ID:

dpe_640

 Coordinate:

scaffold_103:23839-23989 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-6.4 -6.1

Flybase annnotation

exon [dper_GLEANR_16849:3]; CDS [Dper\GL15607-cds]; intron [Dper\GL15607-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CAGCAACAGTAACAGCTCCTGACGTTCTGTCCGAAACTCCCATTTGTATTCCAATACAGGATTCGGTTGGTATAAATATTTCCAATAACGTAACACTGCAGGCTCCAGACTCGAGAACCAACGCTCCTTATACTATAGGTGAGAATGCGTTACGTATCTGGCTACATACAATTTTAATTCTTGCTCTCTTTTACTTTTCAGAGCAATTGCCTGTACAGCGCCAAGACATCGTGGGTCAGACTCCAATCGTA
*****************************************************...(((..(((((((((...........)))))..)).))..)))................***************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M021
embryo
 V042
embryo
 M042
female body
 V111
male body		 V057
head
...........................................................................................................................................................................................................................GCCAAGACATCGTGGGTC.............. 18 0 1 10.00 10 9 0 1 0 0
.....................................................ATACAGGATTCGGTTGGT.................................................................................................................................................................................... 18 0 1 5.00 5 0 5 0 0 0
...........................................................................................AACACTGCAGGCTCCAGACTCGA......................................................................................................................................... 23 0 1 5.00 5 5 0 0 0 0
....................................................................................................................................................................................................................GTACAGCGCCAAGACATCGTGGGTC.............. 25 0 1 5.00 5 5 0 0 0 0
...........................................................................................................................................................................................................................GCCAAGACATCGTGGGTCA............. 19 0 1 4.00 4 4 0 0 0 0
......................................................................................AACGTAACACTGCAGGCT................................................................................................................................................... 18 0 1 3.00 3 3 0 0 0 0
....................................................................................................................................................................................................................GTACAGCGCCAAGACATCGTGG................. 22 0 1 3.00 3 0 2 1 0 0
............................................................................................ACACTGCAGGCTCCAGACTCG.......................................................................................................................................... 21 0 1 3.00 3 3 0 0 0 0
...........................................................................................AACACTGCAGGCTCCAGACTCGAG........................................................................................................................................ 24 0 1 3.00 3 3 0 0 0 0
...........................................................................................AACACTGCAGGCTCCAGACTCGAGAAC..................................................................................................................................... 27 0 1 2.00 2 2 0 0 0 0
..............................................................................................................................................................................................................................AAGACATCGTGGGTCAGACTCCA...... 23 0 1 2.00 2 1 0 1 0 0
..................................................................................CAATAACGTAACACTGCAGGCTCC................................................................................................................................................. 24 0 1 2.00 2 2 0 0 0 0
..........................................................................................TAACACTGCAGGCTCCAGACTCGAGAAC..................................................................................................................................... 28 0 1 2.00 2 2 0 0 0 0
..........AACAGCTCCTGACGTTCTGT............................................................................................................................................................................................................................. 20 0 1 2.00 2 2 0 0 0 0
......................................................................................................................CAACGCTCCTTATACTATAG................................................................................................................. 20 0 1 2.00 2 2 0 0 0 0
.........................................................................................GTAACACTGCAGGCTCCAGACTCGAGA....................................................................................................................................... 27 0 1 2.00 2 2 0 0 0 0
...........................................................................................AACACTGCAGGCTCCAGACTCGAGA....................................................................................................................................... 25 0 1 2.00 2 2 0 0 0 0
.........................................................................................GTAACACTGCAGGCTCCAGACTCGAGAAC..................................................................................................................................... 29 0 1 2.00 2 2 0 0 0 0
.......AGTAACAGCTGCTGACGTT................................................................................................................................................................................................................................. 19 1 1 1.00 1 0 0 0 1 0
...................................................................................AATAACGTAACACTGCAGGCTCC................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0
...........................................................................................AACACTGCAGGCGCCAGACTCGAGAAC..................................................................................................................................... 27 1 1 1.00 1 1 0 0 0 0
..........AACAGCTCCTGACGTTCTGG............................................................................................................................................................................................................................. 20 1 1 1.00 1 1 0 0 0 0
............................................................................................ACACTGCAGGCTCCAGACT............................................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0
.........................................................................................GTAACACTGCAGGCTCCAGACTCGAG........................................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0
...........................................................................................................................................................................................................................GCCAAGACATCGTGGGTCAGACTCC....... 25 0 1 1.00 1 1 0 0 0 0
....................................................................................ATAACGTAACACTGCAGG..................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0
....................................................................................ATAACGTAACACTGCAGGCT................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
....................GACGTTCTGTCCGAAACTCCC.................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0
.......................................................................................ACGTAACACTGCAGGCTCCAGACT............................................................................................................................................ 24 0 1 1.00 1 1 0 0 0 0
............................................TGTATTCCAATACAGGATTCGGTT....................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0
....AACAGTAACAGCTCCTGACGTTCT............................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0
.........................................................................................GTAACACTGCAGGCTCCA................................................................................................................................................ 18 0 1 1.00 1 1 0 0 0 0
.............................................................................ATTTCCAATAACGTAACACTGCAGGCTCC................................................................................................................................................. 29 0 1 1.00 1 1 0 0 0 0
...............................................ATTCCAATAAAGGATTCGATTGGT.................................................................................................................................................................................... 24 2 1 1.00 1 0 1 0 0 0
.........................................................................................................CAGACTCGAGAACCAACGCTCCTC.......................................................................................................................... 24 1 1 1.00 1 1 0 0 0 0
...............................................................................................................................................................................................................................AGACATCGTGGTTCAGACTCC....... 21 1 1 1.00 1 1 0 0 0 0
...............................................ATTCCAATACAGGATTCGGGT....................................................................................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0
........................................................................................CGTAACACTGCAGGCTCCAGACT............................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0
...................................................................................AATAACGTAACACTGCAGG..................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0
........................................................................................................................................................................................................................AGCGCCAAGACATCGTGG................. 18 0 1 1.00 1 0 0 0 1 0
................................................TTCCAATACAGGATTCGGTTGGT.................................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0
...........................................................................................AACACTGCAGGCTCCAGACT............................................................................................................................................ 20 0 1 1.00 1 1 0 0 0 0
............................................................................................................................................................................................................AATTGCCTGTACAGCGCCAAGAC........................ 23 0 1 1.00 1 0 0 1 0 0
......................................................................................AACGTAACACTGCAGGCC................................................................................................................................................... 18 1 1 1.00 1 1 0 0 0 0
.......AGTAACAGCTCCTGACGT.................................................................................................................................................................................................................................. 18 0 1 1.00 1 0 0 0 0 1
.............................................................................ATTTCCAATAACGTAACACTGCAGG..................................................................................................................................................... 25 0 1 1.00 1 0 0 1 0 0
...........................................................................................AACACTGCAGGCTCCAGACTC........................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
............................................................................................ACACTGCAGGCTCCAGACTCGAG........................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0
................................................TTCCAATACAGGATTCGGTTG...................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0
...................TGACGTTCTGTCCGAAACTCCC.................................................................................................................................................................................................................. 22 0 1 1.00 1 0 0 1 0 0
.............................................................................ATTTCCAATAACGTAACACTGCAGGCT................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
......................................................................................AACGTAACACTGCAGGCTC.................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0
......................................................................................AACGTAACACTGCAGGCTCCAGACTCGAG........................................................................................................................................ 29 0 1 1.00 1 1 0 0 0 0
.......AGTAACAGCTCCTGACGTTCTGTCCGA......................................................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0
...............................................ATTCCAATACAGGATTCGGTTGGT.................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0
...........................................................................................................................................................................................................................GCCAAGACATCGTGGGTCAGACTCCA...... 26 0 1 1.00 1 1 0 0 0 0
.................................................................................................................................ATACTGTCGGTGAGAATGGGTT.................................................................................................... 22 3 2 0.50 1 0 0 0 0 1
...............................................................................................................................TTATGCTATAGGGGAGAA.......................................................................................................... 18 2 3 0.33 1 0 0 0 0 1
........................................................................................................................................TGGTGAGCATGCGTTGCGTA............................................................................................... 20 3 8 0.13 1 0 1 0 0 0
...............................................................................................................................TTAGACTATAGGGGAAAA.......................................................................................................... 18 3 20 0.05 1 0 0 0 0 1

Anti-sense strand reads

GTCGTTGTCATTGTCGAGGACTGCAAGACAGGCTTTGAGGGTAAACATAAGGTTATGTCCTAAGCCAACCATATTTATAAAGGTTATTGCATTGTGACGTCCGAGGTCTGAGCTCTTGGTTGCGAGGAATATGATATCCACTCTTACGCAATGCATAGACCGATGTATGTTAAAATTAAGAACGAGAGAAAATGAAAAGTCTCGTTAACGGACATGTCGCGGTTCTGTAGCACCCAGTCTGAGGTTAGCAT
*****************************************************************************************************************************************...(((..(((((((((...........)))))..)).))..)))................***************************************************** 		Read size # Mismatch Hit Count Total Norm Total V057
head
 M042
female body
 V111
male body
.......................................................................................................................................................................................................TCTCGTTAAAGGACATTACGC............................... 21 3 3 0.67 2 2 0 0
.......................................................................................................................................................................................................TCTCGATAACGGACATTACGC............................... 21 3 2 0.50 1 1 0 0
.....................................................................................................................................................................................................................ATGCCGCGGTGCTATAGCAC.................. 20 3 3 0.33 1 0 1 0
..........TTGTCGAGGAGTGGAAGA............................................................................................................................................................................................................................... 18 2 7 0.14 1 0 0 1
......................................................................................................................................................................................................................TGTCGCTGTTCTGTTGGACCC................ 21 3 12 0.08 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_103:23789-24039 + dpe_640 CAGCAACAGTAACAGCTCCT------------------------------GACGTTCT------GTCCGAAACTCCCAT---TTGTATTCCAATACAGGATTCGGTT---GGTATAAAT---------ATT---TCCAATAACGTAACACTGCAGGCTCCA---GACTCGAGAA------CCAACGCTC---CTTATA---CTATAGGTGAGAAT---------GC-----------------GTTACG------TAT-CTGGC---------------TAC-ATACAATTTTAAT----TCTTGC------TC-----------TCTTTTACTTTTCAGAGCAATTGCCTGTACAGCGCCAAGACA---TCGTGGGTCAGACTCCAATCGTA
dp5 Unknown_group_8:39607-39857 + CAGCAACAGTAACAGCTCCT------------------------------GACGTTCT------GTCCGAAACTCCCAT---TTGTATTCCAATACAGGATTCGGTT---GGTATAAAT---------ATT---TCCAATAACGTAACACTGCAGGCTCCA---GACTCGAGAA------CCAACGCTC---CTTATA---CTATAGGTGGGAAT---------GC-----------------GTTACG------TAT-CTGGC---------------TAC-ATACAATTTTAAT----TCTTGC------TC-----------TCTTTTACTTTTCAGAGCAATTGCCTGTACAGCGCCAAGACA---TCGTGGGTCAGACTCCAATCGTA
droWil2 scf2_1100000004943:716550-716795 + CACCAGCAGCATCAGCG---------------------------------ACTGT---------GACTACTTTACTGGA---TAGCATTCCACAGCCGGAGGCTACA---GGAATAATT---------GTT---TCTAGCACTGCAGTGGTACAGTCATCT---GACTTGAGAACTGTGACCAATATGC---CGTATA---TCCAAGGTGAATGC---------TT-----------------GTAATG------CTT-TTGG--------------TCCACAATCATGTTTTA-TTA--TTC-------TATCATTTTTTT------------------AATGAATATTAGATCAAAACTCAATTA---TTGTCGGCCAGACACCGGTTGTT
droVir3 scaffold_13052:810846-811084 - CAGCAGCAACGACAGCAGCC------------------------------ATCGTTCA------GCCAGATGTTCCGAT---GTGCTTTTCCCAGCCAGACGCTGGT---GGTATGTGT---------CTA---TCCAGTAGTGTGTCAGTCCCT---------GACCCAAGGG------CCCA---------CTACA---AATTAGGTATTTACACTAATCATCA-------------------------------ATAAT-----TTTCTCAAAT---------CGA------T----TTTTGT------CC-----------ACACTT-TGCTTCAGAACAAATTATCGCTCAGCGCCAGGATATTATCATGGGACAGACCCCGGTGGTA
droMoj3 scaffold_6498:1398999-1399177 + CTGCTACTGCGATTGCACCTGCTGCTCCGTCGTTAACGACATCAGCTGTCGTCGCGCA------TCCAGATGCCTCAAT---GTGCATCACCCAGCCAGATGCTGGC---GGCATCTGT---------TTACCCCCCAGCAGCGTGTTAATTCAAGGCCCA---GATGCGAGGC------CCAATATCC---AGTATA---AATTAGGTAACAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_14822:150752-151039 + TGTTGG-AACAACAGTAACT---------------ACGACAACAGCCGCCGTTGTCCAACCAAACCCAGATGTCCCAAT---CTGCATTTCCCAGCCAGATGCTGCT---AGCATCTGT---------CTA---GCGAATAACATGCTAATTCAAGGCCCG---GACTCAAGGG------CCAATGCCC---AGTTCA---AATTAGGTATATTAATTAA-CATCC-----------------AAAATG------TAT-ATTAATATACACTCTAAT---------AAA-TTTTAT----TACTTC------TC-----------ACAATTTGTATTTAGATCAAATTCCCGCTCACCGGCCAGATATTATAATGGGTCAGACCCCAGTGGTC
droAna3 scaffold_12947:1397437-1397539 - CATCTGCAACTGCA------------------------------------GC---TCC------TCTAGACTCAACAAT---TAGCATTCCCCCCCAAGATGCTATC---GGAACAAAT---------GTT---GAATGCAATGTAGCCTTACAAAGCTCA---GATTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000395031:18766-18897 + CAATAACAACATCTGTAACT------------------------------GCAGTTCC------TCCGGACTCGACAAT---AGGCATTTCCCTCCAAGATGCTATT---GGGACAAAT---------GTT---GAATGTAATGTAGCCTTACAAAGCTCA---GATTCTCGGA------TGACAACAC---CATATA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302413:99161-99477 + GACA-GCGGCAACGACTGCG------------------------------GCAGTTCT------TACTGAAGCTCATATAGCTCGGATTCCTCAGCAAGATGGTGGTGTTGGAATAATACATCAGCACAAT---TTAAGCAATTTACCAGCACTCGGATCCAACGATATACGAA------CTAATGCGCAGCCTTACAATGTCCCAATGGGTAAG---------CTTAAACCGTCGCAGAATATTATTTGTTGTAGTTCTAA---------------GTTAG-CACGGCTTTAT-CAATATATTGTATTGTATATAT-ATTTTATATTTGTATACTTCAGAACCAATAACAATACAACGTCCAGATG---CTGTAGGTCAAACTCCAATTGTA
droFic1 scf7180000454040:523445-523560 + CGG----------A------------------------------------GCAGTACT------CTCAGAAGGTCTAAT---ACGTACTCCACAGCAGGACATCGTT---GAAATAAAT---------AAC---TTAAGCAATATACCACTACAAGGATCT---GAGTCACGAA------ACAATGCGC---CTTACA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491238:221363-221436 + TAAAGCT-TA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C------AC-----------ATTTTTCTTTTGCAGAACCAGTACCAATAAACCGCCAAGAT------GTTGGGCAGACTCCAATCGTG
droRho1 scf7180000778020:22032-22148 - A----------GTA------------------------------------ACAGTCCT------TTCAGATGGCCCAAT---CCGTGTTCCACAGCAAGATGATGTT---GGAAATATT---------AAT---TTAAGCAATATACCATCACAAGGGTCT---GAATTAAGGA------CAACTGCAG---CTTACA---C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000301495:904448-904574 - CAAACACTCCCACA------------------------------------GTTGTCTT------GTCAGAAGGTCAAAT---ACGTATTCCACAGCAAGATACTGTT---GGAATAAAT---------AAT---TTAAGCAATACAACATCACAAGGATCC---GAAACACGGA------CAAATGCGT---CTTACA---C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000414551:8567-8693 + CAAACACATCGGCA------------------------------------GCAGGCCT------TACAGAAGGTCAAAT---ACGTATTCCACAGCAAGATAGTTCT---GGAATCAAT---------AAC---TTAAGCAATATAACATCACAAGCATCC---GAAGCACGGA------CAAACGCAC---CTTACA---C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000408984:280236-280358 + CAAACACATCGGCA------------------------------------GCTGTCCT------TTCAGAAGGTCCTAT---ACGTATTCCACAGCAAGATGGTGTT---GCAATCAGT---------AAT---TTAAGCAATATTATATCACAAGGATCC---GAATCACGGA------TAAACGCCT---CTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dm3 chr4:946266-946528 - CAAACACACCAGCA------------------------------------ACTGTCCT------TTCAGAAGGTCCAAT---ACGTATTCCACAGCAAGAAAGTGTT---GGTTTAAAT---------AAT---TTGACCAGTACATCATCACAAGGATCA---GAATCACGGA------CAAACGCGC---CTTATA---TCCCCATTGGTAAG---------TA-----------------GTTTGGGAAAACCTTTAAA---------------TTTAC-GTCAAATTTTA-CATAAGACCGATATGTTTTAATTATTAAA------TATTTTGCAGAAACAACACCAATAAGTCGAACAGAT------GTTGGGCCGACTCCAATCGTA
droSim2 4:740432-740678 - CAAACACACCAGCA------------------------------------ACTGTCCT------TTCAGAAGGTCCAAT---ACGTATTCCACAGCAAGATAGTGTT---GGTTTAAAT---------AGT---TTGACCAGTACATCATCACAAGGATCA---GAATCACGGA------CAAACGCGT---CTTATA---TCCCCATTGGTAAT---------TT-------------------------------TTAAG---------------TTTAC-GTCACATTTTA-CAA--TTCCGATATGTTTTTATTATGAAA------TATTTTGCAGAAACAACACCAATAAGTCGAACAGAT------GTTGGGCCGACTCCAATCGTA
droSec2 scaffold_30:648025-648273 - CAAACACACCAGCA------------------------------------ACTGTCCT------TTCAGAAGGTCCAAT---ACGTATTCCACAGCAAGATAGTGTT---GGTTTAAAT---------AAT---TTGACCAGTACATCATCACAAGGATCA---GAATCACGGA------CAAACGCGT---CTTATA---TCCCCATTGGTAAT---------TT-------------------------------TTAAG---------------TTTAC-GTCACATTTAA-CAATAGTCCGATATGTTTTTATTATGAAA------TATTTTGCAGAAACAACACCAATAAGTCGAACAGAT------GTTGGGCCGACTCCAATCGTA
droYak3 4:1014593-1014843 - CAAACACACCAGCA------------------------------------ACTGTCCT------TTCAGAAGGTCCAAT---ACGTATTCCACAGCAAGATAGTTTT---GGTATAAAT------------------------ACATCATCACAAGGATCA---GAATCAATGA------CTAATGCGT---CTTATA---GCCCCATTGGTAGG---------TA-----------------GTTTGGAAGATAGTTCAAA---------------AATAC-CTCACATTTTA-CAAGAGTCCGAAATGTATTTTTTTTTAAA------TATTTTCCAGAATCAACCCCAATAAGTCGCTCCGAT------GTTGGGCAGACGCCAATCGTA
droEre2 scaffold_4512:329018-329280 + CAAACACACCAGCA------------------------------------ACTGCCCA------TTCAGAAGGTCAAAT---ACGTATTTCACAGCCAGATAGTTTT---GGTATAAAT---------AAT---TTGGTCAGTTCATCATCACAAGGATCA---GAATCAAGGA------CAAACGCGT---CCTATA---GCCCCATTGGTAGG---------TA-----------------GTTTGGGAGATGCTTGAAG---------------TTTAC-CTCACATTTTA-CAACATGCCGAAATGTAATAATTATTTAA------TATTTTCCAGAATCAACACCAATAAGTCGAACAGAT------GTTGGGCAAACTCCAATAGTA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
CAGCAACAGTAACAGCTCCT------------------------------GACGTTCT------GTCCGAAACTCCCAT---TTGTATTCCAATACAGGATTCGGTT---GGTATAAAT---------ATT---TCCAATAACGTAACACTGCAGGCTCCA---GACTCGAGAA------CCAACGCTC---CTTATA---CTATAGGTGAGAAT---------GC-----------------GTTACG------TAT-CTGGC---------------TAC-ATACAATTTTAAT----TCTTGC------TC-----------TCTTTTACTTTTCAGAGCAATTGCCTGTACAGCGCCAAGACA---TCGTGGGTCAGACTCCAATCGTASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................................................................................................................................................................................................................................................................................................................................................................GCCAAGACA---TCGTGGGTC..............18110.0010910000
............................................................................................ATACAGGATTCGGTT---GGT........................................................................................................................................................................................................................................................................................1815.005005000
.................................................................................................................................................AACACTGCAGGCTCCA---GACTCGA..............................................................................................................................................................................................................................2315.005500000
...............................................................................................................................................................................................................................................................................................................................................................GTACAGCGCCAAGACA---TCGTGGGTC..............2515.005500000
