ID:

dpe_558

 Coordinate:

scaffold_1:4547092-4547242 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-2.5 -2.3 -2.1

Flybase annnotation

CDS [Dper\GL18778-cds]; exon [dper_GLEANR_20917:1]; intron [Dper\GL18778-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AGCCCAATGAGCGCGGTGATACTGATTGCCTACCTGAAGTCTGCCACCAAGTAAGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCCTCTACTTTCAATCACCTCACCACCCCAACAACAGGATGTATTATTGTGTTCAGTCACAATCCCAACAGCAACACCAACAATATGAACAGC
**************************************************(((((((.....................................................................................................)))).)))...................................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M021
embryo
 M042
female body
 V111
male body		 V042
embryo
 V057
head
.............................................................................................................................................................................................CAACAGGATGTATTATTGT........................................... 19 0 1 16.00 16 15 0 1 0 0
..............................TACCTGAAGTCTGCCACC........................................................................................................................................................................................................... 18 0 1 5.00 5 4 1 0 0 0
..........................TGCCTACCTGAAGTCTGCCACC........................................................................................................................................................................................................... 22 0 1 5.00 5 5 0 0 0 0
.GCCCAATGAGCGCGGTGATCTG.................................................................................................................................................................................................................................... 22 3 1 4.00 4 0 0 4 0 0
................................................................................................................................................................CTCTACTTTCAATCACCTCACC..................................................................... 22 0 1 4.00 4 3 0 0 1 0
....................................................................................................................................................................................................ATGTATTATTGTGTTCAGT.................................... 19 0 1 3.00 3 2 0 0 1 0
................................................................................................................................................................................................CAGGATGTATTATTGTGTTC....................................... 20 0 1 3.00 3 3 0 0 0 0
..........................................................................................................................................................................................CAACAACAGGATGTATTATTGT........................................... 22 0 1 3.00 3 3 0 0 0 0
.....................CTGATTGCCTACCTGAAGTCTGCCACC........................................................................................................................................................................................................... 27 0 1 3.00 3 3 0 0 0 0
.................................................................................................................................................................................................AGGATGTATTATTGTGTTCAGTC................................... 23 0 1 3.00 3 3 0 0 0 0
..............................................................................................................................................................................................AACAGGATGTATTATTGT........................................... 18 0 1 3.00 3 2 0 0 1 0
..CCCAATGAGCGCGGTGATC...................................................................................................................................................................................................................................... 19 1 1 2.00 2 0 0 2 0 0
......................................................................................................................................................................TTTCAATCACCTCACCACCCC................................................................ 21 0 1 2.00 2 0 2 0 0 0
..................GATCTGATTGCCTACCTGAAGTCTGCC.............................................................................................................................................................................................................. 27 3 1 2.00 2 2 0 0 0 0
...............................................................................................................................................................................................ACAGGATGTATTATTGTGTT........................................ 20 0 1 2.00 2 0 1 1 0 0
..................................................................................................................................................................................................GGATGTATTATTGTGTTCAGTCA.................................. 23 0 1 2.00 2 0 0 2 0 0
AGCCCAATGAGCGCGGTGATCTG.................................................................................................................................................................................................................................... 23 3 1 2.00 2 2 0 0 0 0
..................................................................................................................................................................CTACTTTCAATCACCTCACCACCCC................................................................ 25 0 1 2.00 2 2 0 0 0 0
..............................TACCTGAAGTCTGCCACCA.......................................................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0
..........................................................................................................................................................................................CAACAACAGGATGTATTAT.............................................. 19 0 1 1.00 1 1 0 0 0 0
........................ATTGCCTACCTGAAGTCTGC............................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0
........................ATTGCCTACCTGAAGTCTGCC.............................................................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0
..............................................................................................................................................................................................AACAGGATGTATTATTGTGTT........................................ 21 0 1 1.00 1 0 0 1 0 0
..........................................................................................................................................................................................CAACAACAGGATGTATTATTG............................................ 21 0 1 1.00 1 0 0 1 0 0
....................TCTGATTGCCTACCTGAAGT................................................................................................................................................................................................................... 20 1 1 1.00 1 1 0 0 0 0
..............................................................................................................................................................................................AACAGGATGTATTATTGTGTTC....................................... 22 0 1 1.00 1 0 1 0 0 0
