632 +
  35. scaffold_396:13584-13604 +
  36. scaffold_648:10185-10205 +
  37. scaffold_200:4004-4024 +
  38. scaffold_200:6318-6338 +
  39. scaffold_9641:281-301 +
  40. scaffold_7972:573-593 +

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AGGGGCTCCTCGGAAGGGTGGTCGTTACAACCGCCGGGCAGGACGGAAGGGTCAGAGTGGTCGACCTAAGGACGAGCAGCGGAGCCACGTTCAGGAGGCCAATCCACAAGTTGGCTCTTCTGCCAATGGTTTGAAGCCTTCCAGTCCTTCAACGGGGCCGGTGTAGCGCCATTTGGCGTATAATAATTGTTATTAGGATCGTATTTTATGAAGTCTAGTGTAAGTTAGGCTAGGGCAAAGCGGGAGCGCAA
******************************************************************......((.(((.(((..((.((((.((((((((((.(((....(((((......)))))))).)))..)))......))))..)))))).))).)))..)).********************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 V111
male body		 V042
embryo
 M021
embryo
......................................CAGGACGGAAGGGTCAGAGTGGTC............................................................................................................................................................................................. 24 0 20 0.75 15 15 0 0 0
......................................................................................................................................................................................................TCGTATTTTATGAAGTCTAGTGTA............................. 24 0 20 0.15 3 0 3 0 0
..................................................................TAAGGACGAGCAGCGGAGC...................................................................................................................................................................... 19 0 20 0.15 3 0 2 1 0
..................................................................TAAGGACGAGCAGCGGAGT...................................................................................................................................................................... 19 1 20 0.10 2 2 0 0 0
....................................................................................................................................................TCAACGGGGCCGGTGTAGCGC.................................................................................. 21 0 20 0.10 2 0 2 0 0
....................................................................................................................................................................................TAATAATTGTTATTAGGA..................................................... 18 0 20 0.10 2 2 0 0 0
.................................................................................................................................................CCTTCAACGGGGCCGGTGTAGCGCCA................................................................................ 26 0 20 0.10 2 2 0 0 0
.......................................AGGACGGAAGGGTCAGAGTGGTCG............................................................................................................................................................................................ 24 0 20 0.05 1 1 0 0 0
......................................CAGGACGGAAGGGTCAGAGTGGA.............................................................................................................................................................................................. 23 1 20 0.05 1 1 0 0 0
...................................................................AAGGACGAGCAGCGGAGCA..................................................................................................................................................................... 19 1 20 0.05 1 1 0 0 0
...............................................................................................................................................................................................................ATGAAGTCTAGTGTAAGTTAGGC..................... 23 0 20 0.05 1 1 0 0 0
....................................................................................................................................................................................................................GTCTAGTGTAAGTTAGGCTAGGG................ 23 0 20 0.05 1 1 0 0 0
......................................................................................ACGTTCAGGAGGCCAATCCAC................................................................................................................................................ 21 0 20 0.05 1 1 0 0 0
..........................ACAACCGCCGGGCAGGACG.............................................................................................................................................................................................................. 19 0 20 0.05 1 0 0 0 1
...........................................................................................................................................................................................................................GTAAGTTAGGCTAGGGCAAAG........... 21 0 20 0.05 1 1 0 0 0
...........................................................................................................................................................................................................TTTTATGAAGTCTAGTGT.............................. 18 0 20 0.05 1 1 0 0 0
.........................................................................................................................................................................................................................GTGTAAGTTAGGCTAGGGCAAAG........... 23 0 20 0.05 1 0 1 0 0
...........................................................................................................................................................GGCCGGTGTAGCGCCATTTGG........................................................................... 21 0 20 0.05 1 1 0 0 0
......................................................................................GCGTTCAGGAGGCCAATCCACAAG............................................................................................................................................. 24 1 20 0.05 1 1 0 0 0
......................................................................................ACGTTCAGGAGGCCAATCCACAAG............................................................................................................................................. 24 0 20 0.05 1 1 0 0 0
......................................CAGGACGGAAGGGTCAGAGTGG............................................................................................................................................................................................... 22 0 20 0.05 1 0 0 1 0
...........................CAACCGCCGGGCAGGACGGAAGGGTC...................................................................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0
....................................................................................................................................................TCAACGGGACCGGTGTAGCGCCATT.............................................................................. 25 1 20 0.05 1 1 0 0 0
.................................................................CTAAGGACGAGCAGCGGAGC...................................................................................................................................................................... 20 0 20 0.05 1 0 1 0 0
............................................................................................................................................................................................................TTTATGAAGTCTAGTGTAAGT.......................... 21 0 20 0.05 1 1 0 0 0
..................................................................TAAGGACGAGCAGCGGAGCCACG.................................................................................................................................................................. 23 0 20 0.05 1 1 0 0 0
......................................CAGGACGGGAGGGTCAGAGTGGT.............................................................................................................................................................................................. 23 1 20 0.05 1 1 0 0 0
.....................................GCAGGACGGAAGGGTCAGAGTGG............................................................................................................................................................................................... 23 0 20 0.05 1 0 1 0 0
...................................................................................................................................................................................................................................GGCTAGGGCAAAGCGGGAGCGC.. 22 0 20 0.05 1 1 0 0 0
..................................................................TAAGGACGAGCAGCGGAG....................................................................................................................................................................... 18 0 20 0.05 1 1 0 0 0
.........................................................................................TTCAGGAGGCCAATCCACAAGTTG.......................................................................................................................................... 24 0 20 0.05 1 1 0 0 0

Anti-sense strand reads

TCCCCGAGGAGCCTTCCCACCAGCAATGTTGGCGGCCCGTCCTGCCTTCCCAGTCTCACCAGCTGGATTCCTGCTCGTCGCCTCGGTGCAAGTCCTCCGGTTAGGTGTTCAACCGAGAAGACGGTTACCAAACTTCGGAAGGTCAGGAAGTTGCCCCGGCCACATCGCGGTAAACCGCATATTATTAACAATAATCCTAGCATAAAATACTTCAGATCACATTCAATCCGATCCCGTTTCGCCCTCGCGTT
**********************************************************************************......((.(((.(((..((.((((.((((((((((.(((....(((((......)))))))).)))..)))......))))..)))))).))).)))..)).****************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 M021
embryo
 V111
male body
................................................CCCAGTCTCACCAGCTGGATT...................................................................................................................................................................................... 21 0 20 0.15 3 3 0 0
.........................ATGTTGGCGGCCCGACCTGCCTT........................................................................................................................................................................................................... 23 1 15 0.07 1 1 0 0
.......................AAAATTTGGCGGCCCGTCCTGCCTT........................................................................................................................................................................................................... 25 3 15 0.07 1 1 0 0
......................TAACTGTTGGCGGCCCGTCCTGCCTT........................................................................................................................................................................................................... 26 3 16 0.06 1 1 0 0
......................AAAATGTTGGCGGCCCGTCCTGCCTT........................................................................................................................................................................................................... 26 2 16 0.06 1 1 0 0
..................................................................ATTCCTGCTCGTCGCCTCGGTGCAA................................................................................................................................................................ 25 0 20 0.05 1 1 0 0
.....................................CGTCCTGCCTTCCCAGTCTCA................................................................................................................................................................................................. 21 0 20 0.05 1 1 0 0
.......................................................TCACCAGCTGGATTCCTGCTCGT............................................................................................................................................................................. 23 0 20 0.05 1 1 0 0
.............................................................................................................................................................GGCCACATCGCGGTAAACCGCAT....................................................................... 23 0 20 0.05 1 1 0 0
.....................................................................................................................................................GTTGCCCCGGCCACATCGCGGTAAACC........................................................................... 27 0 20 0.05 1 1 0 0
.........................................................................ATCGTCGCCTCGGTGCAAGTCC............................................................................................................................................................ 22 1 20 0.05 1 1 0 0
...................................................................................................GTTAGGTGTTCAACCGAGAAGAC................................................................................................................................. 23 0 20 0.05 1 0 0 1
.........................................................................CTCGTCGCCTCGGTGCAAGTCCTCCGGT...................................................................................................................................................... 28 0 20 0.05 1 1 0 0
........................................................................GCTCGTCGCCTCGGTGCAAGTCCTCA......................................................................................................................................................... 26 1 20 0.05 1 1 0 0
.........................................................................CTCGTCGCCTCGGGGCAAGTCC............................................................................................................................................................ 22 1 20 0.05 1 1 0 0
..........................................................................................................................................................GCCGGCCACATCGCGGTAAACC........................................................................... 22 1 20 0.05 1 1 0 0
................................CGGCCCGTCCTGCCTTCCCAGTCTC.................................................................................................................................................................................................. 25 0 20 0.05 1 1 0 0
.....................................................................CCTGCGCGTCGCCTCGGTGCAAGTCCT........................................................................................................................................................... 27 1 20 0.05 1 1 0 0
............................................................................................................................................................CGGCCACATCGCGGTAAACC........................................................................... 20 0 20 0.05 1 1 0 0
...................................................................................CGGTGCAAGTCCTCCGGTTAGGTG................................................................................................................................................ 24 0 20 0.05 1 1 0 0
.........................................CTGCCTTCCCAGTCTCACCAG............................................................................................................................................................................................. 21 0 20 0.05 1 1 0 0
..........................................................................CCGTCGCCTCGGTGCAAGTCCT........................................................................................................................................................... 22 1 20 0.05 1 1 0 0
............................................................................GTCGCCTGGGTCCAAGTCCT........................................................................................................................................................... 20 2 20 0.05 1 1 0 0
.......................................GCCTGCCTTCCCAGTCTCACCAGC............................................................................................................................................................................................ 24 1 20 0.05 1 0 1 0
...CCGAGGAGCCTTCCCACCAGC................................................................................................................................................................................................................................... 21 0 20 0.05 1 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_1123:3228-3478 + dpe_690 AGGGGCTCCTCGGAAGGGTGGTCGTTACAACCGCCGGGCAGGACGGAAGGGTCAGAGTGGTCGACCTAAGGACGAGCAGCGGAGCCACGTTCAGGAGGCCAATCCACAAGTTGGCTCTT--CTGCCAATG-----------GTTTGAAG-CCTT--CCAGTCCTTCAACGGGGCCGG--TGTAGCGCCA--T--------------------------------------------TTGGCGTATAAT-AATTGT----------------------TATTAGGAT-CG----T----------------ATTTTATG-------AAGTCTAGTGTAAGTTAGGCT-AGGG-CAAA-GCGGGAGCGCAA
dp5 Unknown_singleton_2911:1746-1996 - AGTGGCTCCTCGGAAGGGTGGTCGGAACAACCGCCGGGCAGGACGGAAGGGTCAGAGTGGTCGACCTAAGGACGAGCAGCGGAGCCACGTTCAGGAGGCCAATCCACAAGTTGGCGCTT--CTGCCAATG-----------GTTTGAAG-CCCT--CCAGGCCTTCAACGGGGCCGG--TGTAGCGCCA--T--------------------------------------------TTGGCTAATAAT-AATTGT----------------------TATTAGGAT-AG----T----------------AGTTCATG-------AAGTCTAGTGTAAGTTAGGCT-AGGG-CAAA-GCGGGAGCGCAA
droWil2 scf2_1100000004961:631240-631484 + AGTGGATGACGGCTCGAGTGGTAGCCACAAGCGTCGCGGCGGACGGCGCAATCAGGGTCGTCGACGTTAAAACGTCGGAAGG-GTCGACCTACAAAGAGCGATTCACAAATTGGCACCC--TTGCCGATT-----------TTTTGAAGGCCTT--ATAGCCCTCCAAGGAGGCCGG--TGTTAGCGCAG-A--------------------------------------------TGAGC-GCTAGT-G--TAT----------------------TGTTTGTGT-CG----------------------TCATTTA-------ATGTTTGATGTTG---AAGTTGGGGG-CGA-GCCGAGAGCGTGG
droVir3 scaffold_13324:755517-755765 - AGTGGCTCATCGGCAGATTATCGGCAGTGCACGCAGGAGAGGACAGCGTCGTTAAAGTGGCAGATATCAGGAAGACTAATGGCGGACAATTTAAAAGAG-CATCCACAAGTTGGCTCGG--CTGCCTGTG-----------GAGTGAAG-CTCC--CAATCGCTTCATGGTGGCCGG--TGCTGGTGCAG-A--------------------------------------------TTCGCGCAT--TGC-TTTA----------------------TAAAATGAATT--------------------T-AAAACATG-------AAGTCTAGTGTAAGTTAGGTTTAGGG-CGGA-GCGAGAGCGCA-
droMoj3 scaffold_6500:30722046-30722248 + AGTGGATAATGGGTCGCATTACAGCTACAATTCCTGGACGAGATCAACGAGTACGAGTGGTAGATGTCCGCACTACCAAAGG---CATAATCCGGAGACCAGTTCACAAAATAGCGATT--CTTCCTGTC-----------TCTTGAAA-GACT--G-CGTCATTCAATGGGGCCGGGATGTTGGGCCAA-A--------------------------------------------TTCACTTATCA--TATTGT----------------------T----------------------------------AACTTG-------AATTTTA------------------------------------T
droGri2 scaffold_3093:4180-4346 + AATGGAAGCTCGGCCGCATCGAATCACTTGTGCCTGGAAGGGATGGTCATGTTCGAGTTGTTCATCTTCGTACAGCCAATGGC---ATCTGCTGCCGACCATTACACAAATTGGCCATC--TTACCGATGGAGGCTTGATGTGTTGAAA-GCA----GATCCTTTCAAGGTGGCCGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13207:418-658 + AGTGGATCACCGCCAGGGTCGTCGAGACTCACGCCGGCGCGGACGGAAGGGTCAGGGTCGCCGACGTCAGGACGAGTAGAGGAGCATTGTTTCGGAGAGCAGTCCACAAGCTGGCAAGG--CTGCCAATA------------GTTGAAG-CCTAAGGAAGGCCTTCAACGGGGCCGG--TGTAGAATTAGATG--------------------------------------------T-A-----AAT-AATT---------AAGTGGA-----------------------------------------ATTGTATG-------AAGTCTAGTATAAGTTAGTTT-AGGG-CGGA-GCGGGAGCGCAA
droBip1 scf7180000395516:26032-26312 + AGGGGCTCACAGGAAGGGTAGGAGCAACGCACCCCCGCGCGGACGGAAGGGTCAGGGTCGCCGTCGTTAGGACTAGCAATGGAGCGAAGTGTAGAAGAGCAGTCGACAAGCTGGCGTGG--CTGCCAGTG-----------GGTTGAAG-CCGGATGGAAGCCTTCAACGGGGCCGA--TGTTAACGGA--TTGGATTGGATTTTATATTAATTTGAAGTTTTTGTAAATTTGA-----A-TTGTAA------------------TTGAATTGT---T---------A------------------------GTCTCT-------AAATCTATTCTAAGATAGCTT-AGGG-CGGA-GCGGGAGCGAAA
droKik1 scf7180000302339:7935-8161 + AGTGGCTCCTGGGAAGGATCGTCGCGACGCACGCAGGAGAGGACGGCATGGTCAGGGTCGTCGACCTTAGGAGAAGCGATGGAGCAGTGTTCCGGAGGGCCATCCACAAGCTGGCGCCG--CTGCCAGTG-----------TCTTGAAG-CCGT--GCAGGCGTTCAACGGGGCCGG--TGTTGTCTTA--ATTG--------------------------------------A-----GAC----------------------------------------TA----------------------------AATTTGTATTTTGTAGAAGAGTGTA----------AGGG-CGAAGGCGGGAGCACAA
droFic1 scf7180000453929:1272-1539 + AATGGCTGATAGGGAGGATCATCGCCACTCACGCAGGAGAGGACGGAATGGTCAGGGTCGTCGAAGTGAGGACCAGCGGAGGAGGAATTTTTAAGCGGGCCATCCATAAATTGGCGCCG--CTTCCAATA-----------TGTTGAAG-CCGG--ACGGGCCTTCAACGGGGCCGG--TGTTGGCTGA---------------------------------------------AGCCAGTTTTTCG----TTTT-TTATTT--TTGAA-TTGTTAGAATAAGTAT-CG----T----------------TGAATTTG-------AAGTTTACTGTAAGTTAGTTT-AGGG-CGAAGGCGGGAGCGCAA
droEle1 scf7180000487317:16085-16324 + AGTGGCTCCTGGGTCGAATCGTCGGGACTCACGCAGGGAAGGATGACATGGTCAGGGTCGTCGACG------------GTGGAGGAGTTTTTTGGCGGGCCATCCACAAGCTGGCGCCG--CTACCAGTG------------------G-CCTT--TCAGGCCTTTAACGGGGCCGG--TGTTGGCTCA--T-------------------------------------------TTCAGTTT--------TT---------TATTGAA-TTG-------------------A-CGTACCAATTGTTGAAGCTATTTG-------AAGTTTACTGTAAGTTAGCTT-AAAG-CTAAGGCGGGAGCACAA
droRho1 scf7180000762448:981-1227 + AATGGCTCCTCGGCAGAATAGTCGCCAGGCACGCAGGGGAGGACGGCATGGTCAGGGTCGTCGACGTGCGAACTAGTGGAGGAGGCCTTTTTCGGCGGGCCATTCATAAGTTGGCGCCG--CTTCCATTC-----------TGTTGAAG-CCCG--ATGGGTGTTCAACGGGGCCGG--TGTTCGCGCAA-A-------------------------------------TTTGA-----A-TTTTAA------------------TGAAATTGT---T---------A--------------------A-AAAACTTG-------AAGTTTAGTGTAAGTTAGTTT-AGGG-CGAAGGCGGGAGCACAA
droBia1 scf7180000301600:24048-24254 - AATTACTCCTGGCGAGAATCATCGCCAGACAAAC---------------------------------------AAGCGGAGTAGGAGTTTTTCGGTGGGCCATCCATATACTGGCGCCG--CTTCCTATA-----------GGTTGAAG-CCTT----AAGCGTTCAACGGTTCCGG--TGTTGGTTGA---------------------------------------------AACCATAAA-------ATTG----------TTGGA-TT---------CAGAC-C--------------------A-TAAATTTG-------AAGTTTAGTGTAAGTTAGTTT-AGGG-CAATGGCGGGTGCAAAA
droTak1 scf7180000410961:2734-2967 + AATGGCTCCTGGGGAGAATCATCGCCAGGCACGCAGGGGAGGACGGCATGGTCAGGGTCGTCGACGTTAGGACGGGCGCAGGAGGCGTTTTTCGGCGAGCCATCCATAAATTGGCGCCG--CTTCCCATT-----------TGTTGAAG-CCT----GAAGCGTTCAACGGGGCCGG--TGTTGCGAGA--TTTG--------------------------------------A-----ATT----------------------------------------TGTACT--------------------T-GAAGTTTG-------AAGTTTAGTGTAAGTTAGTTT-AGGA-CGAAGGCGGGTGCACAA
droEug1 scf7180000408752:8922-9134 + AGTGGAGAATCGGGCGCGTGGTGGCGGTGCACGTCGGCACTGACGGCAAGGGCCGAGTGGCGGACGTGAAGGCA-GCGGTGGGAACGTACCGGTGGAACGTATTCACAGATTGGCGCTT--TTATCTTTGCAA--------TCCTGAAG-GACG--TCGACCCTTCAGAGGGGGTGG--TGTTCATTCAA-T--------------------------------------------GTCCGGTCT--TTC---------------------------------------------------------------------------------AGTGTA----------AAGAGGGGA-GCGG-GGACCAA
dm3 chr2L:22350696-22350935 + AGTGGCTGCTGGGAATAGTCATCGCGACGCACGCACGTGACTACGGCATGGTT-------CTGACCCTAAAAGGAGCGACGGAGCAGTGTTTCG-TGAGCGATTCACAAGCTGGTGCCG--CTGTCAGTT-----------TGTTGAAG-CCGT--TGAGGCCATCAACGGGCCAGG--TTGAGGTTGAG-G----TTGGCTG------------------------------AAGTTGT-----AGT-GATT---------TATTGGT-TT----------------------TGTATGAAGTAC-AC-AACATTTT-------TAGTCTAGTGTAAGTTAGTTT-A--------------------A
droSim2 node_882:45-208 - AGTGGCTCCTGGGAAGGATCGTCGCGACGCACGCAGGAGAGGACGGCAAGGTCAGGGTCGTCGACCTTAGGAGGAGTGATGGAGCCATCTTCCGGAGGGCGATCCACAAGCTGGCGCCG--CTGCCGATT-----------TGTTGAAG-CCGT--GGAGGCGTTCAACGGGGCCGG--TGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_942:275-436 - GATGGCCTTTGGCGAGAGTCATGC---AGTTGGCAGAGACG--------------GGTTGCAGAATTGAGGACCGCGTCTGGA---GTAATAAGGCGGGCAGTGCACAAGCTGTGTCTGCTTCCCCTTGAGGA--C---TCTGTTGGAA-G-----CCAAGCTTCCAAGGGGGAGGA--TGTTGGGTCA--T--------------------------------------------GCAG--------------------------------------------------------------------------------------------------------------------------------C
droYak3 3L:16198286-16198550 + AGTGGCTCCTGGGAAGGATCGTCGCGACGCACGCAGGAGAGGACGGCAAGGTCAGGG-CGTCGACCTTAGGAGGAGTGATGGAGCCATCTTCCGGAGGGCGATCCACAAGCTGGCGCCG--CTGCCGATT-----------TGTTGAAG-CCGT--GGAGACGTTCAACGGAGCCGG--TGTTGGCGGA---------------------------------------------AAATATGAGTTCGGTTATTGT-TTATTG--TTGGA-TT-------------------------GTGAAGGAG-AA-AAAATCTG-------AAGTCTAGTGTAAGTTAGTTT-AGGG-CGAAGGCGGGAGCATAA
droEre2 scaffold_4929:22601029-22601293 + AGTGGCTGCTGGGAAAATTCGTCGCGACGCACGCAGGGGAGGACGGCA---------TCGTCGACCTTAGAAGGAGAGACGG-GCAGTTTTTCGGAGAGCGATCCACAAGCTGGCTCCG--CTGCCAATT-----------GGTTGAAG-CCGT--GGAGGCATTTAATGGGGACGG--TGTTAGCTGA---------------------------------------------ATCTATGTTATA-T-AGTTGTT------TATTGGT-TT-----------TTT-TGTCGA-TGTATGAACAAGGACAACATTTTA-------AAGTATAGTGTAAGTTAGTTT-AGTG-CGAAGGCGGGAGCATAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
AGGGGCTCCTCGGAAGGGTGGTCGTTACAACCGCCGGGCAGGACGGAAGGGTCAGAGTGGTCGACCTAAGGACGAGCAGCGGAGCCACGTTCAGGAGGCCAATCCACAAGTTGGCTCTT--CTGCCAATG-----------GTTTGAAG-CCTT--CCAGTCCTTCAACGGGGCCGG--TGTAGCGCCA--T--------------------------------------------TTGGCGTATAAT-AATTGT----------------------TATTAGGAT-CG----T----------------ATTTTATG-------AAGTCTAGTGTAAGTTAGGCT-AGGG-CAAA-GCGGGAGCGCAASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................................CAGGACGGAAGGGTCAGAGTGGTC...................................................................................................................................................................................................................................................................................................................24200.75150150000
.............................................................................................................................................................................................................................................................................................T-CG----T----------------ATTTTATG-------AAGTCTAGTGTA................................24200.153000003
..................................................................TAAGGACGAGCAGCGGAGC............................................................................................................................................................................................................................................................................................19200.153001002
..................................................................TAAGGACGAGCAGCGGAGT............................................................................................................................................................................................................................................................................................19200.102020000
....................................................................................................................................................................TCAACGGGGCCGG--TGTAGCGC......................................................................................................................................................................................21200.102000002
....................................................................................................................................................................................................................................................TAAT-AATTGT----------------------TATTAGGA....................................................................................18200.102020000
.................................................................................................................................................................CCTTCAACGGGGCCGG--TGTAGCGCCA--..................................................................................................................................................................................26200.102020000
.......................................AGGACGGAAGGGTCAGAGTGGTCG..................................................................................................................................................................................................................................................................................................................24200.051010000
......................................CAGGACGGAAGGGTCAGAGTGGA....................................................................................................................................................................................................................................................................................................................23200.051010000
...................................................................AAGGACGAGCAGCGGAGCA...........................................................................................................................................................................................................................................................................................19200.051010000
...........................................................................................................................................................................................................................................................................................................................ATG-------AAGTCTAGTGTAAGTTAGGC........................23200.051010000
.......................................................................................................................................................................................................................................................................................................................................GTCTAGTGTAAGTTAGGCT-AGGG-.................23200.051010000
......................................................................................ACGTTCAGGAGGCCAATCCAC......................................................................................................................................................................................................................................................................21200.051010000
..........................ACAACCGCCGGGCAGGACG....................................................................................................................................................................................................................................................................................................................................19200.051100000
..............................................................................................................................................................................................................................................................................................................................................GTAAGTTAGGCT-AGGG-CAAA-G...........21200.051010000
.......................................................................................................................................................................................................................................................................................................................TTTTATG-------AAGTCTAGTGT.................................18200.051010000
............................................................................................................................................................................................................................................................................................................................................GTGTAAGTTAGGCT-AGGG-CAAA-G...........23200.051000001
...........................................................................................................................................................................GGCCGG--TGTAGCGCCA--T--------------------------------------------TTGG.................................................................................................................................21200.051010000
......................................................................................ACGTTCAGGAGGCCAATCCACAAG...................................................................................................................................................................................................................................................................24200.051010000
......................................CAGGACGGAAGGGTCAGAGTGG.....................................................................................................................................................................................................................................................................................................................22200.051001000
...........................CAACCGCCGGGCAGGACGGAAGGGTC............................................................................................................................................................................................................................................................................................................................26200.051010000
.................................................................CTAAGGACGAGCAGCGGAGC............................................................................................................................................................................................................................................................................................20200.051000001