......................................................................................................................................................................................................................................................................................................................................................................GCCAAGACA---TCGTGGGTCA.............1914.004400000
............................................................................................................................................AACGTAACACTGCAGGCT...........................................................................................................................................................................................................................................1813.003300000
...............................................................................................................................................................................................................................................................................................................................................................GTACAGCGCCAAGACA---TCGTGG.................2213.003012000
..................................................................................................................................................ACACTGCAGGCTCCA---GACTCG...............................................................................................................................................................................................................................2113.003300000
.................................................................................................................................................AACACTGCAGGCTCCA---GACTCGAG.............................................................................................................................................................................................................................2413.003300000
.................................................................................................................................................AACACTGCAGGCTCCA---GACTCGAGAA------C....................................................................................................................................................................................................................2712.002200000
.........................................................................................................................................................................................................................................................................................................................................................................AAGACA---TCGTGGGTCAGACTCCA......2312.002110000
........................................................................................................................................CAATAACGTAACACTGCAGGCTCC.........................................................................................................................................................................................................................................2412.002200000
................................................................................................................................................TAACACTGCAGGCTCCA---GACTCGAGAA------C....................................................................................................................................................................................................................2812.002200000
..........AACAGCTCCT------------------------------GACGTTCT------GT.......................................................................................................................................................................................................................................................................................................................................2012.002200000
.....................................................................................................................................................................................CAACGCTC---CTTATA---CTATAG..........................................................................................................................................................................................2012.002200000
...............................................................................................................................................GTAACACTGCAGGCTCCA---GACTCGAGA............................................................................................................................................................................................................................2712.002200000
.................................................................................................................................................AACACTGCAGGCTCCA---GACTCGAGA............................................................................................................................................................................................................................2512.002200000
...............................................................................................................................................GTAACACTGCAGGCTCCA---GACTCGAGAA------C....................................................................................................................................................................................................................2912.002200000
.........................................................................................................................................AATAACGTAACACTGCAGGCTCC.........................................................................................................................................................................................................................................2311.001100000
..........AACAGCTCCT------------------------------GACGTTCT------GG.......................................................................................................................................................................................................................................................................................................................................2011.001100000
..................................................................................................................................................ACACTGCAGGCTCCA---GACT.................................................................................................................................................................................................................................1911.001100000
...............................................................................................................................................GTAACACTGCAGGCTCCA---GACTCGAG.............................................................................................................................................................................................................................2611.001100000
......................................................................................................................................................................................................................................................................................................................................................................GCCAAGACA---TCGTGGGTCAGACTCC.......2511.001100000
..........................................................................................................................................ATAACGTAACACTGCAGG.............................................................................................................................................................................................................................................1811.001100000
..........................................................................................................................................ATAACGTAACACTGCAGGCT...........................................................................................................................................................................................................................................2011.001100000
..................................................GACGTTCT------GTCCGAAACTCCC............................................................................................................................................................................................................................................................................................................................2111.001100000
.............................................................................................................................................ACGTAACACTGCAGGCTCCA---GACT.................................................................................................................................................................................................................................2411.001100000
...................................................................................TGTATTCCAATACAGGATTCGGTT---...........................................................................................................................................................................................................................................................................................2411.001001000
....AACAGTAACAGCTCCT------------------------------GACGTTCT------.........................................................................................................................................................................................................................................................................................................................................2411.001100000
...............................................................................................................................................GTAACACTGCAGGCTCCA---.....................................................................................................................................................................................................................................1811.001100000
................................................................................................................................ATT---TCCAATAACGTAACACTGCAGGCTCC.........................................................................................................................................................................................................................................2911.001100000
...............................................................................................................................................................CA---GACTCGAGAA------CCAACGCTC---CTC......................................................................................................................................................................................................2411.001100000
..............................................................................................................................................CGTAACACTGCAGGCTCCA---GACT.................................................................................................................................................................................................................................2311.001100000
.........................................................................................................................................AATAACGTAACACTGCAGG.............................................................................................................................................................................................................................................1911.001001000
...................................................................................................................................................................................................................................................................................................................................................................AGCGCCAAGACA---TCGTGG.................1811.001000001
.......................................................................................TTCCAATACAGGATTCGGTT---GGT........................................................................................................................................................................................................................................................................................2311.001001000
.................................................................................................................................................AACACTGCAGGCTCCA---GACT.................................................................................................................................................................................................................................2011.001100000
.......................................................................................................................................................................................................................................................................................................................................................AATTGCCTGTACAGCGCCAAGAC...........................2311.001010000
............................................................................................................................................AACGTAACACTGCAGGCC...........................................................................................................................................................................................................................................1811.001100000
.......AGTAACAGCTCCT------------------------------GACGT..................................................................................................................................................................................................................................................................................................................................................1811.001000010
................................................................................................................................ATT---TCCAATAACGTAACACTGCAGG.............................................................................................................................................................................................................................................2511.001010000
.................................................................................................................................................AACACTGCAGGCTCCA---GACTC................................................................................................................................................................................................................................2111.001100000
..................................................................................................................................................ACACTGCAGGCTCCA---GACTCGAG.............................................................................................................................................................................................................................2311.001100000
.......................................................................................TTCCAATACAGGATTCGGTT---G..........................................................................................................................................................................................................................................................................................2111.001001000
...................T------------------------------GACGTTCT------GTCCGAAACTCCC............................................................................................................................................................................................................................................................................................................................2211.001010000
................................................................................................................................ATT---TCCAATAACGTAACACTGCAGGCT...........................................................................................................................................................................................................................................2711.001100000
............................................................................................................................................AACGTAACACTGCAGGCTC..........................................................................................................................................................................................................................................1911.001100000
............................................................................................................................................AACGTAACACTGCAGGCTCCA---GACTCGAG.............................................................................................................................................................................................................................2911.001100000
.......AGTAACAGCTCCT------------------------------GACGTTCT------GTCCGA...................................................................................................................................................................................................................................................................................................................................2711.001001000
......................................................................................ATTCCAATACAGGATTCGGTT---GGT........................................................................................................................................................................................................................................................................................2411.001001000
......................................................................................................................................................................................................................................................................................................................................................................GCCAAGACA---TCGTGGGTCAGACTCCA......2611.001100000
dp5
CAGCAACAGTAACAGCTCCT------------------------------GACGTTCT------GTCCGAAACTCCCAT---TTGTATTCCAATACAGGATTCGGTT---GGTATAAAT---------ATT---TCCAATAACGTAACACTGCAGGCTCCA---GACTCGAGAA------CCAACGCTC---CTTATA---CTATAGGTGGGAAT---------GC-----------------GTTACG------TAT-CTGGC---------------TAC-ATACAATTTTAAT----TCTTGC------TC-----------TCTTTTACTTTTCAGAGCAATTGCCTGTACAGCGCCAAGACA---TCGTGGGTCAGACTCCAATCGTASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................................................................................................................................................................................................................................................................................................................................................................CAGCGCCAAGACA---TCGTGG.................1913.0030200001000
..GCAACAGTAACAGCTCCT------------------------------GAC....................................................................................................................................................................................................................................................................................................................................................2112.0020200000000
.................................................................................................................................................AACACTGCAGGCTCCA---GACTCGAG.............................................................................................................................................................................................................................2412.0020000000020
...............................................................................................................................................................................................................................................................................................................................................................GTACAGCGCCAAGACA---TCGTGGGT...............2412.0020100001000
..........AACAGCTCCT------------------------------GACGTTCT------GTC......................................................................................................................................................................................................................................................................................................................................2112.0020100010000
......................................................................................................................................TCCAATAACGTAACACTGCAGG.............................................................................................................................................................................................................................................2212.0020200000000
............................................................................................ATACAGGATTCGGTT---GGT........................................................................................................................................................................................................................................................................................1812.0020000200000
......................................................................................ATTCCAATACAGGATTCGGTT---G..........................................................................................................................................................................................................................................................................................2212.0020200000000
.........................................................................................CCAATACAGGATTCGGTT---G..........................................................................................................................................................................................................................................................................................1912.0020100001000
...............................................................................................................................................................................................................................................................................................................................................................GTACAGCGCCAAGACA---TCGT...................2011.0010000001000
.................................................................................................................................................................................................................................................................................................................................................................ACAGCGCCAAGACA---TCGTGG.................2011.0010010000000
...........................................................................................................................................................................................................................................................................................................................................................GCCTGTACAGCGCCAAGAC...........................1911.0010100000000
......................................................................................................................................................TGCAGGCTCCA---GACTCGAGAA------CCAAC................................................................................................................................................................................................................2611.0010001000000
............................................................................................................................................AACGTAACACTGCAGGCTCCA---GACTC................................................................................................................................................................................................................................2611.0010100000000
.....................................................GTTCT------GTCCGAAACTCCCAT---T......................................................................................................................................................................................................................................................................................................................2111.0010100000000
..............................................................................................ACAGGATTCGGTT---GGTAG......................................................................................................................................................................................................................................................................................1811.0010000100000
...CAACAGTAACAGCTCCT------------------------------GACGTTCT------.........................................................................................................................................................................................................................................................................................................................................2511.0010100000000
