ID:

dpe_682

 Coordinate:

scaffold_111:107613-107763 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-3.3 -3.3 -3.3 -3.3

Flybase annnotation

CDS [Dper\GL24712-cds]; exon [dper_GLEANR_7030:2]; intron [Dper\GL24712-in]

No Repeatable elements found

mature
  1. scaffold_111:99947-99973 +
  2. dpe_682  scaffold_111:107705-107731 +
star
  1. scaffold_111:99919-99940 +
  2. dpe_682  scaffold_111:107677-107698 +
  3. scaffold_71:84386-84407 -
  4. scaffold_71:146341-146362 -
  5. scaffold_2:415816-415837 +
  6. scaffold_57:217057-217078 +
  7. scaffold_869:6241-6262 +
  8. scaffold_1439:1907-1928 -

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TATGTTTTAAAACGTTGACTTTCTACAGAGCTGCTGCGCTCTCCCGCTAAAGGGGCTCTCTGCCGCCGCACTTCTGTAATTACCTTGATCTGCCGCCGCCACTTCGGCAATCACTTTGATCTGACGCCGTCGTCTATTTTAGTTCCATGTTAACCCCTCTGCGCATTGGTTGCATACTTATCTCTTACCTTTTCCTGCCAGAAAATGGAGCGATTGGAATATGCTACAGCGACACACGCTAGTAGCGATCA
******************************************************************************************************************((.....((.(((.................................)))))..))********************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 V057
head
........................................................................................................................................................................................................................GAATATGCTACAGCGACACACGC............ 23 0 20 0.75 15 15 0
..............................................................................................................................................TTCCATGTTAACCCCTCTGCGCATTGG.................................................................................. 27 0 2 0.50 1 1 0
...............................................................................................................................................TCCATGTTAACCCCTCTGCGCATTG................................................................................... 25 0 2 0.50 1 1 0
........................................................................................................................................................................................................................GAATATGCTACAGCGACACACGCTAG......... 26 0 20 0.50 10 10 0
.......................TACAGAGCTGCTGCGCTCTCCCGCT........................................................................................................................................................................................................... 25 0 5 0.40 2 2 0
........................................................................................................................................................................................................................GAATATGCTACAGCGACACACG............. 22 0 20 0.40 8 8 0
..................................................................................................................TTTGATCTGACGCCGTCGTCTA................................................................................................................... 22 0 8 0.25 2 2 0
..............................................................................................................................................................................TACTTATCTCTTACCTTTTCCTGCCA................................................... 26 0 4 0.25 1 1 0
.................................................................................................................................................................................TTATCTCTTACCTTTTCCTGCCA................................................... 23 0 4 0.25 1 1 0
...................................................................................CTTGATCTGCCGCCGCCACTTCGG................................................................................................................................................ 24 0 12 0.25 3 3 0
...................................................................................CTTGATCTGCCGCCGCCACTTCGGCAA............................................................................................................................................. 27 0 8 0.25 2 2 0
.............GTTGACTTACTACAGAGCTGCTGCGC.................................................................................................................................................................................................................... 26 1 5 0.20 1 1 0
...............TGACTTTCTACAGAGCTGCTGCGCTC.................................................................................................................................................................................................................. 26 0 5 0.20 1 1 0
.....................TCTACAGAGCTGCTGCGCTCTCCCGC............................................................................................................................................................................................................ 26 0 5 0.20 1 1 0
.......................TACAGAGCTGCTGCGCTCTCCCGC............................................................................................................................................................................................................ 24 0 5 0.20 1 1 0
..................................................................................................................TTTGATCTGACGCCGTCCTCTATT................................................................................................................. 24 1 7 0.14 1 1 0
..................................................................................................................TTTGATCTGACGCCGTCGTCTATT................................................................................................................. 24 0 7 0.14 1 1 0
..................................................................................................................TTTGATCTGACGCCGTCGTCTAT.................................................................................................................. 23 0 8 0.13 1 1 0
.......................................TCTCCCGCTAAAGGGGCTCTCTGCC........................................................................................................................................................................................... 25 0 20 0.10 2 2 0
...........................................................................................................................................................................................................................TATGCTACAGCGACACACGCTAGTAG...... 26 0 20 0.10 2 2 0
...............................TGCTGCGCTCTCCCGCTAAAGG...................................................................................................................................................................................................... 22 0 20 0.10 2 2 0
...................................................................................CTTGATCTGCCGCCGCCACTTCG................................................................................................................................................. 23 0 13 0.08 1 1 0
....................................................................................TTGATCTGCCGCCGCCACTTCGGC............................................................................................................................................... 24 0 15 0.07 1 1 0
.....................................................................................................................................................................................................................TTGGAATATGCTACAGCGACACAC.............. 24 0 20 0.05 1 1 0
................................................................................................................................................................................................................AGCGATTGGAATATGCTACAGCGACAC................ 27 0 20 0.05 1 1 0
........................................................................................................................................................................................................................GAATATGCTACAGCGACAA................ 19 1 20 0.05 1 1 0
....................................................................................................................................................................................................................ATTGGAATATGCTACAGCGAC.................. 21 0 20 0.05 1 1 0
.......................................TCTCCCGCTAAAGGGGCTCTCTGCCG.......................................................................................................................................................................................... 26 0 20 0.05 1 1 0
..........................................CCCGCTAAAGGGGCTCTCTGCC........................................................................................................................................................................................... 22 0 20 0.05 1 1 0
................................................................................................................................................................................................................................TACAGCGACACACGCTAGTAGCGAT.. 25 0 20 0.05 1 1 0
.......................................................................................................................................................AACCCCTCTGCGCATTGGT................................................................................. 19 0 20 0.05 1 1 0
........................................................................................TCTGCCGCCGCCACTTCGGCAAA............................................................................................................................................ 23 1 20 0.05 1 1 0
.....................................................................................................CTTCGGCAATCACTTTGATCT................................................................................................................................. 21 0 20 0.05 1 0 1
.....................................................................................................................................................................................................................TTGGAATATGCTACAGCGACACACG............. 25 0 20 0.05 1 1 0

Anti-sense strand reads

ATACAAAATTTTGCAACTGAAAGATGTCTCGACGACGCGAGAGGGCGATTTCCCCGAGAGACGGCGGCGTGAAGACATTAATGGAACTAGACGGCGGCGGTGAAGCCGTTAGTGAAACTAGACTGCGGCAGCAGATAAAATCAAGGTACAATTGGGGAGACGCGTAACCAACGTATGAATAGAGAATGGAAAAGGACGGTCTTTTACCTCGCTAACCTTATACGATGTCGCTGTGTGCGATCATCGCTAGT