........................................................................................................................................................................................................................................................................................................................TTTATG-------AAGTCTAGTGTAAGT.............................21200.051010000
..................................................................TAAGGACGAGCAGCGGAGCCACG........................................................................................................................................................................................................................................................................................23200.051010000
.....................................GCAGGACGGAAGGGTCAGAGTGG.....................................................................................................................................................................................................................................................................................................................23200.051000001
......................................................................................................................................................................................................................................................................................................................................................GGCT-AGGG-CAAA-GCGGGAGCGC..22200.051010000
..................................................................TAAGGACGAGCAGCGGAG.............................................................................................................................................................................................................................................................................................18200.051010000
.........................................................................................TTCAGGAGGCCAATCCACAAGTTG................................................................................................................................................................................................................................................................24200.051010000
dp5
AGTGGCTCCTCGGAAGGGTGGTCGGAACAACCGCCGGGCAGGACGGAAGGGTCAGAGTGGTCGACCTAAGGACGAGCAGCGGAGCCACGTTCAGGAGGCCAATCCACAAGTTGGCGCTT--CTGCCAATG-----------GTTTGAAG-CCCT--CCAGGCCTTCAACGGGGCCGG--TGTAGCGCCA--T--------------------------------------------TTGGCTAATAAT-AATTGT----------------------TATTAGGAT-AG----T----------------AGTTCATG-------AAGTCTAGTGTAAGTTAGGCT-AGGG-CAAA-GCGGGAGCGCAASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.................GTGGTCGGAACAACCGCCGGGC..........................................................................................................................................................................................................................................................................................................................................221913.952650244601001220
.................GTGGTCGGAACAACCGCCGGGCA.........................................................................................................................................................................................................................................................................................................................................23199.37178117000000520
.....................................................AGAGTGGTCGACCTAAGGACGA......................................................................................................................................................................................................................................................................................................22137.239438410401100
......................................................................................ACGTTCAGGAGGCCAATCCACAAG...................................................................................................................................................................................................................................................................2446.252502000000500
.................GTGGTCGGAACAACCGCCGGG...........................................................................................................................................................................................................................................................................................................................................21205.60112010800000310
.....................................................AGAGTGGTCGACCTAAGGACGAG.....................................................................................................................................................................................................................................................................................................23135.086616500000000
.....................................................AGAGTGGTCGACCTAAGGACGAGC....................................................................................................................................................................................................................................................................................................24134.545905510003000
.................GTGGTCGGAACAACCGCCGGGCAG........................................................................................................................................................................................................................................................................................................................................24174.3574063000001010
......................................................................................ACGTTCAGGAGGCCAATCCACAAGT..................................................................................................................................................................................................................................................................2543.751501320000000
.................GTGGTCGGAACAACCGCCGG............................................................................................................................................................................................................................................................................................................................................20203.056106100000000
......................................................................................ACGTTCAGGAGGCCAATCCACA.....................................................................................................................................................................................................................................................................2272.862001900000010
...................................................TCAGAGTGGTCGACCTAAGGACGAGC....................................................................................................................................................................................................................................................................................................26122.6732014000011160
......................................................................................ACGTTCAGGAGGCCAATCCACAA....................................................................................................................................................................................................................................................................2372.431701700000000
.....................................................AGAGTGGTCGACCTAAGGACG.......................................................................................................................................................................................................................................................................................................21132.232902800100000
.................GTGGTCGGAACAACCGCCGGGCAGG.......................................................................................................................................................................................................................................................................................................................................25172.183703300000130
...................................................TCAGAGTGGTCGACCTAAGGACGAG.....................................................................................................................................................................................................................................................................................................25122.172601510100810
.........................................................TGGTCGACCTAAGGACGAGCAGCGG...............................................................................................................................................................................................................................................................................................25152.133205000002430
......................................................................................ACGTTCAGGAGGCCAATCCAC......................................................................................................................................................................................................................................................................2171.861301100000200
....................................................CAGAGTGGTCGACCTAAGGACGA......................................................................................................................................................................................................................................................................................................23131.692201400001700
...................................................TCAGAGTGGTCGACCTAAGGACGA......................................................................................................................................................................................................................................................................................................24121.501801110000600
..................TGGTCGGAACAACCGCCGGGC..........................................................................................................................................................................................................................................................................................................................................21191.472802800000000
.........................................................TGGTCGACCTAAGGACGAGCAGCGGA..............................................................................................................................................................................................................................................................................................26151.472200000001750
.........................................................TGGTCGACCTAAGGACGAGCAGCGGAG.............................................................................................................................................................................................................................................................................................27151.332000000001460
...........................................................GTCGACCTAAGGACGAGCAGCGG...............................................................................................................................................................................................................................................................................................23151.271901300000600
...........................................................................................................................................................................................................................................................TTGT----------------------TATTAGGAT-AG----T----------------AGTTCATG-------AAG.........................................2741.2550000000320
.................GTGGTCGGAACAACCGCCGGGT..........................................................................................................................................................................................................................................................................................................................................22201.252502300000200
.....................................................AGAGTGGTCGACCTAAGGACGAGCA...................................................................................................................................................................................................................................................................................................25121.171401110002000
......................................................................................ACGTTCAGGAGGCCAATCC........................................................................................................................................................................................................................................................................1981.1390810000000
...........................................................................................................................................................................GGCCGG--TGTAGCGCCA--T--------------------------------------------TTGG.................................................................................................................................2191.111001000000000
..................TGGTCGGAACAACCGCCGGGCA.........................................................................................................................................................................................................................................................................................................................................22191.112102100000000
......................................................GAGTGGTCGACCTAAGGACGAGC....................................................................................................................................................................................................................................................................................................23131.081401100000210
...................................................TCAGAGTGGTCGACCTAAGGACG.......................................................................................................................................................................................................................................................................................................23121.00120700000320
...........................................................GTCGACCTAAGGACGAGCAGCGGAG.............................................................................................................................................................................................................................................................................................25151.00150700000530
....................................................CAGAGTGGTCGACCTAAGGACGAG.....................................................................................................................................................................................................................................................................................................24131.00130900002200
..................TGGTCGGAACAACCGCCGGGCAGGACGG...................................................................................................................................................................................................................................................................................................................................28170.881500000003120
...........................................................GTCGACCTAAGGACGAGCAGCGGA..............................................................................................................................................................................................................................................................................................24150.871302000001010
......................................................................................ACGTTCAGGAGGCCAATCCA.......................................................................................................................................................................................................................................................................2070.8660600000000
......................................................GAGTGGTCGACCTAAGGACGAG.....................................................................................................................................................................................................................................................................................................22130.771001000000000
.......................................................................................CGTTCAGGAGGCCAATCCACAAGT..................................................................................................................................................................................................................................................................2440.7530300000000
.............................................................................................................................................................................................................................................................................................T-AG----T----------------AGTTCATG-------AAGTCTAGTG..................................2240.7530300000000
......................................................GAGTGGTCGACCTAAGGACGA......................................................................................................................................................................................................................................................................................................21130.6990900000000
....................................................CAGAGTGGTCGACCTAAGGACGAGC....................................................................................................................................................................................................................................................................................................25130.6990600000111
....................................................CAGAGTGGTCGACCTAAGGACG.......................................................................................................................................................................................................................................................................................................22130.6280700000100
..........................................................................................TCAGGAGGCCAATCCACAAGTTG................................................................................................................................................................................................................................................................2390.5650500000000
.....................................................AGAGTGGTCGACCTAAGGAC........................................................................................................................................................................................................................................................................................................20180.56100820000000
....................................................CAGAGTGGTCGACCTAAGGAC........................................................................................................................................................................................................................................................................................................21180.5090900000000
...........................................................................................................................GCCAATG-----------GTTTGAAG-CCCT--CC...................................................................................................................................................................................................................2120.5010100000000
.....................................................................................................................................................................................................................................................................................TATTAGGAT-AG----T----------------AGTTCATG-------AAGT........................................2440.5020100000010
..........................................................................................................................TGCCAATG-----------GTTTGAAG-CCCT--CCAGGCCT.............................................................................................................................................................................................................2820.5010100000000
......................................................................................ACGTTCAGGAGGCCAATCCACAAGTT.................................................................................................................................................................................................................................................................2640.5020200000000
.......................................................................................CGTTCAGGAGGCCAATCCACAAG...................................................................................................................................................................................................................................................................2340.5020200000000
.....................................................................................CACGTTCAGGAGGCCAATCCACAAGT..................................................................................................................................................................................................................................................................2640.5020200000000
..........................................................................................................................TGCCAATG-----------GTTTGAAG-CCCT--CCA..................................................................................................................................................................................................................2320.5010100000000
......................................................................................................................................................................................................................................................................................ATTAGGAT-AG----T----------------AGTTCATG-------............................................1940.5020000000020
....................................................................................................................................................................................................................................................................................................................................................TAGGCT-AGGG-CAAA-GCGGGAGCGC..24200.501000000000100
..............................................AAGGGTCAGAGTGGTCGACCTAAGG..........................................................................................................................................................................................................................................................................................................25170.4780800000000
..................TGGTCGGAACAACCGCCGGGCAGGACG....................................................................................................................................................................................................................................................................................................................................27170.4780000000260
..................TGGTCGGAACAACCGCCGGGCAG........................................................................................................................................................................................................................................................................................................................................23170.4780800000000
.................GTGGTCGGAACAACCGCCGGGCAGGAC.....................................................................................................................................................................................................................................................................................................................................27170.4780600000110
...........................................................GTCGACCTAAGGACGAGCAGCGGAGC............................................................................................................................................................................................................................................................................................26150.4770100000060
...............................................................................................................................................................................................................................................................................................................................................TAAGTTAGGCT-AGGG-CAAA-GCGGG.......24200.4590900000000
............................................................................................................................................................................GCCGG--TGTAGCGCCA--T--------------------------------------------TTGG.................................................................................................................................2090.4440400000000
.................GTGGTCGGAACAACCGCCGGGCAGGA......................................................................................................................................................................................................................................................................................................................................26170.4170700000000
...........................................................GTCGACCTAAGGACGAGCAGC.................................................................................................................................................................................................................................................................................................21150.4060600000000
..................TGGTCGGAACAACCGCCGGG...........................................................................................................................................................................................................................................................................................................................................20200.4080800000000
......................................................................................ACGTTCAGGAGGCCAATCCAA......................................................................................................................................................................................................................................................................2180.3830300000000
..................TGGTCGGAACAACCGCCGGGCAGG.......................................................................................................................................................................................................................................................................................................................................24170.3560600000000
..................................................................TAAGGACGAGCAGCGGAGCC...........................................................................................................................................................................................................................................................................................20200.3570000000250
...........................................................................................................................................................................GGCCGG--TGTAGCGCCA--T--------------------------------------------TTGGC................................................................................................................................2290.3330300000000
............................................................................................................................................................................................................................................TTGGCTAATAAT-AATTGT----------------------TATTA.......................................................................................23120.3340400000000
...........................................................................................................................................................................................................................................................................................................................................AGTGTAAGTTAGGCT-AGGG-C................20200.3060500001000
...............................................................................................................................................................................................................................................................................................................................................TAAGTTAGGCT-AGGG-CAAA-G...........20200.3060000000060
..................................................................TAAGGACGAGCAGCGGAGCCACGT.......................................................................................................................................................................................................................................................................................24200.3060000002040
.................GTGGTCGGAACAACCGCCG.............................................................................................................................................................................................................................................................................................................................................19200.3060600000000
.................GTGGTCGGAACAACCGCCGGGCAGGACGG...................................................................................................................................................................................................................................................................................................................................29170.2950000000140
........................................................................................................................................................................CGGGGCCGG--TGTAGCGCCA--T--------------------------------------------TTGG.................................................................................................................................2470.2920200000000
.....................................................AGAGTGGTCGACCTAAGGACGAGA....................................................................................................................................................................................................................................................................................................24140.2940400000000
..........................................................GGTCGACCTAAGGACGAGCAGC.................................................................................................................................................................................................................................................................................................22150.2740400000000
