ID:

dpe_629

 Coordinate:

scaffold_10:2795862-2795996 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [dper_GLEANR_9188:1]; CDS [Dper\GL26682-cds]; exon [dper_GLEANR_9188:2]; CDS [Dper\GL26682-cds]; intron [Dper\GL26682-in]

Repeatable elements

NameClassFamilyStrand
(CAG)nSimple_repeatSimple_repeat+

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------##################################################
ATGACTACGACGACGACGACGACGACAGCAACCACCTCATCCTCATCCTCGTCGAGTGGTGCACCAGCAGCAGCACCAGCCGCAGCAGCAGCAGCACCAGCCGCAGCAGCAGCAGCACCAGCCGCAGCAGCAGCAGCAGCGGTGGCAGTAATAGTTCCTGATGTCCGACGTGGAGGCGGCTCCAGTGGAGCGGGCACTGTGCCCTCCACACCGAAATCAAGCAAGACATCGGCCC
**************************************************((((..((((((..........))))))((.((.((.((.((.((....)).)).)).)).)).)).(((.((((.((.......)).)))))))(((.........))).....)))).(((((....))))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total V057
head
 M021
embryo
............................................................................................................................................................................................TGCGGGGACAGTGCCCTCCA........................... 20 3 6 0.17 1 1 0
........GACGACGACGACGACGACAGC.............................................................................................................................................................................................................. 21 0 18 0.06 1 0 1

Anti-sense strand reads

TACTGATGCTGCTGCTGCTGCTGCTGTCGTTGGTGGAGTAGGAGTAGGAGCAGCTCACCACGTGGTCGTCGTCGTGGTCGGCGTCGTCGTCGTCGTGGTCGGCGTCGTCGTCGTCGTGGTCGGCGTCGTCGTCGTCGTCGCCACCGTCATTATCAAGGACTACAGGCTGCACCTCCGCCGAGGTCACCTCGCCCGTGACACGGGAGGTGTGGCTTTAGTTCGTTCTGTAGCCGGG
**************************************************((((..((((((..........))))))((.((.((.((.((.((....)).)).)).)).)).)).(((.((((.((.......)).)))))))(((.........))).....)))).(((((....))))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total V042
embryo
 V057
head
......................................................................................................................................................................................................CACCTGTGGTGTGGCTTTAG................. 20 3 20 0.05 1 1 0
..........................TCGTTGGTGGTGTGGTAGTA............................................................................................................................................................................................. 20 3 20 0.05 1 1 0
...................................................................................................................................................................................................TGGCACGGTGGGTGTGGCTTT................... 21 3 20 0.05 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_10:2795812-2796046 + dpe_629 ATG-ACTAC-GACG-------------------------------------------ACGACGACGACGACAGCAACCACCTCATCCTCATC---------------------------------------------------------CTCGTCGAG------TGG------------------------T--------------------------------GCACCAGCAGCAGCACCAG------------C------------------CGCA---GCAGCAGCA------------GCA---------CCAGCCGCAGC------------AGCAG----------------CA------GCACCAGCC------------G------CAGCAGCAGCAGC---AGCGGTGGCAG------------------TAATAGTTCCTGATGTCCGACGTGGAGG----------------------------------------------------CGGCTCCAGTGG-----------A-------------------------------------GCGGGC----------ACTGTGCCCTCCACA------------------------------------------------CCGAAATCAAGCAAG----------------------------ACATC---GGCCC
dp5 4_group4:3759155-3759356 + ATG-ACTAC-GACG-------------------------------------------ACGACGACGACGACAGCAACCACCTCATCCTCATC---------------------------------------------------------CTCGTCGAG------CGG------------------------T--------------------------------GCACC---------------------------------AGCAGC---ACCAGCA---------------------------------GCA----------------------------G------------------------CACCAGCC------------G------CAGCAGCAGCAGC---AGCGGTGGCAG------------------TAATAGTTCCTGATGTCCGACGTGGAGG----------------------------------------------------CGGCTCCAGTGG-----------A-------------------------------------GCGGGC----------ACTGTGCCCTCCACA------------------------------------------------CCGAAATCAAGCAAG----------------------------ACATC---GGCCC
droWil2 scf2_1100000004540:2526918-2527123 - ACC-ACCACCACTA-------------------------------------------GCAACAACAACAGCAACAACAAACCCGCTACTA-------------------------------------ACCAACAGCA------------------------------------------------------------------------------------------GC---AGCAG------------------C---------------AACAACA------GCA---------------------------------ACACCAGAAGCTACAACAGCA-------------------------ACTTAAACAGCAA---------CAGCAGCAGCAGCAACAAAAACAG--GCAGCA----------------G--C------CG-------CCGC-----------------------------------------------------------------------------------------C----------------------------------------------------------------------------GCTGCTGCCGCTGCAGCTGCTGCCAAT----------------------GTGGCAGCCACAATTAAAATCAAGCAG------AATGT---
droVir3 scaffold_13049:9449665-9449888 - ACC-ACTACCA----------------------------------------------ACAACAACAACAACAACAACAAACCCGCTACTA-------------------------------------ACCT---------------------------------------------------------------------------------------------GCAAC---------------------------------AGCAGC---AACAGCA---GCAGAAGCT------------ACA------------------------------GCTACAA-------CTGAAGCAGCAGCA------ACAGGC------------A------CAGCAGCAACATA---AGCAACAGCAG------------------CAACAGGCCTC--------------AGC----------------------------------------------------CAGCGCCAGCAG-----------C-------------------------------------GCAGCC----------GCC--------------------------GCGGCCGCCGCAGCTGCTGCGGCAAAT----------------------GTCGCGGCCACAATTAAGATCAAGCAA------AATGT---
droMoj3 scaffold_6473:14044722-14044946 - GCA-ACAGC-AGCA-------------------------------------------ACAGCAGCAAATGC---------ATCACCACCACC-----------------------------------ACCAGCAGCAGCAGC-------------------------AT--------------------------------------------------------------------------------------CAACAGCATCA---GCA---ACA------------------------ACAGCATCA---GCAACAACAGC------------AGCAG----------------CAACAGCAGCAGCAACAGCAG-----CAG-CAGCAGCAGCAGCAACAAC---AGCAGCAGCA-GCAG--------------CAGCAGTCG-----------------------------------------------------------------------------------------------------------------------------TCGAGGT------CGGCAGCTAGTCC---------GCT--------------GTCGCCTCCGCGT---------------------CCTGGACCGGGCAGCGCGGCGGCCG------------------------------C
droGri2 scaffold_14853:7263250-7263480 - ATG-GCAGC-AGCG--------CAGGCGGCAGCAGCAGCAGCTGCCTATCAAAACCAACAGCAGCAACAGCAGCAGCAGCAACAGCAACAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------C------AGC------A---------ACAACAGCA------------GCA---------GCAACAACAGC------------AGCAA----------------CATCACCAGCAGCAACAGCAA-----CAA-CAGCAGCAGCAACAACAAC---AGCAACAGCA-------------------------------------------GCAG----------------------------------------------------CAGCAACAGCAC-----------A-------------------------------------GCAAGC----------AGAGTAGTTC--GCC--------------CAC------------------------------GCCAAATGTGGGCGTG----------------------------GCAGC----GCCC
droAna3 scaffold_13337:10507799-10508010 - ACC-ACCAACA----------------------------------------------ACAACAACAACAACAGCAACAAATTATCCGCTA-------------------------------------ACCAGCAGCA------------------------------------------------------------------------------------------GC---AACAT------------------C---------------AACAACA------GCAACA------------ACA------------------ACAGAAGCTGCAACAGCAA----CAGCAACAGCAACATCTTAAGCAGCAGCAGCAA---------------------------AAACAGCAGC---A----------------A-----CAGGCAT------CAGC-----------------------------------------------------------------------------------------T----------------------------------------------------------------------------GCTGCTGCCGCTGCAGCCGCTGCCAAT----------------------GTGGCAGCCACCATAAAGATAAAGCAA------AACGT---
droBip1 scf7180000395898:44462-44663 + GCG-GCAGC-AGCA-------------------------------------------GCAGCGGCGGCAGCAACAGCCACAG--------------------------------------------------------------------CGGA----CGAAAGTGA------------------------A--------------------------------CCACC---------------------------------AGCAGCAGCAACAGCA---GCAGCA------------------------------GCAGCATCAG------------TAG-------------GAGCAGCA-CAGCAACATCTGCAG------------------CAGC------------------A-GCAC--CAACAGCAG---C------CACCGTTGCCCATGGCGACAG----------------------------------------------------TGACTCC----------------------------------------------------------------------------------ACTCAGCA------------------------------------------------AC--------ACGGCGACTTCCTTACAG-------AAGACAGC---GGCCC
droKik1 scf7180000302639:2345201-2345425 - ATA-ACAAC-AACG-------------------------------------------ACGACAA---------GGGTTCGACCACTGTCCTG-----------------------------------ACCAATAGCGATAGTAGCAATCCTCTAGAGG------CGC------------------------------------------------CAGCCAAGAGCAGTAGCAGC------------------------------------TCCA---------------------------GCA---------------GCAGCAGCAGC------AGCAG-------------TAGTAGTAGTAGCAATAGCAGCCA------------------CAGT------------------G-GGGG--------------CAACAA-----------------------------------------TTCGG----------------------------------------------------TGGGGA-GCAGCAGCAGGA------------------GCGGGA----------AGCGAGATCTGGAGA------------------------------------------------ACAATATGAACAGGG----------------------------AGATCAA-GCCCC
droFic1 scf7180000454050:456256-456473 - GCA-GCTGC-ACCA-------------------------------------------CGATCCGCAGCAGCAGCATCCGCAGTACCACGCCC-----------------------------------ACCAGC----------------------------------------------------------TGC---ACGCCCACGC-----------------GCTGCCGCACCAGC---------------AGCAGC---AGCA---GCAACAGCA------------------------GCA---------------ACAGCAGCAG----------------------------CAACAACAGCAGCAGCAGCAA------------------------------------------------CAGCAGCA----------------------------------GCTGCACGGC--GGCGATCCCGACGACGAGGAGGTGGAGAACGCCCGCCT----------GGAGCAGGTGCGCC--GC----------------------------------------------------------------------------------------------------------------------------------------------------AAGCAG------AAC-GCCC