**********************************************************************************((.....((.(((.................................)))))..))****************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 V111
male body		 V057
head
................................................TTCCCCCGAGGGACAGCGGCGTG.................................................................................................................................................................................... 23 3 4 0.50 2 0 2 0
.....................................................................................................GAAGCCGTTAGTGAAACTAGACT............................................................................................................................... 23 0 7 0.43 3 3 0 0
..................................................................................................GGTGAAGCCGTTAGTGAAACTAGACT............................................................................................................................... 26 0 7 0.29 2 2 0 0
.........TTTGCAACTGAAAGATGTCTCGAC.......................................................................................................................................................................................................................... 24 0 4 0.25 1 1 0 0
................CTGAAATATGTCTCGACGA........................................................................................................................................................................................................................ 19 1 5 0.20 1 0 0 1
.........................................................................................................CCGTTAGTGAAACTAGACTGC............................................................................................................................. 21 0 7 0.14 1 1 0 0
..........................................................................................................................................................................................................TTTACCTCGCTAACCGTATACGAT......................... 24 1 20 0.10 2 2 0 0
.................................................................................................................................................GTTCAATTGGGGTGACGAG....................................................................................... 19 3 12 0.08 1 0 0 1
...................................................................................................................................................CCAATTGGGCAGACGCGAA..................................................................................... 19 3 13 0.08 1 0 0 1
................................................................................................................................................................................................................ACGCTAACCTTATACGATGTCGCTGTG................ 27 1 20 0.05 1 1 0 0
..............................................................................................................................................................................................................................CGATGTCGCTGTGTGCGATCA........ 21 0 20 0.05 1 0 1 0
...........................................................................................................................................................................................................TTACCTCGCTAACCTTATACGATGTCGCT................... 29 0 20 0.05 1 1 0 0
..................................................................................................................................................................................................................................GTCGCTGTGTGCGATCATCGC.... 21 0 20 0.05 1 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_111:107563-107813 + dpe_682 TATGTTTTAAAACGTTGACTTTCTACAGAGCTGCTGCGCTCTCCCGCTAAAGGGGCTCTCTGCCGCCGC-ACTTCTGTAATTACCTTGATCTGCCGCCGCCACTTCGGCAATCACTTTGATCTGACGCCGTCGTCTAT--TTTAGTTCCATGTTAACCCCTCTGCGCATTGGTTGCATACTTATCTCT---TACCTTTTCCT---GCCAGAAAATGGAGC-GATTGGAATATGCTACAGCGAC---ACACGCTAGTAGCGATCA
dp5 Unknown_singleton_2959:223-470 - TATGTTGTAAAATGTAGACTTTCTGCAGAGCTGCTGCGCTCTCCCGCTAAAGGGGCTCTCTGCCGCCGCCACTTCGGCAATTACTTTGATCTGCTGCCGCCACTTCGGCAGTCACTTTGATCT---GTCGTCGTCTATAATTTAGTTCTATGCTAACCCCTCTGCGCATTGGTTGCATATCGATCTCGCATAAATTTTATCTGGCAATAGC-----AAGC-AATCGGCTTACGCTA-----AGCCACCAA--GACTAAAAACGA
droVir3 scaffold_12875:16985915-16985976 - TTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCGT---TAGCTTGTGCT---ATTATAAAACAGCGC-GCTTTGCATATGCCACACACAC---ACAC------------GC
droMoj3 scaffold_6680:18361479-18361503 + AATAAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGCACGTTGAACTTTTA
droGri2 scaffold_3125:5987-6042 + T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCAGAAGTTAGAGA-GCCTGGAGCATGCAATGGGATA---TCATTCTTTTAAATCTCA
droAna3 scaffold_12902:14368-14423 + T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCGGAGTTTAGAGA-GCATGGATTTGCTCACGACAAC---ACATGCACCAAACTTTGT
droBip1 scf7180000395962:65341-65398 + CTG-------------------------------------------------------------------------------------------------------------------------TCGCCGTCGCTCAT--TTGAGTCACATTTTATTATTTTCGTGCATTTATC-----------------------------------------------------------------------------------GTATACT
droKik1 scf7180000302727:14770-14825 - T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCGCATGATGGAAA-ATTTGGAATACGCTATGGTAAA---CCAAGCACCTAGCAAACA
droFic1 scf7180000453797:6773-6828 - T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGAACATTGGAGA-CTATGGATTTTGCCATGGCAAA---CTATGCGTCTGGCGATCA
droEle1 scf7180000491259:36923-36978 + T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCGAAAACTGGAGA-ACCTTTAACATGCCATGGGGAG---TTATACCTCAAAGTGTCA
droRho1 scf7180000771679:10431-10485 - T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCAGCGCCTGGAAA-CTATGGAACATGCCACA-TGCC---ACATGCTACTAACTATAG
droBia1 scf7180000301846:6678-6733 + T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCGCATGATGGAAA-ATTTGGAATACGCTACGGTAAA---CCAAGCACCTAGCAAACA
droTak1 scf7180000414108:13692-13747 + T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCGCATGATGGAAA-ATTTGGAATACGCTATGGTAAA---CCAAGCACCTAGCAAACA
droEug1 scf7180000408749:22203-22274 + ATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCT---TAATATTCGGT---GCCGCATGATGGAGG-ATTTGGAATACGCTATGGTAGA---CAACTAAGGTTGCAAACA
dm3 chr3L:24354137-24354188 - A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G----AAAATTGGAAGCCGT-GGATACGCTATGGCAAC---TTACACGCCAGGCGTCCA
droSim2 2r:1967934-1967979 + T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAGG-CCGTGGATTGCGCCATGGCAAC---CTATGCGCCAGGCGTTCA
droSec2 scaffold_2292:1030-1076 - T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAGG-CCGTGGATTGCGCCATGGCAAC-C-CTATGCGCCAGGCGTTCA
droYak3 v2_chrUn_6571:330-375 + T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAGG-CCGTGGATTGCGCCATGGCAAC---CTATGCGCTAGGCGTTCA
droEre2 scaffold_1357:1352-1407 + T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCGAATGATGGAAA-ATTTGGAAAATGCTGTGGTAAC---CCAAACATCCAGCGCTCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
TATGTTTTAAAACGTTGACTTTCTACAGAGCTGCTGCGCTCTCCCGCTAAAGGGGCTCTCTGCCGCCGC-ACTTCTGTAATTACCTTGATCTGCCGCCGCCACTTCGGCAATCACTTTGATCTGACGCCGTCGTCTAT--TTTAGTTCCATGTTAACCCCTCTGCGCATTGGTTGCATACTTATCTCT---TACCTTTTCCT---GCCAGAAAATGGAGC-GATTGGAATATGCTACAGCGAC---ACACGCTAGTAGCGATCASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................................................................................................................................................................................................................................GAATATGCTACAGCGAC---ACACGC............23200.75150150000
.................................................................................................................................................TTCCATGTTAACCCCTCTGCGCATTGG............................................................................................2720.501010000
..................................................................................................................................................TCCATGTTAACCCCTCTGCGCATTG.............................................................................................2520.501010000
..................................................................................................................................................................................................................................GAATATGCTACAGCGAC---ACACGCTAG.........26200.50100100000
.......................TACAGAGCTGCTGCGCTCTCCCGCT........................................................................................................................................................................................................................2550.402020000
..................................................................................................................................................................................................................................GAATATGCTACAGCGAC---ACACG.............22200.408080000
...................................................................................................................TTTGATCTGACGCCGTCGTCTA...............................................................................................................................2280.252020000
.................................................................................................................................................................................TACTTATCTCT---TACCTTTTCCT---GCCA.......................................................2640.251010000
....................................................................................................................................................................................TTATCTCT---TACCTTTTCCT---GCCA.......................................................2340.251010000
....................................................................................CTTGATCTGCCGCCGCCACTTCGG............................................................................................................................................................24120.253030000
....................................................................................CTTGATCTGCCGCCGCCACTTCGGCAA.........................................................................................................................................................2780.252020000