.........................................................TGGTCGACCTAAGGACGAGCAGC.................................................................................................................................................................................................................................................................................................23150.2740400000000
....................................................................................................................................................................................................................................................TAAT-AATTGT----------------------TATTAGGAT-AG----T----------------AGT........................................................2540.2510100000000
........................................................................................GTTCAGGAGGCCAATCCACAAGT..................................................................................................................................................................................................................................................................2340.2510100000000
.............................................................................................................................................................................................................................................................................................T-AG----T----------------AGTTCATG-------AAGTCTAG....................................2040.2510100000000
......................................................................................ACGTTCAGGAGGCCAATCCACAAGC..................................................................................................................................................................................................................................................................2540.2510100000000
........................................................................................................................................................................................................................................................................................TAGGAT-AG----T----------------AGTTCATG-------AAGTCTAG....................................2540.2510100000000
...........................................................................................................................................................................................CA--T--------------------------------------------TTGGCTAATAAT-AATTGT----------------------TA..........................................................................................23120.2530300000000
...........................................................................................................................................................................................CA--T--------------------------------------------TTGGCTAATAAT-AATTGT----------------------TAT.........................................................................................24120.2530300000000
....................................................................AGGACGAGCAGCGGAGCCACGTT......................................................................................................................................................................................................................................................................................23200.2550500000000
........................................................................................GTTCAGGAGGCCAATCCACAAG...................................................................................................................................................................................................................................................................2240.2510100000000
............................................................................................................................................................................................................................................TTGGCTAATAAT-AATTGT----------------------TAT.........................................................................................21120.2530300000000
..............................................AAGGGTCAGAGTGGTCGACCTA.............................................................................................................................................................................................................................................................................................................22170.2440400000000
..............................................AAGGGTCAGAGTGGTCGACCTAAGGA.........................................................................................................................................................................................................................................................................................................26170.2440400000000
...................................................TCAGAGTGGTCGACCTAAGGAC........................................................................................................................................................................................................................................................................................................22170.2440400000000
.....................................................AGAGTGGTCGACCTAAGGACGT......................................................................................................................................................................................................................................................................................................22130.2330300000000
...................GGTCGGAACAACCGCCGGGC..........................................................................................................................................................................................................................................................................................................................................20190.2140400000000
............................................................TCGACCTAAGGACGAGCAGC.................................................................................................................................................................................................................................................................................................20150.2030300000000
.........................................................TGGTCGACCTAAGGACGAGCAGCGGAGC............................................................................................................................................................................................................................................................................................28150.2030000000300
.........................................................TGGTCGACCTAAGGACGAGCAGCG................................................................................................................................................................................................................................................................................................24150.2030000000300
............................................................TCGACCTAAGGACGAGCAGCGGAG.............................................................................................................................................................................................................................................................................................24150.2030200000100
..................TGGTCGGAACAACCGCCGG............................................................................................................................................................................................................................................................................................................................................19200.2040400000000
...........................................................................................................................................................................GGCCGG--TGTAGCGCCA--T--------------------------------------------TTGGCT...............................................................................................................................2350.2010100000000
...................................................................................................................................................................................................................................................................................................................................................TTAGGCT-AGGG-CAAA-GCGGGAGCGC..25200.2040000000400
.................GTGGTCGGAACAACCGCCGGGA..........................................................................................................................................................................................................................................................................................................................................22200.2040400000000
.........................................................TGGTCGACCTAAGGACGAGCAGCGGAA.............................................................................................................................................................................................................................................................................................27150.2030000000120
..........................................................................................................................................................................................................................................................................................................................................TAGTGTAAGTTAGGCT-AGGG-C................21200.2040000000040
.....................TCGGAACAACCGCCGGGCAGGACGGAAA................................................................................................................................................................................................................................................................................................................................28150.2030000000300
.........................................................TGGTCGACCTAAGGACGAGCAAA.................................................................................................................................................................................................................................................................................................23160.1930000000300
.....................................................AGAGTGGTCGACCTAAGGACGAGCAGC.................................................................................................................................................................................................................................................................................................27110.1820100001000
............................................................................................................................................................................................................................................TTGGCTAATAAT-AATTGT----------------------TATTAGGA....................................................................................26110.1820200000000
................................................GGGTCAGAGTGGTCGACCTAAGGA.........................................................................................................................................................................................................................................................................................................24170.1830000000300
..............................................AAGGGTCAGAGTGGTCGAC................................................................................................................................................................................................................................................................................................................19170.1830300000000
..............................................AAGGGTCAGAGTGGTCGACC...............................................................................................................................................................................................................................................................................................................20170.1830300000000
...................................................................................................CAATCCACAAGTTGGCGCTT--CTG.....................................................................................................................................................................................................................................................2360.1710100000000
....................................................................................................................................................................TCAACGGGGCCGG--TGTAGCGCCA--T--------------------------------------------T....................................................................................................................................25180.1730300000000
...................................................................................................................................................................TTCAACGGGGCCGG--TGTAGCGCCA--T--------------------------------------------T....................................................................................................................................26180.1730300000000
..................................................................................................CCAATCCACAAGTTGGCGCTT--CTG.....................................................................................................................................................................................................................................................2460.1710010000000
...........................................................GTCGACCTAAGGACGAGCAGCGGAGCC...........................................................................................................................................................................................................................................................................................27120.1720200000000
...................................................TCAGAGTGGTCGACCTAAGGACGT......................................................................................................................................................................................................................................................................................................24120.1720110000000
.................GTGGTCGGAACAACCGCCGGGCAC........................................................................................................................................................................................................................................................................................................................................24190.1630300000000
...................GGTCGGAACAACCGCCGGGCA.........................................................................................................................................................................................................................................................................................................................................21190.1630300000000
......................................................GAGTGGTCGACCTAAGGACG.......................................................................................................................................................................................................................................................................................................20130.1520200000000
.....................................................AGAGTGGTCGACCTAAGGACGG......................................................................................................................................................................................................................................................................................................22130.1520200000000
.................................................................................................................................................................................................................................................................................................................................................AGTTAGGCT-AGGG-CAAA-GCGGG.......22200.1530300000000
...........................................................................................................................................................................................................................................................................................................................ATG-------AAGTCTAGTGTAAGTTAGGC........................23200.1530300000000
..................................................................TAAGGACGAGCAGCGGAGC............................................................................................................................................................................................................................................................................................19200.1530200000010
..............................................AAGGGTCAGAGTGGTCGA.................................................................................................................................................................................................................................................................................................................18200.1530200000010
.......................................................................................CGTTCAGGAGGCCAATCCACAA....................................................................................................................................................................................................................................................................2270.1410100000000
......................................................................................ACGTTCAGGAGGCCAATCCACAG....................................................................................................................................................................................................................................................................2370.1410100000000
......................................................................................................TCCACAAGTTGGCGCTT--CTG.....................................................................................................................................................................................................................................................2070.1410100000000
....................................................................................CCACGTTCAGGAGGCCAATCCA.......................................................................................................................................................................................................................................................................2270.1410100000000
...................................................TCAGAGTGGTCGACCTAAGGACGAAA....................................................................................................................................................................................................................................................................................................26140.1420200000000
........................................................................................GTTCAGGAGGCCAATCCACAA....................................................................................................................................................................................................................................................................2170.1410100000000
.......................................................................................................................................................................ACGGGGCCGG--TGTAGCGCCA--T--------------------------------------------TTGG.................................................................................................................................2570.1410100000000
.......................................................................................CGTTCAGGAGGCCAATCCA.......................................................................................................................................................................................................................................................................1970.1410100000000
.....................................................AGAGTGGTCGACCTAAGGACGAAA....................................................................................................................................................................................................................................................................................................24150.1320110000000
............................................GGAAGGGTCAGAGTGGTCGACC...............................................................................................................................................................................................................................................................................................................22150.1320200000000
............................................GGAAGGGTCAGAGTGGTCGACA...............................................................................................................................................................................................................................................................................................................22150.1320000000200
.............................................................CGACCTAAGGACGAGCAGCGG...............................................................................................................................................................................................................................................................................................21150.1320100000010
.....................TCGGAACAACCGCCGGGCAGGACGGA..................................................................................................................................................................................................................................................................................................................................26150.1320000000020
...........................................................GTCGACCTAAGGACGAGCAGCG................................................................................................................................................................................................................................................................................................22150.1320200000000
............................................GGAAGGGTCAGAGTGGTCGAC................................................................................................................................................................................................................................................................................................................21150.1320100000100
............................................................TCGACCTAAGGACGAGCAGCGGAGC............................................................................................................................................................................................................................................................................................25150.1320000000110
.........................................................TGGTCGACCTAAGGACGAGCAG..................................................................................................................................................................................................................................................................................................22150.1320200000000
..........................................................GGTCGACCTAAGGACGAGCAGCGGA..............................................................................................................................................................................................................................................................................................25150.1320000000200
..........................................................................................TCAGGAGGCCAATCCACAAGTTGG...............................................................................................................................................................................................................................................................2480.1310100000000
......................................................................................ACGTTCAGGAGGCCAATC.........................................................................................................................................................................................................................................................................1880.1310100000000
..................................................................................AGCCACGTTCAGGAGGCCAATCC........................................................................................................................................................................................................................................................................2380.1310100000000
...........................................................................................CAGGAGGCCAATCCACAAGTTGGC..............................................................................................................................................................................................................................................................2480.1310000000100
...................................................TCAGAGTGGTCGACCTAAGG..........................................................................................................................................................................................................................................................................................................20170.1220010100000
...........................................................GTCGACCTAAGGACGAGC....................................................................................................................................................................................................................................................................................................18170.1220200000000
..................TGGTCGGAACAACCGCCGGGCAGGA......................................................................................................................................................................................................................................................................................................................................25170.1220200000000
...................................................TCAGAGTGGTCGACCTAAGGA.........................................................................................................................................................................................................................................................................................................21170.1220100000100
..............................................AAGGGTCAGAGTGGTCGACAA..............................................................................................................................................................................................................................................................................................................21170.1220200000000
..............................................AAGGGTCAGAGTGGTCGACCTAA............................................................................................................................................................................................................................................................................................................23170.1220100000100
..................TGGTCGGAACAACCGCCGGGCAGGACA....................................................................................................................................................................................................................................................................................................................................27170.1220200000000
.....................TCGGAACAACCGCCGGGCAGGACG....................................................................................................................................................................................................................................................................................................................................24170.1220110000000
...GGCTCCTCGGAAGGGTGGTCG.........................................................................................................................................................................................................................................................................................................................................................21170.1220200000000
....................................................CAGAGTGGTCGACCTAAGGA.........................................................................................................................................................................................................................................................................................................20180.1120200000000
.....................................................AGAGTGGTCGACCTAAGG..........................................................................................................................................................................................................................................................................................................18180.1120200000000
.....................................................AGAGTGGTCGACCTAAGGA.........................................................................................................................................................................................................................................................................................................19180.1120200000000
........................GAACAACCGCCGGGCAGGACG....................................................................................................................................................................................................................................................................................................................................21190.1120200000000
................GGTGGTCGGAACAACCGCCGGGC..........................................................................................................................................................................................................................................................................................................................................23190.1120200000000
............................................................................................................................................................................................................................................................................................................................TG-------AAGTCTAGTGTAAGTTAGGCT-AGG...................26200.1020000000020
...................................................................................................................................................................TTCAACGGGGCCGG--TGTAGCGC......................................................................................................................................................................................22200.1020100001000
....................................................................................................................................................................TCAACGGGGCCGG--TGTAGCGC......................................................................................................................................................................................21200.1020000000200