....................................................................................................................................................................ACTTTCAATCACCTCACCACC.................................................................. 21 0 1 1.00 1 0 1 0 0 0
..................................................................................................................................................................................CACCACCCCAACAACAGGAT..................................................... 20 0 1 1.00 1 0 0 0 1 0
...............................ACCTGAAGTCTGCCACCA.......................................................................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0
....................................................................................................................................................................................................................................GCAACACCCACAATATGAACA.. 21 1 1 1.00 1 0 1 0 0 0
.......................GATTGCCTACCTGAAGTCTGCCACCAAGT....................................................................................................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0
.....................................................................................................................................................................................CACCCCAACAACAGGATG.................................................... 18 0 1 1.00 1 1 0 0 0 0
.................................CTGAAGTCTGCCACCAAGC....................................................................................................................................................................................................... 19 1 1 1.00 1 1 0 0 0 0
..........................TGCCTACCTGAAGTCTGCCA............................................................................................................................................................................................................. 20 0 1 1.00 1 0 0 1 0 0
.............................................................................................................................................................................................CAACAGGATGTATTATTGC........................................... 19 1 1 1.00 1 1 0 0 0 0
......................................................................................................................................................................................................................................AACACCAACAATATGAACAGC 21 0 1 1.00 1 0 0 0 1 0
......................................................................................................................................................................................................GAATTATTGTGTTCAGTCAC................................. 20 1 1 1.00 1 0 1 0 0 0
...................ATCTGATTGCCTACCTGAAGTCTGCCAC............................................................................................................................................................................................................ 28 2 1 1.00 1 1 0 0 0 0
.GCCCAATGAGCGCGGTGATCT..................................................................................................................................................................................................................................... 21 2 1 1.00 1 0 0 1 0 0
.................................................................................................................................................................................................AGGATGTATTATTGTGTTCAG..................................... 21 0 1 1.00 1 0 1 0 0 0
......................TGATTGCCTACCTGAAGTCTGCCACC........................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0
........................ATTGCCTACCTGAAGTCTGCCACCA.......................................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0
...............................................................................................................................................................................................................................CAACAGCAACACCAACAATAT....... 21 0 1 1.00 1 0 1 0 0 0
..............................................................................................................................................................GCCTCTACTTTCAATCACCT......................................................................... 20 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................................CAACAGGATGTACTATTGT........................................... 19 1 1 1.00 1 1 0 0 0 0
............................................................................................................................................................................................ACAACAGGATGTATTATT............................................. 18 0 1 1.00 1 1 0 0 0 0
.................................CTGAAGTCTGCCACCAAGG....................................................................................................................................................................................................... 19 1 1 1.00 1 1 0 0 0 0
..................................TGAAGTCTGCCACCAAGTAA..................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0
....................TCTGATTGCCTACCTGAAGTC.................................................................................................................................................................................................................. 21 1 1 1.00 1 0 0 1 0 0
..............................................................................................................................................................GCCTCTACTTTCAATCACCC......................................................................... 20 1 1 1.00 1 1 0 0 0 0
............................CCTACCTGAAGTCTGCCACC........................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
.....................................................................................................................................................................................................................................CAACACCAACAATATGAACAGC 22 0 1 1.00 1 1 0 0 0 0
..........................TGCCTACCGGAAGTCTGCCACC........................................................................................................................................................................................................... 22 1 1 1.00 1 0 1 0 0 0
................................CCTGAAGTCTGCCACCAAGT....................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0
...........................GCCTACCTGAAGTCTGCCACCAAGT....................................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0
..........................TGCCTACCTGAAGTCTGCCACCAAGT....................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 1 0
..............................................................................................................................................................................................AACAGGATGTATTATTGG........................................... 18 1 1 1.00 1 1 0 0 0 0
.GCCCGATGAGCGCGGTGATC...................................................................................................................................................................................................................................... 20 2 1 1.00 1 0 0 1 0 0
..................GATCTGATTGCCTACCTGAAGT................................................................................................................................................................................................................... 22 3 1 1.00 1 1 0 0 0 0
