ID:

dpe_675

 Coordinate:

scaffold_11:2626150-2626300 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-25.5 -25.2 -25.2

Flybase annnotation

CDS [Dper\GL14455-cds]; exon [dper_GLEANR_15140:9]; intron [Dper\GL14455-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TTTGCTCTGTCTCATCCTATCTTTGTCTTCTGCCCCCCAAATTTTCCCTTAACCTTATGATTATTATTATTTGAAATACAATTATAAACTAATGTGATTTCGACATGCAAGTGCACAAGAGTGGAGTTGGTAATAAGACAGGTCCACACAGTCTGATCCTAATACTAATCGGTGCAACCACCATCATTTACTTGTTTGCAGCCCGGGAGCGGCCGAGCGTTAAGATCGAGTCACCATCCCTGCAGACCCAC
**************************************************......(((((....)))))(((((((...((((.....))))...)))))))..(((((....(((((.(((((.(((.........))).))))).......................((((....))))........)))))))))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total M021
embryo
 M042
female body
 V042
embryo
 V111
male body		 V057
head
..........................................................................................................................................................................................................................GTTAAGATCGAGTCACCATCCCTGCAGAC.... 29 0 1 3.00 3 3 0 0 0 0
.....................................................................................................................................................................................................................................GTCACCATCCCTGCAGACC... 19 0 1 2.00 2 2 0 0 0 0
..................................................................................................................................................................................................................................CGAGTCACCATCCCTGCAGACCC.. 23 0 1 2.00 2 2 0 0 0 0
......................................................................................................................................................................................................................GAGCGTTAAGATCGAGTCAC................. 20 0 1 1.00 1 1 0 0 0 0
..................................................................................................................................................CACAGTCTGATCCTAATACT..................................................................................... 20 0 1 1.00 1 1 0 0 0 0
..........................................................................................................................................................................................................................GTTAAGATCGAGTCACCATCCCTGG........ 25 1 1 1.00 1 1 0 0 0 0
.........................................................................................................................................................................................................................CGTTAAGATCGAGTCACCATC............. 21 0 1 1.00 1 1 0 0 0 0
................................................................................................................................................................................................................................ATCGAGTCACCATCCCTGCAG...... 21 0 1 1.00 1 0 1 0 0 0
..............................................................................................................................................................CTAATACTAATCGGTCGA........................................................................... 18 2 4 0.75 3 2 0 1 0 0
..................................................................................................................................................................................................ATTGAACCCCGGGAGCGGCC..................................... 20 3 7 0.29 2 2 0 0 0 0
...............................................................................................................................................................................................................CGTGGCCGAGCGTTAAGG.......................... 18 3 20 0.25 5 0 5 0 0 0
..................................................................................................................................................................................................ATTGAACCCCGGGAGCGGCCGA................................... 22 3 4 0.25 1 1 0 0 0 0
............................................................................................TGTGCTTTCGACAGGCAA............................................................................................................................................. 18 2 5 0.20 1 0 0 1 0 0
.............................................................................................................................................................................................................GCCGTGGCCGAGCGTTAAG........................... 19 3 13 0.08 1 0 0 0 1 0
.............................................................................................................................................................................................................GTCGTGGCCGAGCGTTAAG........................... 19 3 18 0.06 1 0 0 0 1 0
.......................................................................................................CATGCAAGGGCACGTGAGTG................................................................................................................................ 20 3 20 0.05 1 0 0 0 0 1