........................................................................................................................................................................................................................................................................................................................................TCTAGTGTAAGTTAGGCT-AGGG-CA...............24200.1020200000000
........................................................................................................................................................................................................................................................................................................................................TCTAGTGTAAGTTAGGCT-AG....................20200.1020200000000
........................................................................................................................................................................................................................................................................................................................................TCTAGTGTAAGTTAGGCT-A.....................19200.1020200000000
..................................................................TAAGGACGAGCAGCGGAGCCACG........................................................................................................................................................................................................................................................................................23200.1020000000200
..........................................ACGGAAGGGTCAGAGTGGTC...................................................................................................................................................................................................................................................................................................................20200.1020100100000
.................GTGGTCGGAACAACCGCC..............................................................................................................................................................................................................................................................................................................................................18200.1020200000000
..........................................................................AGCAGCGGAGCCACGTTCAGGAGG...............................................................................................................................................................................................................................................................................24200.1020200000000
.................GTGGTCGGAACAACCGCCGGGAC.........................................................................................................................................................................................................................................................................................................................................23200.1020200000000
.................................................................................GAGCCACGTTCAGGAGGCCA............................................................................................................................................................................................................................................................................20100.1010100000000
....................................................................................................................................................................TCAACGGGGCCGG--TGTAG.........................................................................................................................................................................................18200.1020100000100
.....................................GCAGGACGGAAGGGTCAGAGTGG.....................................................................................................................................................................................................................................................................................................................23200.1020200000000
.................................................................CTAAGGACGAGCAGCGGAGCC...........................................................................................................................................................................................................................................................................................21200.1020110000000
.................................................................CTAAGGACGAGCAGCGGAGC............................................................................................................................................................................................................................................................................................20200.1021000000010
...................................................................................................................................................................TTCAACGGGGCCGG--TGTAGA........................................................................................................................................................................................20200.1020000000200
.........................................................................................................................................................................................................................................................................................................................TCATG-------AAGTCTAGTGTAAGTTA...........................22200.1020000000020
....................................................................................................................................................................................................................................................TAAT-AATTGT----------------------TATTAGGAT-AG----T----------------A..........................................................23200.1020000000020
.................................................................CTAAGGACGAGCAGCGGAG.............................................................................................................................................................................................................................................................................................19200.1020000000020
....................................................CAGAGTGGTCGACCTAAGGACGAGCAG..................................................................................................................................................................................................................................................................................................27110.0910100000000
...................................................TCAGAGTGGTCGACCTAAGGACGAGCA...................................................................................................................................................................................................................................................................................................27110.0910100000000
.........................................................................................TTCAGGAGGCCAATCCACAA....................................................................................................................................................................................................................................................................20110.0910100000000
.............................................................................................................................................................................................................................................TGGCTAATAAT-AATTGT----------------------TATTAG......................................................................................23110.0910100000000
......................................................GAGTGGTCGACCTAAGGACGAGCAG..................................................................................................................................................................................................................................................................................................25110.0910000000010
.....................................................AGAGTGGTCGACCTAAGGACGAGCAG..................................................................................................................................................................................................................................................................................................26110.0910100000000
............................................................................................................................................................................................A--T--------------------------------------------TTGGCTAATAAT-AATTGT----------------------TATT........................................................................................24120.0810100000000
............................................................................................................................................................................................A--T--------------------------------------------TTGGCTAATAAT-AATTGT----------------------TA..........................................................................................22120.0810100000000
.....................................................AGAGTGGTCGACCTAAGGACGAGCAA..................................................................................................................................................................................................................................................................................................26120.0810100000000
...............................................................ACCTAAGGACGAGCAGCGGAGCCA..........................................................................................................................................................................................................................................................................................24120.0810100000000
..........................................................................................TCAGGAGGCCAATCCACAA....................................................................................................................................................................................................................................................................19120.0810100000000
......................................................GAGTGGTCGACCTAAGGACGAGCA...................................................................................................................................................................................................................................................................................................24120.0810100000000
............................................................TCGACCTAAGGACGAGCAGCGGAGCC...........................................................................................................................................................................................................................................................................................26120.0810100000000
...........................................................................................................................................................................................CA--T--------------------------------------------TTGGCTAATAAT-AATTGT----------------------TATTA.......................................................................................26120.0810100000000
............................................................................................................................................................................................A--T--------------------------------------------TTGGCTAATAAT-AATTGT----------------------TAT.........................................................................................23120.0810100000000
.......................................................AGTGGTCGACCTAAGGACGA......................................................................................................................................................................................................................................................................................................20130.0810100000000
.....................................................AGAGTGGTCGACCTAAGGACGC......................................................................................................................................................................................................................................................................................................22130.0810000100000
...........................................................................................................................................................................................CA--T--------------------------------------------TTGGCTAATAAT-AATTG...................................................................................................................20130.0810000000100
.......................................................AGTGGTCGACCTAAGGACGAG.....................................................................................................................................................................................................................................................................................................21130.0810100000000
....................................................CAGAGTGGTCGACCTAAGGACGT......................................................................................................................................................................................................................................................................................................23130.0810100000000
.....................................................AGAGTGGTCGACCTAAGGACGAA.....................................................................................................................................................................................................................................................................................................23140.0710100000000
...........................................................GTCGACCTAAGGACGAGCAGCGGAA.............................................................................................................................................................................................................................................................................................25150.0710000000100
............................................................TCGACCTAAGGACGAGCAGCGGA..............................................................................................................................................................................................................................................................................................23150.0710000000100
................................................................CCTAAGGACGAGCAGCGGAG.............................................................................................................................................................................................................................................................................................20150.0710000000100
...........................................................GTCGACCTAAGGACGAGCAG..................................................................................................................................................................................................................................................................................................20150.0710000100000
.........................................................TGGTCGACCTAAGGACGAGCAGCGT...............................................................................................................................................................................................................................................................................................25150.0710100000000
.............................................................CGACCTAAGGACGAGCAGCGGA..............................................................................................................................................................................................................................................................................................22150.0710000000100
............................................GGAAGGGTCAGAGTGGTCGACCTAAG...........................................................................................................................................................................................................................................................................................................26150.0710100000000
..........................................................GGTCGACCTAAGGACGAGCAG..................................................................................................................................................................................................................................................................................................21150.0710100000000
............................................................TCGACCTAAGGACGAGCAGCGG...............................................................................................................................................................................................................................................................................................22150.0710000000100
.............................................................CGACCTAAGGACGAGCAGCGGAG.............................................................................................................................................................................................................................................................................................23150.0710000000010
.........................................................TGGTCGACCTAAGGACGAGCAGCGGTC.............................................................................................................................................................................................................................................................................................27150.0710010000000
.........................................................TGGTCGACCTAAGGACGAGCAGCGA...............................................................................................................................................................................................................................................................................................25150.0710100000000
............................................................TCGACCTAAGGACGAGCAG..................................................................................................................................................................................................................................................................................................19150.0710100000000
................................................................CCTAAGGACGAGCAGCGGAGC............................................................................................................................................................................................................................................................................................21150.0710100000000
.....................TCGGAACAACCGCCGGGCAGGACGGAA.................................................................................................................................................................................................................................................................................................................................27150.0710000000100
.........................................................TGGTCGACCTAAGGACGAGCAGA.................................................................................................................................................................................................................................................................................................23150.0710100000000
........................................................................................................CACAAGTTGGCGCTT--CTGCC...................................................................................................................................................................................................................................................20160.0610100000000
..........................................................GGTCGACCTAAGGACGAGCAA..................................................................................................................................................................................................................................................................................................21160.0610100000000
.........................................................TGGTCGACCTAAGGACGAGCA...................................................................................................................................................................................................................................................................................................21160.0610100000000
..................................................................................................................................................................CTTCAACGGGGCCGG--TGTAGCGCCA--T--------------------------------------------T....................................................................................................................................27160.0610100000000
........................................................GTGGTCGACCTAAGGACGAGC....................................................................................................................................................................................................................................................................................................21160.0610100000000
...........................................................GTCGACCTAAGGACGAGCA...................................................................................................................................................................................................................................................................................................19160.0610100000000
....................GTCGGAACAACCGCCGGGCAGGACG....................................................................................................................................................................................................................................................................................................................................25170.0610100000000
...GGCTCCTCGGAAGGGTGGT...........................................................................................................................................................................................................................................................................................................................................................19170.0610100000000
droWil2
AGTGGATGACGGCTCGAGTGGTAGCCACAAGCGTCGCGGCGGACGGCGCAATCAGGGTCGTCGACGTTAAAACGTCGGAAGG-GTCGACCTACAAAGAGCGATTCACAAATTGGCACCC--TTGCCGATT-----------TTTTGAAGGCCTT--ATAGCCCTCCAAGGAGGCCGG--TGTTAGCGCAG-A--------------------------------------------TGAGC-GCTAGT-G--TAT----------------------TGTTTGTGT-CG----------------------TCATTTA-------ATGTTTGATGTTG---AAGTTGGGGG-CGA-GCCGAGAGCGTGGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
AGTGGCTCATCGGCAGATTATCGGCAGTGCACGCAGGAGAGGACAGCGTCGTTAAAGTGGCAGATATCAGGAAGACTAATGGCGGACAATTTAAAAGAG-CATCCACAAGTTGGCTCGG--CTGCCTGTG-----------GAGTGAAG-CTCC--CAATCGCTTCATGGTGGCCGG--TGCTGGTGCAG-A--------------------------------------------TTCGCGCAT--TGC-TTTA----------------------TAAAATGAATT--------------------T-AAAACATG-------AAGTCTAGTGTAAGTTAGGTTTAGGG-CGGA-GCGAGAGCGCA-SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....................................................................................................ATCCACAAGTTGGCTCGG--CTG.....................................................................................................................................................................................................................................................2111.001100000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................T--------------------T-AAAACATG-------AAGTCTAGTGT.................................2111.001000000000000000000000000100000000000000000000000000000000000000
.................................................................................................................GCTCGG--CTGCCTGTG-----------GAGTGA..............................................................................................................................................................................................................................2111.001000000000000000000000000010000000000000000000000000000000000000
.......................................................................................................CCACAAGTTGGCTCGG--CTGCC...................................................................................................................................................................................................................................................2111.001000000001000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................ATCGCTTCATGGTGGCCGG--..............................................................................................................................................................................................1911.001000000000000000000000000000010000000000000000000000000000000000
..............................................................................................AAGAG-CATCCACAAGTTGGCT.............................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000001000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................TTAGGG-CGGA-GCGAGAGCGC..2020.501000000001000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................GGTTTAGGG-CGGA-GCGAGA......1930.331000000000000000100000000000000000000000000000000000000000000000
droMoj3
AGTGGATAATGGGTCGCATTACAGCTACAATTCCTGGACGAGATCAACGAGTACGAGTGGTAGATGTCCGCACTACCAAAGG---CATAATCCGGAGACCAGTTCACAAAATAGCGATT--CTTCCTGTC-----------TCTTGAAA-GACT--G-CGTCATTCAATGGGGCCGGGATGTTGGGCCAA-A--------------------------------------------TTCACTTATCA--TATTGT----------------------T----------------------------------AACTTG-------AATTTTA------------------------------------TSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...........................................TCAACGAGTACGAGTGGTAGATG...............................................................................................................................................................................................................................................................................................................2353.00151500000
...........................................TCAACGAGTACGAGTGGTAGATGT..............................................................................................................................................................................................................................................................................................................2451.608500021
...........................................TCAACGAGTACGAGTGGTAGATGTC.............................................................................................................................................................................................................................................................................................................2551.608700001
...........................................TCAACGAGTACGAGTGGTAGATGTCC............................................................................................................................................................................................................................................................................................................2651.407700000
....................................................................................................AGTTCACAAAATAGCGATT--CTTCC...................................................................................................................................................................................................................................................2460.835300020
...........................................TCAACGAGTACGAGTGGTAGAT................................................................................................................................................................................................................................................................................................................2250.603300000
....................................................................................................AGTTCACAAAATAGCGATT--CTTCCT..................................................................................................................................................................................................................................................2560.503300000
....................................................................................................AGTTCACAAAATAGCGATT--CTTC....................................................................................................................................................................................................................................................2360.503300000
..................................................................................................CCAGTTCACAAAATAGCGATT--CTTCCT..................................................................................................................................................................................................................................................2750.402200000
...................................................................................................CAGTTCACAAAATAGCGATT--CTTCC...................................................................................................................................................................................................................................................2550.402200000
...........................................TCAACGAGTACGAGTGGTAGA.................................................................................................................................................................................................................................................................................................................2150.402200000
....................................................................................................AGTTCACAAAATAGCGATT--CTTCCTGC................................................................................................................................................................................................................................................2760.332200000
....................................................................................................AGTTCACAAAATAGCGATT--CTTCCTGTC-----------....................................................................................................................................................................................................................................2860.332200000
....................................................................................................AGTTCACAAAATAGCGATT--CTTCCTG.................................................................................................................................................................................................................................................2660.332200000
.............................................AACGAGTACGAGTGGTAGATGTCC............................................................................................................................................................................................................................................................................................................2450.201100000