droEle1 scf7180000491047:512268-512491 + TCG-TCACA-ATCA-------------------------------------------ACGCCAGCGACAACACCATCCGCACCACCGCCATCG---------------------------------------------------------CAGA----CGACGACGG------------------------C--------------------------------GCAGCAGCAACAGC---------------------------------AACAGCAGCGGCAACAGCA------------GCA----------------------------------------------------CCGACAACTGCAACACCAGCAACAGCA---G------CAGCAGCAACAAC---AACTGCAGCA----------------GCG-----------------------------------------------GCCTG----------------------------------------------------TTGGGC-----------------GCAGTGGGTGTGGC------CATCAGCTGCCCATTGCTCGCCACACAGCA------------------------------------------------ACTAATCGAC-------------------------GA---ACC---GG---
droRho1 scf7180000780277:21911-22144 - AAC-ACCAC-CA---------------------------------------------CCACCAGCAACACCAGCAGCTGCACCACGATC-----------------------------------------CGCAGCAGCAGC-------------------------ACCCGCAGTACCATCCCCACCAGCTGC---ACGGCCACGC-----------------CCTGCCCCACC---------------------------AGCA------------------------------------GCAGCAGCAGCA----------------------------G------------------------CAACAGCA------------G------CAGCAGCAGCAAC---AGCAGCAACAG------CAGCAGCA----------------------------------GCTGCAC-----GGCGATCCCGACGACGAGGAAGTGGAGAACGCCCGCTT----------GGAGCAGGTGCGCC--GC----------------------------------------------------------------------------------------------------------------------------------------------------AAGCAG------AAC-GCCC
droBia1 scf7180000301715:109137-109373 + GTG-GCAGC-AGTC-------------------------------------------ACGGGTCCCCGCACAAGCGCGCCTCCAGCCAGAGC---------------------------------------------------------TTGGAGGAG--------G------------------------A--------------------------------ACATCTGCAGCAGCACAGGGAGCAGCAGCACCAGCAGCAGCA---GCA---GCA------------------------GCAGCAGCAGCA---GCAACACCAGCAG----------------------------CAGCACCCGCAGCAGCAGCAC------------------------------------------------CTCCAGCAG---C---------------AACACCTCCA-TCAGCAGTTCGGC-------------------------------------------------AGC-----------A-------------------------------------ATGGCA----------ACCAGGCGGTCTACA------------------------------------------------CCAATGGCAGTGGCA-----------------------GCAA---G--AT-GGCCC
droTak1 scf7180000414393:168296-168538 - GCA-CCGCC-AATG-------------------------------------------GCTACGGCTACAT--------G-----------------------------------------------------CAGCAACAAGTGCAATCCACGACAAA------CGC------------------------TTC---ACCACAGCACGCTTCCAACAACCA---ACAGC---------------------------------AGCA---GCAACAGCA------------------------GCA---------------GCAGCAGCAGC------ACCAC-------------CAGCAGCAGCAGCAACAGATGCCG------------------CAGC------------------A-GCAC-----------------------CACAA---------------------------------CTCCG----------------------------------------------------TTTTGA-ACGGTCACCCAAACGG--------------GC----TAGCAGGT---CCCTCCGCCCCACACAACAACAACAACA-----------------------------CCA-CCCAA--------------------------------ATG----CCGTC---CTCCC
droEug1 scf7180000409509:735881-736093 + ACC-ATGAC-GACAACAATAAGCAAG--------------------------------------CAGGAGC---ATCAGCAACATCTCC-----------------------------------------AGCAGCAGCAGC-------------------------AG--------------------------------------------------------------------------------------CAGCAGCAGCA---ACA---GCA------------------------ACAACAGCA---ACAGCAACACCAA------------CAG----------------CTACAACAGCAACATGTGCAA-----CAA-CAGCAGCAGCAACAACAA---------------------------------------TT----------------------GCTGATCAGCGG--------------------------------------CAACACCAGCGA-----------TTCGGGA-----------------GCAGTTCCCATCGC------AGCTGACCTCCAGTTCGACA-----------------------------------------------------------------------------------------------------------CC
dm3 chr2R:9478525-9478724 - ACGCACCAC-AAC---------------------------------------------CACCAGAAGCGGCATCACACGCA--------------------------------------------------GCAGCAGCA---------------------------------------------------------------------------------------GC---AACAG------------------C---------------AACAACA------GCAACACACCCAACAGCAGCAGCAGCAGCA---GCAACATCAGCAG----------------------------------------CAG---------------CATCAGCAGCAGCAGCAA---------------------CACCAGAA-----------------------------------------------------------------------------------------------T-----------G-------------------------------------GCGCCC----------TCT--GTTC--------------------GCCGCT-CCTCTGCAGC----GCCGATGTCCACATGGGCATCGATGGCG----------------------------GCATC---GGGCT
droSim2 3r:19809008-19809219 - TCG-TCACA-ATCA-------------------------------------------ACGCCAGCGACAGCACCACCCGCATCATCGCCATCG---------------------------------------------------------CAGA----CGACGACGG------------------------C--------------------------------GCAGC---------------------------------AGCAGC---AACAGCA---------------------------------GCAGCA---GCA-------------------GCAACATCAGCAGCAACAGCAATTGCAACATCAGCAA------------------CTGC------------------A-GCAGCA---------GCG-----------------------------------------------GGCTG----------------------------------------------------TTGGGC-----------------GCAGTGGGCGTGGC------CGGCAGCTGCCCATTGCTCGCCACACAGCA------------------------------------------------ACTAATCGAG-------------------------GA---GCC---GG---
droSec2 scaffold_0:20614298-20614493 - C------------A-------------------------------------------ACGCCAGCGACAACACCACCCGCATCATCGCCATCG---------------------------------------------------------CAGA----CGACGACGG------------------------C--------------------------------GCAGCAGCAGCAGC---------------------------------AGCAGCA----------------------------------------------------------------GCAACATCAGCAGCAACAGCAATTGCAACATCAGCAA------------------CTGC------------------A-GCAGCA---------GCG-----------------------------------------------GGCTG----------------------------------------------------TTGGGC-----------------GCAGTGGGCGTGGC------CGGCAGCTGCCCATTGCTCGCCACACAGCA------------------------------------------------ACTAATCGAG-------------------------GA---GCC---GG---
droYak3 2R:12080921-12081142 + ACA-GTCAACAG-T-------------------------------------------GCAACAGCAACAGCAGCAGCAACTCCATGTGCAGT---------------------------------------------------------CTGCACAAT------TGC------------------------T----------------------GGAG---------GCAGCAGC---------------------------AGCA---GCAACTGCC-------------------------CA------GCA------GCA-------------------------------ACAACAGCA------------------------A------CAGCAGCAGCAGC---AACTGCAGCA----GCA---------GCA------------------------------AAGTGCC-----AGCAATCTGGGCAAACATGGTGGGGTGGCCGCCCTGAA----------GCAGCAACTGCTGC--AAAAGCAGGTC----------------------------------------------------AAT------------------------------------------------CAACTGGCAGCT---------------------------------------GCTGC
droEre2 scaffold_4690:10659320-10659553 + ATG-GGCAT----------------G--------------------------------------CAGCAGC---A-CGGCGGCGATCCC----CAGGGACCGCCCGTTCAGATGCCGCCCTACGGCGCCCAGCAGCAACAGC-------------------------AGCCGCAGCCGCATCCTGGCCTGCCGCCGGGCGC-----------------------CCAACAGCAAT---CTCAG------------C------AGCA---GCAACAGCA---------------------------------GCAGCAACAACAAC------------AACAG----------------CAG-----GCAGCAGCG------------G------CGGCGGCAGCAGC---AG---------------CGGCAGCAG---CCGTAGCA----------------------G--------------------------------------------------------------------------------CCGGCC---------------------------------------------------------------------------------------------------------AACAGCAGG---G----------------------------ACCGC---AGGTC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
ATG-ACTAC-GACG-------------------------------------------ACGACGACGACGACAGCAACCACCTCATCCTCATC---------------------------------------------------------CTCGTCGAG------TGG------------------------T--------------------------------GCACCAGCAGCAGCACCAG------------C------------------CGCA---GCAGCAGCA------------GCA---------CCAGCCGCAGC------------AGCAG----------------CA------GCACCAGCC------------G------CAGCAGCAGCAGC---AGCGGTGGCAG------------------TAATAGTTCCTGATGTCCGACGTGGAGG----------------------------------------------------CGGCTCCAGTGG-----------A-------------------------------------GCGGGC----------ACTGTGCCCTCCACA------------------------------------------------CCGAAATCAAGCAAG----------------------------ACATC---GGCCCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..........GACG-------------------------------------------ACGACGACGACGACAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21180.061100000
dp5
ATG-ACTAC-GACG-------------------------------------------ACGACGACGACGACAGCAACCACCTCATCCTCATC---------------------------------------------------------CTCGTCGAG------CGG------------------------T--------------------------------GCACC---------------------------------AGCAGC---ACCAGCA---------------------------------GCA----------------------------G------------------------CACCAGCC------------G------CAGCAGCAGCAGC---AGCGGTGGCAG------------------TAATAGTTCCTGATGTCCGACGTGGAGG----------------------------------------------------CGGCTCCAGTGG-----------A-------------------------------------GCGGGC----------ACTGTGCCCTCCACA------------------------------------------------CCGAAATCAAGCAAG----------------------------ACATC---GGCCCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....ACTAC-GACG-------------------------------------------ACGACGACGACGACAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000001
.................................................................................................................................................................................................................................................................................CAGCA---------------------------------GCA----------------------------G------------------------CACCAGCC------------G------CAGCAGC..........................................................................................................................................................................................................................................................................................................................2530.3310100000000
