ID:

dpe_674

 Coordinate:

scaffold_11:2624073-2624281 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

CDS [Dper\GL14455-cds]; exon [dper_GLEANR_15140:6]; CDS [Dper\GL14455-cds]; exon [dper_GLEANR_15140:7]; intron [Dper\GL14455-in]

No Repeatable elements found

Sense Strand Reads

##################################################-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CAATGAGACAATGCACGTGTACCAGGACACCGTCTCCGTCACCATATCACGTGAGTAAACCGCTTCCCAGAGTGGCGCTGCCCCCTCTTTGCTAATCATTGACACTTCTTTGACACTGCGGCTCTACCTAAAGGATATGCCAAGGAAATGTTGGCTCGCTACGGTATCTAAGAATCTCCTCAAGAATGCCCCAAAAATCCCCCATAAAATCCTTCAATTGATTTGAGACGATAGTGACTTTCTGATTTCCCTTTTGCAGAGGAAGGCCAGCGCTCGCCGGCCCGAATTGTGGACCTGCCCAACCATGTT
**************************************************.........((((((....))))))..((((.........((...(((..((....))..)))....))(((....((....))....)))..((((((...((.((((((((...(((..(((((.....(((.((.....................)).))).....))))).))))).)))))))).....)))))).....))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total V111
male body		 M042
female body
 M021
embryo
 V057
head
 V050
head
 V042
embryo
......................................................................................................................................ATGTGGCAAGGAAATGTTGGT.......................................................................................................................................................... 21 3 5 40.80 204 140 58 0 5 1 0
.....................................................................................................................................AATGTGGCAAGGAAATGTTGG........................................................................................................................................................... 21 3 5 40.00 200 138 60 0 2 0 0
......................................................................................................................................ATGTGGCAAGGAAATGTTGG........................................................................................................................................................... 20 2 1 29.00 29 13 16 0 0 0 0
......................................................................................................................................ATGTGGCAAGGAAATGTTG............................................................................................................................................................ 19 2 8 5.88 47 18 29 0 0 0 0
......................................................................................................................................ATGTGGCAAGGAAATGTTGGC.......................................................................................................................................................... 21 2 1 3.00 3 1 1 0 1 0 0
.........................................................................................................................................TGGCAAGGAAATGTTGGT.......................................................................................................................................................... 18 2 7 3.00 21 5 15 0 1 0 0
.......................................................................................................................................TGTGGCAAGGAAATGTTGGT.......................................................................................................................................................... 20 3 20 2.10 42 20 21 0 0 1 0
.......................................................................................................................................................................................................................................................................................GCCCGAATTGTGGACCTGCCCAACC..... 25 0 1 2.00 2 0 0 2 0 0 0
.....................................................................................................................................GATGTGGCAAGGAAATGTTGGT.......................................................................................................................................................... 22 3 3 2.00 6 6 0 0 0 0 0
......................................................................................................................................ATGTGGCAAGGAAATGTTGGTT......................................................................................................................................................... 22 3 1 2.00 2 1 1 0 0 0 0
........................................................................................................................................GTGGCAAGGAAATGTTGG........................................................................................................................................................... 18 2 15 1.53 23 14 9 0 0 0 0
.....................................................................................................................................GATGTGGCAAGGAAATGTTGG........................................................................................................................................................... 21 2 1 1.00 1 1 0 0 0 0 0
......................................................................................................................................................................................................................................................................................GGCCCGAATTGTGGACCTGCCC......... 22 0 1 1.00 1 0 1 0 0 0 0
.........................................................................................................TTCTTTGACACTGCTGCTCTA....................................................................................................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0
...........................................................................................................................................................................................................................................................................................GAATTGTGGACCTGCCCAACCATGT. 25 0 1 1.00 1 0 1 0 0 0 0
.........................................................................................................................................................................................................................................................................................CCGAATTGTGGACCTGCCC......... 19 0 1 1.00 1 0 0 1 0 0 0
....................................................................................................................................GAATGTGGCAAGGAAATGTTGG........................................................................................................................................................... 22 3 1 1.00 1 0 1 0 0 0 0
..............................................................................................................................................................................................................................................................................CGCTCGCCGGCCCGAATTGTGGACCT............. 26 0 1 1.00 1 0 0 1 0 0 0
......................................................................................................................................................................................................................................................................................GGCCCGAATTGTGGACCTGCC.......... 21 0 1 1.00 1 0 0 1 0 0 0
.......................................................................................................................................................................................................................................................................................TCCCGAATTGTGGACCTGCCCAACCATGT. 29 1 1 1.00 1 0 0 1 0 0 0
....................................................................................................................................GTATGTGGCAAGGAAATGTTGG........................................................................................................................................................... 22 3 2 1.00 2 2 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................ATTGTGGACCTGCCCAACCATGT. 23 0 1 1.00 1 0 0 1 0 0 0
..................................................................................................................................................................................................................................................................................CGCCGGCCCGAATTGTGGACCG............. 22 1 1 1.00 1 0 0 1 0 0 0