.............................................................................................................................................................................................A-A--------------------------------------------TTCACTTATCA--TATTGT----------------------T----------------------------------AACTTG-------A...........................................2750.201100000
............................................CAACGAGTACGAGTGGTAGATG...............................................................................................................................................................................................................................................................................................................2250.201100000
............................................CAACGAGTACGAGTGGTAGATGT..............................................................................................................................................................................................................................................................................................................2350.201100000
............................................CAACGAGTACGAGTGGTAGAT................................................................................................................................................................................................................................................................................................................2150.201100000
..................................................................................................CCAGTTCACAAAATAGCGATT--CTTCC...................................................................................................................................................................................................................................................2650.201100000
...........................................TCAACGAGTACGAGTGGTAGATC...............................................................................................................................................................................................................................................................................................................2350.201000001
...............................................................................................................................................................................................................................................ACTTATCA--TATTGT----------------------T----------------------------------AACTTG-------AATT........................................2550.201100000
...............................................CGAGTACGAGTGGTAGATGT..............................................................................................................................................................................................................................................................................................................2050.201100000
...............................................................................................................................................................................................................................................ACTTATCA--TATTGT----------------------T----------------------------------AACTTG-------AAT.........................................2450.201100000
....................................................................................................AGTTCACAAAATAGCGATT--CTTCCTGT................................................................................................................................................................................................................................................2760.171100000
.............TCGCATTACAGCTACAATTCCTGGAC..........................................................................................................................................................................................................................................................................................................................................2660.171100000
..TGGATAATGGGTCGCATTACAGCTACAAT..................................................................................................................................................................................................................................................................................................................................................2960.171100000
.................................CTGGACGAGATCAACGAGTACG..........................................................................................................................................................................................................................................................................................................................2270.141100000
.......................................................................................................TCACAAAATAGCGATT--CTTCCTG.................................................................................................................................................................................................................................................2370.141100000
...............................TCCTGGACGAGATCAACGAGTACGAG........................................................................................................................................................................................................................................................................................................................2670.141100000
droGri2
AATGGAAGCTCGGCCGCATCGAATCACTTGTGCCTGGAAGGGATGGTCATGTTCGAGTTGTTCATCTTCGTACAGCCAATGGC---ATCTGCTGCCGACCATTACACAAATTGGCCATC--TTACCGATGGAGGCTTGATGTGTTGAAA-GCA----GATCCTTTCAAGGTGGCCGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...........................................................................................................................................TGTGTTGAAA-GCA----GATCCTTTCAA.........................................................................................................................................................................................................24200.05110
droAna3
AGTGGATCACCGCCAGGGTCGTCGAGACTCACGCCGGCGCGGACGGAAGGGTCAGGGTCGCCGACGTCAGGACGAGTAGAGGAGCATTGTTTCGGAGAGCAGTCCACAAGCTGGCAAGG--CTGCCAATA------------GTTGAAG-CCTAAGGAAGGCCTTCAACGGGGCCGG--TGTAGAATTAGATG--------------------------------------------T-A-----AAT-AATT---------AAGTGGA-----------------------------------------ATTGTATG-------AAGTCTAGTATAAGTTAGTTT-AGGG-CGGA-GCGGGAGCGCAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..............................................................GACGTCAGGACGAGTAGAGGAGC............................................................................................................................................................................................................................................................................................23201.45292800001
.............................................................................................................................CAATA------------GTTGAAG-CCTAAGGAAGGC...............................................................................................................................................................................................................24200.85175111000
.........................................................................GAGTAGAGGAGCATTGTTTCGGAGA...............................................................................................................................................................................................................................................................................25200.70141130000
.........................................................................GAGTAGAGGAGCATTGTTTCGGAG................................................................................................................................................................................................................................................................................24200.70141300100
.........................................................................GAGTAGAGGAGCATTGTTTCGGA.................................................................................................................................................................................................................................................................................23200.5511720020
.........................................................................GAGTAGAGGAGCATTGTTTCGGAGAGC.............................................................................................................................................................................................................................................................................27200.5010820000
..............................................................GACGTCAGGACGAGTAGAGGAGCAT..........................................................................................................................................................................................................................................................................................25200.459810000
.................................................................GTCAGGACGAGTAGAGGAGCATTG........................................................................................................................................................................................................................................................................................24200.408800000
......................CGAGACTCACGCCGGCGCGGA......................................................................................................................................................................................................................................................................................................................................21200.357070000
...............GGGTCGTCGAGACTCACGCCGG............................................................................................................................................................................................................................................................................................................................................22200.306600000
.............................................................................................................................................................................................................................................................................................................................................TATAAGTTAGTTT-AGGG-CGGA-GCGG........25200.255500000
.....................TCGAGACTCACGCCGGCGCGGACGGA..................................................................................................................................................................................................................................................................................................................................26200.255500000
.........................................................................GAGTAGAGGAGCATTGTTTCG...................................................................................................................................................................................................................................................................................21200.255500000
.............................................................................................................................CAATA------------GTTGAAG-CCTAAGGAAGGCCTT............................................................................................................................................................................................................27200.255500000
..............................................................GACGTCAGGACGAGTAGAGGAGCA...........................................................................................................................................................................................................................................................................................24200.204040000
..........................................................................................................................TGCCAATA------------GTTGAAG-CCTAAGGAAGGCC..............................................................................................................................................................................................................28200.153120000
..............................................AAGGGTCAGGGTCGCCGACGTCAG...........................................................................................................................................................................................................................................................................................................24200.153300000
........................................................................................................................................................................................................................................................................................................................................TCTAGTATAAGTTAGTTT-AGGG-C................23200.153300000
................................................................................................GAGCAGTCCACAAGCTGGCAAGG--........................................................................................................................................................................................................................................................23200.153201000
.........................GACTCACGCCGGCGCGGACGG...................................................................................................................................................................................................................................................................................................................................21200.102200000
........................AGACTCACGCCGGCGCGGACGGAA.................................................................................................................................................................................................................................................................................................................................24200.102200000
...........................................................................................TCGGAGAGCAGTCCACAAGCTGGC..............................................................................................................................................................................................................................................................24200.102200000
...............................................AGGGTCAGGGTCGCCGACGTCA............................................................................................................................................................................................................................................................................................................22200.102200000
.................................................................GTCAGGACGAGTAGAGGAGCA...........................................................................................................................................................................................................................................................................................21200.102200000
............................................................................TAGAGGAGCATTGTTTCGGAGAGC.............................................................................................................................................................................................................................................................................24200.102011000
.................................................................GTCAGGACGAGTAGAGGAGC............................................................................................................................................................................................................................................................................................20200.102200000
..................TCGTCGAGACTCACGCCGGCGCGGA......................................................................................................................................................................................................................................................................................................................................25200.102200000
.........................GACTCACGCCGGCGCGGACGGA..................................................................................................................................................................................................................................................................................................................................22200.102200000
................................................................................................GAGCAGTCCACAAGCTGGCAAG...........................................................................................................................................................................................................................................................22200.102200000
.......................GAGACTCACGCCGGCGCGGA......................................................................................................................................................................................................................................................................................................................................20200.102200000
.........................................................................GAGTAGAGGAGCATTGTTTCGG..................................................................................................................................................................................................................................................................................22200.102002000
..................TCGTCGAGACTCACGCCGGCGCGGAC.....................................................................................................................................................................................................................................................................................................................................26200.102200000
............................................................................................................................................................................................................................................................................................................................TG-------AAGTCTAGTATAAGTTAGTTT-AGG...................26200.051000010
.........................................................................................TTTCGGAGAGCAGTCCACAAGC..................................................................................................................................................................................................................................................................22200.051010000
.............................................................................................................................CAATA------------GTTGAAG-CCTAAGG....................................................................................................................................................................................................................19200.051001000
..................................................................TCAGGACGAGTAGAGGAGCATTG........................................................................................................................................................................................................................................................................................23200.051100000
...............................................................................AGGAGCATTGTTTCGGAGAGCA............................................................................................................................................................................................................................................................................22200.051100000
....................................................................................................................................................................TCAACGGGGCCGG--TGTAGAAT......................................................................................................................................................................................21200.051100000
...................................................................................GCATTGTTTCGGAGAGCAGTCCACA.....................................................................................................................................................................................................................................................................25200.051100000
...........................................................GCCGACGTCAGGACGAGTAGAG................................................................................................................................................................................................................................................................................................22200.051001000
......................................................................GACGAGTAGAGGAGCATTGTTTCG...................................................................................................................................................................................................................................................................................24200.051100000
.........CCGCCAGGGTCGTCGAGACTCACGCC..............................................................................................................................................................................................................................................................................................................................................26200.051100000
........................................................................................................................................................................................................................................................................................................................................TCTAGTATAAGTTAGTTT-AGGG-.................22200.051100000
...................................GGCGCGGACGGAAGGGTCAGG.........................................................................................................................................................................................................................................................................................................................21200.051010000
..............................................................................................GAGAGCAGTCCACAAGCTGGCAAG...........................................................................................................................................................................................................................................................24200.051100000
.............................................................CGACGTCAGGACGAGTAGAGG...............................................................................................................................................................................................................................................................................................21200.051000001
....................................................................................CATTGTTTCGGAGAGCAGTCCACAAGC..................................................................................................................................................................................................................................................................27200.051100000
..............................................................................GAGGAGCATTGTTTCGGAGAGCAGTC.........................................................................................................................................................................................................................................................................26200.051100000
.......................................................................................TGTTTCGGAGAGCAGTCCACAAGCTGG...............................................................................................................................................................................................................................................................27200.051100000
...........................................................................GTAGAGGAGCATTGTTTCGGAG................................................................................................................................................................................................................................................................................22200.051100000
....................................GCGCGGACGGAAGGGTCAGGGTC......................................................................................................................................................................................................................................................................................................................23200.051000001
........................................GGACGGAAGGGTCAGGGTCGCCGAC................................................................................................................................................................................................................................................................................................................25200.051000001
........................................................................................GTTTCGGAGAGCAGTCCACAAGCTG................................................................................................................................................................................................................................................................25200.051100000
......................CGAGACTCACGCCGGCGCGG.......................................................................................................................................................................................................................................................................................................................................20200.051010000
.........................................GACGGAAGGGTCAGGGTCG.....................................................................................................................................................................................................................................................................................................................19200.051100000
.................................................................GTCAGGACGAGTAGAGGAGCATT.........................................................................................................................................................................................................................................................................................23200.051100000
.................................................GGTCAGGGTCGCCGACGTCAGGAC........................................................................................................................................................................................................................................................................................................24200.051010000
....................................................................AGGACGAGTAGAGGAGCATTGTTT.....................................................................................................................................................................................................................................................................................24200.051100000
..............................................................................................................................AATA------------GTTGAAG-CCTAAGGAAGGC...............................................................................................................................................................................................................23200.051010000
..........................................................................................TTCGGAGAGCAGTCCACAAGCTG................................................................................................................................................................................................................................................................23200.051100000
.........................GACTCACGCCGGCGCGGACGGAAG................................................................................................................................................................................................................................................................................................................................24200.051010000
....................GTCGAGACTCACGCCGGCGCGGA......................................................................................................................................................................................................................................................................................................................................23200.051100000
...............................................................................AGGAGCATTGTTTCGGAGAGC.............................................................................................................................................................................................................................................................................21200.051000010
......................................................................................................TCCACAAGCTGGCAAGG--CTGCCAAT................................................................................................................................................................................................................................................25200.051010000
...............................................AGGGTCAGGGTCGCCGACGTC.............................................................................................................................................................................................................................................................................................................21200.051010000
......................CGAGACTCACGCCGGCGCGGACGGAAG................................................................................................................................................................................................................................................................................................................................27200.051100000
.........................................................................GAGTAGAGGAGCATTGTTTCGGAGAG..............................................................................................................................................................................................................................................................................26200.051010000
..............................................................................GAGGAGCATTGTTTCGGAGAG..............................................................................................................................................................................................................................................................................21200.051100000
...................................................TCAGGGTCGCCGACGTCAG...........................................................................................................................................................................................................................................................................................................19200.051100000