...................................................................................................................................................................................................................................................................................GCA---------------------------------GCA----------------------------G------------------------CACCAGCC------------G------CAGCAGC..........................................................................................................................................................................................................................................................................................................................2330.3310100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGC---AGCGGTGGCA.......................................................................................................................................................................................................................................................................................................2290.1110100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAGC---AGCGGT...........................................................................................................................................................................................................................................................................................................19200.0510100000000
............................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAGC---AGCGGTG..........................................................................................................................................................................................................................................................................................................18200.0510100000000
..................................................................................................................................................................................................................................................................................................................................................................................CAGCC------------G------CAGCAGCAGCAGC---AG...............................................................................................................................................................................................................................................................................................................21200.0510000000100
..........................................................................................................................................................................................................................................................................GC---ACCAGCA---------------------------------GCA----------------------------G------------------------CACCA.......................................................................................................................................................................................................................................................................................................................................................18200.0510100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGC---AGCGGT...........................................................................................................................................................................................................................................................................................................18200.0510100000000
droWil2
ACC-ACCACCACTA-------------------------------------------GCAACAACAACAGCAACAACAAACCCGCTACTA-------------------------------------ACCAACAGCA------------------------------------------------------------------------------------------GC---AGCAG------------------C---------------AACAACA------GCA---------------------------------ACACCAGAAGCTACAACAGCA-------------------------ACTTAAACAGCAA---------CAGCAGCAGCAGCAACAAAAACAG--GCAGCA----------------G--C------CG-------CCGC-----------------------------------------------------------------------------------------C----------------------------------------------------------------------------GCTGCTGCCGCTGCAGCTGCTGCCAAT----------------------GTGGCAGCCACAATTAAAATCAAGCAG------AATGT---SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...............................................................................................................................................................................................................................................................................................................................................................................CTTAAACAGCAA---------CAGCAGCAGCA............................................................................................................................................................................................................................................................................................................................2311.00100100
..............................................................................AACCCGCTACTA-------------------------------------ACCAACAGCA------------------------------------------------------------------------------------------........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
...................................................................................................................................................................................................................................GC---AGCAG------------------C---------------AACAACA------GCA---------------------------------ACACC......................................................................................................................................................................................................................................................................................................................................................................................................2340.25100010
..................................................................................................................................AACAGCA------------------------------------------------------------------------------------------GC---AGCAG------------------C---------------AACAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
droVir3
ACC-ACTACCA----------------------------------------------ACAACAACAACAACAACAACAAACCCGCTACTA-------------------------------------ACCT---------------------------------------------------------------------------------------------GCAAC---------------------------------AGCAGC---AACAGCA---GCAGAAGCT------------ACA------------------------------GCTACAA-------CTGAAGCAGCAGCA------ACAGGC------------A------CAGCAGCAACATA---AGCAACAGCAG------------------CAACAGGCCTC--------------AGC----------------------------------------------------CAGCGCCAGCAG-----------C-------------------------------------GCAGCC----------GCC--------------------------GCGGCCGCCGCAGCTGCTGCGGCAAAT----------------------GTCGCGGCCACAATTAAGATCAAGCAA------AATGT---SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...............................................................................................................................................................................................................................................................................................................CA------------------------------GCTACAA-------CTGAAGCAGCAGCA------..........................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
............................................................ACAACAACAACAACAACAAACC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22140.649008000000000000010000000000000000000000000000000000000000000000
..............................................................AACAACAACAACAACAAACC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.255005000000000000000000000000000000000000000000000000000000000000
...........................................................AACAACAACAACAACAACAAACC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23130.233003000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCA------ACAGGC------------A------CAG..............................................................................................................................................................................................................................................................................................................................1950.201001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................C---------------------------------AGCAGC---AACAGCA---GCAGAAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................2250.201000100000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................AGCAGC---AACAGCA---GCAGAAGCT------------T............................................................................................................................................................................................................................................................................................................................................................................................................................2370.141000000000000000000000000001000000000000000000000000000000000000
.............................................................CAACAACAACAACAACAAACC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21180.112002000000000000000000000000000000000000000000000000000000000000
...............................................................ACAACAACAACAACAAACC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.102002000000000000000000000000000000000000000000000000000000000000
.......ACCA----------------------------------------------ACAACAACAACAACAACAACAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27100.101001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................C---------------------------------AGCAGC---AACAGCA---GCAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051001000000000000000000000000000000000000000000000000000000000000
.............................................................CAACAACAACAACAACAAAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000000010000000000000000000000000000000000
droMoj3