........................................................................................................................................................................................................ATTATTGTGTTCAGTCAC................................. 18 0 1 1.00 1 0 0 0 1 0
................................................................................................................................................................CTCTACTTTCAATCACCTCAC...................................................................... 21 0 1 1.00 1 0 0 0 1 0
...................ATCTGATTGCCTACCTGAAGTCTGCCACC........................................................................................................................................................................................................... 29 2 1 1.00 1 1 0 0 0 0
..................................TGAAGTCTGCCACCAAGT....................................................................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0
...................ATCTGATTGCCTACCTGAAGT................................................................................................................................................................................................................... 21 2 1 1.00 1 1 0 0 0 0
......................................................................................................................................................................................ACCCCAACAACAGGATGTA.................................................. 19 0 1 1.00 1 0 1 0 0 0
.............................................................................................................................................................................................CAACAGGATGTATTATTGTG.......................................... 20 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................................CAACAGGATGTAGTATTGTG.......................................... 20 1 1 1.00 1 1 0 0 0 0
................................................................................................................................................................................................CAGGATGTATTATTGTGTTCAGG.................................... 23 1 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................................CAACAGGATGTATTATTGTGTTCAGT.................................... 26 0 1 1.00 1 1 0 0 0 0
.......................GATTGCCTACCTGAAGTCTGCCA............................................................................................................................................................................................................. 23 0 1 1.00 1 0 0 0 1 0
.....................CTGATTGCCTACCTGAAGTCTGCC.............................................................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................AGCCTCTACTTTCAATCACCTCACC..................................................................... 25 0 1 1.00 1 1 0 0 0 0
..................................................................................................................................................................................................GGATGTATTATTGTGTTCA...................................... 19 0 1 1.00 1 0 1 0 0 0
............................................................................................................................................................................................................................ATCCAACAGCAACACCAACAATAT....... 24 2 1 1.00 1 0 0 0 1 0
................................CCTGAAGTCTGCCACCAAGTAA..................................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0
.................................................................................................................................................................................................AGGATGTATTATTGTGTTCAGTCACA................................ 26 0 1 1.00 1 0 0 0 1 0
................................................................................................................................................................................................CAGGATGTATTATTGTGT......................................... 18 0 1 1.00 1 0 0 0 1 0
......................................................................................................................................................................................................................................AACACCAACAATATGAAAAGA 21 2 2 0.50 1 0 0 0 1 0
...CCAATGAGCGCGGTGATCT..................................................................................................................................................................................................................................... 19 2 3 0.33 1 0 0 1 0 0
...........................................................................................................................................................................................CAGAACAGGATGTGTTATTGT........................................... 21 3 5 0.20 1 0 0 0 0 1
..................GATCTGATTGCCTACCTGAAG.................................................................................................................................................................................................................... 21 3 8 0.13 1 0 1 0 0 0

Anti-sense strand reads

TCGGGTTACTCGCGCCACTATGACTAACGGATGGACTTCAGACGGTGGTTCATTCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGGAGATGAAAGTTAGTGGAGTGGTGGGGTTGTTGTCCTACATAATAACACAAGTCAGTGTTAGGGTTGTCGTTGTGGTTGTTATACTTGTCG
**************************************************(((((((.....................................................................................................)))).)))...................................************************************************** 		Read size # Mismatch Hit Count Total Norm Total V111
male body		 V057
head
..............................................................................................................................................................CGGAGGTGAAAGTTAGTGG.......................................................................... 19 1 1 2.00 2 2 0
...............................................................................................................................................................GGAGATGGAAGTTAGTGGAGT....................................................................... 21 1 1 1.00 1 1 0
............................................................................................................................................................................AGTGGAGTGGTGGGGTTGTT........................................................... 20 0 1 1.00 1 1 0
................................................................................................................................................................................................................................TTGTCGTTGTGGTTGTTATAC...... 21 0 1 1.00 1 1 0
..........................................................................................................................................................................TTACTGGAGTGGTGGGATGG............................................................. 20 3 4 0.25 1 0 1
.................................................................................................................................................................................................................AAGTCAGTGTTAGGGTTCG....................... 19 2 4 0.25 1 1 0