...............................................................................................................................................................................................................GGTGGCCGAGCGTTAAGG.......................... 18 3 20 0.05 1 0 1 0 0 0

Anti-sense strand reads

AAACGAGACAGAGTAGGATAGAAACAGAAGACGGGGGGTTTAAAAGGGAATTGGAATACTAATAATAATAAACTTTATGTTAATATTTGATTACACTAAAGCTGTACGTTCACGTGTTCTCACCTCAACCATTATTCTGTCCAGGTGTGTCAGACTAGGATTATGATTAGCCACGTTGGTGGTAGTAAATGAACAAACGTCGGGCCCTCGCCGGCTCGCAATTCTAGCTCAGTGGTAGGGACGTCTGGGTG
**************************************************......(((((....)))))(((((((...((((.....))))...)))))))..(((((....(((((.(((((.(((.........))).))))).......................((((....))))........)))))))))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total V111
male body		 M042
female body
 V057
head
............................................TGGGGATTGGAATACTAA............................................................................................................................................................................................. 18 2 3 1.67 5 3 1 1
............................................TGGGGATTGGAATACTAAT............................................................................................................................................................................................ 19 2 2 1.50 3 2 0 1
.............................................GGGGATTGGAATACTAAT............................................................................................................................................................................................ 18 1 1 1.00 1 0 1 0
..............................................GGGATTGGAATACTAATT........................................................................................................................................................................................... 18 2 5 0.60 3 1 1 1
.............................................GGGGATTGGAATACTAATTC.......................................................................................................................................................................................... 20 3 3 0.33 1 0 1 0
..............................................................................................................................................................................................................................TTTAGCGCAGTTGTAGGGA.......... 19 3 14 0.07 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_11:2626100-2626350 + dpe_675 TTTGCTCTGTCTCATCCTATCTTTGTCTT------------------------------C-TGCCCC--------------CCAAATTTTCC--------CT-------TAACC---------------------TTATGATTATTATTATTTGAAATAC----AATT------------------------------------------------------------------------------ATAAACTA----------------------------ATG---------------------------TGATTTCGACATGCA---AGTGCACAAGAGTGGAGTTGGTAATAAGACAGGTCCACACAGTCTGATCCTAATACTAATCGGTGCAACCACCATCATTTACTTGTTTGCAGCCCGGGAGCGGCCGAGCGTTAAGATCGAGTCACCATCCCTGCAGACCCAC
dp5 XL_group3a:2050065-2050315 - dps_2865 TTTGCTCTGTCTCATCCTATCTTTGTCTT------------------------------C-TGCCCC--------------CCAAATTTTCC--------CT-------TAACC---------------------TTATGATTATTATTATTTAAAATAC----AATT------------------------------------------------------------------------------ATAAACTA----------------------------ATG---------------------------TGATTTCGACATGCA---AGTGCACAAGAGTGGAGTTGGTAATAAGACAGGTCCACACAGTCTGATCCTAATACTAATCGGTGCAACCACCATCATTTACTTGTTTGCAGCCCGGGAGCGGCCGAGCGTTAAGATCGAGTCACCATCCCTGCAGACCCAC
droWil2 scf2_1100000004909:12085212-12085415 - TTATT-------------------------------------------------------------------------------------------------ATTTATA---------ATTTGTATTTGTT---------------------T-------------------AA-----A---------------------------------------------------AAT---------------------------------------------------------------TTGATTTGAAATGCATCACTTGCCCAAGCA---AGTGCGCAAAAATGGAGTCGGTAATAAGTCAGGTCCGCACAGTCTGTTACTCATATTAATATGTACCACCACGATCATTTGCTTGCTTGCAGCTCGTGAGCCACCGAGCATTGAAATATCACCAAGGGAGCCACAAACCCAT
droVir3 scaffold_12928:1369130-1369333 - dvi_8444 ATTTATT-----------------------------------------------------------------------------------------------------------------------T--TTAACCATA-----------------------------T------------------------------------------------------------------------------ACATACAA----------------------------ATGTGATATTTAAATATATTT---------TGATTATGCATTGCA---AGTGCACAAGAATGGAGTCGGTAATAAGATAGGTCCGCACAGTCTGATCCTAATACTAATCTGTACAACCACCATAATTTACTTGCTTGCAGCTCGGGAGCGTCCGAGCGTTGATATAATTCCGGCGGCGCCACAGACGTTC
droMoj3 scaffold_6473:13639585-13639855 + TTTGCTCTGTTTCTTCCTT--------------CCC------------------------------AT-------TTGC--------------------------------------------------------------------------------------------------------TTGCCACAATCAAT---------------------TTTGACAATGTTG------GTAAATTAATTGAACTGAAAACAATTTTCCTATGTATATTGATAATTTTAATACT----------TAATAATATATAATTTATAAATGCA---AGTGCACAAGAGTGGAGTCGGTAATAAGACAGGTCCGCACAGTCTGATCCTAATACTAATCTGTACAACCACCATAATTTACTTGATTGCAGCTCGGGAGCGACCGAGCGTTGAGATAGAGCC------AATAAGGACGCTC
droGri2 scaffold_15203:8361784-8362016 + TTCCAT-------------------------------------------------------------------------------------------------------TAACT---------------------ATATAATAAATATTTTTTGATAAATGCATAAATTTTGAATAATCGCAT-------TTGA------------------------------------TATT---------------------------------------------------------------------TCGAATTTATGGTTATGCAATGCA---AGTGCACAAGAACGGAGTCGGTAATAAGACAGGTCCGCACTGTCTGATCCTAATACTAATCTGTACAACCACCATAATTTACTTGCTTGCAGCTCGGGAGGCTCCGAGCGTTGATATAACACCAGCGGTCCCAATGACATTC