.........AATGCACGTGTACCAGGACACCGTCTC................................................................................................................................................................................................................................................................................. 27 0 1 1.00 1 0 0 1 0 0 0
..................................................................................................................................................................................................................................................................................CGCCGGCCCGAATTGTGGACCT............. 22 0 1 1.00 1 0 0 1 0 0 0
.....................................................................................................................................AATATGGCAAGGAAATGTTG............................................................................................................................................................ 20 2 2 1.00 2 2 0 0 0 0 0
..................................................................................................................................................................................................................................................................................CGCCGGCCCGAATTGTGGACCTG............ 23 0 1 1.00 1 0 0 1 0 0 0
.........................................................................................................................................................................................................................................................................................CCGAATTGTGGACCTGCC.......... 18 0 1 1.00 1 0 0 1 0 0 0
..............................................................................................................................................................................................................................................................................CGCTCGCCGGCCCGAATTGTGGACCTGC........... 28 0 1 1.00 1 0 0 1 0 0 0
........................................................................................................................................................................................................................................................................................CCCGAATTGTGGACCTGCCCAACC..... 24 0 1 1.00 1 0 0 1 0 0 0
.......................................................................................................................................................................................................................................................................................GCCCGAATTGTGGACCTGCC.......... 20 0 1 1.00 1 0 0 1 0 0 0
.....................................................................................................................................GATGTGGCAAGGAAATGTT............................................................................................................................................................. 19 2 10 0.90 9 6 3 0 0 0 0
.......................................................................................................................................TGTGGCAAGGAAATGTTGG........................................................................................................................................................... 19 2 6 0.83 5 3 2 0 0 0 0
.....................................................................................................................................AATATGGCAAGGAAATGTT............................................................................................................................................................. 19 2 8 0.75 6 6 0 0 0 0 0
.....................................................................................................................................GATGTGGCAAGGAAATGTTG............................................................................................................................................................ 20 2 3 0.67 2 2 0 0 0 0 0
........TAATGCACGTGTCACAGGAC......................................................................................................................................................................................................................................................................................... 20 3 3 0.33 1 0 0 0 1 0 0
.................................................CGCGAGTAAACCGGTTCCGAG............................................................................................................................................................................................................................................... 21 3 3 0.33 1 0 0 0 1 0 0
........................................................................................................................................GTGGCAAGGAAATGTTGGCCC........................................................................................................................................................ 21 3 4 0.25 1 0 0 0 0 1 0
.......................................................................................................................................TGTGGCAAGGAAATGTTGGTT......................................................................................................................................................... 21 3 5 0.20 1 0 1 0 0 0 0
......................................................................................................CACTTCTTTGACGCTGCGGCTCC........................................................................................................................................................................................ 23 2 7 0.14 1 0 0 0 0 0 1
.................................................................................................................................................................................................................................................................................................TGGACCTGCCGGACCGTGT. 19 3 14 0.14 2 2 0 0 0 0 0
.....................................................................................................................................CATGTGGCAAGGAAATGTTGG........................................................................................................................................................... 21 3 8 0.13 1 0 1 0 0 0 0
...........................................................................................................CTATGACACCGCGGCTCCA....................................................................................................................................................................................... 19 3 11 0.09 1 0 0 0 0 0 1
........................................................................................................................................GTGGCAAGGAAATGTTGGTT......................................................................................................................................................... 20 3 13 0.08 1 1 0 0 0 0 0
.....................................................................................................................................AATTTGGCAAGGAAATGTTGG........................................................................................................................................................... 21 3 16 0.06 1 0 1 0 0 0 0
......................................................................................................................................ATTTGGCAAGGAAATGTT............................................................................................................................................................. 18 2 17 0.06 1 0 1 0 0 0 0
........................................................................................................................................GTGGCAAGGAAATGTTGGCC......................................................................................................................................................... 20 3 20 0.05 1 1 0 0 0 0 0
..................................................................................................................................AAGAATGTGGCAAGGAAATGT.............................................................................................................................................................. 21 3 20 0.05 1 0 1 0 0 0 0