GCA-ACAGC-AGCA-------------------------------------------ACAGCAGCAAATGC---------ATCACCACCACC-----------------------------------ACCAGCAGCAGCAGC-------------------------AT--------------------------------------------------------------------------------------CAACAGCATCA---GCA---ACA------------------------ACAGCATCA---GCAACAACAGC------------AGCAG----------------CAACAGCAGCAGCAACAGCAG-----CAG-CAGCAGCAGCAGCAACAAC---AGCAGCAGCA-GCAG--------------CAGCAGTCG-----------------------------------------------------------------------------------------------------------------------------TCGAGGT------CGGCAGCTAGTCC---------GCT--------------GTCGCCTCCGCGT---------------------CCTGGACCGGGCAGCGCGGCGGCCG------------------------------CSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...............................................................................................................................................................................................................................................................................A---ACA------------------------ACAGCATCA---GCAACAACAGC------------..........................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................G--------------CAGCAGTCG-----------------------------------------------------------------------------------------------------------------------------TCGAGGT------CGGCAGC..........................................................................................................................2411.001000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCG-----------------------------------------------------------------------------------------------------------------------------TCGAGGT------CGGCAGCTAGTCC---------GCT--------------..........................................................................................2811.001000001
........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGTCG-----------------------------------------------------------------------------------------------------------------------------TCGAGGT------CGGCAG...........................................................................................................................2111.001100000
.................................................................................................................................................................................................................................................................ACAGCATCA---GCA---ACA------------------------ACAGCATCA---.................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000010
.............................................................................................................................................................................................................................................................................GCA---ACA------------------------ACAGCATCA---GCAAC............................................................................................................................................................................................................................................................................................................................................................................................................2030.331010000
..............................................................................................................................................................................................................................................................................................................ACAGCATCA---GCAACAACAGC------------AGC.......................................................................................................................................................................................................................................................................................................................................................................................2330.331000010
..................................................................................................................................................................................................................................................................................................................CATCA---GCAACAACAGC------------AGCAG----------------CAACA................................................................................................................................................................................................................................................................................................................................................................2630.331100000
...................................................................................................................................................................................................................................................................................................................ATCA---GCAACAACAGC------------AGCAG----------------C....................................................................................................................................................................................................................................................................................................................................................................21200.306600000
....................................................................................................................................................................................................................................................................................................................TCA---GCAACAACAGC------------AGCAG----------------CA...................................................................................................................................................................................................................................................................................................................................................................21200.306600000
.............................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAAC---AGCAGCAGCA-G.....................................................................................................................................................................................................................................................................................................21200.153300000
.....................................................................................................................................................................................................................................................................................................................................................................................................................AC---AGCAGCAGCA-GCAG--------------CAGCA...............................................................................................................................................................................................................................................................................21200.102000020
....................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAGCAACAAC---AGCAGCA..........................................................................................................................................................................................................................................................................................................26200.051000100
.................................................................................................................................................................................................................................................................................................................................................................................................AG-CAGCAGCAGCAGCAACAAC---AGCAGCA..........................................................................................................................................................................................................................................................................................................28200.051010000
..A-ACAGC-AGCA-------------------------------------------ACAGCAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051010000
..A-ACAGC-AGCA-------------------------------------------ACAGCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000010
...................................................................................................................................................................................................................................................................................................................ATCA---GCAACAACAGC------------AGCA......................................................................................................................................................................................................................................................................................................................................................................................19200.051100000
.............................................................................................................................................................................................................................................................................................................................ACAACAGC------------AGCAG----------------CAACAGCAG............................................................................................................................................................................................................................................................................................................................................................22200.051000010