droAna3 scaffold_12929:2286997-2287240 - CTTGCT---TCTCCTCTTG---TCGTCTCTCTCCC-CGACACACA------CTTACT-------------------------------------------CT-------T-------AATTTTAATT-------------------------TAAAATTC---------------------------------AAAAAA-----------------------------CATAAT---------------------------------------------------------------CT-ATTTAATGACTA-ACGTTTGCCATGCA---AGTGCACAAGAGTGGAGTCGGTAATAAGATAGGTCCGCACACTCTCATCCTAATACTAATCGGTGCCACCACCATCGTTTGCTTGCTTGCAGCTCGGGAGGCGCCGAGCGTTAAGATAGATAT---GCCCCAGCAGACCCAG
droBip1 scf7180000396434:281038-281306 - CTTGCTCTATCTCGTCCTGTTGTTGTCTCTCTCCC-TGACACACACACACACTGATTATTTTTTCA-------------------------------ATT--A---------------------ATT--TT-----------------------AAACAT----AATT-----------------------TTAAA--------------------------------CATAATTTAAAAAAAAAACTTAA----------------------------------------------------------CTAAACGTTTGCCATGCA---AGTGCACAAGAGTGGAGTCGGTAATAAGATAGGTCCGCACAGTCTGATCCTAATACTAATCGGTGCCACCACCATCGTTTGCTTGCTTGCAGCTCGGGAGGCGCCGAGCGTTAAGATAGATCT---GCCCCAGCAGACCCAG
droKik1 scf7180000302258:515523-515752 - ATTTT-------------------ATTTCTATCAAATCCTAAACC------CTG---------GACC--------------CCC-------C--------AT-------GAACCATTAATTTTAATT-------------------------A------------------------------------------------------------------------------------AAAAAAAAAACAAACAA----------------------------A-----------------------------------AAACACACACTTAGTGCACAAGAGTGGAGTCGGTAATAAGACAGGTCCGCACAATCTGATCCTTATACTAATCGGTGCCACCACCATCGTTTGCTTGTTTGCAGCTCGGGAGCGGCCGAGCATTAAGATAGAATCCGAACCCATCCAGACCGCC
droFic1 scf7180000453927:177232-177510 - TTTGCTCTGTCTCGTCTTG---TTGTTTCTCTTCCCTCACAAACA------CTAATTATC-CGCC---------------------------CGAATATT--ATTTATAT-------CATTTAAATTTG-------------------------CAAA---------------------------------TCAAACCCC--AACCCC--------------------TTTGAT---------------------------------------------------------------CTAAC-TTAAACACAAAACTTTGCCATGCA---AGTGCATAAAAGTGGAGTTGGTAATAAGACAGGTCCGCACAGTCTGATCCTAATACTAATTGGTGCCACCACTGTCGTTTACTTGTTTGCAGCCCGGGAGCGGCCGAGCGTTAAGATCGAACCGCCGCTCCAGCAAACAGTT
droEle1 scf7180000491011:692882-693160 - TTTGCTCTATTTCGTCTTG---TTGTCTCTCTTCCCTCACAAACA------CTGATTATCTTGCCC--------------------------CGAATATT--A---------------------TTA--TT---------------------T-------------------AA-----A----------------CCCTTTAAACCCCTGACCCCACTCTG------TTTGAT---------------------------------------------------------------CTAAATTAAAACTTAAAACTTTGCCATGCA---AGTGCACAAGAGTGGAGTTGGTAATAAGACAGGTCCGCACACTCTGATCCTAATACTAATTGGTGCCACCACTGTCGTTTACTTGTTTGTAGCCCGGGAGCGGCCTAACATTAGGATTCAGCCGGAGACCCAGCAAACAGTT
droRho1 scf7180000779506:483498-483769 - TTTGCTCTATTTCGTCTTG---TTATCTCTCTTCCCTCACAAACA------CTGATTATCTTGCCCCC-------TTACCT-----------CTAATATT--A---------------------TTA--TT---------------------T-------------------AA-----C----------TCCCGA---------------------CTCGA------TTTGAT---------------------------------------------------------------CTAAATTATAACGTACAACTTTGCCATGCA---AGTGCACAAGAGTGGAGTTGGTAATAAGACAGGTCCGCACAGTCTGATCCTAATACTAATTGGTGCCACCACTGTCGTTTACTTGTTTGCAGCCCGGGTGCGGCCGAGCTTAAATATTGAGCCTTCGACCCCGCAAACAGTT
droBia1 scf7180000301760:4789698-4789972 + TTTGCTCTATCTCGTATTG---TTGTCTCTCTTCCCTCACAAACA------CTGATTATCTCGCCCCCCTCCCCCAACCCC-----------CTTTTATT--A---------------------TTT--TT---------------------G-------------------AA-----ACAT-------TTGAAA---------CCC--------------------CTTAAT---------------------------------------------------------------CCGAATTAAAACCCA-AACTTTGCCATGCA---AGTGCACAAGAGTGGAGTTGGTAATAAGACAGGTCCGCACAGTCTGATCCTAATACTAATTGCTGCCACCACTGTGGTTTACTTGTTTGCAGCCCGGGAGCGGCCGAGCATTAGGGTTGAT---GCGCCCCAGCAA-CCGAT
droTak1 scf7180000415151:430677-430940 + TTTGCTCTATTTCGTGTTG---TTGTCTCTCTTCCCTCACAAACA------CTGATTAAT-------------------CC-----------CGAATATT--G---------------------ATT--TT---------------------T-------------------AA-----A-------------AAACCCCAAAACCCCC-----CAAATA-----------TAT---------------------------------------------------------------TT-AATTAAAACCCAACACTTCGCCATGCA---AGTGCACAAGAGTGGAGTTGGTAATAAGACAGGTCCGCACAGTCTTCTCCTAATACTAATTGGTGCCACCACTGTCGTTTACTTGTTTGCAGCCCGGGAGCGGCCGAGTCTTACGATTGATACGGCCACC---CAAAAGGTT
droEug1 scf7180000409277:61682-61962 - TTTGCTGTATTTCATATTG---TT--CTCTCTTCCTTCACAAACACA-----CGATTT-CTTGCCCC--TG-------CCC-----------CAAATATT--T---------------------TTGTGTT---------------------T-------------------AA-----A----------TCCAAACCCCTTAACCCCTTAA----------CC----CCTGAT---------------------------------------------------------------TTCAATTTAAACCCAATACTTCGCCATGCA---AGTGCACAAAAGTGGAGTTGGTAATAAGACAGGTCCGCACAGTCTGATCCTAATACTAATTGGTGCCACCACTGTCGTTTGCTTGTTTGCAGCTCGGGAGCGACCGAGCCTTAAGATTGAGTCGGCGCCCCAGGAACCA--T
dm3 chrX:2376620-2376774 - --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTCGCCATGCA---AGTGCACAAGAGTGGAGTTGGTAATAAGACAGGTCCACACAGTCTGATCCTAATACTAATTGGTGCCACCACTGTGGTTTACTTGCTTGCAGCCCGGGAGCGGCCGAGTGTAAAGATTGTATCGGCGCCCCTGCAAACATTT
droSim2 x:2190961-2191115 - --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTCGCCATGCA---AGTGCACAAGAGTGGAGTTGGTAATAAGACAGGTCCGCACAGTCTGATCCTAATACTAATTGGTGCCACCACTGTGGTTTACTTGCTTGCAGCCCGGGAGCGGCCGAGTGTAAAGATTGTATCGGCGCCCCTGCAAACATTT