...............TGACTTTCTACAGAGCTGCTGCGCTC...............................................................................................................................................................................................................................2650.201010000
.....................TCTACAGAGCTGCTGCGCTCTCCCGC.........................................................................................................................................................................................................................2650.201010000
.......................TACAGAGCTGCTGCGCTCTCCCGC.........................................................................................................................................................................................................................2450.201010000
...................................................................................................................TTTGATCTGACGCCGTCGTCTAT--T...........................................................................................................................2470.141010000
...................................................................................................................TTTGATCTGACGCCGTCGTCTAT--............................................................................................................................2380.131010000
.......................................TCTCCCGCTAAAGGGGCTCTCTGCC........................................................................................................................................................................................................25200.102020000
.....................................................................................................................................................................................................................................TATGCTACAGCGAC---ACACGCTAGTAG......26200.102020000
...............................TGCTGCGCTCTCCCGCTAAAGG...................................................................................................................................................................................................................22200.102020000
....................................................................................CTTGATCTGCCGCCGCCACTTCG.............................................................................................................................................................23130.081010000
.....................................................................................TTGATCTGCCGCCGCCACTTCGGC...........................................................................................................................................................24150.071010000
...............................................................................................................................................................................................................................TTGGAATATGCTACAGCGAC---ACAC..............24200.051010000
.........................................................................................................................................................................................................................AGC-GATTGGAATATGCTACAGCGAC---AC................27200.051010000
..................................................................................................................................................................................................................................GAATATGCTACAGCGAC---AA................19200.051010000
..............................................................................................................................................................................................................................ATTGGAATATGCTACAGCGAC---..................21200.051010000
.......................................TCTCCCGCTAAAGGGGCTCTCTGCCG.......................................................................................................................................................................................................26200.051010000
..........................................CCCGCTAAAGGGGCTCTCTGCC........................................................................................................................................................................................................22200.051010000
..........................................................................................................................................................................................................................................TACAGCGAC---ACACGCTAGTAGCGAT..25200.051010000
..........................................................................................................................................................AACCCCTCTGCGCATTGGT...........................................................................................19200.051010000
.........................................................................................TCTGCCGCCGCCACTTCGGCAAA........................................................................................................................................................23200.051010000
......................................................................................................CTTCGGCAATCACTTTGATCT.............................................................................................................................................21200.051000010
...............................................................................................................................................................................................................................TTGGAATATGCTACAGCGAC---ACACG.............25200.051010000
dp5
TATGTTGTAAAATGTAGACTTTCTGCAGAGCTGCTGCGCTCTCCCGCTAAAGGGGCTCTCTGCCGCCGCCACTTCGGCAATTACTTTGATCTGCTGCCGCCACTTCGGCAGTCACTTTGATCT---GTCGTCGTCTATAATTTAGTTCTATGCTAACCCCTCTGCGCATTGGTTGCATATCGATCTCGCATAAATTTTATCTGGCAATAGC-----AAGC-AATCGGCTTACGCTA-----AGCCACCAA--GACTAAAAACGASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......................................................................................................................................................................................................TCTGGCAATAGC-----AAGC-AATCGGCT...................................24208.801760142000016000
.....................................................................................................................................................................................................TATCTGGCAATAGC-----AAGC-AATCGGC....................................25206.00120000000001200
...................................................................................................................................................................................................TTTATCTGGCAATAGC-----AAGC-AATCGGC....................................27205.05101000000001010
...................................................................................................................................................................................................TTTATCTGGCAATAGC-----AAGC-AATCGG.....................................26203.9078020000015610
....................................................................................................................................................................................................TTATCTGGCAATAGC-----AAGC-AATCGG.....................................25203.50700120000012460
.....TGTAAAATGTAGACTTTCTGCAGAGC.........................................................................................................................................................................................................................................2622.0040000000220
....................................................................................................................................................................................................TTATCTGGCAATAGC-----AAGC-AATCGGC....................................26201.653301010003100
....................TTCTGCAGAGCTGCTGCGCTCTCCCG..........................................................................................................................................................................................................................26200.951901900000000
.....................................................................................................................................................................................................TATCTGGCAATAGC-----AAGC-AATCGGCT...................................26200.701400000000140
...................TTTCTGCAGAGCTGCTGCGCTT...............................................................................................................................................................................................................................22200.701401400000000
.......................................................................................................................................................................................TCTCGCATAAATTTTATCTGGCAATAG......................................................27130.5470600000100
.....................................................................................................................................................................................................TATCTGGCAATAGC-----AAGC-AATCGG.....................................24200.50100400000600
...................TTTCTGCAGAGCTGCTGCGCTCTCCC...........................................................................................................................................................................................................................26200.501001000000000
.......TAAAATGTAGACTTTCTGCAGAGCTGC......................................................................................................................................................................................................................................2720.5010000000010
..TGTTGTAAAATGTAGACTTTCTGC..............................................................................................................................................................................................................................................2420.5010000000010
.........................................................................................................................................................TAACCCCTCTGCGCATTGGTTG.........................................................................................22200.4590900000000