..........................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAACAAC---AGCAGCAGCA-GC....................................................................................................................................................................................................................................................................................................25200.051000010
.....................................................................................................................................................................................................................................................................................................................CA---GCAACAACAGC------------AGCAG----------------CAACAGCA.............................................................................................................................................................................................................................................................................................................................................................26200.051000010
droGri2
ATG-GCAGC-AGCG--------CAGGCGGCAGCAGCAGCAGCTGCCTATCAAAACCAACAGCAGCAACAGCAGCAGCAGCAACAGCAACAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------C------AGC------A---------ACAACAGCA------------GCA---------GCAACAACAGC------------AGCAA----------------CATCACCAGCAGCAACAGCAA-----CAA-CAGCAGCAGCAACAACAAC---AGCAACAGCA-------------------------------------------GCAG----------------------------------------------------CAGCAACAGCAC-----------A-------------------------------------GCAAGC----------AGAGTAGTTC--GCC--------------CAC------------------------------GCCAAATGTGGGCGTG----------------------------GCAGC----GCCCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
............................................................GCAGCAACAGCAGCAGCAGCAACA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.10220
.........................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAACAAC---AGCAACAGCA-------------------------------------------............................................................................................................................................................................................................................................................24200.05110
.........................................................................................................................................................................................................................................................................................ACAACAGCA------------GCA---------GCAACAACAGC------------AGC.......................................................................................................................................................................................................................................................................................................................................................................................26200.05110
................................................................................................................................................................................................................................................................................................................................................................................................CAA-CAGCAGCAGCAACAACA......................................................................................................................................................................................................................................................................................................................20200.05110
droAna3
ACC-ACCAACA----------------------------------------------ACAACAACAACAACAGCAACAAATTATCCGCTA-------------------------------------ACCAGCAGCA------------------------------------------------------------------------------------------GC---AACAT------------------C---------------AACAACA------GCAACA------------ACA------------------ACAGAAGCTGCAACAGCAA----CAGCAACAGCAACATCTTAAGCAGCAGCAGCAA---------------------------AAACAGCAGC---A----------------A-----CAGGCAT------CAGC-----------------------------------------------------------------------------------------T----------------------------------------------------------------------------GCTGCTGCCGCTGCAGCCGCTGCCAAT----------------------GTGGCAGCCACCATAAAGATAAAGCAA------AACGT---SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAA---------------------------AAACAGCAGC---A----------------.......................................................................................................................................................................................................................................................................................2111.001010000
..............................................................................AATTATCCGCTA-------------------------------------ACCAGCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
........................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAGC---A----------------A-----CAGGCAT------C...................................................................................................................................................................................................................................................................1820.501010000
..........................................................................................................................................................................................................................................................................................................................................................................TTAAGCAGCAGCAGCAA---------------------------C....................................................................................................................................................................................................................................................................................................................18200.051010000
..........A----------------------------------------------ACAACAACAACAACAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051010000
.......AACA----------------------------------------------ACAACAACAACAACAGCAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051100000
...............................................................................................................................................................................................................................................................................AACAACA------GCAACA------------ACA------------------AC......................................................................................................................................................................................................................................................................................................................................................................................................18200.051010000
........ACA----------------------------------------------ACAACAACAACAACAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051100000
droBip1
GCG-GCAGC-AGCA-------------------------------------------GCAGCGGCGGCAGCAACAGCCACAG--------------------------------------------------------------------CGGA----CGAAAGTGA------------------------A--------------------------------CCACC---------------------------------AGCAGCAGCAACAGCA---GCAGCA------------------------------GCAGCATCAG------------TAG-------------GAGCAGCA-CAGCAACATCTGCAG------------------CAGC------------------A-GCAC--CAACAGCAG---C------CACCGTTGCCCATGGCGACAG----------------------------------------------------TGACTCC----------------------------------------------------------------------------------ACTCAGCA------------------------------------------------AC--------ACGGCGACTTCCTTACAG-------AAGACAGC---GGCCCSizeHit CountTotal NormTotal
No Reads
droKik1
ATA-ACAAC-AACG-------------------------------------------ACGACAA---------GGGTTCGACCACTGTCCTG-----------------------------------ACCAATAGCGATAGTAGCAATCCTCTAGAGG------CGC------------------------------------------------CAGCCAAGAGCAGTAGCAGC------------------------------------TCCA---------------------------GCA---------------GCAGCAGCAGC------AGCAG-------------TAGTAGTAGTAGCAATAGCAGCCA------------------CAGT------------------G-GGGG--------------CAACAA-----------------------------------------TTCGG----------------------------------------------------TGGGGA-GCAGCAGCAGGA------------------GCGGGA----------AGCGAGATCTGGAGA------------------------------------------------ACAATATGAACAGGG----------------------------AGATCAA-GCCCCSizeHit CountTotal NormTotal
No Reads
droFic1
GCA-GCTGC-ACCA-------------------------------------------CGATCCGCAGCAGCAGCATCCGCAGTACCACGCCC-----------------------------------ACCAGC----------------------------------------------------------TGC---ACGCCCACGC-----------------GCTGCCGCACCAGC---------------AGCAGC---AGCA---GCAACAGCA------------------------GCA---------------ACAGCAGCAG----------------------------CAACAACAGCAGCAGCAGCAA------------------------------------------------CAGCAGCA----------------------------------GCTGCACGGC--GGCGATCCCGACGACGAGGAGGTGGAGAACGCCCGCCT----------GGAGCAGGTGCGCC--GC----------------------------------------------------------------------------------------------------------------------------------------------------AAGCAG------AAC-GCCCSizeHit CountTotal NormTotal
No Reads
droEle1
TCG-TCACA-ATCA-------------------------------------------ACGCCAGCGACAACACCATCCGCACCACCGCCATCG---------------------------------------------------------CAGA----CGACGACGG------------------------C--------------------------------GCAGCAGCAACAGC---------------------------------AACAGCAGCGGCAACAGCA------------GCA----------------------------------------------------CCGACAACTGCAACACCAGCAACAGCA---G------CAGCAGCAACAAC---AACTGCAGCA----------------GCG-----------------------------------------------GCCTG----------------------------------------------------TTGGGC-----------------GCAGTGGGTGTGGC------CATCAGCTGCCCATTGCTCGCCACACAGCA------------------------------------------------ACTAATCGAC-------------------------GA---ACC---GG---SizeHit CountTotal NormTotal
No Reads
droRho1