droSec2 scaffold_10:2149009-2149163 - --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTCGCCATGCA---AGTGCACAAGAGTGGAGTTGGTAATAAGACAGGTCCGCACAGTCTGATCCTAATACTAATTGGTGCCACCACTGTGGTTTACTTGCTTGCAGCCCGGGAGCGGCCGAGTGTAAAGATTGTATCGGCGCCCCTGCAAACATTT
droYak3 X:5968907-5969119 + CTTTT---------------------------------------------------------GCCCC--CG-------CCC-----------CCA-----TC-------TAAAC---------------------CCTTGTTGA------------------------------------------------------------------------------TC----CTTGAT---------------------------------------------------------------CTAAA-TAAAACCCAAAACTTTGCCATGCA---AGTGCACAAGAGTGGAGTTGGTAATAAGACAGGTCCGCACAGTCTGATCCTAATACTAATTGGTGCCACCACTGTGGTTTACTTGCTTGCAGCCCGGGAGCGGCCGAGTTTAAAGATTGTATCGGACGCCCAGCAAACATTT
droEre2 scaffold_4644:2326031-2326315 - TTTGCTCTATTTCATACTG---TTGTCTCTCTTCCAACACAAACA------CTGATTACC-TGCCCCC-------TTTC------------------------TTTTAA---------ATTTTAATTTGTA---------------------T-------------------AA-----CCCTTTGCCACATCCAAT---------------------CCGATC----CTTGAT---------------------------------------------------------------CT-AACTAAAACCCATAACTTTGCCATGCA---AGTGCACAAGAGTGGAGTTGGTAATAAGACAGGTCCGCACACTCTGATCCTAATACTAATTGGTGCCACCACTGTGGTTTACTTGCTTGCAGCCCGGGAGCGGCCGAGTGTAAAGATTGCATCGGCGCCGCTGCAAACATTT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
TTTGCTCTGTCTCATCCTATCTTTGTCTT------------------------------C-TGCCCC--------------CCAAATTTTCC--------CT-------TAACC---------------------TTATGATTATTATTATTTGAAATAC----AATT------------------------------------------------------------------------------ATAAACTA----------------------------ATG---------------------------TGATTTCGACATGCA---AGTGCACAAGAGTGGAGTTGGTAATAAGACAGGTCCACACAGTCTGATCCTAATACTAATCGGTGCAACCACCATCATTTACTTGTTTGCAGCCCGGGAGCGGCCGAGCGTTAAGATCGAGTCACCATCCCTGCAGACCCACSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAAGATCGAGTCACCATCCCTGCAGAC....2913.003300000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCACCATCCCTGCAGACC...1912.002200000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGTCACCATCCCTGCAGACCC..2312.002200000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCGTTAAGATCGAGTCAC.................2011.001100000
...............................................................................................................................................................................................................................................................................................................................................................................CACAGTCTGATCCTAATACT.....................................................................................2011.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAAGATCGAGTCACCATCCCTGG........2511.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTAAGATCGAGTCACCATC.............2111.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGAGTCACCATCCCTGCAG......2111.001010000
dp5
TTTGCTCTGTCTCATCCTATCTTTGTCTT------------------------------C-TGCCCC--------------CCAAATTTTCC--------CT-------TAACC---------------------TTATGATTATTATTATTTAAAATAC----AATT------------------------------------------------------------------------------ATAAACTA----------------------------ATG---------------------------TGATTTCGACATGCA---AGTGCACAAGAGTGGAGTTGGTAATAAGACAGGTCCACACAGTCTGATCCTAATACTAATCGGTGCAACCACCATCATTTACTTGTTTGCAGCCCGGGAGCGGCCGAGCGTTAAGATCGAGTCACCATCCCTGCAGACCCACSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..........................................................................................................................................................................................................................................................................................................................................................................................CCTAATACTAATCGGTGCAAC.........................................................................2111.0010000100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGAGTCACCATCCCTGCAGA.....2211.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................CTAATACTAATCGGTCGG...........................................................................18200.0511000000000
droWil2
TTATT-------------------------------------------------------------------------------------------------ATTTATA---------ATTTGTATTTGTT---------------------T-------------------AA-----A---------------------------------------------------AAT---------------------------------------------------------------TTGATTTGAAATGCATCACTTGCCCAAGCA---AGTGCGCAAAAATGGAGTCGGTAATAAGTCAGGTCCGCACAGTCTGTTACTCATATTAATATGTACCACCACGATCATTTGCTTGCTTGCAGCTCGTGAGCCACCGAGCATTGAAATATCACCAAGGGAGCCACAAACCCATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
......................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTGAAATATCACCAAGGGAGC...........2311.00100010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGCCACCGAGCATTGAAATATCACCA..................2811.00101000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATATCACCAAGGGAGC...........1911.00100010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATATCACCAAGGGAGCCACAAAC....2611.00100001
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAAATATCACCAAGGGAGCC..........2211.00100010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCACCAAGGGAGCCACAAACCCAT2611.00101000