..................................................................................AGCATTGTTTCGGAGAGCAGTG.........................................................................................................................................................................................................................................................................22200.051100000
.....................................................................................................................................................................................................................................................................................................................................AAGTCTAGTATAAGTTAGTTT-AGGG-C................26200.051000010
...................................GGCGCGGACGGAAGGGTCA...........................................................................................................................................................................................................................................................................................................................19200.051000001
.............................................................................AGAGGAGCATTGTTTCGGAGAGC.............................................................................................................................................................................................................................................................................23200.051100000
................................................................................................GAGCAGTCCACAAGCTGGCAAGG--CTG.....................................................................................................................................................................................................................................................26200.051100000
..............................................................GACGTCAGGACGAGTAGAGGAGCATTG........................................................................................................................................................................................................................................................................................27200.051100000
....GATCACCGCCAGGGTCGTCGA........................................................................................................................................................................................................................................................................................................................................................21200.051100000
..........CGCCAGGGTCGTCGAGACTCACGCC..............................................................................................................................................................................................................................................................................................................................................25200.051100000
...................................................................CAGGACGAGTAGAGGAGCATTGT.......................................................................................................................................................................................................................................................................................23200.051100000
.........................................................................GAGTAGAGGAGCATTGTTTCGGAGAGT.............................................................................................................................................................................................................................................................................27200.051100000
......................................................................................TTGTTTCGGAGAGCAGTCCACA.....................................................................................................................................................................................................................................................................22200.051100000
.........................GACTCACGCCGGCGCGGACGGAAGG...............................................................................................................................................................................................................................................................................................................................25200.051100000
..................................................................................................................................................AAG-CCTAAGGAAGGCCTTCAACGGGG....................................................................................................................................................................................................26200.051010000
..............................................................GACGTCAGGACGAGTAGAGGAG.............................................................................................................................................................................................................................................................................................22200.051001000
..............................................................................................GAGAGCAGTCCACAAGCTGGCA.............................................................................................................................................................................................................................................................22200.051100000
.................................................................................GAGCATTGTTTCGGAGAGCAGT..........................................................................................................................................................................................................................................................................22200.051001000
..............................ACGCCGGCGCGGACGGAAGGGTCAGG.........................................................................................................................................................................................................................................................................................................................26200.051100000
........ACCGCCAGGGTCGTCGAGACTCACGCC..............................................................................................................................................................................................................................................................................................................................................27200.051100000
......................................................................................................................G--CTGCCAATA------------GTTGAAG-CCTAAGG....................................................................................................................................................................................................................24200.051100000
.........................................................................GAGTAGAGGAGCATTGTTTCGGAGAGCT............................................................................................................................................................................................................................................................................28200.051100000
..........................................................................AGTAGAGGAGCATTGTTTCGGA.................................................................................................................................................................................................................................................................................22200.051100000
...............................................AGGGTCAGGGTCGCCGACGTCAGG..........................................................................................................................................................................................................................................................................................................24200.051100000
...............................................................................................................................ATA------------GTTGAAG-CCTAAGGAAGG................................................................................................................................................................................................................21200.051000001
droBip1
AGGGGCTCACAGGAAGGGTAGGAGCAACGCACCCCCGCGCGGACGGAAGGGTCAGGGTCGCCGTCGTTAGGACTAGCAATGGAGCGAAGTGTAGAAGAGCAGTCGACAAGCTGGCGTGG--CTGCCAGTG-----------GGTTGAAG-CCGGATGGAAGCCTTCAACGGGGCCGA--TGTTAACGGA--TTGGATTGGATTTTATATTAATTTGAAGTTTTTGTAAATTTGA-----A-TTGTAA------------------TTGAATTGT---T---------A------------------------GTCTCT-------AAATCTATTCTAAGATAGCTT-AGGG-CGGA-GCGGGAGCGAAASizeHit CountTotal NormTotal
No Reads
droKik1
AGTGGCTCCTGGGAAGGATCGTCGCGACGCACGCAGGAGAGGACGGCATGGTCAGGGTCGTCGACCTTAGGAGAAGCGATGGAGCAGTGTTCCGGAGGGCCATCCACAAGCTGGCGCCG--CTGCCAGTG-----------TCTTGAAG-CCGT--GCAGGCGTTCAACGGGGCCGG--TGTTGTCTTA--ATTG--------------------------------------A-----GAC----------------------------------------TA----------------------------AATTTGTATTTTGTAGAAGAGTGTA----------AGGG-CGAAGGCGGGAGCACAASizeHit CountTotal NormTotal
No Reads
droFic1
AATGGCTGATAGGGAGGATCATCGCCACTCACGCAGGAGAGGACGGAATGGTCAGGGTCGTCGAAGTGAGGACCAGCGGAGGAGGAATTTTTAAGCGGGCCATCCATAAATTGGCGCCG--CTTCCAATA-----------TGTTGAAG-CCGG--ACGGGCCTTCAACGGGGCCGG--TGTTGGCTGA---------------------------------------------AGCCAGTTTTTCG----TTTT-TTATTT--TTGAA-TTGTTAGAATAAGTAT-CG----T----------------TGAATTTG-------AAGTTTACTGTAAGTTAGTTT-AGGG-CGAAGGCGGGAGCGCAASizeHit CountTotal NormTotal
No Reads
droEle1
AGTGGCTCCTGGGTCGAATCGTCGGGACTCACGCAGGGAAGGATGACATGGTCAGGGTCGTCGACG------------GTGGAGGAGTTTTTTGGCGGGCCATCCACAAGCTGGCGCCG--CTACCAGTG------------------G-CCTT--TCAGGCCTTTAACGGGGCCGG--TGTTGGCTCA--T-------------------------------------------TTCAGTTT--------TT---------TATTGAA-TTG-------------------A-CGTACCAATTGTTGAAGCTATTTG-------AAGTTTACTGTAAGTTAGCTT-AAAG-CTAAGGCGGGAGCACAASizeHit CountTotal NormTotal
No Reads
droRho1
AATGGCTCCTCGGCAGAATAGTCGCCAGGCACGCAGGGGAGGACGGCATGGTCAGGGTCGTCGACGTGCGAACTAGTGGAGGAGGCCTTTTTCGGCGGGCCATTCATAAGTTGGCGCCG--CTTCCATTC-----------TGTTGAAG-CCCG--ATGGGTGTTCAACGGGGCCGG--TGTTCGCGCAA-A-------------------------------------TTTGA-----A-TTTTAA------------------TGAAATTGT---T---------A--------------------A-AAAACTTG-------AAGTTTAGTGTAAGTTAGTTT-AGGG-CGAAGGCGGGAGCACAASizeHit CountTotal NormTotal
No Reads
droBia1
AATTACTCCTGGCGAGAATCATCGCCAGACAAAC---------------------------------------AAGCGGAGTAGGAGTTTTTCGGTGGGCCATCCATATACTGGCGCCG--CTTCCTATA-----------GGTTGAAG-CCTT----AAGCGTTCAACGGTTCCGG--TGTTGGTTGA---------------------------------------------AACCATAAA-------ATTG----------TTGGA-TT---------CAGAC-C--------------------A-TAAATTTG-------AAGTTTAGTGTAAGTTAGTTT-AGGG-CAATGGCGGGTGCAAAASizeHit CountTotal NormTotal
No Reads
droTak1
AATGGCTCCTGGGGAGAATCATCGCCAGGCACGCAGGGGAGGACGGCATGGTCAGGGTCGTCGACGTTAGGACGGGCGCAGGAGGCGTTTTTCGGCGAGCCATCCATAAATTGGCGCCG--CTTCCCATT-----------TGTTGAAG-CCT----GAAGCGTTCAACGGGGCCGG--TGTTGCGAGA--TTTG--------------------------------------A-----ATT----------------------------------------TGTACT--------------------T-GAAGTTTG-------AAGTTTAGTGTAAGTTAGTTT-AGGA-CGAAGGCGGGTGCACAASizeHit CountTotal NormTotal
No Reads
droEug1
AGTGGAGAATCGGGCGCGTGGTGGCGGTGCACGTCGGCACTGACGGCAAGGGCCGAGTGGCGGACGTGAAGGCA-GCGGTGGGAACGTACCGGTGGAACGTATTCACAGATTGGCGCTT--TTATCTTTGCAA--------TCCTGAAG-GACG--TCGACCCTTCAGAGGGGGTGG--TGTTCATTCAA-T--------------------------------------------GTCCGGTCT--TTC---------------------------------------------------------------------------------AGTGTA----------AAGAGGGGA-GCGG-GGACCAASizeHit CountTotal NormTotal
No Reads
dm3
AGTGGCTGCTGGGAATAGTCATCGCGACGCACGCACGTGACTACGGCATGGTT-------CTGACCCTAAAAGGAGCGACGGAGCAGTGTTTCG-TGAGCGATTCACAAGCTGGTGCCG--CTGTCAGTT-----------TGTTGAAG-CCGT--TGAGGCCATCAACGGGCCAGG--TTGAGGTTGAG-G----TTGGCTG------------------------------AAGTTGT-----AGT-GATT---------TATTGGT-TT----------------------TGTATGAAGTAC-AC-AACATTTT-------TAGTCTAGTGTAAGTTAGTTT-A--------------------ASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..............................................CATGGTT-------CTGACCCTAAAAGGAGCGAC.................................................................................................................................................................................................................................................................................................2716.0060000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................TTCG-TGAGCGATTCACAAGCTGGTG.............................................................................................................................................................................................................................................................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............GAATAGTCATCGCGACGCACGCACG............................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................CG-TGAGCGATTCACAAGCTGGTGCCG--C.......................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000100000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................CCCTAAAAGGAGCGACGGAGCAGTG........................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................GAGGCCATCAACGGGCCAGG--TTGAGGT.......................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
......................................................................................................................................................................................AGGTTGAG-G----TTGGCTG------------------------------AC......................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
..........................................................................................................................................................................................TGAG-G----TTGGCTG------------------------------AAGTTGT-----AGT-GA......................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...................................CGTGACTACGGCATGGTT-------CTGACCCTA............................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................T-----AGT-GATT---------TATTGGT-TT----------------------TGTATGAAG..................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GCTGGGAATAGTCATCGC........................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CGCACGTGACTACGGCATGGTT-------CTG..................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....CTGCTGGGAATAGTCATCGCGACGC...................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...............TAGTCATCGCGACGCACGCACG............................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................T-------CTGACCCTAAAAGGAGCGACGGAGCAG..........................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................T-----------TGTTGAAG-CCGT--TGAGGCCA.............................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................TGAGCGATTCACAAGCTGGTGCCG--C.......................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................TGAGCGATTCACAAGCTGGTGA............................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.....................................TGACTACGGCATGGTT-------CTGACCCTA............................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................TCAACGGGCCAGG--TTGAGGTTGAG-G----G............................................................................................................................................................................2611.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................AGGTTGAG-G----TTGGCTG------------------------------ACC.....................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..............................................................................................................................................................................AGG--TTGAGGTTGAG-G----TTGGCTG------------------------------........................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
......................CGCGACGCACGCACGTGACTACGGCA.................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................GCACGTGACTACGGCATGGTT-------CTGA.................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CGCACGTGACTACGGCATGGTT-------C....................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................TTGAG-G----TTGGCTG------------------------------AAGTTGT-----AGT-GA......................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TGGGAATAGTCATCGCGACGCACGCACG............................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...........................................................................................TCG-TGAGCGATTCACAAGCTGGTGCCG--........................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................CCCTAAAAGGAGCGACGGAGC............................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................TTGAGGTTGAG-G----TTGGCTG------------------------------AAGT....................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
........CTGGGAATAGTCATCGCGACGCA..................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................GCAGTGTTTCG-TGAGCGATTC........................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................TTTCG-TGAGCGATTCACAAGCTGGTGC............................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
AGTGGCTCCTGGGAAGGATCGTCGCGACGCACGCAGGAGAGGACGGCAAGGTCAGGGTCGTCGACCTTAGGAGGAGTGATGGAGCCATCTTCCGGAGGGCGATCCACAAGCTGGCGCCG--CTGCCGATT-----------TGTTGAAG-CCGT--GGAGGCGTTCAACGGGGCCGG--TGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
No Reads
droSec2
GATGGCCTTTGGCGAGAGTCATGC---AGTTGGCAGAGACG--------------GGTTGCAGAATTGAGGACCGCGTCTGGA---GTAATAAGGCGGGCAGTGCACAAGCTGTGTCTGCTTCCCCTTGAGGA--C---TCTGTTGGAA-G-----CCAAGCTTCCAAGGGGGAGGA--TGTTGGGTCA--T--------------------------------------------GCAG--------------------------------------------------------------------------------------------------------------------------------CSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................................................................................................................TGAGGA--C---TCTGTTGGAA-G-----CCAAGCT..............................................................................................................................................................................................................25201.002000200
..........................................................TGCAGAATTGAGGACCGCGTCTGGA---...........................................................................................................................................................................................................................................................................................25200.651313000
............................................................CAGAATTGAGGACCGCGTCTGG...............................................................................................................................................................................................................................................................................................22200.4088000
.....................................................................................................................TGCTTCCCCTTGAGGA--C---TCTGTTGGA.............................................................................................................................................................................................................................26200.3577000
...............................................................................................................................TGAGGA--C---TCTGTTGGAA-G-----CCAAGC...............................................................................................................................................................................................................24200.3570070
..............................................................................................................................TTGAGGA--C---TCTGTTGGAA-G-----CCAAGC...............................................................................................................................................................................................................25200.2555000
...............................................................................................................................TGAGGA--C---TCTGTTGGAA-G-----CCAAGCTTC............................................................................................................................................................................................................27200.2550005
...........................................................GCAGAATTGAGGACCGCGTCT.................................................................................................................................................................................................................................................................................................21200.2044000
.......................................CG--------------GGTTGCAGAATTGAGGACCGCGTC..................................................................................................................................................................................................................................................................................................2650.2010100
........................................................................................................................TTCCCCTTGAGGA--C---TCTGTTGGAA-G-----C....................................................................................................................................................................................................................26200.0510010
..........................................................TGCAGAATTGAGGACCGCGTCTGGA---GT.........................................................................................................................................................................................................................................................................................27200.0510100
....................................................................................................................CTGCTTCCCCTTGAGGA--C---TCTGTTGG..............................................................................................................................................................................................................................26200.0511000
................................................................ATTGAGGACCGCGTCTGGA---GTAATA.....................................................................................................................................................................................................................................................................................25200.0510010
.....................................................................................................................TGCTTCCCCTTGAGGA--C---TCTGT.................................................................................................................................................................................................................................22200.0511000
...........................................................................................................................CCCTTGAGGA--C---TCTGTTGGAA-G-----CCA..................................................................................................................................................................................................................25200.0510010
.................................................................................................................................AGGA--C---TCTGTTGGAA-G-----CCAAGCTTC............................................................................................................................................................................................................25200.0510001
.............................................................AGAATTGAGGACCGCGTCTGGA---GT.........................................................................................................................................................................................................................................................................................24200.0510010
...................................................................GAGGACCGCGTCTGGA---GTAATAAGGC.................................................................................................................................................................................................................................................................................26200.0510100
...........................................................GCAGAATTGAGGACCGCGTCTGGA---GC.........................................................................................................................................................................................................................................................................................26200.0511000
...........................................................GCAGAATTGAGGACCGCGTCTGA...............................................................................................................................................................................................................................................................................................23200.0511000
droYak3
AGTGGCTCCTGGGAAGGATCGTCGCGACGCACGCAGGAGAGGACGGCAAGGTCAGGG-CGTCGACCTTAGGAGGAGTGATGGAGCCATCTTCCGGAGGGCGATCCACAAGCTGGCGCCG--CTGCCGATT-----------TGTTGAAG-CCGT--GGAGACGTTCAACGGAGCCGG--TGTTGGCGGA---------------------------------------------AAATATGAGTTCGGTTATTGT-TTATTG--TTGGA-TT-------------------------GTGAAGGAG-AA-AAAATCTG-------AAGTCTAGTGTAAGTTAGTTT-AGGG-CGAAGGCGGGAGCATAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............................................................................................................................CGATT-----------TGTTGAAG-CCGT--GGAGACG..............................................................................................................................................................................................................241109.001090180000100090
.............................................................................................................................CGATT-----------TGTTGAAG-CCGT--GGAGACGT.............................................................................................................................................................................................................25152.0052030100100047
..........................................................................................................................TGCCGATT-----------TGTTGAAG-CCGT--GGAGA................................................................................................................................................................................................................25122.0022021000000019
.................................................................................................................................................................................................................................................AGTTCGGTTATTGT-TTATTG--TTGGA-T..................................................................................................26119.0019020000000017
..............................................................................................................................................................................................................................................ATGAGTTCGGTTATTGT-TTATTG--TT.......................................................................................................25117.0017000000000017
.............................................................................................................................................................................................................................................TATGAGTTCGGTTATTGT-TTATTG--TT.......................................................................................................26113.0013021000000010
.............................................................................................................................................................................................................................................TATGAGTTCGGTTATTGT-TTATTG--T........................................................................................................25113.0013000000000013
.............AAGGATCGTCGCGACGCACGCAGG............................................................................................................................................................................................................................................................................................................................................24209.4018801200001000175
.................................................................................................................................................................................................................................................AGTTCGGTTATTGT-TTATTG--TTGG.....................................................................................................2419.00909000000000
............................................GGCAAGGTCAGGG-CGTCGACCTTAGGAG........................................................................................................................................................................................................................................................................................................2818.00800100000007
...................................................TCAGGG-CGTCGACCTTAGGAGGAGT....................................................................................................................................................................................................................................................................................................2518.00801000000007
...................................................TCAGGG-CGTCGACCTTAGGAGGAG.....................................................................................................................................................................................................................................................................................................2417.00702000000005
.................................................................................................................................................................................................................................................AGTTCGGTTATTGT-TTATTG--TTGGA-...................................................................................................2517.00705200000000
.........................................................................................................................................................................................................................................................TATTGT-TTATTG--TTGGA-TT-------------------------GTGAAGGA................................................................2716.00602000000004
.............................................................................................................................CGATT-----------TGTTGAAG-CCGT--GGAGAC...............................................................................................................................................................................................................2315.00504100000000
........................................GGACGGCAAGGTCAGGG-CGTCGACCT..............................................................................................................................................................................................................................................................................................................2614.00402200000000