......................................................................................TGATCTGCTGCCGCCACTTCGGCA..........................................................................................................................................................24200.3570700000000
...............AGACTTTCTGCAGAGCTGCTG....................................................................................................................................................................................................................................2130.3310000000010
.......................................................................................................................................................................................................TCTGGCAATAGC-----AAGC-AATCGGCTC..................................25200.3060000000060
...................................................................................................................................................................................................TTTATCTGGCAATAGC-----AAGC-AATCGGCT...................................28200.3060000000600
.......................................................................................................................................................................................................TCTGGCAATAGC-----AAGC-AATCGG.....................................22200.3060000001500
....................................................................................TTTGATCTGCTGCCGCCACTTCG.............................................................................................................................................................23200.2550000005000
..................................................................................................................................................................................................TTTTATCTGGCAATAGC-----AAGC-AATCGG.....................................27120.2530100000020
..................................................................................................................................................................................................TTTTATCTGGCAATAGC-----AAGC-AATCGGC....................................28120.2530000000030
....................................................................................TTTGATCTGCTGCCGCCACTTCGG............................................................................................................................................................24200.2550000000500
.........................................................................................................................................................................TGGTTGCATATCGATCTCGCATAAATT....................................................................27170.2440000001030
....................................................................................................................................................................................................TTATCTGGCAATAGC-----AAGC-AATCG......................................24200.2040000000040
.........................................TCCCGCTAAAGGGGCTCTCTGCCGCC.....................................................................................................................................................................................................26200.2040400000000
...................................................................................................................................................................................................TTTATCTGGCAATAGC-----AAGC-AAT........................................23200.2040000000040
.............................................................................................................................................................................TGCATATCGATCTCGCATAAATTTTA.................................................................26190.1630000000030
.........................................................................................................................................................................................TCGCATAAATTTTATCTGGCAATAG......................................................25130.1520000000200
.......................................................................................................................................................................................TCTCGCATAAATTTTATCTGGCAAT........................................................25130.1520200000000
......................................................................................................................................................................................ATCTCGCATAAATTTTATCTGGCAAT........................................................26130.1520000000020
.......................................................................................................................................................................................TCTCGCATAAATTTTATCTGGCAA.........................................................24130.1520200000000
.......................................................................................................................................................................................TCTCGCATAAATTTTATCTGGCA..........................................................23130.1520200000000
....................................................................................................................................................................................................TTATCTGGCAATAGC-----AAGC-AATCC......................................24200.1530000000300
...................................................................................................................................................................................................TTTATCTGGCAATAGC-----AAGC-AATCG......................................25200.1530000000120
..................................................................................................................................................................TGCGCATTGGTTGCATATCGATCTC.............................................................................25200.1530300000000
.........................................................................................................................................................................TGGTTGCATATCGATCTCGCATAA.......................................................................24200.1530000000030
...............................................TAAAGGGGCTCTCTGCCGCCGCCAC................................................................................................................................................................................................25200.1530300000000
.......................................TCTCCCGCTAAAGGGGCTCTCTGCC........................................................................................................................................................................................................25200.1020200000000
.......................................................................................................................................................................................TCTCGCATAAATTTTATCTGGC...........................................................22200.1020200000000
.....................TCTGCAGAGCTGCTGCGCTCTCCCG..........................................................................................................................................................................................................................25200.1020200000000
................................................................................................................................................................TCTGCGCATTGGTTGCATATC...................................................................................21200.1020200000000
............................................................................................................................................................CCCCTCTGCGCATTGGTTGCATATCGA.................................................................................27200.1020000000200
.........................................................................TCGGCAATTACTTTGATCTGCTGC.......................................................................................................................................................................24200.1020000000020
...................TTTCTGCAGAGCTGCTGCGCTCA..............................................................................................................................................................................................................................23200.1020200000000
................................................................................................................................................................TCTGCGCATTGGTTGCATATCGATC...............................................................................25200.1020000002000
.......................TGCAGAGCTGCTGCGCTCTCCCGC.........................................................................................................................................................................................................................24200.1020200000000
..................................................................................................................................................................................................TTTTATCTGGCAATAGC-----AAGC-AATCG......................................26120.0810100000000
.......................................................................................................................................................................................TCTCGCATAAATTTTATCTGGCAATA.......................................................26130.0810100000000
.......................................................................................................................................................................................TCTCGCATAAATTTTATCTGGCAATT.......................................................26130.0810010000000
........................................................................................................................................................................................CTCGCATAAATTTTATCTGGCAA.........................................................23130.0810100000000