.........................................................................................................................................................................................................................................................................................................................................................................................................TACCACCACGATCATTTGCTTGC........................................................2311.00100010
droVir3
ATTTATT-----------------------------------------------------------------------------------------------------------------------T--TTAACCATA-----------------------------T------------------------------------------------------------------------------ACATACAA----------------------------ATGTGATATTTAAATATATTT---------TGATTATGCATTGCA---AGTGCACAAGAATGGAGTCGGTAATAAGATAGGTCCGCACAGTCTGATCCTAATACTAATCTGTACAACCACCATAATTTACTTGCTTGCAGCTCGGGAGCGTCCGAGCGTTGATATAATTCCGGCGGCGCCACAGACGTTCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATTCCGGCGGCGCCACA.......1911.001000000000000000000100000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCCGGCGGCGCCACAG......1911.001000000000000000000000000000000000000000000000000000000000000100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGTTGATATAATTCCGGCGGCGC...........2511.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATATAATTCCGGCGGCGCCA.........2211.001000000000000000000000000000000000000000000000000000000000000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCGAGCGTTGATATAATTCCGGC................2511.001000000000000000001000000000000000000000000000000000000000000000
droMoj3
TTTGCTCTGTTTCTTCCTT--------------CCC------------------------------AT-------TTGC--------------------------------------------------------------------------------------------------------TTGCCACAATCAAT---------------------TTTGACAATGTTG------GTAAATTAATTGAACTGAAAACAATTTTCCTATGTATATTGATAATTTTAATACT----------TAATAATATATAATTTATAAATGCA---AGTGCACAAGAGTGGAGTCGGTAATAAGACAGGTCCGCACAGTCTGATCCTAATACTAATCTGTACAACCACCATAATTTACTTGATTGCAGCTCGGGAGCGACCGAGCGTTGAGATAGAGCC------AATAAGGACGCTCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
......................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTGAGATAGAGCC------AATAAGGACGCT.2711.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGAGATAGAGCC------AATAAGGACGCT.2611.001000001
droGri2
TTCCAT-------------------------------------------------------------------------------------------------------TAACT---------------------ATATAATAAATATTTTTTGATAAATGCATAAATTTTGAATAATCGCAT-------TTGA------------------------------------TATT---------------------------------------------------------------------TCGAATTTATGGTTATGCAATGCA---AGTGCACAAGAACGGAGTCGGTAATAAGACAGGTCCGCACTGTCTGATCCTAATACTAATCTGTACAACCACCATAATTTACTTGCTTGCAGCTCGGGAGGCTCCGAGCGTTGATATAACACCAGCGGTCCCAATGACATTCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACCAGCGGTCCCAATG......1813.00321
.........................................................................................................................................................................................................................................................................................................................................................................................................................................GGGAGGCTCCGAGCGTTGATATA........................2312.00220
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATAACACCAGCGGTCCCAATG......2312.00220
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACACCAGCGGTCCCAATG......2012.00211
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGCGGTCCCAATGACATT.2011.00101
..................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGCGTTGATATAACACCAGCGGT.............2511.00101
..........................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGCTCCGAGCGTTGATA..........................2011.00110
........................................................................................................................................................................................................................................................................................................................................................................................................................................CGGGAGGCTCCGAGCGTT..............................1811.00110
...................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCGTTGATATAACACCAGCGGTCCC..........2711.00110
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGCGGTCCCAATGACA...1811.00110
droAna3
CTTGCT---TCTCCTCTTG---TCGTCTCTCTCCC-CGACACACA------CTTACT-------------------------------------------CT-------T-------AATTTTAATT-------------------------TAAAATTC---------------------------------AAAAAA-----------------------------CATAAT---------------------------------------------------------------CT-ATTTAATGACTA-ACGTTTGCCATGCA---AGTGCACAAGAGTGGAGTCGGTAATAAGATAGGTCCGCACACTCTCATCCTAATACTAATCGGTGCCACCACCATCGTTTGCTTGCTTGCAGCTCGGGAGGCGCCGAGCGTTAAGATAGATAT---GCCCCAGCAGACCCAGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGAGCGTTAAGATAGATAT---GCC.............2411.001000010