..............................................................................................................................................................................................................................GGTTGTCGTTGTGGTTGTT.......... 19 0 5 0.20 1 1 0
.........................................................................................................................................................................GTTAGGGGAGTGATGGGCTTG............................................................. 21 3 5 0.20 1 0 1
........................................................................................................................................................................AGTTAGTGGAGTAGTCGG................................................................. 18 2 14 0.07 1 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_1:4547042-4547292 - dpe_558 AGCCCAATGAGCGCGGTGATACTGATTGCCTACCTGAAGTCTGCCACCAAGTAAGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCCTCTACTTTCAATC-----ACCTCACC---ACCCCAACAACAGGAT--------GTATTA----TTGTGTTCAGTCACAATCCCAACAGCAACACCAA---CAATAT-GAACAGC
dp5 4_group3:3060340-3060432 - AGCCTC-------------------------------------------------------------------------------------------------------------------------------------------------------------TACTTTCAATC-----ACCTCACC---ACCCCAACAACAGGAT--------GTATTA----TTGTGTTCAGTCACAATCCAACA-GCAACACCAA---CAATAT-GAACAGC
droWil2 scf2_1100000004521:1787829-1787911 - ACAACTACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAACAGGAACT---ATTGTATTATTAATTGTGTTTAGTCACAATCCAAAA-ACAACATCAAATATAATAT-ATACAAA
droVir3 scaffold_12963:6534336-6534390 + AGCCCAATGAGCGTGGTGAT-CTGATCGCTTACCTGAAATCGGCTACCAAGTAAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6500:25688707-25688761 + AGCCCAATGAGCGCGGTGAT-CTGATTGCCTATCTGAAGGCGGCTACTAAGTAAGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15252:9751102-9751154 + AGCCCAACGAGCGTGGTGAT-CTGATTGCCTACCTCAAGTCGGCTACCAAGTAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_12943:3940664-3940718 - AGCCCAACGAGCGCGGTGAT-CTGATCGCTTACCTGAAATCTGCCACCAAGTAAGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000395973:158143-158197 - AGCCCAACGAGCGCGGTGAC-CTGATCGCTTACCTGAAGTCTGCCACCAAGTAAGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302643:781536-781590 - AGCCCAATGAGCGTGGCGAT-CTGATTGCCTACCTGAAGTCCGCCACCAAGTAAGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000454078:646582-646670 + C---------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTCCATCCAATAAACTCACC---A--ACCATTGCAGGATGTCTAA-TGTATTA----TTGTGTTCAGTCACAGTCCGGCAAACAACCGCAA---CA--------CAGC
droEle1 scf7180000490579:622608-622701 - TG-------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCTATC-----AACTTACC---A--ACCACTGCAGGATGTCTTACTGTATTA----TTGTGTTCAGTCACAGTCCGGCAAACAACCGCAA---CAGCAG-AAACAAC
droRho1 scf7180000768553:37614-37707 + TG-------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCCATC-----AACTCACC---A--ACCACTGCAGGATGTCTAACTGTATTA----TTGTGTTCAGTCACAGTCCGGCAAACAATCGCAG---CAGCAG-AAACAAC
droBia1 scf7180000301468:886844-886898 + AGCCCAACGAGCGCGGCGAC-CTGATCGCCTACCTGAAGTCGGCCACCAAGTAAGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000415914:449348-449438 + AC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATC-----AACTCACCAACA--ACCTCTGCAGGATGTCCAACTGTATTA----TTGTGTTCAGTCACAGTCCGGCAAACAACCGCAA---CAGCAG-CAACAAC
droEug1 scf7180000408961:297136-297233 + TG-------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCCATC-----AACTCGCCCAAA--ACCACTGCAGGATGTCTAACTGTATTA----TTGTGTTCAGTCACAGTCCGGCAAAAAACCGCAA---CAGCAGCAAACAAC
dm3 chr2L:16722380-16722467 + TG-------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCCATC-----AACTTACCCACA--ACCACTGCAGGATGTCAAACTGTATTA----TTGTGTTCAGTCACAGTCCGGCACGCAAATGCAG---CA----------GC
droSim2 2l:16288942-16289029 + TG-------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCCATC-----AACTCACCCACA--ACCACTGCAGGATGTAAAACTGTATTA----TTGTGTTCAGTCACAGTCCGGCAAGCAAATGCAG---CA----------GC
droSec2 scaffold_7:369031-369112 + TG-------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCCATC-----AACTCACCCACA--ACCACTGCAGGATGTCAAACTGTATTA----TTGTGTTCAGTCACAGTCCGGCAAGCAAATGC-------------------
droYak3 2R:4380480-4380561 - TG-------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCCATC-----AACTCACCCACA--ACCACTGCAGGATGTCAAACTGTATTA----TTGTGTTCAGTCACAGTCCGGCAAGCAACCGC-------------------
droEre2 scaffold_4845:19793813-19793865 + AGCCCAACGAGCGCGGCGAT-CTGATCGCCTACCTGAAGTCGGCCACCAAGTAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
AGCCCAATGAGCGCGGTGATACTGATTGCCTACCTGAAGTCTGCCACCAAGTAAGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCCTCTACTTTCAATC-----ACCTCACC---ACCCCAACAACAGGAT--------GTATTA----TTGTGTTCAGTCACAATCCCAACAGCAACACCAA---CAATAT-GAACAGCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.....................................................................................................................................................................................................CAACAGGAT--------GTATTA----TTGT...............................................19116.00161500001
..............................TACCTGAAGTCTGCCACC...................................................................................................................................................................................................................................1815.005410000
..........................TGCCTACCTGAAGTCTGCCACC...................................................................................................................................................................................................................................2215.005500000
.GCCCAATGAGCGCGGTGATCTG............................................................................................................................................................................................................................................................2214.004000004
................................................................................................................................................................CTCTACTTTCAATC-----ACCTCACC---.....................................................................................2214.004301000
............................................................................................................................................................................................................AT--------GTATTA----TTGTGTTCAGT........................................1913.003201000
........................................................................................................................................................................................................CAGGAT--------GTATTA----TTGTGTTC...........................................2013.003300000
..................................................................................................................................................................................................CAACAACAGGAT--------GTATTA----TTGT...............................................2213.003300000
.....................CTGATTGCCTACCTGAAGTCTGCCACC...................................................................................................................................................................................................................................2713.003300000
.........................................................................................................................................................................................................AGGAT--------GTATTA----TTGTGTTCAGTC.......................................2313.003300000