Anti-sense strand reads

GTTACTCTGTTACGTGCACATGGTCCTGTGGCAGAGGCAGTGGTATAGTGCACTCATTTGGCGAAGGGTCTCACCGCGACGGGGGAGAAACGATTAGTAACTGTGAAGAAACTGTGACGCCGAGATGGATTTCCTATACGGTTCCTTTACAACCGAGCGATGCCATAGATTCTTAGAGGAGTTCTTACGGGGTTTTTAGGGGGTATTTTAGGAAGTTAACTAAACTCTGCTATCACTGAAAGACTAAAGGGAAAACGTCTCCTTCCGGTCGCGAGCGGCCGGGCTTAACACCTGGACGGGTTGGTACAA
**************************************************.........((((((....))))))..((((.........((...(((..((....))..)))....))(((....((....))....)))..((((((...((.((((((((...(((..(((((.....(((.((.....................)).))).....))))).))))).)))))))).....)))))).....))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 V057
head
 V111
male body		 M021
embryo
......................................................................................................................................TACACCGTTCCTTTACAACCA.......................................................................................................................................................... 21 3 5 2.20 11 11 0 0 0
......................................................................................................................................TACACCGTTCCTTTACAACCG.......................................................................................................................................................... 21 2 1 1.00 1 1 0 0 0
........................................................................................................................................................................................................................................................................CCGGGCGCGAGGGGCCGGGCT........................ 21 2 1 1.00 1 0 1 0 0
.....................................................................................................................................................................................TTCTTCCGGGGTTTTAAGGGAGT......................................................................................................... 23 3 1 1.00 1 0 1 0 0
.......................................................................................................................................................................................................................................................................TCCGGTAGTGAGCGGCCGGGCA........................ 22 3 1 1.00 1 0 1 0 0
......................................................................................................................................TACACCGTTCCTTTACAACC........................................................................................................................................................... 20 2 1 1.00 1 1 0 0 0
............................TGGAAGAGGCAGGGGTGTAG..................................................................................................................................................................................................................................................................... 20 3 11 0.91 10 0 0 10 0
.....................................................................................................................................TTACACCGTTCCTTTACAACC........................................................................................................................................................... 21 3 5 0.60 3 3 0 0 0
...................................................................................................................................................................................................TTAGTGGGTATTTGAGGTAGT............................................................................................. 21 3 4 0.25 1 0 1 0 0
......................................................................................................................................................................................................................................................................TTCCGGGAGCGAGGGGCCGG........................... 20 3 10 0.20 2 0 2 0 0
.....................................................................................................................................CCACACCGTTCCTTTACAACC........................................................................................................................................................... 21 3 6 0.17 1 1 0 0 0
.......................................................................................................................................ACACCGTTCCTTTACAACC........................................................................................................................................................... 19 2 6 0.17 1 1 0 0 0
......................................................................................................................................................................................................................................................................TTCCGGTCGCGACGGGCGGGG.......................... 21 3 6 0.17 1 0 1 0 0
.......................................................................................................................................ACACCGTTCCTTTACAACCA.......................................................................................................................................................... 20 3 20 0.15 3 3 0 0 0
......................................................................................................................................................................................................................................................................TTCCGGGCGCGAGGGGCTGG........................... 20 3 8 0.13 1 0 1 0 0
................................................................................................................................................................................................................TAGGAGGTTAACAAAACTTT................................................................................. 20 3 19 0.05 1 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_11:2624023-2624331 + dpe_674 CAATGAGACAATGCACGTGTACCAGGACACCGTCTCCGTCACCATATCACGTGAGTAAACC-GCT-----TCCCAG--------AG--TG--------GC-G---CTG---------------CCCCCTCTTT---------------------GCTAATCATTGA-C-------------------------------------ACTTCTTT-GACACTGCGGCTCTACC----------T-AAAGGATATGCCAAGGAAATGTTGGCTCGCTACGGTATCTAAGAATCTCCTC-----------------------------------------AA--------------------------------G------AATGCCCCAAAAATCCCCCATAAAATCC-----TTCAAT-------------------------------------------------------------------------------------------------------------------------------TGATTTGAGACGATAGTGAC--------------------------------TTTCTGATTTC--------------------CCTTTTGCAGAGGAAGGCCAGCGCTCGCCGGCCCGAATTGTGGACCTGCCCAACCATGTT
dp5 XL_group3a:2052108-2052416 - CAACGAGACAATGCACGTGTACCAGGACACCGTCTCCGTCACCATATCACGTGAGTAAACC-GCT-----TCCCAG--------AG--TG--------GC-G---CTG---------------CCCCCTCTTT---------------------GCTAATCATTGA-C-------------------------------------ACTTCTCT-GACACTGCGGCTCTACC----------T-AAAGGATATGCCAAGGAAATGTTGGCTCGCTACGGTATCTAAGAATCTCCTC-----------------------------------------AA--------------------------------G------AATGCCCCAAAAATCCCCCATAAAATCC-----TTCAAT-------------------------------------------------------------------------------------------------------------------------------TGATTTGAGACGATAGTGAC--------------------------------TTTCTGATTTC--------------------CCTTTTGCAGAGGAAGGCCAGCGCTCGCCGGCCCGAATTGTGGACCTGCCCAACCATGTT
droWil2 scf2_1100000004909:12086428-12086746 - TGCTGAAACCTTTAGAGAATACAAGGACACTGTCTCCATTACCATAACAGGTGAGTGTAAG-ATA-----CTTTT-T-------TTAGAG--------GC------AACTC----TTAGTTT-ACTCCTTTTA---------------------CCTGATC--------TCTTTTGACATGCCTGC-ATACAAAA--AAAAAAC----------------------AAAAT----------A-TAAGAATATGCCATGGAAATGTTGGCTCGCTACGGTATCTATCTATATATA-AAC-----------GAATCC---------------------------------------------AACT--CTAGCCTCATGTTTGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATCCTTAAACA--------ATTTTA------TCATTTGATT------------------CTTTGATTTCTATAGAAATAGAACAAGAGTCGCCCGCACGCATTGTGTATTTGCCCAGTTATGTG