...................................................................................................................................................................................TGTTGGCGGA---------------------------------------------AAATATGAGTTCGGT........................................................................................................................2514.00402200000000
.............................................................................................................................CGATT-----------TGTTGAAG-CCGT--GGAGA................................................................................................................................................................................................................2214.00403100000000
.................................................................................................................................................................................................................................................AGTTCGGTTATTGT-TTATTG--TTG......................................................................................................2314.00404000000000
.........................................GACGGCAAGGTCAGGG-CGTCGACCT..............................................................................................................................................................................................................................................................................................................2514.00401300000000
..............................................................................................................................GATT-----------TGTTGAAG-CCGT--GGAGACG..............................................................................................................................................................................................................2314.00404000000000
...............................................................................................................................ATT-----------TGTTGAAG-CCGT--GGAGACGTTC...........................................................................................................................................................................................................2513.00301100010000
.................................................................................................................................................GAAG-CCGT--GGAGACGTTCAACGGAGCC..................................................................................................................................................................................................2713.00300300000000
.............................................................................................................................CGATT-----------TGTTGAAG-CCGT--GGAGACGTTC...........................................................................................................................................................................................................2713.00302000010000
.............................................................................................................................CGATT-----------TGTTGAAG-CCGT--GGAGACGTT............................................................................................................................................................................................................2613.00302100000000
.............AAGGATCGTCGCGACGCACGCAG.............................................................................................................................................................................................................................................................................................................................................23202.90580261000100030
.........................................................................GAGTGATGGAGCCATCTTCCGGAGT...............................................................................................................................................................................................................................................................................25202.9058010000000057
....................................................CAGGG-CGTCGACCTTAGGAGGAGTGA..................................................................................................................................................................................................................................................................................................2612.00202000000000
....................................................................................................................................................G-CCGT--GGAGACGTTCAACGGAGCCGG--..............................................................................................................................................................................................2612.00200000000002
.................................CAGGAGAGGACGGCAAGGTCAGGG-C......................................................................................................................................................................................................................................................................................................................2512.00200200000000
..............................................................................................................................GATT-----------TGTTGAAG-CCGT--GGAGACGTT............................................................................................................................................................................................................2512.00201100000000
.............................................................................................................................................................GAGACGTTCAACGGAGCCGG--TGTTGG........................................................................................................................................................................................2612.00200200000000
...............................................................................................................................ATT-----------TGTTGAAG-CCGT--GGAGACGT.............................................................................................................................................................................................................2312.00202000000000
...................................................TCAGGG-CGTCGACCTTAGGAGGAGTGA..................................................................................................................................................................................................................................................................................................2712.00201100000000
.................................................................................................................................................................................................................................................AGTTCGGTTATTGT-TTATTG--TTGT.....................................................................................................2412.00202000000000
..................................................................................................................................................................GTTCAACGGAGCCGG--TGTTGGC.......................................................................................................................................................................................2212.00201100000000
....................................................................................................................................................................................................................................................................................................................A-AAAATCTG-------AAGTCTAGTGTAAGT.............................24141.4320015500000000
.............AAGGATCGTCGCGACGCACGCAGGTT..........................................................................................................................................................................................................................................................................................................................................26201.2024000000000024
.............AAGGATCGTCGCGACGCACGCAGGAGT.........................................................................................................................................................................................................................................................................................................................................27201.1523000000000023
.........................................................................GAGTGATGGAGCCATCTTCCGGA.................................................................................................................................................................................................................................................................................23201.1022018400000000
..................................................GTCAGGG-CGTCGACCTTAGGAG........................................................................................................................................................................................................................................................................................................2211.00101000000000
..........................................ACGGCAAGGTCAGGG-CGTCGACCTTT............................................................................................................................................................................................................................................................................................................2611.00101000000000
........................................................................................................................................................................................GCGGA---------------------------------------------AAATATGAGTTCGGTTATTGT-.................................................................................................................2611.00101000000000
...................................................TCAGGG-CGTCGACCTTAGGAGGAGC....................................................................................................................................................................................................................................................................................................2511.00100100000000
.............................................................................................................................................TGTTGAAG-CCGT--GGAGACGTTCAACG.......................................................................................................................................................................................................2611.00101000000000
..........................................................................................................................TGCCGATT-----------TGTTGAAG-CCGT--GGAGAC...............................................................................................................................................................................................................2611.00100100000000
..................................................................................................................................................AAG-CCGT--GGAGACGTTCAACGGA.....................................................................................................................................................................................................2311.00101000000000
........................................GGACGGCAAGGTCAGGG-CGTCGACC...............................................................................................................................................................................................................................................................................................................2511.00100100000000
.................................................................................................................................................................................................................................................AGTTCGGTTATTGT-TTATTG--T........................................................................................................2111.00100100000000
.................................................................................................................................................................CGTTCAACGGAGCCGG--TGTTGGCGGA---------------------------------------------.......................................................................................................................................2611.00101000000000
.....................................................AGGG-CGTCGACCTTAGGAGGAGTGAT.................................................................................................................................................................................................................................................................................................2611.00101000000000
...................................GGAGAGGACGGCAAGGTCAGGG-CGT....................................................................................................................................................................................................................................................................................................................2511.00100100000000
.................................................................................................................................................................................................................................................AGTTCGGTTATTGT-TTATTG--.........................................................................................................2011.00101000000000
..........................................................................................................................TGCCGATT-----------TGTTGAAG-CCGT--GGAGACG..............................................................................................................................................................................................................2711.00100100000000
................................................................................................................................................................ACGTTCAACGGAGCCGG--TGTTGG........................................................................................................................................................................................2311.00100000010000
.........................................................................................................................................................T--GGAGACGTTCAACGGAGCCGG--TGTTG.........................................................................................................................................................................................2711.00101000000000
...........................................................................................................................GCCGATT-----------TGTTGAAG-CCGT--GGAGAC...............................................................................................................................................................................................................2511.00100100000000
...............................................................................................................................................................................................................................................................................T-------------------------GTGAAGGAG-AA-AAAATCTG-------AAGTCT......................................2651.00500500000000
...............................................AAGGTCAGGG-CGTCGACCTTAGGAGG.......................................................................................................................................................................................................................................................................................................2611.00100100000000
...............................................................................................................................................................................................................................................TGAGTTCGGTTATTGT-TTATTG--TTGGA-...................................................................................................2711.00100100000000
.....................................................................................................................................................................CAACGGAGCCGG--TGTTGGCGG.....................................................................................................................................................................................2111.00101000000000
.............................................................................................................................................TGTTGAAG-CCGT--GGAGACGTTCAA.........................................................................................................................................................................................................2411.00100010000000
...........................................................................................................................................................................AGCCGG--TGTTGGCGGA---------------------------------------------AAATATGAGT.............................................................................................................................2611.00100100000000
....................................................................................................................................................................TCAACGGAGCCGG--TGTTGGC.......................................................................................................................................................................................2011.00101000000000
...............................................................................................................................................................GACGTTCAACGGAGCCGG--TGTTGG........................................................................................................................................................................................2411.00101000000000
...............................................................................................................................................................................................................................................TGAGTTCGGTTATTGT-TTATTG--TTGGA-T..................................................................................................2811.00100000010000
.................................................................................................................................................................CGTTCAACGGAGCCGG--TGTTGGCG......................................................................................................................................................................................2411.00101000000000
.....................................................AGGG-CGTCGACCTTAGGAGGAGTGA..................................................................................................................................................................................................................................................................................................2511.00100010000000
.........................................GACGGCAAGGTCAGGG-CGTCGACCTTA............................................................................................................................................................................................................................................................................................................2711.00101000000000
...............................................................................................................................ATT-----------TGTTGAAG-CCGT--GGAGACGC.............................................................................................................................................................................................................2311.00100100000000
..........................................................................................................................................................................................................................................................ATTGT-TTATTG--TTGGA-TT-------------------------GTGAAGG.................................................................2511.00101000000000
...................................................................................................................................................................................TGTTGGCGGA---------------------------------------------AAATATGAGTTCGGC........................................................................................................................2511.00100100000000
..............................................CAAGGTCAGGG-CGTCGACCTTAGG..........................................................................................................................................................................................................................................................................................................2411.00100100000000
.............AAGGATCGTCGCGACGCACGCAGGAGA.........................................................................................................................................................................................................................................................................................................................................27201.0020020000100017
....................................................................................................................................................................TCAACGGAGCCGG--TGTTGGCGGA---------------------------------------------AAA....................................................................................................................................2611.00100100000000
........................................................................................................................................................................................................................................................TTATTGT-TTATTG--TTGGA-TT-------------------------GTGAAGGA................................................................2811.00100000000001
.................................................................................................................................................................CGTTCAACGGAGCCGG--TGTTGGCGG.....................................................................................................................................................................................2511.00101000000000
..................................................GTCAGGG-CGTCGACCTTAGGAGGAG.....................................................................................................................................................................................................................................................................................................2511.00101000000000
.....................................................................................................................................................................................TTGGCGGA---------------------------------------------AAATATGAGTTCGGT........................................................................................................................2311.00101000000000
......................................................................................................................................................................................TGGCGGA---------------------------------------------AAATATGAGTTCGGTTATTG...................................................................................................................2711.00100100000000
.............................................................................................................................CGATT-----------TGTTGAAG-CCGT--GGAGACGG.............................................................................................................................................................................................................2511.00100000000001
................................................................................................................................................TGAAG-CCGT--GGAGACGTTCAACGGAGC...................................................................................................................................................................................................2711.00101000000000
.......................................................GG-CGTCGACCTTAGGAGGAGTGATG................................................................................................................................................................................................................................................................................................2511.00100010000000
................................................................................................................................TT-----------TGTTGAAG-CCGT--GGAGAC...............................................................................................................................................................................................................2011.00100100000000
...............................................................................................................................ATT-----------TGTTGAAG-CCGT--GGAGAC...............................................................................................................................................................................................................2111.00101000000000
..................................................................................................................................................................................................................................................GTTCGGTTATTGT-TTATTG--TTGGA-T..................................................................................................2511.00101000000000
............................................................................................................................CCGATT-----------TGTTGAAG-CCGT--GGAGACGTT............................................................................................................................................................................................................2711.00100100000000
...................................................................................................................................................................................TGTTGGCGGA---------------------------------------------AAATATGAGTTCG..........................................................................................................................2311.00100000010000
.............................................................................................................................................................................................................................................TATGAGTTCGGTTATTGT-TTATTG--TTGGA-...................................................................................................2911.00100100000000
..................................................................................................................................................................GTTCAACGGAGCCGG--TGTTGGCG......................................................................................................................................................................................2311.00101000000000
.............................................................................................................................................................GAGACGTTCAACGGAGCCGG--C.............................................................................................................................................................................................2111.00100100000000
.............................................................................................................................................................GAGACGTTCAACGGAGCCGG--TGTTG.........................................................................................................................................................................................2511.00100010000000
................................................................................................................................................TGAAG-CCGT--GGAGACGTTCAACGG......................................................................................................................................................................................................2411.00101000000000
....................................................................................................................................................G-CCGT--GGAGACGTTCAACGGAGCC..................................................................................................................................................................................................2411.00101000000000
...............................................................................................................................................................................GG--TGTTGGCGGA---------------------------------------------AAATATGAGTTCGGT........................................................................................................................2711.00101000000000
.........................................................................................................................................................T--GGAGACGTTCAACGGAGCCGG--TGT...........................................................................................................................................................................................2511.00100100000000
.............................................................................................................................................................GAGACGTTCAACGGAGCCGG--TGT...........................................................................................................................................................................................2311.00100100000000
.................................................................................................................................................................................................................................................AGTTCGGTTATTGT-TTATTG--TTGGA-C..................................................................................................2611.00100100000000
......................................................................................................................................................CCGT--GGAGACGTTCAACGGAGCCGG--..............................................................................................................................................................................................2511.00101000000000
.........................................................................GAGTGATGGAGCCATCTTCCGG..................................................................................................................................................................................................................................................................................22200.9018018000000000
..................TCGTCGCGACGCACGCAGGAGAGGA......................................................................................................................................................................................................................................................................................................................................25200.8517000000000017
..............................................................................................................................................................................................................................................................T-TTATTG--TTGGA-TT-------------------------GTGAAGGAG-A.............................................................2430.67200000000002