......................................................................................................................................................................................................AACAGGAT--------GTATTA----TTGT...............................................1813.003201000
..CCCAATGAGCGCGGTGATC..............................................................................................................................................................................................................................................................1912.002000002
......................................................................................................................................................................TTTCAATC-----ACCTCACC---ACCCC................................................................................2112.002020000
.......................................................................................................................................................................................................ACAGGAT--------GTATTA----TTGTGTT............................................2012.002010001
..........................................................................................................................................................................................................GGAT--------GTATTA----TTGTGTTCAGTCA......................................2312.002000002
AGCCCAATGAGCGCGGTGATCTG............................................................................................................................................................................................................................................................2312.002200000
..................................................................................................................................................................CTACTTTCAATC-----ACCTCACC---ACCCC................................................................................2512.002200000
..............................TACCTGAAGTCTGCCACCA..................................................................................................................................................................................................................................1911.001010000
..................................................................................................................................................................................................CAACAACAGGAT--------GTATTA----T..................................................1911.001100000
........................ATTGCCTACCTGAAGTCTGC.......................................................................................................................................................................................................................................2011.001010000
........................ATTGCCTACCTGAAGTCTGCC......................................................................................................................................................................................................................................2111.001010000
......................................................................................................................................................................................................AACAGGAT--------GTATTA----TTGTGTT............................................2111.001000001
..................................................................................................................................................................................................CAACAACAGGAT--------GTATTA----TTG................................................2111.001000001
......................................................................................................................................................................................................AACAGGAT--------GTATTA----TTGTGTTC...........................................2211.001010000
....................................................................................................................................................................ACTTTCAATC-----ACCTCACC---ACC..................................................................................2111.001010000
.......................................................................................................................................................................................CACC---ACCCCAACAACAGGAT--------.............................................................2011.001001000
...............................ACCTGAAGTCTGCCACCA..................................................................................................................................................................................................................................1811.001010000
.......................GATTGCCTACCTGAAGTCTGCCACCAAGT...............................................................................................................................................................................................................................2911.001100000
..........................................................................................................................................................................................C---ACCCCAACAACAGGAT--------G............................................................1811.001100000
.................................CTGAAGTCTGCCACCAAGC...............................................................................................................................................................................................................................1911.001100000
..........................TGCCTACCTGAAGTCTGCCA.....................................................................................................................................................................................................................................2011.001000001
.....................................................................................................................................................................................................CAACAGGAT--------GTATTA----TTGC...............................................1911.001100000
..........................................................................................................................................................................................................................................................AACACCAA---CAATAT-GAACAGC2111.001001000
.GCCCAATGAGCGCGGTGATCT.............................................................................................................................................................................................................................................................2111.001000001
.........................................................................................................................................................................................................AGGAT--------GTATTA----TTGTGTTCAG.........................................2111.001010000
......................TGATTGCCTACCTGAAGTCTGCCACC...................................................................................................................................................................................................................................2611.001010000