.............................................................................................................................................................................A------CCAACGCTC---CTTATA---CTATAGA.........................................................................................................................................................................................2311.0010100000000
............................................................................................................................................................CTCCA---GACTCGAGAA------CCAACGCT.............................................................................................................................................................................................................2311.0010100000000
.......................................................................................................................................................................................ACGCTC---CTTATA---CTATAG..........................................................................................................................................................................................1811.0010100000000
........................................................................................................................................CAATAACGTAACACTGCAGG.............................................................................................................................................................................................................................................2011.0010010000000
............................................................................................ATACAGGATTCGGTT---GGTATAA....................................................................................................................................................................................................................................................................................2211.0010100000000
.......................................................................................................................................CCAATAACGTAACACTGCAGG.............................................................................................................................................................................................................................................2111.0010100000000
..................................................GACGTTCT------GTCCGAAACTCCCAT---TTGT...................................................................................................................................................................................................................................................................................................................2711.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................GCAATTGCCTGTACAGCGCCAAGACA---TC.....................2811.0010100000000
.....................................................GTTCT------GTCCGAAACTCCCAT---TTGTATC................................................................................................................................................................................................................................................................................................................2711.0010010000000
............................................................................................................................................AACGTAACACTGCAGGCTCCA---GA...................................................................................................................................................................................................................................2311.0010001000000
.....................................................................AAACTCCCAT---TTGTATTCCAAT...........................................................................................................................................................................................................................................................................................................2211.0010010000000
.....................................................................................................................................................................................................................................................................................................................................................GCAATTGCCTGTACAGCGC.................................1911.0010100000000
..........................................................................................................................................................GGCTCCA---GACTCGAGAA------CCA..................................................................................................................................................................................................................2011.0010100000000
.........................................................................................................................................................................GAGAA------CCAACGCTC---CTTATA---C...............................................................................................................................................................................................2111.0010100000000
....................................................................................GTATTCCAATACAGGATTCGGTT---...........................................................................................................................................................................................................................................................................................2311.0010100000000
............................................................................................................................................................CTCCA---GACTCGAGAA------CCAACGC..............................................................................................................................................................................................................2211.0010010000000
..GCAACAGTAACAGCTCCT------------------------------GACGTTCC------.........................................................................................................................................................................................................................................................................................................................................2611.0010010000000
............CAGCTCCT------------------------------GACGTTCT------GTCCG....................................................................................................................................................................................................................................................................................................................................2111.0010001000000
.................................................................................................................................TT---TCCAATAACGTAACACTGCAGG.............................................................................................................................................................................................................................................2411.0010100000000
............................................................................................................................................................CTCCA---GACTCGAGAA------CCAACGCTC---C........................................................................................................................................................................................................2511.0010100000000
...CAACAGTAACAGCTCCT------------------------------GACGTT.................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
........GTAACAGCTCCT------------------------------GACGTTCT------.........................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.......................................................TCT------GTCCGAAACTCCCAT---.......................................................................................................................................................................................................................................................................................................................1811.0010100000000
...................................................................................TGTATTCCAATACAGGATTCGGTT---G..........................................................................................................................................................................................................................................................................................2511.0010100000000
...........ACAGCTCCT------------------------------GACGTTCT------GTCC.....................................................................................................................................................................................................................................................................................................................................2111.0010000001000
..................................................................................................GATTCGGTT---GGTATAAAT---------ATT---TCC................................................................................................................................................................................................................................................................2411.0010100000000
............................................................................................................................................................CTCCA---GACTCGAGAA------CCAACG...............................................................................................................................................................................................................2111.0010100000000
............CAGCTCCT------------------------------GACGTTCT------GTCC.....................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................GTACAGCGCCAAGACA---TCGTGG.................2211.0010000100000
........GTAACAGCTCCT------------------------------GACGTTC................................................................................................................................................................................................................................................................................................................................................1911.0010010000000
....................................................................................GTATTCCAATACAGGATTCGGTT---GGT........................................................................................................................................................................................................................................................................................2611.0010010000000
.............................................................................................TACAGGATTCGGTT---GGTATA.....................................................................................................................................................................................................................................................................................2011.0010100000000
..GCAACAGTAACAGCTCCT------------------------------GA.....................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...........................................................................................AATACAGGATTCGGTT---GGTATAAAT---------.........................................................................................................................................................................................................................................................................2511.0010000100000
..............GCTCCT------------------------------GACGTTCT------GTCCG....................................................................................................................................................................................................................................................................................................................................1911.0010100000000
...............................................................................................................................................GTAACACTGCAGGCTCCA---GACT.................................................................................................................................................................................................................................2211.0010010000000
...................................................................CGAAACTCCCAT---TTGTATTCCAATACAG.......................................................................................................................................................................................................................................................................................................2811.0010100000000
.........................................................T------GTCCGAAACTCCCAT---TTGT...................................................................................................................................................................................................................................................................................................................2011.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................ACAGCGCCAAGACA---TCGTGGG................2111.0010000001000
droWil2
CACCAGCAGCATCAGCG---------------------------------ACTGT---------GACTACTTTACTGGA---TAGCATTCCACAGCCGGAGGCTACA---GGAATAATT---------GTT---TCTAGCACTGCAGTGGTACAGTCATCT---GACTTGAGAACTGTGACCAATATGC---CGTATA---TCCAAGGTGAATGC---------TT-----------------GTAATG------CTT-TTGG--------------TCCACAATCATGTTTTA-TTA--TTC-------TATCATTTTTTT------------------AATGAATATTAGATCAAAACTCAATTA---TTGTCGGCCAGACACCGGTTGTTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...............................................................................................................................................................CT---GACTTGAGAACTGTGACC...................................................................................................................................................................................................................2015.00520120
................................................................GACTACTTTACTGGA---TAGC...................................................................................................................................................................................................................................................................................................................1914.00400040
.............................................................................................................................................................ATCT---GACTTGAGAACTGTGAC....................................................................................................................................................................................................................2114.00440000
......................................................................................ATTCCACAGCCGGAGGCTACA---GGA........................................................................................................................................................................................................................................................................................2413.00300030
..............................................................................A---TAGCATTCCACAGCCGGAGGC..................................................................................................................................................................................................................................................................................................2213.00300030
.......................................................................................................................................CTAGCACTGCAGTGGTACAGT.............................................................................................................................................................................................................................................2113.00300030
.........................................................................................CCACAGCCGGAGGCTACA---GGA........................................................................................................................................................................................................................................................................................2113.00301020
..................................................................................................................................T---TCTAGCACTGCAGTGGTACAGT.............................................................................................................................................................................................................................................2313.00300030
..........................................................................................................................................GCACTGCAGTGGTACAGT.............................................................................................................................................................................................................................................1813.00300030
....AGCAGCATCAGCG---------------------------------ACTGT---------GACT.....................................................................................................................................................................................................................................................................................................................................2212.00220000
........................................................................................................................................TAGCACTGCAGTGGTACAGT.............................................................................................................................................................................................................................................2012.00200110
.................................................................................................................ATAATT---------GTT---TCTAGCACTGCAGTGGT..................................................................................................................................................................................................................................................2612.00200020
............CAGCG---------------------------------ACTGT---------GACTACTTTACTGG...........................................................................................................................................................................................................................................................................................................................2412.00200020
............................................................................................................................................................CATCT---GACTTGAGAACTGTGACC...................................................................................................................................................................................................................2312.00220000
..........................................................................................................................................GCACTGCAGTGGTACAGTC............................................................................................................................................................................................................................................1912.00200020
................................................................................................................................................................T---GACTTGAGAACTGTGAC....................................................................................................................................................................................................................1812.00220000
.......................................................................................................................................................................TTGAGAACTGTGACCAATATGC---C........................................................................................................................................................................................................2312.00210010
......................................................................................................................................................................................AATATGC---CGTATA---TCCAAG..........................................................................................................................................................................................1912.00200020
.....................................................................................................................TT---------GTT---TCTAGCACTGCAGTGG...................................................................................................................................................................................................................................................2111.00100010
.......AGCATCAGCG---------------------------------ACTGT---------GACTACTTT................................................................................................................................................................................................................................................................................................................................2411.00100010
...........................................................................................................................................................TCATCT---GACTTGAGAACT.........................................................................................................................................................................................................................1811.00110000
...................................................................................................................AATT---------GTT---TCTAGCACTGCAGTGGT..................................................................................................................................................................................................................................................2411.00100010
..................................................................................TAGCATTCCACAGCCGGAGGCT.................................................................................................................................................................................................................................................................................................2211.00100100
.............................................................................................................................................................................................................................................................................................................................................................................TA---TTGTCGGCCAGACACCGGTT...2211.00100010
.....................................................................................................................................................................ACTTGAGAACTGTGACCAATATGC---.........................................................................................................................................................................................................2411.00100010
...........................................................................................................................................................................GAACTGTGACCAATATGC---CGT......................................................................................................................................................................................................2111.00100100
................G---------------------------------ACTGT---------GACTACTTTACTGGA---TAGCATT................................................................................................................................................................................................................................................................................................................2811.00100100
.....................................................GT---------GACTACTTTACTGGA---TAGC...................................................................................................................................................................................................................................................................................................................2111.00100010
...................................................................................AGCATTCCACAGCCGGAGGCT.................................................................................................................................................................................................................................................................................................2111.00100100