.....................................................................................................................................................................................................................................................................................................................................................................................................TCGGTGCCACCACCATCGTTTGCT...........................................................2411.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAGATAT---GCCCCAGCA.......1811.001010000
droBip1
CTTGCTCTATCTCGTCCTGTTGTTGTCTCTCTCCC-TGACACACACACACACTGATTATTTTTTCA-------------------------------ATT--A---------------------ATT--TT-----------------------AAACAT----AATT-----------------------TTAAA--------------------------------CATAATTTAAAAAAAAAACTTAA----------------------------------------------------------CTAAACGTTTGCCATGCA---AGTGCACAAGAGTGGAGTCGGTAATAAGATAGGTCCGCACAGTCTGATCCTAATACTAATCGGTGCCACCACCATCGTTTGCTTGCTTGCAGCTCGGGAGGCGCCGAGCGTTAAGATAGATCT---GCCCCAGCAGACCCAGSizeHit CountTotal NormTotal
No Reads
droKik1
ATTTT-------------------ATTTCTATCAAATCCTAAACC------CTG---------GACC--------------CCC-------C--------AT-------GAACCATTAATTTTAATT-------------------------A------------------------------------------------------------------------------------AAAAAAAAAACAAACAA----------------------------A-----------------------------------AAACACACACTTAGTGCACAAGAGTGGAGTCGGTAATAAGACAGGTCCGCACAATCTGATCCTTATACTAATCGGTGCCACCACCATCGTTTGCTTGTTTGCAGCTCGGGAGCGGCCGAGCATTAAGATAGAATCCGAACCCATCCAGACCGCCSizeHit CountTotal NormTotal
No Reads
droFic1
TTTGCTCTGTCTCGTCTTG---TTGTTTCTCTTCCCTCACAAACA------CTAATTATC-CGCC---------------------------CGAATATT--ATTTATAT-------CATTTAAATTTG-------------------------CAAA---------------------------------TCAAACCCC--AACCCC--------------------TTTGAT---------------------------------------------------------------CTAAC-TTAAACACAAAACTTTGCCATGCA---AGTGCATAAAAGTGGAGTTGGTAATAAGACAGGTCCGCACAGTCTGATCCTAATACTAATTGGTGCCACCACTGTCGTTTACTTGTTTGCAGCCCGGGAGCGGCCGAGCGTTAAGATCGAACCGCCGCTCCAGCAAACAGTTSizeHit CountTotal NormTotal
No Reads
droEle1
TTTGCTCTATTTCGTCTTG---TTGTCTCTCTTCCCTCACAAACA------CTGATTATCTTGCCC--------------------------CGAATATT--A---------------------TTA--TT---------------------T-------------------AA-----A----------------CCCTTTAAACCCCTGACCCCACTCTG------TTTGAT---------------------------------------------------------------CTAAATTAAAACTTAAAACTTTGCCATGCA---AGTGCACAAGAGTGGAGTTGGTAATAAGACAGGTCCGCACACTCTGATCCTAATACTAATTGGTGCCACCACTGTCGTTTACTTGTTTGTAGCCCGGGAGCGGCCTAACATTAGGATTCAGCCGGAGACCCAGCAAACAGTTSizeHit CountTotal NormTotal
No Reads
droRho1
TTTGCTCTATTTCGTCTTG---TTATCTCTCTTCCCTCACAAACA------CTGATTATCTTGCCCCC-------TTACCT-----------CTAATATT--A---------------------TTA--TT---------------------T-------------------AA-----C----------TCCCGA---------------------CTCGA------TTTGAT---------------------------------------------------------------CTAAATTATAACGTACAACTTTGCCATGCA---AGTGCACAAGAGTGGAGTTGGTAATAAGACAGGTCCGCACAGTCTGATCCTAATACTAATTGGTGCCACCACTGTCGTTTACTTGTTTGCAGCCCGGGTGCGGCCGAGCTTAAATATTGAGCCTTCGACCCCGCAAACAGTTSizeHit CountTotal NormTotal
No Reads
droBia1
TTTGCTCTATCTCGTATTG---TTGTCTCTCTTCCCTCACAAACA------CTGATTATCTCGCCCCCCTCCCCCAACCCC-----------CTTTTATT--A---------------------TTT--TT---------------------G-------------------AA-----ACAT-------TTGAAA---------CCC--------------------CTTAAT---------------------------------------------------------------CCGAATTAAAACCCA-AACTTTGCCATGCA---AGTGCACAAGAGTGGAGTTGGTAATAAGACAGGTCCGCACAGTCTGATCCTAATACTAATTGCTGCCACCACTGTGGTTTACTTGTTTGCAGCCCGGGAGCGGCCGAGCATTAGGGTTGAT---GCGCCCCAGCAA-CCGATSizeHit CountTotal NormTotal
No Reads
droTak1
TTTGCTCTATTTCGTGTTG---TTGTCTCTCTTCCCTCACAAACA------CTGATTAAT-------------------CC-----------CGAATATT--G---------------------ATT--TT---------------------T-------------------AA-----A-------------AAACCCCAAAACCCCC-----CAAATA-----------TAT---------------------------------------------------------------TT-AATTAAAACCCAACACTTCGCCATGCA---AGTGCACAAGAGTGGAGTTGGTAATAAGACAGGTCCGCACAGTCTTCTCCTAATACTAATTGGTGCCACCACTGTCGTTTACTTGTTTGCAGCCCGGGAGCGGCCGAGTCTTACGATTGATACGGCCACC---CAAAAGGTTSizeHit CountTotal NormTotal
No Reads
droEug1
TTTGCTGTATTTCATATTG---TT--CTCTCTTCCTTCACAAACACA-----CGATTT-CTTGCCCC--TG-------CCC-----------CAAATATT--T---------------------TTGTGTT---------------------T-------------------AA-----A----------TCCAAACCCCTTAACCCCTTAA----------CC----CCTGAT---------------------------------------------------------------TTCAATTTAAACCCAATACTTCGCCATGCA---AGTGCACAAAAGTGGAGTTGGTAATAAGACAGGTCCGCACAGTCTGATCCTAATACTAATTGGTGCCACCACTGTCGTTTGCTTGTTTGCAGCTCGGGAGCGACCGAGCCTTAAGATTGAGTCGGCGCCCCAGGAACCA--TSizeHit CountTotal NormTotal
No Reads
dm3
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTCGCCATGCA---AGTGCACAAGAGTGGAGTTGGTAATAAGACAGGTCCACACAGTCTGATCCTAATACTAATTGGTGCCACCACTGTGGTTTACTTGCTTGCAGCCCGGGAGCGGCCGAGTGTAAAGATTGTATCGGCGCCCCTGCAAACATTTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGAGTGTAAAGATTGTAT....................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGCCGAGTGTAAAGATTGTATCGGC................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000200000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAAAGATTGTATCGGCGCCCCTGCAAA.....2913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGATTGTATCGGCGCCCCTGC........2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGCCGAGTGTAAAGATTGTATCGGC................