...........................................................................................................................................................................................................................................................TTGT-TTATTG--TTGGA-TT-------------------------GTGAAGG.................................................................2430.67202000000000
....................................................................................................................................................................................................................................................................................................................A-AAAATCTG-------AAGTCTAGTGTAAGTT............................25140.64908100000000
.............AAGGATCGTCGCGACGCACGCAGGAGAG........................................................................................................................................................................................................................................................................................................................................28200.5511000000000011
.............AAGGATCGTCGCGACGCACGCAGGAGATT.......................................................................................................................................................................................................................................................................................................................................29200.5511000000000011
.........................................................................GAGTGATGGAGCCATCTTCCGGAGG...............................................................................................................................................................................................................................................................................25200.501009010000000
...................................................................................................................................................................................................................................................TTCGGTTATTGT-TTATTG--TTGGA-T..................................................................................................2420.50101000000000
.......................................................................................................CCACAAGCTGGCGCCG--CTGCCGAT................................................................................................................................................................................................................................................24200.40800000000008
...............................................................................................................................................................................................................................................................................T-------------------------GTGAAGGAG-AA-AAAATCTG-------AAGTC.......................................2550.40200200000000
.............AAGGATCGTCGCGACGCACGCA..............................................................................................................................................................................................................................................................................................................................................22200.40808000000000
.........................................................................GAGTGATGGAGCCATCTTCCGGAGGGC.............................................................................................................................................................................................................................................................................27200.35704300000000
...........................................................................................................................................................................................................................................................TTGT-TTATTG--TTGGA-TT-------------------------GTGAAGGA................................................................2530.33101000000000
............................................................................................................................................................................................................................................................TGT-TTATTG--TTGGA-TT-------------------------GTGAAGGT................................................................2430.33101000000000
....................................................................................................................................................................................................................................................................................................................A-AAAATCTG-------AAGTCTAGTGTAAG..............................23140.29404000000000
.........................................................................................................................................................................................................................................................TATTGT-TTATTG--TTGGA-TT-------------------------GTGAACC.................................................................2640.25100010000000
....................................................................................................................................................................................................................................................TCGGTTATTGT-TTATTG--TTGGA-T..................................................................................................2340.25101000000000
.........................................................................................................................................................................................................................................................TATTGT-TTATTG--TTGGA-TT-------------------------GTGA....................................................................2340.25100010000000
....................................................................................................................................................................................................................................................TCGGTTATTGT-TTATTG--TTGGA-TT-------------------------G.......................................................................2540.25101000000000
......................................................................................................................................................................................................................................................GGTTATTGT-TTATTG--TTGGA-TT-------------------------........................................................................2240.25101000000000
.............AAGGATCGTCGCGACGCACGCAGGAT..........................................................................................................................................................................................................................................................................................................................................26200.20403000000001
............................................................................TGATGGAGCCATCTTCCGGAGGGCGA...........................................................................................................................................................................................................................................................................26200.20400210010000
.............AAGGATCGTCGCGACGCACGCAGGA...........................................................................................................................................................................................................................................................................................................................................25200.20404000000000
..........................................................................................................................................................................................................................................................................................................TGAAGGAG-AA-AAAATCTG-------AAGTCTAGTG..................................2850.20100100000000
.....................TCGCGACGCACGCAGGAGAGGACGGC..................................................................................................................................................................................................................................................................................................................................26200.20401300000000
..........................................................................................................................................................................................................................................................................................................TGAAGGAG-AA-AAAATCTG-------AAGTCTAGT...................................2750.20100100000000
.............AAGGATCGTCGCGACGCACG................................................................................................................................................................................................................................................................................................................................................20200.20404000000000
...........................................................................................................................................................................................................................................................TTGT-TTATTG--TTGGA-TT-------------------------GTGAAG..................................................................23120.17202000000000
.....................................................................................CATCTTCCGGAGGGCGATCCACAAGC..................................................................................................................................................................................................................................................................26200.15302100000000
.....................TCGCGACGCACGCAGGAGAGGACGG...................................................................................................................................................................................................................................................................................................................................25200.15301110000000
..........................................................................AGTGATGGAGCCATCTTCCGGAGGGC.............................................................................................................................................................................................................................................................................26200.15302100000000
.............AAGGATCGTCGCGACGCACGCAGGAGATA.......................................................................................................................................................................................................................................................................................................................................29200.15300000000003
...............................................................................................................................................................................................................................................................................................................................................TAAGTTAGTTT-AGGG-CGAAGGCGGG.......25200.15302100000000
......................................................................................................TCCACAAGCTGGCGCCG--CTGCCGA.................................................................................................................................................................................................................................................24200.15301110000000
...............................................................................................................TGGCGCCG--CTGCCGATT-----------TGTTGAAG-C..........................................................................................................................................................................................................................26200.15300300000000
..................TCGTCGCGACGCACGCAGGAGAGGAC.....................................................................................................................................................................................................................................................................................................................................26200.15302100000000
.........................................................................................TTCCGGAGGGCGATCCACAAGCTGG...............................................................................................................................................................................................................................................................25200.10202000000000
......................................................................................................TCCACAAGCTGGCGCCG--CTGCCGAT................................................................................................................................................................................................................................................25200.10202000000000
...............................................................................TGGAGCCATCTTCCGGAGGGCGATC.........................................................................................................................................................................................................................................................................25200.10200200000000
..........................................................................................TCCGGAGGGCGATCCACAAGCTGGCGC............................................................................................................................................................................................................................................................27200.10200200000000
..............................................................GACCTTAGGAGGAGTGATGGAGCC...........................................................................................................................................................................................................................................................................................24200.10200200000000
...................................................................................................................................................................................................................................................................................................................................................TTAGTTT-AGGG-CGAAGGCGGGAGC....24200.10200200000000
.........................................................................................TTCCGGAGGGCGATCCACAAGCTGGCGC............................................................................................................................................................................................................................................................28200.10202000000000
......................................................................................................TCCACAAGCTGGCGCCG--CTGCC...................................................................................................................................................................................................................................................22200.10201100000000
.............AAGGATCGTCGCGACGCACGCAGGAGAGG.......................................................................................................................................................................................................................................................................................................................................29200.10200000000002
.............AAGGATCGTCGCGACGCACGCAGGG...........................................................................................................................................................................................................................................................................................................................................25200.10200000000002
............................................................................TGATGGAGCCATCTTCCGGAGGGCG............................................................................................................................................................................................................................................................................25200.10200020000000
.................................................................................................................................................................................................................................................................................................................G-AA-AAAATCTG-------AAGTCTAGTGTAAGT.............................26130.08100010000000
......................................................................................................................................................................................................................................................................................................................AAAATCTG-------AAGTCTAGTGTAAGT.............................23140.07101000000000
....................................................................................................................................................................................................................................................................................................................A-AAAATCTG-------AAGTCTAGTGTAAGTTA...........................26140.07101000000000
....................................................................................................................................................................................................................................................................................................................A-AAAATCTG-------AAGTCTAGTGTAAGTTAG..........................27140.07100000010000
...................................................................................................................................................................................................................................................................................................................AA-AAAATCTG-------AAGTCTAGTGTAAGT.............................25140.07100100000000
.................................................................CTTAGGAGGAGTGATGGAGCC...........................................................................................................................................................................................................................................................................................21200.05100100000000
...................................................................................GCCATCTTCCGGAGGGCGATCCACAAGC..................................................................................................................................................................................................................................................................28200.05100100000000
.........................................................................................TTCCGGAGGGCGATCCACAAGCTGGC..............................................................................................................................................................................................................................................................26200.05101000000000
..................................................................................................................................................................................................................................................................................................................................................GTTAGTTT-AGGG-CGAAGG...........18200.05100000010000
.............................................................................................................................................................................................................................................................................................................................................TGTAAGTTAGTTT-AGGG-CGAAGGC..........24200.05100100000000
...............................................................................TGGAGCCATCTTCCGGAGGGCGATCCAC......................................................................................................................................................................................................................................................................28200.05100100000000
.............................................................................................................................................................................................................................................................................................................................................TGTAAGTTAGTTT-AGGG-CGAAGGCG.........25200.05100100000000
.....CTCCTGGGAAGGATCGTCGCGA......................................................................................................................................................................................................................................................................................................................................................22200.05101000000000
.............................................................................................................................CGATT-----------TGTTGAAG-CCGT--GGAG.................................................................................................................................................................................................................21200.05100100000000
...................CGTCGCGACGCACGCAGGAGAGGAC.....................................................................................................................................................................................................................................................................................................................................25200.05100100000000
..........................................................................................TCCGGAGGGCGATCCACAAGCTGGCGT............................................................................................................................................................................................................................................................27200.05101000000000
........................................................................................................................................................................................................................................................................................................................................TCTAGTGTAAGTTAGTTT-AGGG-C................23200.05100010000000
.............................................................................GATGGAGCCATCTTCCGGAGGG..............................................................................................................................................................................................................................................................................22200.05101000000000
.............................................................................................GGAGGGCGATCCACAAGCTGGCGCC...........................................................................................................................................................................................................................................................25200.05100100000000
........................................................................................................CACAAGCTGGCGCCG--CTGCCGATT-----------....................................................................................................................................................................................................................................24200.05101000000000
.........................................................................GAGTGATGGAGCCATCTTCCG...................................................................................................................................................................................................................................................................................21200.05101000000000
.........TGGGAAGGATCGTCGCGACGCACGCA..............................................................................................................................................................................................................................................................................................................................................26200.05100000010000
....................GTCGCGACGCACGCAGGAGAGGACG....................................................................................................................................................................................................................................................................................................................................25200.05100100000000
...................CGTCGCGACGCACGCAGGAGAGGACG....................................................................................................................................................................................................................................................................................................................................26200.05100000000001
..................TCGTCGCGACGCACGCAGGAGAGG.......................................................................................................................................................................................................................................................................................................................................24200.05100010000000
..........................................................................................TCCGGAGGGCGATCCACAAGCTGG...............................................................................................................................................................................................................................................................24200.05101000000000
...............................................................................TGGAGCCATCTTCCGGAGGG..............................................................................................................................................................................................................................................................................20200.05100100000000
.............AAGGATCGTCGCGACGCACGCAGGT...........................................................................................................................................................................................................................................................................................................................................25200.05101000000000
...............................................................................................................................................................................................................................................................................................................................................TAAGTTAGTTT-AGGG-CGAAGG...........21200.05100100000000
...........................CGCACGCAGGAGAGGACGGCAAGGTCA...........................................................................................................................................................................................................................................................................................................................27200.05101000000000
..........................................................................................................................................................................................................................................................................................................................................TAGTGTAAGTTAGTTT-AGGG-CG...............22200.05100000010000
............................................................................TGATGGAGCCATCTTCCGGAGGG..............................................................................................................................................................................................................................................................................23200.05100010000000
....................................................................................................................................................................................................................................................................................................................................................TAGTTT-AGGG-CGAAGGCGGGAGCA...24200.05101000000000
.......................................................................................TCTTCCGGAGGGCGATCCACAAGCT.................................................................................................................................................................................................................................................................25200.05100100000000
............................GCACGCAGGAGAGGACGGCAAGGTC............................................................................................................................................................................................................................................................................................................................25200.05101000000000
..............................................................GACCTTAGGAGGAGTGATGGAGC............................................................................................................................................................................................................................................................................................23200.05100100000000
...............................................................ACCTTAGGAGGAGTGATGGAGCC...........................................................................................................................................................................................................................................................................................23200.05100100000000
.....................TCGCGACGCACGCAGGAGAGGACGGCA.................................................................................................................................................................................................................................................................................................................................27200.05101000000000
......................................................................................................TCCACAAGCTGGCGCCG--CTG.....................................................................................................................................................................................................................................................20200.05101000000000
droEre2
AGTGGCTGCTGGGAAAATTCGTCGCGACGCACGCAGGGGAGGACGGCA---------TCGTCGACCTTAGAAGGAGAGACGG-GCAGTTTTTCGGAGAGCGATCCACAAGCTGGCTCCG--CTGCCAATT-----------GGTTGAAG-CCGT--GGAGGCATTTAATGGGGACGG--TGTTAGCTGA---------------------------------------------ATCTATGTTATA-T-AGTTGTT------TATTGGT-TT-----------TTT-TGTCGA-TGTATGAACAAGGACAACATTTTA-------AAGTATAGTGTAAGTTAGTTT-AGTG-CGAAGGCGGGAGCATAASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 06/08/2015 at 03:05 PM