......................................................................................................................................................................CTTGAGAACTGTGACCAATATGC---C........................................................................................................................................................................................................2411.00100010
..........................................................................................................................................................GTCATCT---GACTTGAGAACTGT.......................................................................................................................................................................................................................2111.00100010
....................................................................................................................................................................................................................................................................................................................................................................AAACTCAATTA---TTGTCGGCCAGACACCGG.....2911.00110000
.........................................................................ACTGGA---TAGCATTCCACAGCCGGAGGC..................................................................................................................................................................................................................................................................................................2711.00100010
CACCAGCAGCATCAGCG---------------------------------ACT....................................................................................................................................................................................................................................................................................................................................................2011.00100010
...............................................................................................................................................................CT---GACTTGAGAACTGTGACCA..................................................................................................................................................................................................................2111.00100010
....................................................................................................................ATT---------GTT---TCTAGCACTGCAGTGG...................................................................................................................................................................................................................................................2211.00100010
..........................................................................................................................................GCACTGCAGTGGTACAGTCATCT---.....................................................................................................................................................................................................................................2311.00101000
.....................................................................................CATTCCACAGCCGGAGGCTACA---GGA........................................................................................................................................................................................................................................................................................2511.00100010
................................................................GACTACTTTACTGGA---TAGCAT.................................................................................................................................................................................................................................................................................................................2111.00100010
.....................................................................................................................................................................ACTTGAGAACTGTGACCAATATGC---CGT......................................................................................................................................................................................................2711.00100100
..........ATCAGCG---------------------------------ACTGT---------GACTACTTTACT.............................................................................................................................................................................................................................................................................................................................2411.00100010
...........................................................................................................................................................TCATCT---GACTTGAGAACTGTGACC...................................................................................................................................................................................................................2411.00110000
...................................................................................................................AATT---------GTT---TCTAGCACTGCAGT.....................................................................................................................................................................................................................................................2111.00100100
..................................................................................................................................................................................................................................................................................................................................................................CAAAACTCAATTA---TTGTCGGCCAGA...........2511.00100010
............................................................................................................................................................CATCT---GACTTGAGAACTGTG......................................................................................................................................................................................................................2011.00100010
...............................................................................................................................................................CT---GACTTGAGAACTGTGACCAATAT..............................................................................................................................................................................................................2511.00110000
......................................................................................ATTCCACAGCCGGAGGCTACA---GG.........................................................................................................................................................................................................................................................................................2311.00100100
............................................................................................CAGCCGGAGGCTACA---GGAATAATT---------GT.......................................................................................................................................................................................................................................................................2611.00100010
.....................................................................CTTTACTGGA---TAGCATTCC..............................................................................................................................................................................................................................................................................................................1911.00110000
..................................................................................................................................................................................................................................................................................................................................................................CAAAACTCAATTA---TTGTCGGCC..............2211.00110000
.....................................................................................................................TT---------GTT---TCTAGCACTGCAG......................................................................................................................................................................................................................................................1811.00100010
.............................................................................GA---TAGCATTCCACAGCCGG......................................................................................................................................................................................................................................................................................................1911.00100010
.ACCAGCAGCATCAGCG---------------------------------ACTGT---------GACT.....................................................................................................................................................................................................................................................................................................................................2511.00110000
..........ATCAGCG---------------------------------ACTGT---------GACTACTTTACTG............................................................................................................................................................................................................................................................................................................................2511.00100010
..............................................................................................................................................................TCT---GACTTGAGAACTGTGACCAATATGC---C........................................................................................................................................................................................................2911.00110000
................................................................................................................................GTT---TCTAGCACTGCAGTGG...................................................................................................................................................................................................................................................1911.00100010
................................................................................................................................................................T---GACTTGAGAACTGTGACC...................................................................................................................................................................................................................1911.00100100
....AGCAGCATCAGCG---------------------------------ACTGT---------GACG.....................................................................................................................................................................................................................................................................................................................................2211.00110000
................................................................GACTACTTTACTGGA---TAGCA..................................................................................................................................................................................................................................................................................................................2011.00100010
...............................................................................................................................................................................................................................................................................................................................................................GATCAAAACTCAATTA---TTGTCGGCC..............2511.00110000
..............................................................................A---TAGCATTCCACAGCCGGA.....................................................................................................................................................................................................................................................................................................1911.00100010
............................................................................................................................................................CATCT---GACTTGAGAACTGTGACCAAT................................................................................................................................................................................................................2611.00110000
............................................................................................................................................................CATCT---GACTTGAGAACTGT.......................................................................................................................................................................................................................1911.00101000
.........................................................................................CCACAGCCGGAGGCTACA---GG.........................................................................................................................................................................................................................................................................................2011.00100001
........................................................................................................ACA---GGAATAATT---------GTT---TCTAGCACTGC........................................................................................................................................................................................................................................................2611.00100010
................................................................GACTACTTTACTGGA---TAGCATT................................................................................................................................................................................................................................................................................................................2211.00101000
..............................................................................A---TAGCATTCCACAGCCGGAG....................................................................................................................................................................................................................................................................................................2011.00100010
......................................................................................................................................................................CTTGAGAACTGTGACCAATATGC---CGT......................................................................................................................................................................................................2611.00100010
.....................................................................................CATTCCACAGCCGGAGGCTACA---GG.........................................................................................................................................................................................................................................................................................2411.00100010
......................................................................................................................................TCTAGCACTGCAGTGGTACAGT.............................................................................................................................................................................................................................................2211.00100010
..............................................................................A---TAGCATTCCACAGCCGGG.....................................................................................................................................................................................................................................................................................................1911.00100010
................................................................................................................................................................T---GACTTGAGAACTGTGACCAATATGC---C........................................................................................................................................................................................................2711.00110000
.........................................................................................................................................................................GAGAACTGTGACCAATATGC---CGT......................................................................................................................................................................................................2311.00110000
....................................................................................GCATTCCACAGCCGGAGGCTACA---GGA........................................................................................................................................................................................................................................................................................2611.00100010
.................................................................................................................ATAATT---------GTT---TCTAGCACTGCAGTG....................................................................................................................................................................................................................................................2411.00100010
..................................................................................................................................................................................................................................................................................................................................................................CAAAACTCAATTA---TTGTCGGC...............2111.00100010
.....................................................GT---------GACTACTTTACTGGA---TAGCATT................................................................................................................................................................................................................................................................................................................2411.00100010
droVir3
CAGCAGCAACGACAGCAGCC------------------------------ATCGTTCA------GCCAGATGTTCCGAT---GTGCTTTTCCCAGCCAGACGCTGGT---GGTATGTGT---------CTA---TCCAGTAGTGTGTCAGTCCCT---------GACCCAAGGG------CCCA---------CTACA---AATTAGGTATTTACACTAATCATCA-------------------------------ATAAT-----TTTCTCAAAT---------CGA------T----TTTTGT------CC-----------ACACTT-TGCTTCAGAACAAATTATCGCTCAGCGCCAGGATATTATCATGGGACAGACCCCGGTGGTASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...................................................................................................................GTGT---------CTA---TCCAGTAGTGTGTC.....................................................................................................................................................................................................................................................2113.003000000000000000000002001000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................ATGGGACAGACCCCGGTGGT.2013.003000000000000010001000000000000000000010000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................AAATTATCGCTCAGCGCCAGG.............................2113.003001000000000000001100000000000000000000000000000000000000000000
.................................................................................................................ATGTGT---------CTA---TCCAGTAGTGT........................................................................................................................................................................................................................................................2012.002000000020000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................GAACAAATTATCGCTCAGCGC.................................2112.002002000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................A---TCCAGTAGTGTGTCAGTCCCT---------GACCCAA..............................................................................................................................................................................................................................2911.001000100000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................AATTATCGCTCAGCGCCAG..............................1911.001000000000000000000000000000000000010000000000000000000000000000
.......AACGACAGCAGCC------------------------------ATCGTT.................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000010000000000000000000000000000000000000000000
.........................................................A------GCCAGATGTTCCGAT---GTGC...................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................AAATTATCGCTCAGCGCCAGGAT...........................2311.001000000000000000000000000000000000000100000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................ATTATCATGGGACAGACCCCGGT....2311.001000000000000000000000010000000000000000000000000000000000000000
..........GACAGCAGCC------------------------------ATCGTTCA------GC.......................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000010000000000000000000000000
..................................................................CAGATGTTCCGAT---GTGCTTTTCCC............................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000001000000000000000000000000000000
......CAACGACAGCAGCC------------------------------ATCGTTCA------GCC......................................................................................................................................................................................................................................................................................................................................2511.001000000000000001000000000000000000000000000000000000000000000000
....................................................CGTTCA------GCCAGATGTTCCGAT---GTGCTT.................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................ATCATGGGACAGACCCCGGT....2011.001000000000000000010000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................CAGCGCCAGGATATTATCATGGGAC..............2511.001100000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................GCTCAGCGCCAGGATATTAT......................2011.001000000000000000000010000000000000000000000000000000000000000000
............................................................................GAT---GTGCTTTTCCCAGCCAGACGCT.................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000001000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................AGAACAAATTATCGCTCAG....................................1911.001000000000000000000000000000000001000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................ACAAATTATCGCTCAGCGCCAG..............................2211.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................AGTAGTGTGTCAGTCCCT---------GC...................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000001000
........................................................................................................................................................................................................................................................................................................................................................AATTATCGCTCAGCGCCAGG.............................2011.001000000000000100000000000000000000000000000000000000000000000000
....AGCAACGACAGCAGCC------------------------------ATC....................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000010000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................GAACAAATTATCGCTCAGCGCCA...............................2311.001000000000000000000000100000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................CATGGGACAGACCCCGGTGGTA2211.001000000000000000000000000000000000000000000000000000000000001000
.........................................................................................................................................................................................................................................................................................................................................................ATTATCGCTCAGCGCCAGGATATTATCA....................2811.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................ATATTATCATGGGACAGACCCCGGTGGT.2811.001000000000000000000000010000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................AATTATCGCTCAGCGCCAGGAT...........................2211.001000000000000000000000000000000000000000000000000000000000000010
........................................................................................................GGT---GGTATGTGT---------CTA---TCCAGT.............................................................................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................CAAATTATCGCTCAGCGCCAGG.............................2211.001000000000000000000000000000000000000000000000000000000000000010