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAGATTGTATCGGCGCCCCTGCAAA.....2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTATCGGCGCCCCTGCAAAC....2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGCGCCCCTGCAAACA...1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................ATAAGACAGGTCCACACAG....................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGATTGTATCGGCGCCCCTGCAAACA...2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAGATTGTATCGGCGCCCCTGCAAAC....2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................TTACTTGCTTGCAGCCCGGGAGCGGCCGA...................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................................................................................................................................................................................................................................................................................................................................................................................CTAATACTAATTGGTGCCACCACTGTGGTT...............................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................CCACCACTGTGGTTTACTTGCTTGC....................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TACTTGCTTGCAGCCCGGGAGCGGC......................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGCCGAGTGTAAAGATTGTATCGGCG...............2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................ACCACTGTGGTTTACTTGC........................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................ACTTGCTTGCAGCCCGGGAGCGGCCGAG..................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAGATTGTATCGGCGCCCCTGCAA......2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................TACTAATTGGTGCCACCACTGTGGT................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................GCCACCACTGTGGTTTACTTGCTTG.....................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................ATTGGTGCCACCACTGTGGTT...............................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................GTTTACTTGCTTGCAGCCCGGGAGC.........................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAAAGATTGTATCGGCGCCCC...........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...................................................................................................................................................................................................................................................................................................................................TGCA---AGTGCACAAGAGTGGAGTTGGT........................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAAAGATTGTATCGGCGCC.............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................CCATGCA---AGTGCACAAGAGTG................................................................................................................................2111.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................CCATGCA---AGTGCACAAGAGTGG...............................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTGTAAAGATTGTATCGGCG...............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGAGTGTAAAGATTGTATCGG.................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................TTCGCCATGCA---AGTGCACAAGAGTGGA..............................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGTGTAAAGATTGTATC...................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAGATTGTATCGGCGCC.............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGATTGTATCGGCGCCCCTG.........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................ATAAGACAGGTCCACACAGTCTGATCC............................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................CATGCA---AGTGCACAAGAGTGGA..............................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCGGCGCCCCTGCAAA.....1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TACTTGCTTGCAGCCCGGGAGCGGCCGA...................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................................................................................................................................................................................................................................................................................GCACAAGAGTGGAGTTGGT........................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGTAAAGATTGTATCGGCGC..............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
.................................................................................................................................................................................................................................................................................................................................CATGCA---AGTGCACAAGAGT.................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................ACTGTGGTTTACTTGCTTGCAG..................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTGTATCGGCGCCCCTGCAAA.....2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................ACCACTGTGGTTTACTTGCTTGCAG..................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTATCGGCGCCCCTGCAA......2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAAAGATTGTATCGGCGCCCCTGC........