droVir3 scaffold_12928:1371464-1371760 - dvi_8448 CAATCAGACCTCGCGCGTCTTCGAGGACAAGGTTTCCATCACCATATCAAGTGAGTGTCCA-CAT--TAACCTTAG--------GT--TA--------GC-G---CAA---------------CTAGAATTAA---------------------GCTAATCTCTTA-T-------------------------------------ACTAACTC-GTTACTGCGGCAATCGC----------CTCAAGGATATGCCAGCGAAATGTTGGCACGCTATGGTAGCTATTG------------AG---GATACATTTTGGTCTATTG-----------------------------------------------GCTCATGCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATGC-TAAT----------------CATTTCT------GCTGTCAATC--------------------TCTCAATCTCTAGATCAATCGCAACGCTCGCCCGCCCAGATCGTCAGTCTGCCCAGCACGGTG
droMoj3 scaffold_6473:13636736-13637055 + CAACCAGACCTCTCGCGCCTACGAGGACATGGTCTCCATAACCATAACACGTAAGTCTCTTGCACACTA------TTGCT---T------TT-----------------------------------------------------------------------------------CTCAAGTCGGGATAAACAATCTAAAAAGTTAACTAATT-TGACATGCGGCATTTGT----------GTAAAGGATATGCCAAAGAAATGCTGGCACGCTATGGTAGCTATTGA------------G---GATTC--------------------------------------------------------------------------------------------------------A-------------------------------------------------------------------------------------------ATTGATTTCCTTTTCTTAATATCATCCTTACTAATATTCTCCCTTATCT--------------------------CGTTCTCGTTCTCCCTCTCGTT-CTC--------------------CCTCTCGCAGCGCATTCCCAACGCTCGCGCGCTCAGATTGTCAATCTGCCGCAGACGGTG
droGri2 scaffold_15203:8359535-8359706 + CAACCAGACTCTGCGCGTCTTCAAGGATGAGGTCTCCATCACCATATCAAGTAAGTGCACG-TAT-----TCCAG-C-------TA--TG--------C-AAA--------------AG---C----------------AAAAAA-C-------TTAAACTAATCTTTC----------------------------------TAAACAAATT--CAAATGCGGCATTCGC----------CTCAAGGATATTCTGAAGAAATGTTGGCTCGCTATGGTAGCTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_12929:2288218-2288531 - dan_822 CAATGAGACTAGCCACGTCTTCGAGGACACCGTTTCCATCACCATTTCCAGTAAGTCTACT-ACC-----TCAGA-T-------CC--TA--------G-AT---CAT---------------CTCCTTCTTTAAAATAGAAAAG-A-----AAACTGAACTCTTA--------------------------------------AACCCTTTT-TAAAATGCTGCCTTTTATAAAAAAAAAA-AAAGGATATGCCAAGGCCATGCTGGCAAGATACGGTACAGAATA-GATCCTC-----------------------------------------AA--------------------------------G------CT----C----------------------------------------------------------------------------------------------------------------------------------------------------------------CA-------GGATATCCGCTTTCCAGTTAATAATATT--------------------------------TTAAAATAATCTTCCCCCCACAGCTCATGCCCAGCGCTCTCCGGCCACGATTGTCAGCCTGCCCCAGACGGTG
droBip1 scf7180000396434:282268-282555 - CAACGAGACTGCACGCGTCTTCGAGGACACCGTTTCCATCACCATTTCCAGTAAGTCTTTC-AAC-----TTAGATCCTTTTT-T---------------TTG--------------AA-----TCCTTCTTTAAAATT-------------------CACCTT----G----------------------------------AAACCTTTTT-AAAAATGCGGCATTT--------------AAAGGATATGCCAAAGCCATGTTGGCTAGATACGGTATAACATA-GATC------------CCTATGGCTGAGGATATGCATTATCCCTC--TAA--------------------------------T------GA-----------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------AC-----------------TATATTT------TC----------------------------TCCCCCCACACAGCCCACGACCAACGCTCTCCGGCCCAGGTTGTTAGCCTGCCCCAGACCGTG
droKik1 scf7180000302258:517140-517560 - CAATGACACCGAGAATCTGTTTGAGGATCGCATCTCCATTACCATTACCAGTGAGTTTTAG-CAT-TTA------TTGTT---T------TC---------------------------------------------------------------TTTAAT--------TTTTTTAATCTGTAAGA-TTAACAAT--TAAAAAT-AATTTATA-AAAATGCCTACGCTTAA----------C-GAAGGATATGCCAAGGAAATGCTGGCACGCTATGGTATTTCAAGCTTAG------------------A-------------TTTACCACTCTTTCCTTTTTTTTTTGAGACCCTTAACCCT--CTAAG------CC----C-------------------CA------AAAGTGCCTT-AAGGC--ACTAATTACTTTTTTCACAATTCTTTTTTACGTTTAAATATTTTTTTAATATTTTAAAGTGGCTTTAGAGGGTTTAAATTATTTTTTATATAT---------------------------------------------------------------------A-CTT--------------------ATCCCCCCCCCCACACACAGCTGAAAGCCAACGCCGACCCGCCCAGATTGTTAACCTGCCCAACCATGTT
droFic1 scf7180000453927:178662-179032 - CAACGAGACCGCTCGCGTCTTCAAGGACCATGTCTCGATCACCATATCACGTGAGTATTAG-TTT-----TCTAA-C-------CC--TT--------A-ACA--------------TA---C----------------CAATAA-G---------TAATCATAAT-CA----------------------------------CGACCTTT----TAAATGCCGCATATAT----------C-AAAGGATATGCCAAGGAAATGCTGGCACGATACGGTACTTAAAGT-----------------ATATGATTTTA-------------TGTTAACAA-------------GAGCC----CACT--GTAGG------CA----C-------------------CT------TAAATGTTTCCAAGGTGTAGAAATT---------------------------------------------------------------------ATTGTTGTACTATTCTTTTTGATAT--------TTATTTTATTTAAACA--------------------------CATTTTGAA---------TTTTC-TACTTTTTTTGAACCCCAAACACCACCTATAGAGGATGGCCAGCGCTCTCCGGCTCAGATAGTCAATTTGCCGAACCACGTG
droEle1 scf7180000491011:694683-694861 - CAAGGAAACCAACCGCGTCTTCAAGGATTCCGTCTCCATCACCATAACCCGTGAGTATTTG-TT-------CTGT-A-------CC--TA--------A-TTG--------------TA---T----------------CCATAC-T---------TTATCGTTCC-CC----------------------TAATCTAAAA--------AACA-AAAAATGCTGCATTATT----------C-AAAGGATATGCCCAGGAAATGCTGGCTCGCTATGGTATTTAAAGCTTTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000779506:485172-485367 - CACCGCAGACAATCGCATCTTCAAGGACTCTGTCTCCATTACCATAACTCGTGAGTATTGG-TTA-----TCTGT-C-------CC--TT--------C-ATG--------------AA---C----------------CCATTC-C---------TAACCGTACT-CA----------------------------------TAATCTCATA-CAAATTGCGGCATTTAT----------C-AAAGGATATGCCCAGGAAATGCTGACACGCTACGGTATTATACATTTTAAA-AACTAC--------------------------------ATTAA--------------------------------A------AAAGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000301760:4788208-4788563 + CAACGAAACCGGACGCATCTTCACGGATAACATCGTCATCACTGTTACCCGTGAGTACTGG-GGG-----TCCAT-A-------CC--TA--------G-AAA--------------TA---C----------------CAATAG-C---------TAATCGTATT-TA----------------------------------TAATCCCATA-AAAATTGCGGCATTTAT----------C-GAAGGTTATGCCGAGGAAATGTTGGCACGATACGGTACTTAAAATTCCCAA-AATTGA---TTTATGTTTTCA-------------TTTTAATAA-------------CTAGT----TATTTCTTTGG------TA----C-------------------CT------GCA-------------------------------------------------------------------------------------------------------------ATATTATCCCTATGAAT---ATATAAAT-CC--------------------------TAAGTTG------ACGTATTTCA-TCTTTTTCTTCTCTCCACAATTTAACCCTTAGCGACGGACCAACGCTCAGCGGCGGAGATTGTGGACTTGCCGAGCGAGGTG
droTak1 scf7180000415151:429114-429444 + CAACGAGACCGGCCACAGCTTTACGGACCACGTCTCCATCACTGTTTCCCGTGAGTACCGG-TTA-----CCTAT-T-------CC--GTTTACCTATA-AAA------------TCTA---C----------------CAAATAGC---------TAATAACACT-TG----------------------------------TAATCTCACAAAAAATTGCGGCATTTAT----------C-AAAGGATATGCCCAGGAAATGCTGGCACGATACGGTACTTGAAATTTCCCA-GCAAAATTACATATTATATT-TAGA-AGATTATATTACATTTG--------------------------------G------CA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGATAAAAAC-----------------CATGTTT-----------------TC---TCTTTTACCAAAAAATGCAATCCTCAGAGGAGGATCAACGCTCGCCGGCTCACATTGTGGATTTGCCCAACGACGTG
droEug1 scf7180000409277:63339-63499 - CAACGAAACCACACACGTCTTCAAGGACACCGTGTCCATCACCATTTCCCGTGAGTGCTGG-TTA-----TCTGT-C-------CT--TA--------G-AAA------------TGTA---T----------------CTTA--------------------ACT-TA----------------------------------TAATCTAATA-CGAAATGCGGCATTTGT----------C-AAAGGATATGCCCAGGAAATGCTGGCGCGCTATGGTATTTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dm3 chrX:2378073-2378415 - CAATGAAACCGCCAGCGTGTTTAAGGACACTGTATCCATTACCATAACCAGTAAGTAATGC-TCA-----TATGT-C-------CG--CA--------A-ATG------------TGTA---T----------------CAGTGCAT---------TAATCATTCG-CT----------------------------------TAACCTTATA-TAAATTGCGGCATTTAT----------C-AAAGGATATGCCCAGGAAATGCTGGCACGCTACGGTATTTTACATTTTTAA-ACAAAA---GATATGATTTTGTATATGAATATAACCACATTAA--------------------------------G------CA-----------------------CAC-----CATTAT-------------------------------------------------------------------------------------------------------------------------------CTATGAAA-GT--------------------------CATATTG------ACGCTCAGTA-TCATTTTCTTTAACTTAAAATGTACCCCACAGAGAAAGACCAGCTCTCACCGGCTGAGATTGTGAATTTGCCGAGCCACGTT
droSim2 x:2192374-2192715 - dsi_11479 CAATGAAACCGCCAGCGTGTTTAAGGACACTGTATCCATTACCATAACCAGTAAGTAATGC-TCA-----TCTGT-C-------CG--CA--------A-ATG------------TGTA---C----------------CAATGCAT---------TAATCATTCG-CT----------------------------------TAACCTTATA-CAAATTGCCGCATTTAT----------C-AAAGGATATGCCCAGGAAATGCTGGCACGCTACGGTATTTTACATTTTTAA-ACATAA---GATATGATTTTGTATATGGATTTTACCTCATTAA--------------------------------G------CC----C-------------------CC------AATAT-------------------------------------------------------------------------------------------------------------------------------CTATGAAA-GC--------------------------CGTATTG------ACGCTCAGTA-TCCTTTTCTTAAACTTAAAATGTAACCCACAGAGAAGGACCAGCTCTCACCGGCTGAGATTGTGAATTTACCGAGCCACGTT