........................ATTGCCTACCTGAAGTCTGCCACCA..................................................................................................................................................................................................................................2511.001010000
...................................................................................................................................................................................................................................................CAACAGCAACACCAA---CAATAT-.......2111.001010000
..............................................................................................................................................................GCCTCTACTTTCAATC-----ACCT............................................................................................2011.001100000
....................................................................................................................................................................................................ACAACAGGAT--------GTATTA----TT.................................................1811.001100000
.................................CTGAAGTCTGCCACCAAGG...............................................................................................................................................................................................................................1911.001100000
..................................TGAAGTCTGCCACCAAGTAA.............................................................................................................................................................................................................................2011.001010000
..............................................................................................................................................................GCCTCTACTTTCAATC-----ACCC............................................................................................2011.001100000
............................CCTACCTGAAGTCTGCCACC...................................................................................................................................................................................................................................2011.001100000
.........................................................................................................................................................................................................................................................CAACACCAA---CAATAT-GAACAGC2211.001100000
................................CCTGAAGTCTGCCACCAAGT...............................................................................................................................................................................................................................2011.001000001
...........................GCCTACCTGAAGTCTGCCACCAAGT...............................................................................................................................................................................................................................2511.001010000
..........................TGCCTACCTGAAGTCTGCCACCAAGT...............................................................................................................................................................................................................................2611.001001000
......................................................................................................................................................................................................AACAGGAT--------GTATTA----TTGG...............................................1811.001100000
........................................................................................................................................................................................................................ATTA----TTGTGTTCAGTCAC.....................................1811.001001000
................................................................................................................................................................CTCTACTTTCAATC-----ACCTCAC.........................................................................................2111.001001000
..................................TGAAGTCTGCCACCAAGT...............................................................................................................................................................................................................................1811.001010000
..............................................................................................................................................................................................ACCCCAACAACAGGAT--------GTA..........................................................1911.001010000
.....................................................................................................................................................................................................CAACAGGAT--------GTATTA----TTGTG..............................................2011.001100000
........................................................................................................................................................................................................CAGGAT--------GTATTA----TTGTGTTCAGG........................................2311.001100000
.....................................................................................................................................................................................................CAACAGGAT--------GTATTA----TTGTGTTCAGT........................................2611.001100000
.......................GATTGCCTACCTGAAGTCTGCCA.....................................................................................................................................................................................................................................2311.001001000
.....................CTGATTGCCTACCTGAAGTCTGCC......................................................................................................................................................................................................................................2411.001100000
.............................................................................................................................................................AGCCTCTACTTTCAATC-----ACCTCACC---.....................................................................................2511.001100000
..........................................................................................................................................................................................................GGAT--------GTATTA----TTGTGTTCA..........................................1911.001010000
................................CCTGAAGTCTGCCACCAAGTAA.............................................................................................................................................................................................................................2211.001010000
.........................................................................................................................................................................................................AGGAT--------GTATTA----TTGTGTTCAGTCACA....................................2611.001001000
........................................................................................................................................................................................................CAGGAT--------GTATTA----TTGTGT.............................................1811.001001000