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTATCGGCGCCCCTGCAAAC....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................GTGCACAAGAGTGGAGTTG..........................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................CCACTGTGGTTTACTTGCTTG.....................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGATTGTATCGGCGCCCCTGCAAA.....2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGATTGTATCGGCGCCCCTGC........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTCGCCATGCA---AGTGCACAAGAGTGGAGTTGGTAATAAGACAGGTCCGCACAGTCTGATCCTAATACTAATTGGTGCCACCACTGTGGTTTACTTGCTTGCAGCCCGGGAGCGGCCGAGTGTAAAGATTGTATCGGCGCCCCTGCAAACATTTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTGTAAAGATTGTATCGGCGCC.............2412.00200200000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTGTAAAGATTGTATCGGCGCCC............2512.00200200000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTATCGGCGCCCCTGCAAAC....2311.00100100000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGTGTAAAGATTGTATCGG.................2111.00100010000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................CACCACTGTGGTTTACTTGCTTG.....................................................2311.00100100000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGATTGTATCGGCGCCCC...........1911.00100100000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGTAAAGATTGTATCGGC................2011.00100000100000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................ACCACTGTGGTTTACTTGCTTGCA...................................................2411.00110000000000000000
droSec2
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTTCGCCATGCA---AGTGCACAAGAGTGGAGTTGGTAATAAGACAGGTCCGCACAGTCTGATCCTAATACTAATTGGTGCCACCACTGTGGTTTACTTGCTTGCAGCCCGGGAGCGGCCGAGTGTAAAGATTGTATCGGCGCCCCTGCAAACATTTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.............................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGCCGAGTGTAAAGATTGTATCGG.................2621.0020020
.............................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGCCGAGTGTAAAGATTGTATCG..................2520.5010010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................CGGCCGAGTGTAAAGATT........................1820.5010010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAAGATTGTATCGGCG...............1820.5010010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTAAAGATTGTATCGGCGCC.............2220.5010010
droYak3
CTTTT---------------------------------------------------------GCCCC--CG-------CCC-----------CCA-----TC-------TAAAC---------------------CCTTGTTGA------------------------------------------------------------------------------TC----CTTGAT---------------------------------------------------------------CTAAA-TAAAACCCAAAACTTTGCCATGCA---AGTGCACAAGAGTGGAGTTGGTAATAAGACAGGTCCGCACAGTCTGATCCTAATACTAATTGGTGCCACCACTGTGGTTTACTTGCTTGCAGCCCGGGAGCGGCCGAGTTTAAAGATTGTATCGGACGCCCAGCAAACATTTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGTTTAAAGATTGTATCGGACGCC............2613.00320100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAGATTGTATCGGACGCCCAGCAAACA...2912.00200000000002
....................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTTAAAGATTGTATCGGACG..............2211.00110000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTATCGGACGCCCAG.........1811.00110000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTAAAGATTGTATCGGACGCC............2311.00110000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTTAAAGATTGTATCGGACGC.............2311.00100000100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAAAGATTGTATCGGACGCC............2211.00110000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTATCGGACGCCCAGC........1811.00110000000000
droEre2
TTTGCTCTATTTCATACTG---TTGTCTCTCTTCCAACACAAACA------CTGATTACC-TGCCCCC-------TTTC------------------------TTTTAA---------ATTTTAATTTGTA---------------------T-------------------AA-----CCCTTTGCCACATCCAAT---------------------CCGATC----CTTGAT---------------------------------------------------------------CT-AACTAAAACCCATAACTTTGCCATGCA---AGTGCACAAGAGTGGAGTTGGTAATAAGACAGGTCCGCACACTCTGATCCTAATACTAATTGGTGCCACCACTGTGGTTTACTTGCTTGCAGCCCGGGAGCGGCCGAGTGTAAAGATTGCATCGGCGCCGCTGCAAACATTTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAAGATTGCATCGGCGCCGCTGC........2513.0030200100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGTGTAAAGATTGCATC...................1912.0020001100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAAGATTGCATCGGCGC..............1912.0020001010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAAGATTGCATCGGCGCC.............2011.0010001000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGTGTAAAGATTGCATCGGCGC..............2411.0010100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGTAAAGATTGCATCGGCGCCG............2411.0010000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCGAGTGTAAAGATTG.......................1811.0010001000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTGTAAAGATTGCATCGGCGC..............2311.0010100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTGCATCGGCGCCGCTGCAAA.....2311.0010001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGATTGCATCGGCGCCGC...........1911.0010000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAAGATTGCATCGGCGCCG............2111.0010000100

Generated: 06/08/2015 at 03:00 PM