.................................................................................................................................................................................................ATTTTATCTGGCAATAGC-----AAGC-...........................................22130.0810010000000
......................................................................................................................................................................................ATCTCGCATAAATTTTATCTGGCAA.........................................................25130.0810100000000
......................................................................................................................................................................................ATCTCGCATAAATTTTATCTGGCA..........................................................24130.0810100000000
.........................................................................................................................................................................TGGTTGCATATCGATCTCGCATAAATTT...................................................................28160.0610100000000
.............................................................................................................................................................................TGCATATCGATCTCGCATAAATTT...................................................................24190.0510100000000
..................................................................CGCCACTTCGGCAATTACTTTGATC.............................................................................................................................................................................25200.0510100000000
.................................................................................................................................................................................TATCGATCTCGCATAAATTTTATC...............................................................24200.0510000000010
........................................CTCCCGCTAAAGGGGCTCTCTG..........................................................................................................................................................................................................22200.0510100000000
.......................................................................................................................................................................................................TCTGGCAATAGC-----AAGC-AATCGGCTA..................................25200.0510100000000
.......................................TCTCCCGCTAAAGGGGCTCTCTGCA........................................................................................................................................................................................................25200.0510100000000
...................................................................................................................................................................................................TTTATCTGGCAATAGC-----AAGC-AATC.......................................24200.0510000000010
....................TTCTGCAGAGCTGCTGCGCTC...............................................................................................................................................................................................................................21200.0510000100000
.......................TGCAGAGCTGCTGCGCTCTCCCC..........................................................................................................................................................................................................................23200.0510100000000
..................CTTTCTGCAGAGCTGCTG....................................................................................................................................................................................................................................18200.0510100000000
....................................................................................................................................................................................................TTATCTGGCAATAGC-----AAGC-AATCGGG....................................26200.0510000000100
.......................................................CTCTCTGCCGCCGCCACTTCGGC..........................................................................................................................................................................................23200.0510100000000
.....................................................................................................................................................................................................TATCTGGCAATAGC-----AAGC-AATCGGCTA..................................27200.0510000000100
..............................................................................................................................................TAGTTCTATGCTAACCCCTCTG....................................................................................................22200.0510000000010
.....................................................................................................................................................................................................TATCTGGCAATAGC-----AAGC-AATCGGCTC..................................27200.0510000000010
.........................................................................................TCTGCTGCCGCCACTTCGGCAGTCACT....................................................................................................................................................27200.0510100000000
....................................................................................TTTGATCTGCTGCCGCCACTT...............................................................................................................................................................21200.0510000001000
....................TTCTGCAGAGCTGCTGCGCTCTCCCGCTA.......................................................................................................................................................................................................................29200.0510100000000
........................................................................TTCGGCAATTACTTTGATCTGCTG........................................................................................................................................................................24200.0510100000000
...............................TGCTGCGCTCTCCCGCTAAAGGGGCTC..............................................................................................................................................................................................................27200.0510100000000
......................................................................................................................................................TGCTAACCCCTCTGCGCATTGG............................................................................................22200.0510100000000
.........................................................................................................................................................................TGGTTGCATATCGATCTCGCA..........................................................................21200.0510100000000
...................TTTCTGCAGAGCTGCTGCGCTC...............................................................................................................................................................................................................................22200.0510000000010
.........................................................................................................................................................................TGGTTGCATATCGATCTCGCATAAAA.....................................................................26200.0510100000000
.....................................................................................................................................................................GCATTGGTTGCATATCGATCTCGCA..........................................................................25200.0510100000000
...................................................................................................................................................................................................TTTATCTGGCAATAGC-----AAGC-AATCGGT....................................27200.0510000000010
...................................................................................................................................................................................................TTTATCTGGCAATAGC-----AAGC-AATCGGCTC..................................29200.0510000000010
........................................................................................ATCTGCTGCCGCCACTTCGGC...........................................................................................................................................................21200.0510100000000
.............................................................................CAATTACTTTGATCTGCTGCCGCCACT................................................................................................................................................................27200.0510000000100
............................................CGCTAAAGGGGCTCTCTGCCGCCG....................................................................................................................................................................................................24200.0510100000000
........................................................................................................................................................................................................CTGGCAATAGC-----AAGC-AATCGG.....................................21200.0510000000010
...................TTTCTGCAGAGCTGCTGCGCTTG..............................................................................................................................................................................................................................23200.0510100000000
.....................................................................CACTTCGGCAATTACTTTGATCTGC..........................................................................................................................................................................25200.0510100000000
....................TTCTGCAGAGCTGCTGCGCTCT..............................................................................................................................................................................................................................22200.0510000100000