AAC-ACCAC-CA---------------------------------------------CCACCAGCAACACCAGCAGCTGCACCACGATC-----------------------------------------CGCAGCAGCAGC-------------------------ACCCGCAGTACCATCCCCACCAGCTGC---ACGGCCACGC-----------------CCTGCCCCACC---------------------------AGCA------------------------------------GCAGCAGCAGCA----------------------------G------------------------CAACAGCA------------G------CAGCAGCAGCAAC---AGCAGCAACAG------CAGCAGCA----------------------------------GCTGCAC-----GGCGATCCCGACGACGAGGAAGTGGAGAACGCCCGCTT----------GGAGCAGGTGCGCC--GC----------------------------------------------------------------------------------------------------------------------------------------------------AAGCAG------AAC-GCCCSizeHit CountTotal NormTotal
No Reads
droBia1
GTG-GCAGC-AGTC-------------------------------------------ACGGGTCCCCGCACAAGCGCGCCTCCAGCCAGAGC---------------------------------------------------------TTGGAGGAG--------G------------------------A--------------------------------ACATCTGCAGCAGCACAGGGAGCAGCAGCACCAGCAGCAGCA---GCA---GCA------------------------GCAGCAGCAGCA---GCAACACCAGCAG----------------------------CAGCACCCGCAGCAGCAGCAC------------------------------------------------CTCCAGCAG---C---------------AACACCTCCA-TCAGCAGTTCGGC-------------------------------------------------AGC-----------A-------------------------------------ATGGCA----------ACCAGGCGGTCTACA------------------------------------------------CCAATGGCAGTGGCA-----------------------GCAA---G--AT-GGCCCSizeHit CountTotal NormTotal
No Reads
droTak1
GCA-CCGCC-AATG-------------------------------------------GCTACGGCTACAT--------G-----------------------------------------------------CAGCAACAAGTGCAATCCACGACAAA------CGC------------------------TTC---ACCACAGCACGCTTCCAACAACCA---ACAGC---------------------------------AGCA---GCAACAGCA------------------------GCA---------------GCAGCAGCAGC------ACCAC-------------CAGCAGCAGCAGCAACAGATGCCG------------------CAGC------------------A-GCAC-----------------------CACAA---------------------------------CTCCG----------------------------------------------------TTTTGA-ACGGTCACCCAAACGG--------------GC----TAGCAGGT---CCCTCCGCCCCACACAACAACAACAACA-----------------------------CCA-CCCAA--------------------------------ATG----CCGTC---CTCCCSizeHit CountTotal NormTotal
No Reads
droEug1
ACC-ATGAC-GACAACAATAAGCAAG--------------------------------------CAGGAGC---ATCAGCAACATCTCC-----------------------------------------AGCAGCAGCAGC-------------------------AG--------------------------------------------------------------------------------------CAGCAGCAGCA---ACA---GCA------------------------ACAACAGCA---ACAGCAACACCAA------------CAG----------------CTACAACAGCAACATGTGCAA-----CAA-CAGCAGCAGCAACAACAA---------------------------------------TT----------------------GCTGATCAGCGG--------------------------------------CAACACCAGCGA-----------TTCGGGA-----------------GCAGTTCCCATCGC------AGCTGACCTCCAGTTCGACA-----------------------------------------------------------------------------------------------------------CCSizeHit CountTotal NormTotal
No Reads
dm3
ACGCACCAC-AAC---------------------------------------------CACCAGAAGCGGCATCACACGCA--------------------------------------------------GCAGCAGCA---------------------------------------------------------------------------------------GC---AACAG------------------C---------------AACAACA------GCAACACACCCAACAGCAGCAGCAGCAGCA---GCAACATCAGCAG----------------------------------------CAG---------------CATCAGCAGCAGCAGCAA---------------------CACCAGAA-----------------------------------------------------------------------------------------------T-----------G-------------------------------------GCGCCC----------TCT--GTTC--------------------GCCGCT-CCTCTGCAGC----GCCGATGTCCACATGGGCATCGATGGCG----------------------------GCATC---GGGCTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGCAGC----GCCGATGTCCACATGGGC...................................................2617.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-CCTCTGCAGC----GCCGATGTCCACATGGGA...................................................2914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACATGGGCATCGATGGCG----------------------------GC...........2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAGCAA---------------------CACCAGAA-----------------------------------------------------------------------------------------------T-----------G-------------------------------------GCGC...................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCACATGGGCATCGATGGCG----------------------------GCA..........2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCT-CCTCTGCAGC----GCCGAT...............................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......AC-AAC---------------------------------------------CACCAGAAGCGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACATGGGCATCGATGGCG----------------------------GCAT.........2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000
.................................................................................................................................................................................................................................................................................................................................................................................................................AGCAA---------------------CACCAGAA-----------------------------------------------------------------------------------------------T-----------G-------------------------------------GCGC...................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--GTTC--------------------GCCGCT-CCTCTGCAGC----GCCG.................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...CACCAC-AAC---------------------------------------------CACCAGAAGCGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAA---------------------CACCAGAA-----------------------------------------------------------------------------------------------T-----------G-------------------------------------GCGCCC----------.......................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................CCAGAAGCGGCATCACACGCA--------------------------------------------------GCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....CCAC-AAC---------------------------------------------CACCAGAAGCGGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACATGGGCATCGATGGCG----------------------------GCATC---G....2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000001000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGCAGC----GCCGATGTCCACATGGGC...................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGCATCGATGGCG----------------------------GCATC---GGGCT2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................GCAA---------------------CACCAGAA-----------------------------------------------------------------------------------------------T-----------G-------------------------------------GCGCCC----------TCT--GTTC--------------------T.........................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCTGCAGC----GCCGATGTC............................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGGGCATCGATGGCG----------------------------GCATC---.....2211.0010000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................CACCAGAA-----------------------------------------------------------------------------------------------T-----------G-------------------------------------GCGCCC----------TCT--GTT...............................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................CA------GCAACACACCCAACAGCAGCAGCAG......................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................ACACCCAACAGCAGCAGCAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGCATCGATGGCG----------------------------GCA..........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCT-CCTCTGCAGC----GCCGATGTCC...........................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................GCAA---------------------CACCAGAA-----------------------------------------------------------------------------------------------T-----------G-------------------------------------GCGCCC----------TCT--GTTC--------------------G.........................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................CACACCCAACAGCAGCAGC........................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGCAGC----GCCGATGTCCACATGG.....................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................CACCAGAA-----------------------------------------------------------------------------------------------T-----------G-------------------------------------GCGCCC----------TCT--GTTC--------------------GCCGC.....................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................AACACACCCAACAGCAGCAGC........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........C-AAC---------------------------------------------CACCAGAAGCGGCATCACACGCA--------------------------------------------------........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCGATGGCG----------------------------GCATC---GGGC.2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...................................................................................................................................................................................................................................................................................ACA------GCAACACACCCAACAGCAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGATGGCG----------------------------GCATC---GGGT.1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CT-CCTCTGCAGC----GCCGATGTCCAC.........................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCCACATGGGCATCGATGGCG----------------------------.............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--GTTC--------------------GCCGCT-CCTCTGCAGT----.....................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGCATCGATGGCG----------------------------GCATC---GG...2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACATGGGCATCGATGGCG----------------------------GCATC---.....2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGGGCATCGATGGCG----------------------------GCAT.........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