droSec2 scaffold_10:2153782-2154108 - CAATGAAACCGCCAGCGTGTTTAAGGACACCGTATCCATTACCATAACCAGTAAGTAATGC-TCA-----TCTGT-C-------CG--CA--------A-ATG------------TGTA---C----------------CAATGCAT---------TAATCATTCG-CT----------------------------------TAACCTTATA-CAAATTGCGGCATTTAT----------C-AAAGGATATGCCCAGGAAATGCTGGCACGCTACGGTATTTTACATTTTTAA-ACATAA---GATATGATTTTGTATATGGATTTTACCTCATTAA--------------------------------G------CA-----------------------TA-----------------------------------------------------------------------------------------------------------------------------------------------------C--------------------------CATATTG------ACGCTCAGTA-TCCTTTTATTAAACTTAAAATGTAACCCACAGAGAAGGACCAGCTCTCACCGGCTGAGATTGTGAATTTACCGAGCCACGTT
droYak3 X:5967467-5967790 + CAACGAAACTGCCATCGTGTCTAAGGACTCTGTATCCATTACCATAACCAGTAAGTAATGC-TTA-----AC--AA--------AT--TA--------GCATTAGCAAAT-ATCAAATG---C----------------CAATAC-C---------TAATCAATCG-CT----------------------------------TAACCTTGTA-CCAATTGCGGCGTTTAT----------C-AAAGGATATGCCCAGGAAATGCTGGCACGCTACGGTATTTTACATTTTTAACACAAAG---AATAAGA-------------TTTAACCTCACTTA--------------------------------A------CA-----------------------CCC-----TATAAT-------------------------------------------------------------------------------------------------------------------------------CTATGAAACTTA--------------------------ATATTG------ACGCACGGTA-T-----------------ATTATACCCTACAGAGAAAGACCAGCTTTCACCGGCCGAGATTGTGAATTTGCCGAGCCAAGTG
droEre2 scaffold_4644:2327362-2327719 - CAACGAAACGGCCAGAGTGTATACGGACTCTGTATCCATTACCATATCCAGTAAGTAATGC-CTA--TA-TCTGT-C-------CG--CA--------A-ATG------------TTTG---C----------------CAATACCTATATC--GCTAACCAATCG-CT----------------------------------TAACCTTATA-CAAATTGCGGCATTTAT----------C-AAAGGATATGCCCAGGAAATGCTGGCACGCTACGGTATTTAACATTTTTAA-ACAAAT---TATATGAATTTGTATTACGATTTTTCCACATAAA--------------------------------G------CA-----------------------CATCTATGCATAAT-------------------------------------------------------------------------------------------------------------------------------CTATGTAAACC--------------------------CATATTG------ACGCACAGTA-TCCTTTGCTTTAACCCAAAATGTACCCCGCAGAGAAAGACCAGCTTTCACCGGCTGAGATTGTGAATTTGCCGAGCCACGTT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
CAATGAGACAATGCACGTGTACCAGGACACCGTCTCCGTCACCATATCACGTGAGTAAACC-GCT-----TCCCAG--------AG--TG--------GC-G---CTG---------------CCCCCTCTTT---------------------GCTAATCATTGA-C-------------------------------------ACTTCTTT-GACACTGCGGCTCTACC----------T-AAAGGATATGCCAAGGAAATGTTGGCTCGCTACGGTATCTAAGAATCTCCTC-----------------------------------------AA--------------------------------G------AATGCCCCAAAAATCCCCCATAAAATCC-----TTCAAT-------------------------------------------------------------------------------------------------------------------------------TGATTTGAGACGATAGTGAC--------------------------------TTTCTGATTTC--------------------CCTTTTGCAGAGGAAGGCCAGCGCTCGCCGGCCCGAATTGTGGACCTGCCCAACCATGTTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCGAATTGTGGACCTGCCCAACC.....2512.002200000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCCGAATTGTGGACCTGCCC.........2211.001010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATTGTGGACCTGCCCAACCATGT.2511.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGAATTGTGGACCTGCCC.........1911.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTCGCCGGCCCGAATTGTGGACCT.............2611.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCCGAATTGTGGACCTGCC..........2111.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTGGACCTGCCCAACCATGT.2311.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCGGCCCGAATTGTGGACCG.............2211.001100000
.........AATGCACGTGTACCAGGACACCGTCTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCGGCCCGAATTGTGGACCT.............2211.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCGGCCCGAATTGTGGACCTG............2311.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGAATTGTGGACCTGCC..........1811.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTCGCCGGCCCGAATTGTGGACCTGC...........2811.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCGAATTGTGGACCTGCCCAACC.....2411.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCGAATTGTGGACCTGCC..........2011.001100000
dp5
CAACGAGACAATGCACGTGTACCAGGACACCGTCTCCGTCACCATATCACGTGAGTAAACC-GCT-----TCCCAG--------AG--TG--------GC-G---CTG---------------CCCCCTCTTT---------------------GCTAATCATTGA-C-------------------------------------ACTTCTCT-GACACTGCGGCTCTACC----------T-AAAGGATATGCCAAGGAAATGTTGGCTCGCTACGGTATCTAAGAATCTCCTC-----------------------------------------AA--------------------------------G------AATGCCCCAAAAATCCCCCATAAAATCC-----TTCAAT-------------------------------------------------------------------------------------------------------------------------------TGATTTGAGACGATAGTGAC--------------------------------TTTCTGATTTC--------------------CCTTTTGCAGAGGAAGGCCAGCGCTCGCCGGCCCGAATTGTGGACCTGCCCAACCATGTTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..........ATGCACGTGTACCAGGACACC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000020000
........CAATGCACGTGTACCAGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTCGCCGGCCCGAATTGTGGAC...............2411.0010010000000
........CAATGCACGTGTACCAGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCAGCGCTCGCCGGCCCGAAT......................2311.0010100000000
...........................CACCGTCTCCGTCACCATAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010000000
droWil2
TGCTGAAACCTTTAGAGAATACAAGGACACTGTCTCCATTACCATAACAGGTGAGTGTAAG-ATA-----CTTTT-T-------TTAGAG--------GC------AACTC----TTAGTTT-ACTCCTTTTA---------------------CCTGATC--------TCTTTTGACATGCCTGC-ATACAAAA--AAAAAAC----------------------AAAAT----------A-TAAGAATATGCCATGGAAATGTTGGCTCGCTACGGTATCTATCTATATATA-AAC-----------GAATCC---------------------------------------------AACT--CTAGCCTCATGTTTGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATCCTTAAACA--------ATTTTA------TCATTTGATT------------------CTTTGATTTCTATAGAAATAGAACAAGAGTCGCCCGCACGCATTGTGTATTTGCCCAGTTATGTGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAGAGTCGCCCGCACGC........................2011.00100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCGCCCGCACGCATTGTGTATT..............2411.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACAAGAGTCGCCCGCACGCATTGT...................2711.00100100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATAGAACAAGAGTCGCCCG.............................2011.00110000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGAACAAGAGTCGCCC..............................1811.00110000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACAAGAGTCGCCCGCACGC........................2211.00100010
..............GAGAATACAAGGACACTGTCTCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
.GCTGAAACCTTTAGAGAATACAAGGAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00110000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCATTGTGTATTTGCCCAGTTATGT.2611.00100010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTGTATTTGCCCAGTTATGT.2311.00100100
..................ATACAAGGACACTGTCTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTATTTGCCCAGTTATGT.2011.00100010
.............AGAGAATACAAGGACACTGTCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
..................ATACAAGGACACTGTCTCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
.........CTTTAGAGAATACAAGGAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATAGAACAAGAGTCGCCCGCACG.........................2511.00110000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAGTCGCCCGCACGCATTG....................2111.00100100
droVir3
CAATCAGACCTCGCGCGTCTTCGAGGACAAGGTTTCCATCACCATATCAAGTGAGTGTCCA-CAT--TAACCTTAG--------GT--TA--------GC-G---CAA---------------CTAGAATTAA---------------------GCTAATCTCTTA-T-------------------------------------ACTAACTC-GTTACTGCGGCAATCGC----------CTCAAGGATATGCCAGCGAAATGTTGGCACGCTATGGTAGCTATTG------------AG---GATACATTTTGGTCTATTG-----------------------------------------------GCTCATGCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATGC-TAAT----------------CATTTCT------GCTGTCAATC--------------------TCTCAATCTCTAGATCAATCGCAACGCTCGCCCGCCCAGATCGTCAGTCTGCCCAGCACGGTGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......................GAGGACAAGGTTTCCATCACCATA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000010000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCGCAACGCTCGCCCGCC...........................2011.001000000000000000100000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCCCGCCCAGATCGTCAGTCT.............2311.001000000000000000000000000000000000000000000000000000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCCGCCCAGATCGTC..................1711.001000000000000000000000000000000000000000000000000000000010000000