...................TTTCTGCAGAGCTGCTGCGCTCTCC............................................................................................................................................................................................................................25200.0510000000010
................................GCTGCGCTCTCCCGCTAAAGGGGCTC..............................................................................................................................................................................................................26200.0510100000000
............................................CGCTAAAGGGGCTCTCTGCCGCA.....................................................................................................................................................................................................23200.0510100000000
.........................................................................................TCTGCTGCCGCCACTTCGGC...........................................................................................................................................................20200.0510100000000
...............................................................................................GCCGCCACTTCGGCAGTCACTTTGATC..............................................................................................................................................27200.0510100000000
.....................................................................................TTGATCTGCTGCCGCCACTTCGGCAGTT.......................................................................................................................................................28200.0510100000000
..........................................................TCTGCCGCCGCCACTTCGGCAATT......................................................................................................................................................................................24200.0510100000000
........................................................TCTCTGCCGCCGCCACTTCGGCAAT.......................................................................................................................................................................................25200.0510100000000
........................................................................................ATCTGCTGCCGCCACTTCGGCAGTC.......................................................................................................................................................25200.0510000010000
.........................................................................................................................................................................................................TGGCAATAGC-----AAGC-AATCGGCT...................................22200.0510000100000
................................................................................................................................................................TCTGCGCATTGGTTGCATATCGAT................................................................................24200.0510100000000
.........................................................................................................................................................................................................TGGCAATAGC-----AAGC-AATCGGC....................................21200.0510001000000
....................................................................................................................................................TATGCTAACCCCTCTGCGA.................................................................................................19200.0510000000100
....................................................................................................................................................TATGCTAACCCCTCTGCGC.................................................................................................19200.0510010000000
..................................................................CGCCACTTCGGCAATTACTTTGATCTGCT.........................................................................................................................................................................29200.0510100000000
.........................................................................................TCTGCTGCCGCCACTTCGGCAGTC.......................................................................................................................................................24200.0510100000000
......................................................................................................................................................................CATTGGTTGCATATCGATCTCGCA..........................................................................24200.0510000000100
....................................................................CCACTTCGGCAATTACTTTGATCTGC..........................................................................................................................................................................26200.0511000000000
.......................................................................................................................................................................................TCTCGCATAAATTTTATCTGG............................................................21200.0510100000000
.......................TGCAGAGCTGCTGCGCTCT..............................................................................................................................................................................................................................19200.0510100000000
............................AGCTGCTGCGCTCTCCCGCTAAAGGGGCC...............................................................................................................................................................................................................29200.0510001000000
..................CTTTCTGCAGAGCTGCTGCGC.................................................................................................................................................................................................................................21200.0510100000000
.................................................................................................................................................TTCTATGCTAACCCCTCTGC...................................................................................................20200.0510100000000
...................................................................................CTTTGATCTGCTGCCGCCACTTCGGCAGT........................................................................................................................................................29200.0510100000000
droVir3
TTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCGT---TAGCTTGTGCT---ATTATAAAACAGCGC-GCTTTGCATATGCCACACACAC---ACAC------------GCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
AATAAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGCACGTTGAACTTTTASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCAGAAGTTAGAGA-GCCTGGAGCATGCAATGGGATA---TCATTCTTTTAAATCTCASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCGGAGTTTAGAGA-GCATGGATTTGCTCACGACAAC---ACATGCACCAAACTTTGTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
CTG-------------------------------------------------------------------------------------------------------------------------TCGCCGTCGCTCAT--TTGAGTCACATTTTATTATTTTCGTGCATTTATC-----------------------------------------------------------------------------------GTATACTSizeHit CountTotal NormTotal
No Reads
droKik1
T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCGCATGATGGAAA-ATTTGGAATACGCTATGGTAAA---CCAAGCACCTAGCAAACASizeHit CountTotal NormTotal
No Reads
droFic1
T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGAACATTGGAGA-CTATGGATTTTGCCATGGCAAA---CTATGCGTCTGGCGATCASizeHit CountTotal NormTotal
No Reads
droEle1
T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCGAAAACTGGAGA-ACCTTTAACATGCCATGGGGAG---TTATACCTCAAAGTGTCASizeHit CountTotal NormTotal
No Reads
droRho1
T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCAGCGCCTGGAAA-CTATGGAACATGCCACA-TGCC---ACATGCTACTAACTATAGSizeHit CountTotal NormTotal
No Reads
droBia1
T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCGCATGATGGAAA-ATTTGGAATACGCTACGGTAAA---CCAAGCACCTAGCAAACASizeHit CountTotal NormTotal
No Reads
droTak1
T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCGCATGATGGAAA-ATTTGGAATACGCTATGGTAAA---CCAAGCACCTAGCAAACASizeHit CountTotal NormTotal
No Reads
droEug1
ATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCT---TAATATTCGGT---GCCGCATGATGGAGG-ATTTGGAATACGCTATGGTAGA---CAACTAAGGTTGCAAACASizeHit CountTotal NormTotal
No Reads
dm3
A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G----AAAATTGGAAGCCGT-GGATACGCTATGGCAAC---TTACACGCCAGGCGTCCASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
......................................................................................................................................................................................................................TTGGAAGCCGT-GGATACGCTATGGC........................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................TTGGAAGCCGT-GGATACGCTATGG.........................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000010000000000000000000000000
..........................................................................................................................................................................................................................................TATGGCAAC---TTACACGCCAGGCGTCC.2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................TATGGCAAC---TTACACGCCAGGCGTC..2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................AAATTGGAAGCCGT-GGATACG...............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................AATTGGAAGCCGT-GGATACGCTATG..........................2511.0010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................AAATTGGAAGCCGT-GGATACGCTATGATC.......................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................TTGGAAGCCGT-GGATACGCTATGGCAAA---..................2811.0010000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................TTGGAAGCCGT-GGATACGCTAT...........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................AAAATTGGAAGCCGT-GGATA.................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................AATTGGAAGCCGT-GGATACGCTATGG.........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