...CCAATGAGCGCGGTGATCT.............................................................................................................................................................................................................................................................1930.331000001
dp5
AGCCTC-------------------------------------------------------------------------------------------------------------------------------------------------------------TACTTTCAATC-----ACCTCACC---ACCCCAACAACAGGAT--------GTATTA----TTGTGTTCAGTCACAATCCAACA-GCAACACCAA---CAATAT-GAACAGCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....................................................................................................................................................................................................................................GTTCAGTCACAATCCAACA-G..........................2014.0040300100000
...................................................................................................................................................................................................................................................AACA-GCAACACCAA---CAATAT-GAAC...2413.0030300000000
.......................................................................................................................................................................................................ACAGGAT--------GTATTA----TTGTGTTCAGTCACA....................................2813.0030100002000
..............................................................................................................................................................................................................................................AATCCAACA-GCAACACCAA---CAATAT-GA.....2712.0020110000000
.........................................................................................................................................................................CAATC-----ACCTCACC---ACCCCAAC.............................................................................2112.0020002000000
..............................................................................................................................................................................................................................................AATCCAACA-GCAACACCAA---CAATAT-G......2612.0020011000000
.....................................................................................................................................................................................................................................................CA-GCAACACCAA---CAATAT-GAAC...2212.0020011000000
....................................................................................................................................................................................................ACAACAGGAT--------GTATTA----TTGT...............................................2012.0020100001000
......................................................................................................................................................................................................................GTATTA----TTGTGTTCAGTCA......................................1912.0020010100000
........................................................................................................................................................................................................CAGGAT--------GTATTA----TTGTGTTCAGTCACA....................................2712.0020010001000
.....................................................................................................................................................................CTTTCAATC-----ACCTCACC---ACCC.................................................................................2112.0020002000000
....................................................................................................................................................................................................ACAACAGGAT--------GTATTA----TTGTGTTCA..........................................2512.0020000020000
......................................................................................................................................................................TTTCAATC-----ACCTCACC---ACCC.................................................................................2012.0020101000000
......................................................................................................................................................................TTTCAATC-----ACCTCACC---ACCCCA...............................................................................2212.0020100010000
......................................................................................................................................................................TTTCAATC-----ACCTCACC---ACCCCAAC.............................................................................2411.0010001000000
...CTC-------------------------------------------------------------------------------------------------------------------------------------------------------------TACTTTCAATC-----ACCTCA..........................................................................................2011.0010100000000
........................................................................................................................................................................................ACC---ACCCCAACAACAGGAT--------GTA..........................................................2211.0010001000000
..........................................................................................................................................................................AATC-----ACCTCACC---ACCCCAACAA...........................................................................2211.0010100000000
........................................................................................................................................................................................................................................AGTCACAATCCAACA-GCAACAC....................2211.0010001000000
AGCCTC-------------------------------------------------------------------------------------------------------------------------------------------------------------TACTTTCAATC-----ACCTC...........................................................................................2211.0010010000000
........................................................................................................................................................................................................CAGGAT--------GTATTA----TTGTGTTCAGT........................................2311.0010000001000
.........................................................................................................................................................................................................AGGAT--------GTATTA----TTGTGTTCA..........................................2011.0010000000010
.......................................................................................................................................................................................................ACAGGAT--------GTATTA----TTGTGTTC...........................................2111.0011000000000
...............................................................................................................................................................................................................................................ATCCAACA-GCAACACCAA---CAATAT-GAAC...2811.0010010000000