....................TCGAGGACAAGGTTTCCATC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000100000000000000000000000000000000000000000000000
.AATCAGACCTCGCGCGTCTTCGAGGACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000100000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCCCGCCCAGATCGTCAGTCTGCCCAGC......3011.001000000000000000000000000000000000000000000000000000000000100000
....CAGACCTCGCGCGTCTTCGAGGACAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCCGCCCAGATCGTCAGTCT.............2211.001000000000000000000000010000000000000000000000000000000000000000
.........................GACAAGGTTTCCATCACCATATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000100000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGCTCGCCCGCCCAGATCGTCAGTCT.............2811.001000000000000000000000000000000000000000000000000000000000010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGCAACGCTCGCCCGCCCAG........................2211.001000100000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................TTG------------AG---GATACATTTTGGTCTATTG-----------------------------------------------GC..........................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000100000000000000000000000000000000000
droMoj3
CAACCAGACCTCTCGCGCCTACGAGGACATGGTCTCCATAACCATAACACGTAAGTCTCTTGCACACTA------TTGCT---T------TT-----------------------------------------------------------------------------------CTCAAGTCGGGATAAACAATCTAAAAAGTTAACTAATT-TGACATGCGGCATTTGT----------GTAAAGGATATGCCAAAGAAATGCTGGCACGCTATGGTAGCTATTGA------------G---GATTC--------------------------------------------------------------------------------------------------------A-------------------------------------------------------------------------------------------ATTGATTTCCTTTTCTTAATATCATCCTTACTAATATTCTCCCTTATCT--------------------------CGTTCTCGTTCTCCCTCTCGTT-CTC--------------------CCTCTCGCAGCGCATTCCCAACGCTCGCGCGCTCAGATTGTCAATCTGCCGCAGACGGTGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....CAGACCTCTCGCGCCTACGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
droGri2
CAACCAGACTCTGCGCGTCTTCAAGGATGAGGTCTCCATCACCATATCAAGTAAGTGCACG-TAT-----TCCAG-C-------TA--TG--------C-AAA--------------AG---C----------------AAAAAA-C-------TTAAACTAATCTTTC----------------------------------TAAACAAATT--CAAATGCGGCATTCGC----------CTCAAGGATATTCTGAAGAAATGTTGGCTCGCTATGGTAGCTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...CCAGACTCTGCGCGTCTTCAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110
............GCGCGTCTTCAAGGATGAGGTCTCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101
CAACCAGACTCTGCGCGTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110
.....AGACTCTGCGCGTCTTCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110
...............CGTCTTCAAGGATGAGGTCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110
............................GAGGTCTCCATCACCATATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110
...CCAGACTCTGCGCGTCTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110
......................AAGGATGAGGTCTCCATCACCATATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101
......................AAGGATGAGGTCTCCATCACCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110
..ACCAGACTCTGCGCGTCTTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110
.....................CAAGGATGAGGTCTCCATCACCATATC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00110
......GACTCTGCGCGTCTTCAAGGATGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101
........CTCTGCGCGTCTTCAAGGATGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101
.......................AGGATGAGGTCTCCATCACC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110
...................TTCAAGGATGAGGTCTCCATCACC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101
..ACCAGACTCTGCGCGTCTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110
.....................CAAGGATGAGGTCTCCATCACCATA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00110
..........CTGCGCGTCTTCAAGGATGAGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101
droAna3
CAATGAGACTAGCCACGTCTTCGAGGACACCGTTTCCATCACCATTTCCAGTAAGTCTACT-ACC-----TCAGA-T-------CC--TA--------G-AT---CAT---------------CTCCTTCTTTAAAATAGAAAAG-A-----AAACTGAACTCTTA--------------------------------------AACCCTTTT-TAAAATGCTGCCTTTTATAAAAAAAAAA-AAAGGATATGCCAAGGCCATGCTGGCAAGATACGGTACAGAATA-GATCCTC-----------------------------------------AA--------------------------------G------CT----C----------------------------------------------------------------------------------------------------------------------------------------------------------------CA-------GGATATCCGCTTTCCAGTTAATAATATT--------------------------------TTAAAATAATCTTCCCCCCACAGCTCATGCCCAGCGCTCTCCGGCCACGATTGTCAGCCTGCCCCAGACGGTGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........TAGCCACGTCTTCGAGGACACCGTTTCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.002200000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGATTGTCAGCCTGCCC.........1911.001010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCCCAGCGCTCTCCGGC............................1911.001100000
..........AGCCACGTCTTCGAGGACACC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCGCTCTCCGGCCACGATTGTCAGCC..............2811.001000001
..................CTTCGAGGACACCGTTTCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTCAGCCTGCCCCAGAC....1911.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACGATTGTCAGCCTGCCCCAG......2311.001010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATTGTCAGCCTGCCCCAGAC....2211.001000001
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGATTGTCAGCCTGCCCC........2011.001001000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCAGCCTGCCCCAGACGGT.2111.001001000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCACGATTGTCAGCCTGCCCCAGAC....2711.001010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTGTCAGCCTGCCCCAGAC....2111.001010000
........CTAGCCACGTCTTCGAGGAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
droBip1
CAACGAGACTGCACGCGTCTTCGAGGACACCGTTTCCATCACCATTTCCAGTAAGTCTTTC-AAC-----TTAGATCCTTTTT-T---------------TTG--------------AA-----TCCTTCTTTAAAATT-------------------CACCTT----G----------------------------------AAACCTTTTT-AAAAATGCGGCATTT--------------AAAGGATATGCCAAAGCCATGTTGGCTAGATACGGTATAACATA-GATC------------CCTATGGCTGAGGATATGCATTATCCCTC--TAA--------------------------------T------GA-----------------------T--------------------------------------------------------------------------------------------------------------------------------------------------------------AC-----------------TATATTT------TC----------------------------TCCCCCCACACAGCCCACGACCAACGCTCTCCGGCCCAGGTTGTTAGCCTGCCCCAGACCGTGSizeHit CountTotal NormTotal
No Reads
droKik1
CAATGACACCGAGAATCTGTTTGAGGATCGCATCTCCATTACCATTACCAGTGAGTTTTAG-CAT-TTA------TTGTT---T------TC---------------------------------------------------------------TTTAAT--------TTTTTTAATCTGTAAGA-TTAACAAT--TAAAAAT-AATTTATA-AAAATGCCTACGCTTAA----------C-GAAGGATATGCCAAGGAAATGCTGGCACGCTATGGTATTTCAAGCTTAG------------------A-------------TTTACCACTCTTTCCTTTTTTTTTTGAGACCCTTAACCCT--CTAAG------CC----C-------------------CA------AAAGTGCCTT-AAGGC--ACTAATTACTTTTTTCACAATTCTTTTTTACGTTTAAATATTTTTTTAATATTTTAAAGTGGCTTTAGAGGGTTTAAATTATTTTTTATATAT---------------------------------------------------------------------A-CTT--------------------ATCCCCCCCCCCACACACAGCTGAAAGCCAACGCCGACCCGCCCAGATTGTTAACCTGCCCAACCATGTTSizeHit CountTotal NormTotal
No Reads
droFic1
CAACGAGACCGCTCGCGTCTTCAAGGACCATGTCTCGATCACCATATCACGTGAGTATTAG-TTT-----TCTAA-C-------CC--TT--------A-ACA--------------TA---C----------------CAATAA-G---------TAATCATAAT-CA----------------------------------CGACCTTT----TAAATGCCGCATATAT----------C-AAAGGATATGCCAAGGAAATGCTGGCACGATACGGTACTTAAAGT-----------------ATATGATTTTA-------------TGTTAACAA-------------GAGCC----CACT--GTAGG------CA----C-------------------CT------TAAATGTTTCCAAGGTGTAGAAATT---------------------------------------------------------------------ATTGTTGTACTATTCTTTTTGATAT--------TTATTTTATTTAAACA--------------------------CATTTTGAA---------TTTTC-TACTTTTTTTGAACCCCAAACACCACCTATAGAGGATGGCCAGCGCTCTCCGGCTCAGATAGTCAATTTGCCGAACCACGTGSizeHit CountTotal NormTotal
No Reads
droEle1
CAAGGAAACCAACCGCGTCTTCAAGGATTCCGTCTCCATCACCATAACCCGTGAGTATTTG-TT-------CTGT-A-------CC--TA--------A-TTG--------------TA---T----------------CCATAC-T---------TTATCGTTCC-CC----------------------TAATCTAAAA--------AACA-AAAAATGCTGCATTATT----------C-AAAGGATATGCCCAGGAAATGCTGGCTCGCTATGGTATTTAAAGCTTTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