droSim2
T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAGG-CCGTGGATTGCGCCATGGCAAC---CTATGCGCCAGGCGTTCASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...........................................................................................................................................................................................................................................ATGGCAAC---CTATGCGCCAGGCGTT..24139.001170000006715341000000
............................................................................................................................................................................................................................................TGGCAAC---CTATGCGCCAGGCGTT..23135.927700000010286321000000
......................................................................................................................................................................................................................................GCGCCATGGCAAC---CTATGCGCC.........22125.4265000065000000000000
............................................................................................................................................................................................................................................TGGCAAC---CTATGCGCCAGGCGT...22134.9264000064000000000000
............................................................................................................................................................................................................................................TGGCAAC---CTATGCGCCAGGCGTTCA25132.46320000001120162010000
..............................................................................................................................................................................................................................CGTGGATTGCGCCATGGCAAC---CTA...............24111.7319000000201510001000
....................................................................................................................................................................................................................................TTGCGCCATGGCAAC---CTATGCGCCAGG......27121.6720000100110800000000
.....................................................................................................................................................................................................................................TGCGCCATGGCAAC---CTATGCGCCAGG......26121.5018000000601110000000
............................................................................................................................................................................................................................................TGGCAAC---CTATGCGCCAGGCGTTC.24131.381800010017180000000
..............................................................................................................................................................................................................................CGTGGATTGCGCCATGGCAAC---CTATG.............26111.091200000050700000000
..........................................................................................................................................................................................................................................CATGGCAAC---CTATGCGCCAGGCGTT..25130.851100000005051000000
T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAGG-CCGTGGATTGCGCCATG..........................23110.73800000000000071000
....................................................................................................................................................................................................................................TTGCGCCATGGCAAC---CTATGCGCCA........25120.58700000000005011000
T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAGG-CCGTGGATTGCGCCATGG.........................24110.55600000000006000000
.................................................................................................................................................................................................................................GGATTGCGCCATGGCAAC---CTATGCGCCA........28100.40400000020200000000
...........................................................................................................................................................................................................................................ATGGCAAC---CTATGCGCCAGGCGTTCA26130.38500000002021000000
T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAGG-CCGTGGATTGCGCCAT...........................22110.36400000010000021000
................................................................................................................................................................................................................................TGGATTGCGCCATGGCAAC---CTATGCGCC.........28100.30300000020100000000
...................................................................................................................................................................................................................................ATTGCGCCATGGCAAC---CTATGCGCCAGG......28120.25300000030000000000
....................................................................................................................................................................................................................................TTGCGCCATGGCAAC---CTATGCGCC.........24120.25300010000001010000
....................................................................................................................................................................................................................................TTGCGCCATGGCAAC---CTATGCGCCAGGA.....28120.25300000030000000000
...........................................................................................................................................................................................................................................ATGGCAAC---CTATGCGCCAGGCGTTC.25130.23300000003000000000
................................................................................................................................................................................................................................TGGATTGCGCCATGGCAAC---CTATGCGCA.........28100.20200000000200000000
.................................................................................................................................................................................................................................GGATTGCGCCATGGCAAC---CTATGCGCC.........27100.20200000000200000000
T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAGG-CCGTGGATTGCGCCATGGCA.......................26100.20200000000101000000
.................................................................................................................................................................................................................................GGATTGCGCCATGGCAAC---CTATGCGC..........26100.20200000000200000000
T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAGG-CCGTGGATTGC................................17110.18200000000002000000
..................................................................................................................................................................................................................................GATTGCGCCATGGCAAC---CTATGCGCCAGG......29120.17200000020000000000
....................................................................................................................................................................................................................................TTGCGCCATGGCAAC---CTATGCGCCAGA......27120.17200000010100000000
.......................................................................................................................................................................................................................GGAGG-CCGTGGATTGCGCCATGG.........................23120.17200000000002000000
.......................................................................................................................................................................................................................GGAGG-CCGTGGATTGCGCCAT...........................21120.17200000000002000000
..........................................................................................................................................................................................................................GG-CCGTGGATTGCGCCA............................17120.17200000000002000000
....................................................................................................................................................................................................................................TTGCGCCATGGCAAC---CTATGCGCCAGGC.....28120.17200010000001000000
..........................................................................................................................................................................................................................................CATGGCAAC---CTATGCGCCAGGCGTTC.26130.15200000000002000000
.................................................................................................................................................................................................................................................AC---CTATGCGCCAGGCGTTCA20140.14200000000002000000
.......................................................................................................................................................................................................................................................TATGCGCCAGGCGTTC.16140.14200000000200000000
.................................................................................................................................................................................................................................GGATTGCGCCATGGCAAC---CTATGCGCCAGG......30100.10100000010000000000
..............................................................................................................................................................................................................................CGTGGATTGCGCCATGGCAAC---CTATGCGCCA........31100.10100000010000000000
T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAGG-CCGTGGATTGCGCCATGGCAA......................27100.10100000000100000000