..................................................................................................GACGCTGGT---GGTATGTGT---------.........................................................................................................................................................................................................................................................................1811.001000000000000010000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................CAGCGCCAGGATATTATCATGGGA...............2411.001000100000000000000000000000000000000000000000000000000000000000
..........GACAGCAGCC------------------------------ATCGTTCA------GCC......................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
............................................................................................................................................................................GG------CCCA---------CTACA---AATTAGAAC.......................................................................................................................................................................................20140.071001000000000000000000000000000000000000000000000000000000000000
droMoj3
CTGCTACTGCGATTGCACCTGCTGCTCCGTCGTTAACGACATCAGCTGTCGTCGCGCA------TCCAGATGCCTCAAT---GTGCATCACCCAGCCAGATGCTGGC---GGCATCTGT---------TTACCCCCCAGCAGCGTGTTAATTCAAGGCCCA---GATGCGAGGC------CCAATATCC---AGTATA---AATTAGGTAACAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.................................................................................................................................................GTTAATTCAAGGCCCA---GATGCGA..............................................................................................................................................................................................................................2313.003200001
..............................CGTTAACGACATCAGCTGTCGTC....................................................................................................................................................................................................................................................................................................................................................2312.002200000
.....................................GACATCAGCTGTCGTCGCGC................................................................................................................................................................................................................................................................................................................................................2011.001000100
.............................................................................................AGCCAGATGCTGGC---GGCATCTGT---------T........................................................................................................................................................................................................................................................................2411.001100000
........................................ATCAGCTGTCGTCGCGCA------TCCAGATGC................................................................................................................................................................................................................................................................................................................................2711.001000001
.................................................CGTCGCGCA------TCCAGATGCCTCAAT---GTG....................................................................................................................................................................................................................................................................................................................2711.001100000
....................................................................................................................................................AATTCAAGGCCCA---GATGCGA..............................................................................................................................................................................................................................2011.001000001
...............................................................................................................................................GTGTTAATTCAAGGCCCA---GATGCGA..............................................................................................................................................................................................................................2511.001100000
.............................................................................AT---GTGCATCACCCAGCCAG......................................................................................................................................................................................................................................................................................................1911.001100000
........................................ATCAGCTGTCGTCGCGCA------TCCAGATGCCT..............................................................................................................................................................................................................................................................................................................................2911.001000001
.......................................................................GCCTCAAT---GTGCATCACCCAGCCAG......................................................................................................................................................................................................................................................................................................2511.001100000
....TACTGCGATTGCACCTGCTGCTC..............................................................................................................................................................................................................................................................................................................................................................................2311.001000100
..............................CGTTAACGACATCAGCTGTCGTCGCGCA------T........................................................................................................................................................................................................................................................................................................................................2911.001000010
.....................................................................................CATCACCCAGCCAGATGCTGGC---GGC........................................................................................................................................................................................................................................................................................2511.001100000
...........................................AGCTGTCGTCGCGCA------TCCAGATGCCTC.............................................................................................................................................................................................................................................................................................................................2711.001010000
..............................CGTTAACGACATCAGCTGTCGTCGCGC................................................................................................................................................................................................................................................................................................................................................2711.001100000
....................................CGACATCAGCTGTCGTCGCGC................................................................................................................................................................................................................................................................................................................................................2111.001100000
........................................ATCAGCTGTCGTCGCGCA------TCCAGA...................................................................................................................................................................................................................................................................................................................................2411.001100000
.........................................................................................................................................................AAGGCCCA---GATGCGAGGC------CCAATATCC---.........................................................................................................................................................................................................2711.001000010
...........ATTGCACCTGCTGCTCCGT...........................................................................................................................................................................................................................................................................................................................................................................1911.001100000
droGri2
TGTTGG-AACAACAGTAACT---------------ACGACAACAGCCGCCGTTGTCCAACCAAACCCAGATGTCCCAAT---CTGCATTTCCCAGCCAGATGCTGCT---AGCATCTGT---------CTA---GCGAATAACATGCTAATTCAAGGCCCG---GACTCAAGGG------CCAATGCCC---AGTTCA---AATTAGGTATATTAATTAA-CATCC-----------------AAAATG------TAT-ATTAATATACACTCTAAT---------AAA-TTTTAT----TACTTC------TC-----------ACAATTTGTATTTAGATCAAATTCCCGCTCACCGGCCAGATATTATAATGGGTCAGACCCCAGTGGTCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...............................................................................................................GCATCTGT---------CTA---GCGAATAACA.........................................................................................................................................................................................................................................................2111.00110
......................................ACAACAGCCGCCGTTGTC.................................................................................................................................................................................................................................................................................................................................................1820.50110
........................................................................................................................................................................................................................................................................................................................................................AATTCCCGCTCACCGGCCAG.............................2020.50110
............................................................................................................................................................................................................................................................................................................................................................................ATATTATAATGGGTCAGA...........1820.50110
.............................................................AAACCCAGATGTCCCAAT---CT.....................................................................................................................................................................................................................................................................................................................2020.50110
..............................................................AACCCAGATGTCCCAAT---CTGCA..................................................................................................................................................................................................................................................................................................................2220.50110
...................................ACGACAACAGCCGCCGTTGTCCA...............................................................................................................................................................................................................................................................................................................................................2320.50110
droAna3
CATCTGCAACTGCA------------------------------------GC---TCC------TCTAGACTCAACAAT---TAGCATTCCCCCCCAAGATGCTATC---GGAACAAAT---------GTT---GAATGCAATGTAGCCTTACAAAGCTCA---GATTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................................................................................................................................GTT---GAATGCAATGTAGCCT...................................................................................................................................................................................................................................................1912.002110000
......................................................................................ATTCCCCCCCAAGATGCTATC---GGAA.......................................................................................................................................................................................................................................................................................2512.002100010
..................................................GC---TCC------TCTAGACTCAACAAT---TAGC...................................................................................................................................................................................................................................................................................................................2412.002020000
......................................................................................................CTATC---GGAACAAAT---------GTT---GAATGCAAT..........................................................................................................................................................................................................................................................2612.002000020
......................................................................................................CTATC---GGAACAAAT---------GTT---GAATGCAAC..........................................................................................................................................................................................................................................................2611.001010000
..................................................................................................GATGCTATC---GGAACAAAT---------GTT---...................................................................................................................................................................................................................................................................2111.001001000
......................................................................................ATTCCCCCCCAAGATGCTATC---GG.........................................................................................................................................................................................................................................................................................2311.001000010
......................................................................................ATTCCCCCCCAAGATGCTATC---...........................................................................................................................................................................................................................................................................................2111.001010000
............CA------------------------------------GC---TCC------TCTAGACTCAACAAT---TAGC...................................................................................................................................................................................................................................................................................................................2611.001010000
.....................................................................................................................AT---------GTT---GAATGCAATGTAGCCTT..................................................................................................................................................................................................................................................2211.001010000
......................................................................................................................T---------GTT---GAATGCAATGTAGCCTTAC................................................................................................................................................................................................................................................2311.001100000
...................................................................................AGCATTCCCCCCCAAGATG...................................................................................................................................................................................................................................................................................................1911.001010000
............................................................................AAT---TAGCATTCCCCCCCAAGATGC..................................................................................................................................................................................................................................................................................................2411.001010000
...............................................................................................CAAGATGCTATC---GGAACAAAT---------.........................................................................................................................................................................................................................................................................2111.001000001
......................................................................................ATTCCCCCCCAAGATGCTATC---G..........................................................................................................................................................................................................................................................................................2211.001100000
..........TGCA------------------------------------GC---TCC------TCTAGACTCAACAAT---TAGC...................................................................................................................................................................................................................................................................................................................2811.001100000
.................................................................................................AGATGCTATC---GGAACAAAT---------.........................................................................................................................................................................................................................................................................1911.001001000
........................................................................................TCCCCCCCAAGATGCTATC---GG.........................................................................................................................................................................................................................................................................................2111.001100000
........................................................................................................ATC---GGAACAAAT---------GTT---GAATGCAATGT........................................................................................................................................................................................................................................................2611.001010000
..................................................................................................GATGCTATC---GGAACAAAT---------GTT---GAAT...............................................................................................................................................................................................................................................................2511.001000010
.......................................................................................TTCCCCCCCAAGATGCTATC---GGAAC......................................................................................................................................................................................................................................................................................2511.001010000
.......AACTGCA------------------------------------GC---TCC------TCTAGACT.................................................................................................................................................................................................................................................................................................................................2011.001010000
........................................................................................................ATC---GGAACAAAT---------GTT---GAATGC.............................................................................................................................................................................................................................................................2111.001010000
.................................................................CTAGACTCAACAAT---TAGC...................................................................................................................................................................................................................................................................................................................1811.001010000
....................................................................................................TGCTATC---GGAACAAAT---------GTT---GAATGC.............................................................................................................................................................................................................................................................2511.001100000
....................................................................................................................AAT---------GTT---GAATGCAATGTAGCCT...................................................................................................................................................................................................................................................2211.001010000
..................................................................................................................CAAAT---------GTT---GAATGCAATGTAGCC....................................................................................................................................................................................................................................................2311.001010000
..................................................................................................GATGCTATC---GGAACAAAT---------GTT---GA.................................................................................................................................................................................................................................................................2311.001100000
.....................................................................................................................AT---------GTT---GAATGCAATGTAGCCT...................................................................................................................................................................................................................................................2111.001010000
........................................................................................TCCCCCCCAAGATGCTATC---GGAACA.....................................................................................................................................................................................................................................................................................2511.001100000
........................................................................CAACAAT---TAGCATTCCCCCC..........................................................................................................................................................................................................................................................................................................2011.001100000
......................................................................................ATTCCCCCCCAAGATGCTATC---GGAAC......................................................................................................................................................................................................................................................................................2611.001010000
.........................................................................................................TC---GGAACAAAT---------GTT---GAAT...............................................................................................................................................................................................................................................................1811.001010000