..................................................................................................................................................................................................................................................................................AACA------GCAACACACCCAACAGCAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................................................................ACACACCCAACAGCAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
..GCACCAC-AAC---------------------------------------------CACCAGAAGCGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATGGGCATCGATGGCG----------------------------GC...........2011.0010000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................AGAAGCGGCATCACACGCA--------------------------------------------------GC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACATGGGCATCGATGGCG----------------------------GCATC---GGG..2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..........................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAA---------------------CACCAGA.........................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCT--GTTC--------------------GCCGCT-CCTCTGCAGC----GCC..................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAA---------------------CACCAGAA-----------------------------------------------------------------------------------------------T-----------G-------------------------------------GCG....................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCCACATGGGCATCGATGGCG----------------------------GC...........2511.0010000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATGGGCATCGATGGCG----------------------------GCATC---.....2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAA---------------------CACCAGAA-----------------------------------------------------------------------------------------------T-----------G-------------------------------------GCGC...................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAA---------------------CACCAGAA-----------------------------------------------------------------------------------------------T-----------G-------------------------------------GCGCC..................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCACATGGGCATCGAT.............................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................CAACA------GCAACACACCCAACAGCAG............................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................A-----------------------------------------------------------------------------------------------T-----------G-------------------------------------GCGCCC----------TCT--GTTC--------------------GCCGCT-CC.................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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..................................................................................................................................................................................................................................................................................................................................................................................................................GCAA---------------------CACCAGAA-----------------------------------------------------------------------------------------------T-----------G-------------------------------------GCGCCC----------TCT--GTTC--------------------C.........................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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droSim2
TCG-TCACA-ATCA-------------------------------------------ACGCCAGCGACAGCACCACCCGCATCATCGCCATCG---------------------------------------------------------CAGA----CGACGACGG------------------------C--------------------------------GCAGC---------------------------------AGCAGC---AACAGCA---------------------------------GCAGCA---GCA-------------------GCAACATCAGCAGCAACAGCAATTGCAACATCAGCAA------------------CTGC------------------A-GCAGCA---------GCG-----------------------------------------------GGCTG----------------------------------------------------TTGGGC-----------------GCAGTGGGCGTGGC------CGGCAGCTGCCCATTGCTCGCCACACAGCA------------------------------------------------ACTAATCGAG-------------------------GA---GCC---GG---SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....CACA-ATCA-------------------------------------------ACGCCAGCGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
...............................................................................................................................................................GACGACGG------------------------C--------------------------------GCAGC---------------------------------AGCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.50100010000000000000
...............................................................................................................................................................................................................................................................................AACAGCA---------------------------------GCAGCA---GCA-------------------GCAACATC.............................................................................................................................................................................................................................................................................................................................................................................24150.07100000000001000000
.........................................................................................................................................................................................................................................................................................................................................................ACATCAGCAGCAACAGC.................................................................................................................................................................................................................................................................................................................................................................17200.05100000000001000000
droSec2
C------------A-------------------------------------------ACGCCAGCGACAACACCACCCGCATCATCGCCATCG---------------------------------------------------------CAGA----CGACGACGG------------------------C--------------------------------GCAGCAGCAGCAGC---------------------------------AGCAGCA----------------------------------------------------------------GCAACATCAGCAGCAACAGCAATTGCAACATCAGCAA------------------CTGC------------------A-GCAGCA---------GCG-----------------------------------------------GGCTG----------------------------------------------------TTGGGC-----------------GCAGTGGGCGTGGC------CGGCAGCTGCCCATTGCTCGCCACACAGCA------------------------------------------------ACTAATCGAG-------------------------GA---GCC---GG---SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..............................................................................................................................................................CGACGACGG------------------------C--------------------------------GCAGCAGCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010100
..............................................................................................................................................................CGACGACGG------------------------C--------------------------------GCAGCAGCAGCAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.5011000
...................................................................................................................................................................................................................................................................................GCA----------------------------------------------------------------GCAACATCAGCAGCAAC....................................................................................................................................................................................................................................................................................................................................................................20130.0810010
droYak3
ACA-GTCAACAG-T-------------------------------------------GCAACAGCAACAGCAGCAGCAACTCCATGTGCAGT---------------------------------------------------------CTGCACAAT------TGC------------------------T----------------------GGAG---------GCAGCAGC---------------------------AGCA---GCAACTGCC-------------------------CA------GCA------GCA-------------------------------ACAACAGCA------------------------A------CAGCAGCAGCAGC---AACTGCAGCA----GCA---------GCA------------------------------AAGTGCC-----AGCAATCTGGGCAAACATGGTGGGGTGGCCGCCCTGAA----------GCAGCAACTGCTGC--AAAAGCAGGTC----------------------------------------------------AAT------------------------------------------------CAACTGGCAGCT---------------------------------------GCTGCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................CA------------------------A------CAGCAGCAGCAGC---AACTGCAGCA----GC.................................................................................................................................................................................................................................................................................................2851.60800000000008
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-----AGCAATCTGGGCAAACATGGTG....................................................................................................................................................................................................................2311.00101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA------------------------------AAGTGCC-----AGCAATCTGGGC..............................................................................................................................................................................................................................2211.00100100000000