................................................................................................................................................................................................................................TGGATTGCGCCATGGCAAC---CTATGCGCCAGG......31100.10100000010000000000
..............................................................................................................................................................................................................................CGTGGATTGCGCCATGGCAAC---CTATGCGTT.........30100.10100000000100000000
................................................................................................................................................................................................................................TGGATTGCGCCATGGCAAC---CTATGCGC..........27100.10100000010000000000
..............................................................................................................................................................................................................................CGTGGATTGCGCCATGGCAAC---CTAA..............25110.09100000000000010000
..............................................................................................................................................................................................................................CGTGGATTGCGCCATGGCAAC---CT................23110.09100000010000000000
T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAGG-CCGTGGATTGCGCCAA...........................22110.09100000000000010000
T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAGG-CCGTGGATTGCGT..............................19110.09100000000000001000
................................................................................................................................................................................................................................TGGATTGCGCCATGGCAAC---CTATT.............24110.09100000000000001000
...............................................................................................................................................................................................................................GTGGATTGCGCCATGGCAAC---..................20110.09100000000100000000
................................................................................................................................................................................................................................TGGATTGCGCCATGGCAAC---AA................21120.08100000000000010000
....................................................................................................................................................................................................................................TTGCGCCATGGCAAC---CTATGCGCCAGGCGT...30120.08100000000001000000
..................................................................................................................................................................................................................................GATTGCGCCATGGCAAC---CTATGCGCCA........27120.08100000010000000000
...................................................................................................................................................................................................................................ATTGCGCCATGGCAAC---CTATGCGCCA........26120.08100000000001000000
.....................................................................................................................................................................................................................................TGCGCCATGGCAAC---CTATGCGCCAG.......25120.08100000000100000000
.....................................................................................................................................................................................................................................TGCGCCATGGCAAC---CTATGCGCCAGGCGT...29120.08100000000001000000
....................................................................................................................................................................................................................................TTGCGCCATGGCAAC---CTATGCGCCAGGCGTT..31120.08100000000001000000
........................................................................................................................................................................................................................GAGG-CCGTGGATTGC................................15120.08100000000001000000
.........................................................................................................................................................................................................................AGG-CCGTGGATTGCGCCA............................18120.08100000000001000000
.....................................................................................................................................................................................................................................TGCGCCATGGCAAC---CTATGCGCCAGGCG....28120.08100000010000000000
.....................................................................................................................................................................................................................................TGCGCCATGGCAAC---CTATGCGCCAGA......26120.08100000010000000000
..........................................................................................................................................................................................................................GG-CCGTGGATTGCGCCAT...........................18120.08100000000001000000
.......................................................................................................................................................................................................................GGAGG-CCGTGGATTGCGCCATG..........................22120.08100000000001000000
.....................................................................................................................................................................................................................................TGCGCCATGGCAAC---CTATGCGCCAGGC.....27120.08100000000100000000
.......................................................................................................................................................................................................................GGAGG-CCGTGGATTG.................................15120.08100000000001000000
..........................................................................................................................................................................................................................................CATGGCAAC---CTATGCGCCAGGCGTTCA27130.08100000001000000000
............................................................................................................................................................................................................................................TGGCAAC---CTATGCGCCAG.......18130.08100000000001000000
............................................................................................................................................................................................................................................TGGCAAC---CTATGCGCCA........17130.08100000000001000000
...........................................................................................................................................................................................................................................ATGGCAAC---CTATGCG...........15130.08100000000001000000
..........................................................................................................................................................................................................................................CATGGCAAC---CTATGCGCCAGGCGT...24130.08100000000001000000
...........................................................................................................................................................................................................................................ATGGCAAC---CTATGCGCC.........17130.08100000000001000000
............................................................................................................................................................................................................................................TGGCAAC---CTATGCGCCAGGCGTTCG25130.08100000001000000000
....................................................................................................................................................................................................................................TTGCGCCATGGCAAC---CTATGCAA..........23130.08100000000000010000
............................................................................................................................................................................................................................................TGGCAAC---CTATGCGCC.........16130.08100000000001000000
.........................................................................................................................................................................................................................................CCATGGCAAC---CTATGCGCCAGGCGTT..26130.08100000000001000000
..................................................................................................................................................................................................................................................C---CTATGCGCCAGGCGTTC.18140.07100000000001000000
droSec2
T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAGG-CCGTGGATTGCGCCATGGCAAC-C-CTATGCGCCAGGCGTTCASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAGG-CCGTGGATTGCGCCATGGCAAC---CTATGCGCTAGGCGTTCASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................................................................................................................................................................................................................................TGGATTGCGCCATGGCAAC---CTATGC............25200.05100100000000
droEre2
T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCGAATGATGGAAA-ATTTGGAAAATGCTGTGGTAAC---CCAAACATCCAGCGCTCASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 06/08/2015 at 03:04 PM