CACCGCAGACAATCGCATCTTCAAGGACTCTGTCTCCATTACCATAACTCGTGAGTATTGG-TTA-----TCTGT-C-------CC--TT--------C-ATG--------------AA---C----------------CCATTC-C---------TAACCGTACT-CA----------------------------------TAATCTCATA-CAAATTGCGGCATTTAT----------C-AAAGGATATGCCCAGGAAATGCTGACACGCTACGGTATTATACATTTTAAA-AACTAC--------------------------------ATTAA--------------------------------A------AAAGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
CAACGAAACCGGACGCATCTTCACGGATAACATCGTCATCACTGTTACCCGTGAGTACTGG-GGG-----TCCAT-A-------CC--TA--------G-AAA--------------TA---C----------------CAATAG-C---------TAATCGTATT-TA----------------------------------TAATCCCATA-AAAATTGCGGCATTTAT----------C-GAAGGTTATGCCGAGGAAATGTTGGCACGATACGGTACTTAAAATTCCCAA-AATTGA---TTTATGTTTTCA-------------TTTTAATAA-------------CTAGT----TATTTCTTTGG------TA----C-------------------CT------GCA-------------------------------------------------------------------------------------------------------------ATATTATCCCTATGAAT---ATATAAAT-CC--------------------------TAAGTTG------ACGTATTTCA-TCTTTTTCTTCTCTCCACAATTTAACCCTTAGCGACGGACCAACGCTCAGCGGCGGAGATTGTGGACTTGCCGAGCGAGGTGSizeHit CountTotal NormTotal
No Reads
droTak1
CAACGAGACCGGCCACAGCTTTACGGACCACGTCTCCATCACTGTTTCCCGTGAGTACCGG-TTA-----CCTAT-T-------CC--GTTTACCTATA-AAA------------TCTA---C----------------CAAATAGC---------TAATAACACT-TG----------------------------------TAATCTCACAAAAAATTGCGGCATTTAT----------C-AAAGGATATGCCCAGGAAATGCTGGCACGATACGGTACTTGAAATTTCCCA-GCAAAATTACATATTATATT-TAGA-AGATTATATTACATTTG--------------------------------G------CA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGATAAAAAC-----------------CATGTTT-----------------TC---TCTTTTACCAAAAAATGCAATCCTCAGAGGAGGATCAACGCTCGCCGGCTCACATTGTGGATTTGCCCAACGACGTGSizeHit CountTotal NormTotal
No Reads
droEug1
CAACGAAACCACACACGTCTTCAAGGACACCGTGTCCATCACCATTTCCCGTGAGTGCTGG-TTA-----TCTGT-C-------CT--TA--------G-AAA------------TGTA---T----------------CTTA--------------------ACT-TA----------------------------------TAATCTAATA-CGAAATGCGGCATTTGT----------C-AAAGGATATGCCCAGGAAATGCTGGCGCGCTATGGTATTTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
CAATGAAACCGCCAGCGTGTTTAAGGACACTGTATCCATTACCATAACCAGTAAGTAATGC-TCA-----TATGT-C-------CG--CA--------A-ATG------------TGTA---T----------------CAGTGCAT---------TAATCATTCG-CT----------------------------------TAACCTTATA-TAAATTGCGGCATTTAT----------C-AAAGGATATGCCCAGGAAATGCTGGCACGCTACGGTATTTTACATTTTTAA-ACAAAA---GATATGATTTTGTATATGAATATAACCACATTAA--------------------------------G------CA-----------------------CAC-----CATTAT-------------------------------------------------------------------------------------------------------------------------------CTATGAAA-GT--------------------------CATATTG------ACGCTCAGTA-TCATTTTCTTTAACTTAAAATGTACCCCACAGAGAAAGACCAGCTCTCACCGGCTGAGATTGTGAATTTGCCGAGCCACGTTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGATTGTGAATTTGCCGAGCCACGT.27118.00180000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001400000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000001012600000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGATTGTGAATTTGCCGA........2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGAAA-GT--------------------------CATATTG------ACGAGT.......................................................................................2215.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100100000000100000000000000000000000000000000000000000000
.........CGCCAGCGTGTTTAAGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
..........GCCAGCGTGTTTAAGGACACTGTATCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGATTGTGAATTTGCCGAGCCA....2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGATTGTGAATTTGCCGAGCCACG..2613.0030000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCAGCTCTCACCGGCTGAGATTGT...................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................ACACTGTATCCATTACCATAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................TTTAAGGACACTGTATCCATTACCATA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGATTGTGAATTTGCCGAGC......2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTCACCGGCTGAGATTG....................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGAGATTGTGAATTTGCCGAGC......2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000100000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGATTGTGAATTTGCCG.........1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TGTTTAAGGACACTGTATCCATTACCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CAGCGTGTTTAAGGACACTGTATCCAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACCGGCTGAGATTGTGA.................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTCACCGGCTGAGATTGTGAATTTGC...........2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTCACCGGCTGAGATTGTGAATTT.............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGATTGTGAATTTGCC..........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGCTCTCACCGGCTGAGATTGTGAAT...............2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACCGGCTGAGATTGTGAATTTGC...........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....GAAACCGCCAGCGTGTTTAAGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.AATGAAACCGCCAGCGTGTTTAAGGAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......ACCGCCAGCGTGTTTAAGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTCTCACCGGCTGAGATTGT...................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCACCGGCTGAGATTGTGA.................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
..............GCGTGTTTAAGGACACTGTATCCATT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGATTGTGAATTTGCCGAGCCAC...2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTGTGAATTTGCCGAGCCACGTT2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
....GAAACCGCCAGCGTGTTTAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............CGTGTTTAAGGACACTGTATCCATT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGCTCTCACCGGCTGAGAT......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCTCTCACCGGCTGAGATTGTA..................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCGGCTGAGATTGTGAATTTGCCGA........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCACCGGCTGAGATTGTGAATT..............2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCCACAGAGAAAGACCAGCTCTCACCGGC............................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............GCGTGTTTAAGGACACTGTATCCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TAAGGACACTGTATCCATTACCATAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACCAGCTCTCACCGGCTGAGGG......................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
CAATGAAACCGCCAGCGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TAAGGACACTGTATCCATTACCATAACC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTGAATTTGCCGAGCCAC...2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCACCGGCTGAGATTGTGAATTTGC...........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCAGCTCTCACCGGCTGAGATTGTG..................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGACCAGCTCTCACCGGC............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................CA-----------------------CAC-----CATTAT-------------------------------------------------------------------------------------------------------------------------------CTATGAAA-GT--------------------------..........................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTCACCGGCTGAGATTGTGAATTTG............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................TTTAT----------C-AAAGGATATGCCCAGGAAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGACCAGCTCTCACCGG.............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......AACCGCCAGCGTGTTTAAGGACACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...TGAAACCGCCAGCGTGTTTAAGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAAAGACCAGCTCTCACCGGCTGAGA.......................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGATTGTGAATTTGCCG.........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-TCATTTTCTTTAACTTAAAATGTACC........................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGACCAGCTCTCACCGGCTGAGAT......................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGAATTTGCCGAGCCACG..2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..........GCCAGCGTGTTTAAGGAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
...TGAAACCGCCAGCGTGTTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TTAAGGACACTGTATCCATTACCAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CAGCGTGTTTAAGGACACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGAAA-GT--------------------------CATATTG------ACGGGT.......................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTCACCGGCTGAGATTGTG..................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........CCGCCAGCGTGTTTAAGGACACTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTCTCACCGGCTGAGATTGTGAATTT.............2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................ATCCATTACCATAACCAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1950.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CAATGAAACCGCCAGCGTGTTTAAGGACACTGTATCCATTACCATAACCAGTAAGTAATGC-TCA-----TCTGT-C-------CG--CA--------A-ATG------------TGTA---C----------------CAATGCAT---------TAATCATTCG-CT----------------------------------TAACCTTATA-CAAATTGCCGCATTTAT----------C-AAAGGATATGCCCAGGAAATGCTGGCACGCTACGGTATTTTACATTTTTAA-ACATAA---GATATGATTTTGTATATGGATTTTACCTCATTAA--------------------------------G------CC----C-------------------CC------AATAT-------------------------------------------------------------------------------------------------------------------------------CTATGAAA-GC--------------------------CGTATTG------ACGCTCAGTA-TCCTTTTCTTAAACTTAAAATGTAACCCACAGAGAAGGACCAGCTCTCACCGGCTGAGATTGTGAATTTACCGAGCCACGTTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGATTGTGAATTTACCGAGCCACGT.27116.0016000000115000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGATTGTGAATTTACCGAGCCACGTT2815.00500000023000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGATTGTGAATTTACC..........1912.00200200000000000000
..........GCCAGCGTGTTTAAGGACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00220000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGATTGTGAATTTACCGAGCCACG..2712.00200200000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGACCAGCTCTCACCGGCT...........................2112.00200200000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTGAGATTGTGAATTTACCGAGCC.....2612.00200000000000002000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGCTGAGATTGTGAATTTACCA.........2311.00110000000000000000
.........CGCCAGCGTGTTTAAGGAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000000000000000
...TGAAACCGCCAGCGTGTTTAAGGACAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGAGATTGTGAATTTACC..........2011.00100100000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGATTGTGAATTTACCGAGCCACG..2611.00100000010000000000
......................AAGGACACTGTATCCATTACC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGAGATTGTGAATTTACCG.........2111.00100100000000000000
..................GTTTAAGGACACTGTATCCATTACC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000000000
....................TTAAGGACACTGTATCCATTACC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGGCTGAGATTGTGAATTTACCGAGC......2711.00100000010000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCGGCTGAGATTGTGAATTTACC..........2511.00100100000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGATTGTGAATTTACCGAGCCACG..2511.00100100000000000000
droSec2
CAATGAAACCGCCAGCGTGTTTAAGGACACCGTATCCATTACCATAACCAGTAAGTAATGC-TCA-----TCTGT-C-------CG--CA--------A-ATG------------TGTA---C----------------CAATGCAT---------TAATCATTCG-CT----------------------------------TAACCTTATA-CAAATTGCGGCATTTAT----------C-AAAGGATATGCCCAGGAAATGCTGGCACGCTACGGTATTTTACATTTTTAA-ACATAA---GATATGATTTTGTATATGGATTTTACCTCATTAA--------------------------------G------CA-----------------------TA-----------------------------------------------------------------------------------------------------------------------------------------------------C--------------------------CATATTG------ACGCTCAGTA-TCCTTTTATTAAACTTAAAATGTAACCCACAGAGAAGGACCAGCTCTCACCGGCTGAGATTGTGAATTTACCGAGCCACGTTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.....AAACCGCCAGCGTGTTTAAGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020020
........CCGCCAGCGTGTTTAAGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
............CAGCGTGTTTAAGGACACC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGACCAGCTCTCACCGGC............................2011.0010010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGATTGTGAATTTACCG.........1911.0010010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATTTACCGAGCCACGT.1811.0010010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGATTGTGAATTTACCGAGC......2211.0010010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAGGACCAGCTCTCACC...............................1911.0010001
droYak3
CAACGAAACTGCCATCGTGTCTAAGGACTCTGTATCCATTACCATAACCAGTAAGTAATGC-TTA-----AC--AA--------AT--TA--------GCATTAGCAAAT-ATCAAATG---C----------------CAATAC-C---------TAATCAATCG-CT----------------------------------TAACCTTGTA-CCAATTGCGGCGTTTAT----------C-AAAGGATATGCCCAGGAAATGCTGGCACGCTACGGTATTTTACATTTTTAACACAAAG---AATAAGA-------------TTTAACCTCACTTA--------------------------------A------CA-----------------------CCC-----TATAAT-------------------------------------------------------------------------------------------------------------------------------CTATGAAACTTA--------------------------ATATTG------ACGCACGGTA-T-----------------ATTATACCCTACAGAGAAAGACCAGCTTTCACCGGCCGAGATTGTGAATTTGCCGAGCCAAGTGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGAGATTGTGAATTTGC...........1912.00220000000000
....................CTAAGGACTCTGTATCCATTACC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.00220000000000
......AACTGCCATCGTGTCTAAGGACTCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTTCACCGGCCGAGATTGT...................2211.00101000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTTCACCGGCCGAGATTGTGA.................2411.00100100000000
.............ATCGTGTCTAAGGACTCTGTATCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACCGGCCGAGATTGTGAATTTGC...........2511.00100010000000
.........TGCCATCGTGTCTAAGGACTCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110000000000
................GTGTCTAAGGACTCTGTATCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACCAGCTTTCACCGGCCGAGATT.....................2511.00101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCGGCCGAGATTGTGAATTTGCCG.........2611.00100000100000
......AACTGCCATCGTGTCTAAGGACT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGATTGTGAATTTGCCGAGCCA....2411.00110000000000
.........TGCCATCGTGTCTAAGGAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000
................GTGTCTAAGGACTCTGTATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
....GAAACTGCCATCGTGTCTAAGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
...........CCATCGTGTCTAAGGACTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000000000
.........TGCCATCGTGTCTAAGGACTCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGATTGTGAATTTGCCGA........2011.00100000010000
......AACTGCCATCGTGTCTAAGGACTCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000
..ACGAAACTGCCATCGTGTCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGGCCGAGATTGTGAATT..............1911.00110000000000
droEre2
CAACGAAACGGCCAGAGTGTATACGGACTCTGTATCCATTACCATATCCAGTAAGTAATGC-CTA--TA-TCTGT-C-------CG--CA--------A-ATG------------TTTG---C----------------CAATACCTATATC--GCTAACCAATCG-CT----------------------------------TAACCTTATA-CAAATTGCGGCATTTAT----------C-AAAGGATATGCCCAGGAAATGCTGGCACGCTACGGTATTTAACATTTTTAA-ACAAAT---TATATGAATTTGTATTACGATTTTTCCACATAAA--------------------------------G------CA-----------------------CATCTATGCATAAT-------------------------------------------------------------------------------------------------------------------------------CTATGTAAACC--------------------------CATATTG------ACGCACAGTA-TCCTTTGCTTTAACCCAAAATGTACCCCGCAGAGAAAGACCAGCTTTCACCGGCTGAGATTGTGAATTTGCCGAGCCACGTTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
................GTGTATACGGACTCTGTAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGATTGTGAATTTGCCGAGCCACGT.2711.0011000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGATTGTGAATTTGCC..........1911.0010000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTCACCGGCTGAGATT.....................1911.0010100000
.....................TACGGACTCTGTATCCATTACCATA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
.........GGCCAGAGTGTATACGGACT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010001000
....................ATACGGACTCTGTATCCATTACC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000

Generated: 06/08/2015 at 03:00 PM