...CTGCAACTGCA------------------------------------GC---TCC------TCTAGACT.................................................................................................................................................................................................................................................................................................................................2411.001010000
droBip1
CAATAACAACATCTGTAACT------------------------------GCAGTTCC------TCCGGACTCGACAAT---AGGCATTTCCCTCCAAGATGCTATT---GGGACAAAT---------GTT---GAATGTAATGTAGCCTTACAAAGCTCA---GATTCTCGGA------TGACAACAC---CATATA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
GACA-GCGGCAACGACTGCG------------------------------GCAGTTCT------TACTGAAGCTCATATAGCTCGGATTCCTCAGCAAGATGGTGGTGTTGGAATAATACATCAGCACAAT---TTAAGCAATTTACCAGCACTCGGATCCAACGATATACGAA------CTAATGCGCAGCCTTACAATGTCCCAATGGGTAAG---------CTTAAACCGTCGCAGAATATTATTTGTTGTAGTTCTAA---------------GTTAG-CACGGCTTTAT-CAATATATTGTATTGTATATAT-ATTTTATATTTGTATACTTCAGAACCAATAACAATACAACGTCCAGATG---CTGTAGGTCAAACTCCAATTGTASizeHit CountTotal NormTotal
No Reads
droFic1
CGG----------A------------------------------------GCAGTACT------CTCAGAAGGTCTAAT---ACGTACTCCACAGCAGGACATCGTT---GAAATAAAT---------AAC---TTAAGCAATATACCACTACAAGGATCT---GAGTCACGAA------ACAATGCGC---CTTACA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TAAAGCT-TA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C------AC-----------ATTTTTCTTTTGCAGAACCAGTACCAATAAACCGCCAAGAT------GTTGGGCAGACTCCAATCGTGSizeHit CountTotal NormTotal
No Reads
droRho1
A----------GTA------------------------------------ACAGTCCT------TTCAGATGGCCCAAT---CCGTGTTCCACAGCAAGATGATGTT---GGAAATATT---------AAT---TTAAGCAATATACCATCACAAGGGTCT---GAATTAAGGA------CAACTGCAG---CTTACA---C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
CAAACACTCCCACA------------------------------------GTTGTCTT------GTCAGAAGGTCAAAT---ACGTATTCCACAGCAAGATACTGTT---GGAATAAAT---------AAT---TTAAGCAATACAACATCACAAGGATCC---GAAACACGGA------CAAATGCGT---CTTACA---C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
CAAACACATCGGCA------------------------------------GCAGGCCT------TACAGAAGGTCAAAT---ACGTATTCCACAGCAAGATAGTTCT---GGAATCAAT---------AAC---TTAAGCAATATAACATCACAAGCATCC---GAAGCACGGA------CAAACGCAC---CTTACA---C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
CAAACACATCGGCA------------------------------------GCTGTCCT------TTCAGAAGGTCCTAT---ACGTATTCCACAGCAAGATGGTGTT---GCAATCAGT---------AAT---TTAAGCAATATTATATCACAAGGATCC---GAATCACGGA------TAAACGCCT---CTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
CAAACACACCAGCA------------------------------------ACTGTCCT------TTCAGAAGGTCCAAT---ACGTATTCCACAGCAAGAAAGTGTT---GGTTTAAAT---------AAT---TTGACCAGTACATCATCACAAGGATCA---GAATCACGGA------CAAACGCGC---CTTATA---TCCCCATTGGTAAG---------TA-----------------GTTTGGGAAAACCTTTAAA---------------TTTAC-GTCAAATTTTA-CATAAGACCGATATGTTTTAATTATTAAA------TATTTTGCAGAAACAACACCAATAAGTCGAACAGAT------GTTGGGCCGACTCCAATCGTASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....................................................................................................................................................ATCACAAGGATCA---GAATCACGGA------C....................................................................................................................................................................................................................24118.001800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000161100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................CCACAGCAAGAAAGTGTT---GGT........................................................................................................................................................................................................................................................................................21111.001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011
................................................................................................................................................................A---GAATCACGGA------CAAACGCGC---CTT......................................................................................................................................................................................................2316.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................AT------GTTGGGCCGACTCCAA.....1815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................GAACAGAT------GTTGGGCCGACTCC.......2215.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................AGAAAGTGTT---GGTTTAAAT---------AAT---TTG................................................................................................................................................................................................................................................................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......CACCAGCA------------------------------------ACTGTCCT------TTC......................................................................................................................................................................................................................................................................................................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................TCGAACAGAT------GTTGGGCC.............1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................TCGAACAGAT------GTTGGGCCGACTCCAA.....2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000001000000
................................................................................................AAGAAAGTGTT---GGTTTAAAT---------.........................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................AGAAGGTCCAAT---ACGTATTCC..............................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................AAGTCGAACAGAT------GTTGGGCCGACTCC.......2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................TCAGAAGGTCCAAT---ACGTATTCCAC............................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................GTAAG---------TA-----------------GTTTGGGAAAACCTTT......................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000100000000000000000
..........................................................................................................................................................................CGGA------CAAACGCGC---CTTATA---TCC.............................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................AGAAGGTCCAAT---ACGTAT.................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................AGCAAGAAAGTGTT---GGTTTAAAT---------.........................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................GTCCT------TTCAGAAGGTCCA............................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................CACCAATAAGTCGAACAGAT------GTTGGGC..............2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................ATTCCACAGCAAGAAAGTGTT---G..........................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................ATCA---GAATCACGGA------CAAACGC..............................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................TCA---GAATCACGGA------CAAACGCGC---C........................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................ATCACGGA------CAAACGCGC---C........................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................AAAGTGTT---GGTTTAAAT---------AAT---TTGA...............................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................CT------TTCAGAAGGTCCAAT---ACGTATT................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................T------TTCAGAAGGTCCAAT---ACGTATT................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
......................................................................................ATTCCACAGCAAGAAAGTGTT---GGTTT......................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
........................................................................................................................................................CAAGGATCA---GAATCACGGA------CAAACGCGC---C........................................................................................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................ACAAGGATCA---GAATCACGGA------C....................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................AACAGAT------GTTGGGCCGACTCCAAT....2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................GAACAGAT------GTTGGGCCGA...........1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................ATCA---GAATCACGGA------CAAACGCGC---C........................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................ATAAGTCGAACAGAT------GTTGGGCCGAC..........2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................GAACAGAT------GTTGGGCCGACTCCAAT....2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................TCA---GAATCACGGA------CAAACGCGC---CTTA.....................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................AATCACGGA------CAAACGCGC---CT.......................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................AACACCAATAAGTCGAACAGAT------GTTG.................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
......................................................................................ATTCCACAGCAAGAAAGTGTT---GG.........................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................ATCACGGA------CAAACGCGC---CTTATA---TCC.............................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................TCA---GAATCACGGA------CAAAC................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................TAAGTCGAACAGAT------GTTGGGCCGAC..........2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................CGAACAGAT------GTTGGGCCGACTCCAA.....2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................AATAAGTCGAACAGAT------GTTGGGCCGACT.........2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................AGGATCA---GAATCACGGA------CAAACGC..............................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................TCA---GAATCACGGA------CAAACGCGC---.........................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................AGCAAGAAAGTGTT---GGTTTAA....................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................GTCCT------TTCAGAAGGTCCAAT---C......................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................CAAGGATCA---GAATCACGGA------CAAA.................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................TAAGTCGAACAGAT------GTTGGGC..............2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000100000000
........................................................CT------TTCAGAAGGTCCAAT---ACGTATTC...............................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................GTAAG---------TA-----------------GTTTGGGAAAACCT........................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................CACCAATAAGTCGAACAGAT------GTTGG................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................ATCA---GAATCACGGA------CAAACG...............................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................ATCATCACAAGGATCA---GAATCACGGA------C....................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................CGGA------CAAACGCGC---CTTATA---................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................AAT---ACGTATTCCACAGCAAGAAAGT.................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................TTCCACAGCAAGAAAGTGTT---GGTT.......................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................AGTGTT---GGTTTAAAT---------AAT---TGA................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................TCATCACAAGGATCA---GAATCACGGA------CA...................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................ATCACGGA------CAAACGCGC---CTT......................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
...................................................................................CGTATTCCACAGCAAGAAA...................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................ACCAATAAGTCGAACAGAT------GTTGGGCC.............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
..........................................................................................................................................................AGGATCA---GAATCACGGA------CAAAC................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................TGTCCT------TTCAGAAGGTCCAAT---ACGT...................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001
................................................................................................................................................................................................................................................................................................ATTTTA-CATAAGACCGAT......................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
...................................................................AGAAGGTCCAAT---ACGTATTCCACA...........................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................GCGC---CTTATA---TCCCCATTGAA.....................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................CAGTACATCATCACAAGGATC.........................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................................AGGTCCAAT---ACGTATTCCACA...........................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................CGTATTCCACAGCAAGAAAGT.................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000
...........................................................................................................................................................GGATCA---GAATCACGGA------CAAACGCGC---CT.......................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
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droSim2
CAAACACACCAGCA------------------------------------ACTGTCCT------TTCAGAAGGTCCAAT---ACGTATTCCACAGCAAGATAGTGTT---GGTTTAAAT---------AGT---TTGACCAGTACATCATCACAAGGATCA---GAATCACGGA------CAAACGCGT---CTTATA---TCCCCATTGGTAAT---------TT-------------------------------TTAAG---------------TTTAC-GTCACATTTTA-CAA--TTCCGATATGTTTTTATTATGAAA------TATTTTGCAGAAACAACACCAATAAGTCGAACAGAT------GTTGGGCCGACTCCAATCGTASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
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....................................................................................................................................................ATCACAAGGATCA---GAATCACGGA------C....................................................................................................................................................................................................................2413.00303000000000000000
.................................................................................................................................................ATCATCACAAGGATCA---GAATCACGGA------C....................................................................................................................................................................................................................2713.00300200000000010000
..................................................................................................................................................................................................................................................................................................................................................................AGTCGAACAGAT------GTTGGGC..............1912.00220000000000000000
..............................................................................................................................................................................................................................................................................................................................................................AATAAGTCGAACAGAT------GTTGGGCC.............2412.00211000000000000000
...................................................................................................................................................CATCACAAGGATCA---GAATCACG.............................................................................................................................................................................................................................2212.00201010000000000000
...............................................................................................................................................................CA---GAATCACGGA------CAAACGC..............................................................................................................................................................................................................1912.00200200000000000000
...................................................................................................................................................................................................................................................................................................................................................................GTCGAACAGAT------GTTGGGCCGA...........2112.00200010000001000000
..................................................................................................................................................................................................................................................................................................................................................................AGTCGAACAGAT------GTTGGGCC.............2011.00101000000000000000
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...............................................................................................CAAGATAGTGTT---GGTTTAAAT---------.........................................................................................................................................................................................................................................................................2111.00100010000000000000
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.........................................................T------TTCAGAAGGTCCAAT---ACGTATTCCAC............................................................................................................................................................................................................................................................................................................2711.00100000000001000000
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.........................................................T------TTCAGAAGGTCCAAT---ACGT...................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
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........................................................................................................................................................................................................................................................................................................................................................AACACCAATAAGTCGAACAGAT------.....................2211.00100100000000000000
..........................................................................................................................................................AGGATCA---GAATCACGGA------CAAAC................................................................................................................................................................................................................2211.00101000000000000000
................................................................................................................................................CATCATCACAAGGATCA---GAATCACG.............................................................................................................................................................................................................................2511.00100010000000000000
..........................................................................................................................................................AGGATCA---GAATCACGGA------CAAACGCGT---C........................................................................................................................................................................................................2711.00100000010000000000
........................................................................................................................................GACCAGTACATCATCACAAG.............................................................................................................................................................................................................................................2011.00101000000000000000
................................................................................................................................................................................................................................................................................................................................................................TAAGTCGAACAGAT------GTTGGGC..............2111.00110000000000000000
..............................................................................................................................................................................................................................................................................................................................................................AATAAGTCGAACAGAT------GTTGGGCCGAC..........2711.00110000000000000000
......................................................................................................................................................................................................................................................................................................................................................................GAACAGAT------GTTGGGCCGACTC........2111.00101000000000000000
.......................................................................................................................................................ACAAGGATCA---GAATCACGGA------C....................................................................................................................................................................................................................2111.00101000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................CGAACAGAT------GTTGGGCCGACT.........2111.00110000000000000000
................................................................................................................TTTAAAT---------AGT---TTGACCAGTACATC.....................................................................................................................................................................................................................................................2411.00100010000000000000
..................................................................................................................TAAAT---------AGT---TTGACCAGTACAT......................................................................................................................................................................................................................................................2111.00101000000000000000
......................................................................................................................................................CACAAGGATCA---GAATCAC..............................................................................................................................................................................................................................1811.00100100000000000000
.............................................................................................AGCAAGATAGTGTT---GGT........................................................................................................................................................................................................................................................................................1711.00100000010000000000
.....................................................................................................................................................TCACAAGGATCA---GAATCACGGA------C....................................................................................................................................................................................................................2311.00101000000000000000
................................................................................................................................................CATCATCACAAGGATCA---GAATCACGGA------.....................................................................................................................................................................................................................2711.00100100000000000000
..........................................................................................................................................................AGGATCA---GAATCACGGA------CAAACGCGT---CT.......................................................................................................................................................................................................2811.00100000000010000000