....................................................................................................................................................................................................................................................................................................................................................................AACAGCA------------------------A------CAGCAGCAGCAGC---AACT.............................................................................................................................................................................................................................................................................................................2550.20101000000000
........................................................................................................................................................................................................................................................................................................................................................................GCA------------------------A------CAGCAGCAGCAGC---AACTGCAGCA----...................................................................................................................................................................................................................................................................................................2760.17101000000000
.......................................................................................................................................................................................................................................................................................................................................................................AGCA------------------------A------CAGCAGCAGCAGC---AACT.............................................................................................................................................................................................................................................................................................................22150.07101000000000
........................................................................................................................................................................................................................................................................................................................................................................GCA------------------------A------CAGCAGCAGCAGC---AACT.............................................................................................................................................................................................................................................................................................................21190.05101000000000
................................................................................................................................................................................................................................................................................................................................GCA-------------------------------ACAACAGCA------------------------A------CAGCAGC..........................................................................................................................................................................................................................................................................................................................20200.05101000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGC---AACTGCAGCA----GCA---------GC.....................................................................................................................................................................................................................................................................................21200.05100010000000
.................................................................................................................................................................................................................................................................................................................................CA-------------------------------ACAACAGCA------------------------A------CAGC.............................................................................................................................................................................................................................................................................................................................16200.05100000000001
...........................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGC---AACTGCAGCA----GCA---------.......................................................................................................................................................................................................................................................................................25200.05101000000000
.....................................................................................................................................................................................................................................................................................................................................................................ACAGCA------------------------A------CAGCAGCAGCAGC---AAC..............................................................................................................................................................................................................................................................................................................23200.05100000100000
..........................................................CAACAGCAACAGCAGCAGCAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000000000
droEre2
ATG-GGCAT----------------G--------------------------------------CAGCAGC---A-CGGCGGCGATCCC----CAGGGACCGCCCGTTCAGATGCCGCCCTACGGCGCCCAGCAGCAACAGC-------------------------AGCCGCAGCCGCATCCTGGCCTGCCGCCGGGCGC-----------------------CCAACAGCAAT---CTCAG------------C------AGCA---GCAACAGCA---------------------------------GCAGCAACAACAAC------------AACAG----------------CAG-----GCAGCAGCG------------G------CGGCGGCAGCAGC---AG---------------CGGCAGCAG---CCGTAGCA----------------------G--------------------------------------------------------------------------------CCGGCC---------------------------------------------------------------------------------------------------------AACAGCAGG---G----------------------------ACCGC---AGGTCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......................................................................................................................................CAACAGC-------------------------AGCCGCAGCCGCAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
............................................................................CGGCGGCGATCCC----CAGGGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000
.....................................................................................................................................AGCAACAGC-------------------------AGCCGCAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1890.1110000010
.....................................................................................................................................................................................................................................................................................................................................................................................CG------------G------CGGCGGCAGCAGC---AG---------------CGA.............................................................................................................................................................................................................................................................................................21100.1011000000
...................................................................................................................................................................................................................................................................................................................................................................................AGCG------------G------CGGCGGCAGCAGC---AG---------------C...............................................................................................................................................................................................................................................................................................21110.0910000010
.................................................................................................................................................................................................................................................................................CAGCA---------------------------------GCAGCAACAACAAC------------AACAG----------------C....................................................................................................................................................................................................................................................................................................................................................................25110.0910000010
....................................................................................................................................................................................................................................................................................................................................................................................GCG------------G------CGGCGGCAGCAG.....................................................................................................................................................................................................................................................................................................................16200.0510000001

Generated: 06/08/2015 at 02:56 PM