...........................................................................................................................................................GGATCA---GAATCACGGA------CAAAC................................................................................................................................................................................................................2111.00110000000000000000
.......................................................................................................................................TGACCAGTACATCATCACAAGGATCA---GA...................................................................................................................................................................................................................................2811.00100010000000000000
..................................................................................ACGTATTCCACAGCAAG......................................................................................................................................................................................................................................................................................................1711.00100000000001000000
..........................................................................................................................................................................................................................................................................................................................................................CACCAATAAGTCGAACAGAT------G....................2111.00110000000000000000
...................................................................................................................................................CATCACAAGGATCA---GAATCACGGA------.....................................................................................................................................................................................................................2411.00100100000000000000
..................................................................................................................................T---TTGACCAGTACATCATCACAAGGA...........................................................................................................................................................................................................................................2511.00100100000000000000
............................................................................................................................................AGTACATCATCACAAGGATCA---GAATCA...............................................................................................................................................................................................................................2711.00100000010000000000
........................................................................................................................................................CAAGGATCA---GAATCACGGA------CA...................................................................................................................................................................................................................2111.00110000000000000000
..........................................................................................................................................................................................................................................................................................................................................................CACCAATAAGTCGAACAGAT------GT...................2211.00100100000000000000
................................................................................................................................AGT---TTGACCAGTACATCATCACAAGGA...........................................................................................................................................................................................................................................2711.00100000010000000000
.........................................................................................................................................................AAGGATCA---GAATCACGGA------C....................................................................................................................................................................................................................1911.00100100000000000000
droSec2
CAAACACACCAGCA------------------------------------ACTGTCCT------TTCAGAAGGTCCAAT---ACGTATTCCACAGCAAGATAGTGTT---GGTTTAAAT---------AAT---TTGACCAGTACATCATCACAAGGATCA---GAATCACGGA------CAAACGCGT---CTTATA---TCCCCATTGGTAAT---------TT-------------------------------TTAAG---------------TTTAC-GTCACATTTAA-CAATAGTCCGATATGTTTTTATTATGAAA------TATTTTGCAGAAACAACACCAATAAGTCGAACAGAT------GTTGGGCCGACTCCAATCGTASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.............................................................................................................................................................ATCA---GAATCACGGA------CAAACGCGT---.........................................................................................................................................................................................................2312.0020020
..................................................................................................................................................................................................................................................................................................................................................................AGTCGAACAGAT------GTTGGGCC.............2012.0020011
.................................................................................................................................................ATCATCACAAGGATCA---GAATC................................................................................................................................................................................................................................2111.0010010
....................................................................................................................................................ATCACAAGGATCA---GAATCACGG............................................................................................................................................................................................................................2211.0010010
......................................................................................................................................................CACAAGGATCA---GAATCACGGA------C....................................................................................................................................................................................................................2211.0010100
...........................................................................................................................................................................................................................................................................................................................................................ACCAATAAGTCGAACAGAT------.....................1911.0010010
.........................................................................................................................................................AAGGATCA---GAATCACGGA------C....................................................................................................................................................................................................................1911.0010100
............................................................................................CAGCAAGATAGTGTT---GGT........................................................................................................................................................................................................................................................................................1811.0010010
...............................................................................................................................................................CA---GAATCACGGA------CAAACGCGT---.........................................................................................................................................................................................................2111.0010100
...........GCA------------------------------------ACTGTCCT------TTCAGAAGGT...............................................................................................................................................................................................................................................................................................................................2111.0010010
......................................................................................ATTCCACAGCAAGATAGTGTT---G..........................................................................................................................................................................................................................................................................................2211.0010010
.AAACACACCAGCA------------------------------------ACTGTC.................................................................................................................................................................................................................................................................................................................................................1911.0010010
...............................................................................................................................................................CA---GAATCACGGA------CAAACGC..............................................................................................................................................................................................................1911.0010010
............................................................................................................................................................GATCA---GAATCACGGA------CAAACGCGT---.........................................................................................................................................................................................................2411.0011000
......................................................................................ATTCCACAGCAAGATAGTGTT---GGT........................................................................................................................................................................................................................................................................................2411.0010010
......................................................................................ATTCCACAGCAAGATAGTGTT---GG.........................................................................................................................................................................................................................................................................................2311.0010010
...................................................................................................................................................CATCACAAGGATCA---GAATCACGGA------.....................................................................................................................................................................................................................2411.0011000
....................................................................................................................................................ATCACAAGGATCA---GAATCAC..............................................................................................................................................................................................................................2011.0010010
..................................................................................................................................................TCATCACAAGGATCA---GAATCACGGA------C....................................................................................................................................................................................................................2611.0010010
....................................................................................GTATTCCACAGCAAGATAGTGTT---GGT........................................................................................................................................................................................................................................................................................2611.0010010
.........................................................T------TTCAGAAGGTCCAAT---ACGTATTCCAC............................................................................................................................................................................................................................................................................................................2711.0010010
.................................................................................................................................................ATCATCACAAGGATCA---GAATCACGGA------C....................................................................................................................................................................................................................2711.0010010
.............................................................................................................................................................ATCA---GAATCACGGA------CAAACGCGT---CTT......................................................................................................................................................................................................2611.0010100
...ACACACCAGCA------------------------------------ACTGTCCT------.........................................................................................................................................................................................................................................................................................................................................1911.0010010
....................................................................................................................................................ATCACAAGGATCA---GAATCACGGA------C....................................................................................................................................................................................................................2411.0010010
......................................................................................................................................................................................................................................................................................................................................................................GAACAGAT------GTTGGGCCGA...........1811.0010010
..................................................................................................GATAGTGTT---GGTTTAAAT---------AA.......................................................................................................................................................................................................................................................................2011.0010100
............................................................................................................................................................................GA------CAAACGCGT---CTTATA---TCCCC...........................................................................................................................................................................................2211.0010010
..................................................................................................................................................................................................................................................................................................................................................................AGTCGAACAGAT------GTTGGGCCGACTCCA......2711.0010010
................................................................TTCAGAAGGTCCAAT---ACGT...................................................................................................................................................................................................................................................................................................................1911.0010010
droYak3
CAAACACACCAGCA------------------------------------ACTGTCCT------TTCAGAAGGTCCAAT---ACGTATTCCACAGCAAGATAGTTTT---GGTATAAAT------------------------ACATCATCACAAGGATCA---GAATCAATGA------CTAATGCGT---CTTATA---GCCCCATTGGTAGG---------TA-----------------GTTTGGAAGATAGTTCAAA---------------AATAC-CTCACATTTTA-CAAGAGTCCGAAATGTATTTTTTTTTAAA------TATTTTCCAGAATCAACCCCAATAAGTCGCTCCGAT------GTTGGGCAGACGCCAATCGTASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................................................................................................................................................GATCA---GAATCAATGA------CTAATGCGT---.........................................................................................................................................................................................................2413.00300000030000
..............................................................................................................................................................................................................................................................................................................................................................AATAAGTCGCTCCGAT------GTTGGGCAGA...........2613.00300000030000
...............................................................................................................................................................................................................................................................................................................................................................ATAAGTCGCTCCGAT------GTTGGGCA.............2312.00200000110000
................................................................................................................................................................................................................................................................................................................................................................TAAGTCGCTCCGAT------GTTGGGCAGA...........2412.00200100010000
........................................................................................................................................................................................................................................................................................................................................................AACCCCAATAAGTCGCTCCGAT------.....................2212.00201100000000
.............................................................................................................................................................................................................................................................................................................................................................CAATAAGTCGCTCCGAT------GTTGGGCA.............2512.00200000020000
....................................................................................................................................................ATCACAAGGATCA---GAATCAAT.............................................................................................................................................................................................................................2112.00200000020000
............................................................................................................................................................................................................................................................................................................................................................................AT------GTTGGGCAGACGCCAATC...2011.00100001000000
.AAACACACCAGCA------------------------------------ACTGTCC................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
...........................................................................................................................................................GGATCA---GAATCAATGA------CTAATGCGC---.........................................................................................................................................................................................................2511.00100100000000
.....................................................................................................................................................................................TAATGCGT---CTTATA---GCCCCATTGA......................................................................................................................................................................................2411.00100000010000
.....................................................GTCCT------TTCAGAAGGTCCAAT---ACGT...................................................................................................................................................................................................................................................................................................................2411.00100000010000
.....ACACCAGCA------------------------------------ACTGTCCT------TTCAGAAG.................................................................................................................................................................................................................................................................................................................................2511.00100100000000
......................................................................................................................................................................................................................................................................................................................................................................GCTCCGAT------GTTGGGCAGACGCC.......2211.00100100000000
.....................................................................................................................................................................AATCAATGA------CTAATGCGT---.........................................................................................................................................................................................................1811.00100100000000
.......................................................................................................................................................................................ATGCGT---CTTATA---GCCCCATT........................................................................................................................................................................................2011.00100000010000
.....................................................................................................................................................................................................................................................................................................................................................................CGCTCCGAT------GTTGGGCAGACGCCAAT....2611.00101000000000
.................................................................................................................................................................................................................................................................................................................................................................AAGTCGCTCCGAT------GTTGGGC..............2011.00100100000000
.................................................................................................................ATAAAT------------------------ACATCATCACAAGGATCA---GA...................................................................................................................................................................................................................................2611.00100000010000
.........................................................................................................................................................................................................................................................................................................................................................ACCCCAATAAGTCGCTCCGAT------.....................2111.00100100000000
............................................................................................................................................................................GA------CTAATGCGT---CTTATA---GCCCCATTGA......................................................................................................................................................................................2711.00100000010000
....................................................................................................................AAT------------------------ACATCATCACAAGGATCA---GAATCAAT.............................................................................................................................................................................................................................2911.00100000010000
..........................................................................CCAAT---ACGTATTCCACAGC.........................................................................................................................................................................................................................................................................................................1911.00100100000000
.....................................................................................................................................................................................................................................................................................................................................................................CGCTCCGAT------GTTGGGCAGACGCC.......2311.00100100000000
..........................................................................................................................................................................ATGA------CTAATGCGT---CTTATA---GCCCCATTGA......................................................................................................................................................................................2911.00100000010000
......................................................................................................................................................CACAAGGATCA---GAATCAAT.............................................................................................................................................................................................................................1911.00100000010000
...................................................................................................................................................................................................................................................................................................................................................................GTCGCTCCGAT------GTTGGGC..............1811.00110000000000
.........................................................T------TTCAGAAGGTCCAAT---ACGT...................................................................................................................................................................................................................................................................................................................2011.00100000010000
.............................................................................................................................................................ATCA---GAATCAATGA------CTAAT................................................................................................................................................................................................................1911.00101000000000
......................................................................................................................................................................................AATGCGT---CTTATA---GCCCCATTGA......................................................................................................................................................................................2311.00100000010000
.......................................................................................................................................................................................................................................................................................................................................................CAACCCCAATAAGTCGCTCC..............................2011.00100100000000
............................................................................................................................................................................GA------CTAATGCGT---CTTATA---GCCCCATT........................................................................................................................................................................................2511.00101000000000
.............................................................................AT---ACGTATTCCACAGCAAGATAGTTTT---G..........................................................................................................................................................................................................................................................................................2811.00101000000000
..................................................................................................................................................................................................................................................................................................................................................................AGTCGCTCCGAT------GTTGGGC..............1911.00101000000000
.....................................................................................................................................................................................................................................................................................................................................................................CGCTCCGAT------GTTGGGCAGA...........1911.00101000000000
.................................................................................................................................................................................................................................................................................................................................................................AAGTCGCTCCGAT------GTTGGGCA.............2111.00100000010000
................................................................................................................TATAAAT------------------------ACATCATCACAAGGATCA---G....................................................................................................................................................................................................................................2611.00101000000000
.....................................................................................TATTCCACAGCAAGATAGTTTT---...........................................................................................................................................................................................................................................................................................2211.00100000010000
....CACACCAGCA------------------------------------ACTGTCCT------TTCAGAAGG................................................................................................................................................................................................................................................................................................................................2711.00101000000000
...................................................................................................................................................CATCACAAGGATCA---GAATCAAT.............................................................................................................................................................................................................................2211.00100000010000
.....................................................................................................................................................................................................................................................................................................................................................................CGCTCCGAT------GTTGGGCAGACGCCAATC...2711.00100100000000
...............................................................................................................................................................................................................................................................................................................................................................ATAAGTCGCTCCGAT------GTTGGGC..............2211.00100010000000
droEre2
CAAACACACCAGCA------------------------------------ACTGCCCA------TTCAGAAGGTCAAAT---ACGTATTTCACAGCCAGATAGTTTT---GGTATAAAT---------AAT---TTGGTCAGTTCATCATCACAAGGATCA---GAATCAAGGA------CAAACGCGT---CCTATA---GCCCCATTGGTAGG---------TA-----------------GTTTGGGAGATGCTTGAAG---------------TTTAC-CTCACATTTTA-CAACATGCCGAAATGTAATAATTATTTAA------TATTTTCCAGAATCAACACCAATAAGTCGAACAGAT------GTTGGGCAAACTCCAATAGTASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...................................................................................................................................................CATCACAAGGATCA---GAATCAAGGA------C....................................................................................................................................................................................................................2513.0030100110
......................................................................................................................................................................................................................................................................................................................................................................GAACAGAT------GTTGGGCAAAC..........1913.0030201000
...............................................................................................................................................................................................................................................................................................................................................................ATAAGTCGAACAGAT------GTTGGGC..............2213.0030000120
......................................................................................................................................................................................................................................................................................................................................................................GAACAGAT------GTTGGGCAAACTCCA......2312.0021001000
.....................................................................................................................................................................................AAACGCGT---CCTATA---GCCCCATTGAAT....................................................................................................................................................................................2612.0020010100
.................................................................................................................................................................................................................................................................................................................................................................AAGTCGAACAGAT------GTTGGGC..............2012.0020200000
............................................................................................................................................................GATCA---GAATCAAGGA------CAAACGC..............................................................................................................................................................................................................2212.0020001100
......................................................................................................................................................CACAAGGATCA---GAATCAAGGA------C....................................................................................................................................................................................................................2212.0020100100
............CA------------------------------------ACTGCCCA------TTCAGAAGGT...............................................................................................................................................................................................................................................................................................................................2012.0020101000
....................................................................................................................................................................GAATCAAGGA------CAAACGCGT---C........................................................................................................................................................................................................2012.0020000110
.....................................................................................................................................................................................AAACGCGT---CCTATA---GCCCCATTG.......................................................................................................................................................................................2311.0010001000
............................................................................................................................................................GATCA---GAATCAAGGA------CAAACGCGT---.........................................................................................................................................................................................................2411.0010000010
.........................................................................................................................................................................................................................................................................................................................................................ACACCAATAAGTCGAACAGAT------GTTGG................2611.0010000010
...........GCA------------------------------------ACTGCCCA------TTCAGAAGGT...............................................................................................................................................................................................................................................................................................................................2111.0010001000
..................................................................................................GATAGTTTT---GGTATAAAT---------.........................................................................................................................................................................................................................................................................1811.0010000010
...................................................................................................................AAAT---------AAT---TTGGTCAGTTCAT......................................................................................................................................................................................................................................................2011.0011000000
.............................................................................................................................................................ATCA---GAATCAAGGA------CAAACGCGT---CCT......................................................................................................................................................................................................2611.0010001000
..................................................................................................................................................................................................................................................................................................................................................................AGTCGAACAGAT------GTTGGGC..............1911.0010000010
....................................................................................GTATTTCACAGCCAGATAGTTTT---GGC........................................................................................................................................................................................................................................................................................2611.0010100000
.............................................................................................................................................................ATCA---GAATCAAGGA------CAAACGCGT---C........................................................................................................................................................................................................2411.0010000100
......................................................................................................................T---------AAT---TTGGTCAGTTCATCAT...................................................................................................................................................................................................................................................2011.0010000100
....................................................................................................................................................ATCACAAGGATCA---GAATCAAGGA------.....................................................................................................................................................................................................................2311.0010100000
..........................................................................................................................................................AGGATCA---GAATCAAGGA------CAAACGCGT---.........................................................................................................................................................................................................2611.0010100000
..........................................................................CAAAT---ACGTATTTCACAGCCAGAC....................................................................................................................................................................................................................................................................................................2411.0010100000
.......................................................................GGTCAAAT---ACGTATTTCACAGCCAGAT....................................................................................................................................................................................................................................................................................................2711.0011000000
.....................................................................................................................................................................................AAACGCGT---CCTATA---GCCCC...........................................................................................................................................................................................1911.0010000100
................................................................................................................................AAT---TTGGTCAGTTCATCATC..................................................................................................................................................................................................................................................2011.0010100000
..................................................................................................................................T---TTGGTCAGTTCATCATCACA...............................................................................................................................................................................................................................................2111.0011000000
...ACACACCAGCA------------------------------------ACTGCCCA------TTCAGA...................................................................................................................................................................................................................................................................................................................................2511.0011000000
............................................................................................................................................AGTTCATCATCACAAGGATCA---.....................................................................................................................................................................................................................................2111.0010100000
.....................................................................................................................................................................................AAACGCGT---CCTATA---GCCCCATTGA......................................................................................................................................................................................2411.0010000010
................................................................................................................................................CATCATCACAAGGATCA---GAATCAAGGA------C....................................................................................................................................................................................................................2811.0010000010
....................................................................................................................AAT---------AAT---TTGGTCAGTTCATC.....................................................................................................................................................................................................................................................2011.0010000100
.............................................................................................................................................GTTCATCATCACAAGGATCA---GA...................................................................................................................................................................................................................................2211.0010000100
..........................................................................CAAAT---ACGTATTTCACAGCCA.......................................................................................................................................................................................................................................................................................................2111.0010000100
..............................................................................................................GGTATAAAT---------AAT---TTGGTCA............................................................................................................................................................................................................................................................1911.0010000010
...............................................................................................................................................................................................................................................................................................................................................................ATAAGTCGAACAGAT------GTTGGGCAA............2411.0010000010
.................................................................................................................................................ATCATCACAAGGATCA---GAATCAAGGA------C....................................................................................................................................................................................................................2711.0010000100
.....................................................................................................................................................TCACAAGGATCA---GAATCAAG.............................................................................................................................................................................................................................2011.0011000000
..................................................................................................................................................................................................................................................................................................................................................................AGTCGAACAGAT------GTTGGG...............1811.0010001000
............................................................................................................................................................GATCA---GAATCAAGGA------CAAACGCGT---C........................................................................................................................................................................................................2511.0010000100
........................................................................................................................................................................................................................................................................................................................................................AACACCAATAAGTCGAACAGAT------.....................2211.0010001000
..................................................................................................................TAAAT---------AAT---TTGGTCAGTTCATC.....................................................................................................................................................................................................................................................2211.0010000010
.................................................................................................................................................................................................................................................................................................................................................................AAGTCGAACAGAT------GTTGGG...............1911.0010000100

Generated: 06/08/2015 at 02:57 PM