........................................................................................................................................................................TCAATC-----ACCTCACC---ACCCC................................................................................1911.0010001000000
.......................................................................................................................................................................................................................................CAGTCACAATCCAACA-GCAACAC....................2311.0010100000000
..........................................................................................................................................................................................................GGAT--------GTATTA----TTGTGTTCAGTCACAATCC................................2911.0010001000000
..............................................................................................................................................................................................................................................AATCCAACA-GCAACACCAA---C.............2011.0010010000000
...................................................................................................................................................................................................................................................AACA-GCAACACCAA---CAATAT-GAACA..2511.0010100000000
.............................................................................................................................................................................................................T--------GTATTA----TTGTGTTCAGTCAC.....................................2111.0010010000000
........................................................................................................................................................................TCAATC-----ACCTCACC---ACCCCA...............................................................................2011.0010100000000
.......................................................................................................................................................................................................................................CAGTCACAATCCAACA-GCAAC......................2111.0010000001000
.....................................................................................................................................................................................................................................................CA-GCAACACCAA---CAATAT-GAACAGC2511.0010010000000
...............................................................................................................................................................................................................................................ATCCAACA-GCAACACCAA---C.............1911.0010000100000
.........................................................................................................................................................................CAATC-----ACCTCACC---ACCCCAACAA...........................................................................2311.0010001000000
....................................................................................................................................................................................................................................GTTCAGTCACAATCCAACA-GCA........................2211.0010010000000
..................................................................................................................................................................................................CAACAACAGGAT--------GTATTA----TTGTG..............................................2311.0010100000000
..........................................................................................................................................................................................................GGAT--------GTATTA----TTGTGTTCAGTCACAATC.................................2811.0010100000000
...................................................................................................................................................................................................AACAACAGGAT--------GTATTA----TTGC...............................................2111.0010010000000
....................................................................................................................................................................................................................................GTTCAGTCACAATCCAACA-...........................1911.0010000100000
.GCCTC-------------------------------------------------------------------------------------------------------------------------------------------------------------TACTTTCAATC-----ACCT............................................................................................2011.0010100000000
....................................................................................................................................................................................................................................GTTCAGTCACAATCCAACA-GCAACAC....................2611.0010010000000
.....................................................................................................................................................................................................CAACAGGAT--------GTATTA----TTGTGTTCAGT........................................2611.0010010000000
...................................................................................................................................................................................................................................................AACA-GCAACACCAA---CAATAT-GA.....2211.0010100000000
...........................................................................................................................................................................................................................................CACAATCCAACA-GCAACACCAA---C.............2311.0010100000000
............................................................................................................................................................................TC-----ACCTCACC---ACCCCAACAACAGGA......................................................................2511.0010100000000
.........................................................................................................................................................................................CC---ACCCCAACAACAGGAT--------GTA..........................................................2111.0010100000000
........................................................................................................................................................................................................................................................GCAACACCAA---CAATAT-GAAC...2011.0010001000000
........................................................................................................................................................................................ACC---ACCCCAACAACAGGAT--------GTAT.........................................................2311.0010100000000
.GCCTC-------------------------------------------------------------------------------------------------------------------------------------------------------------TACTTTCAATC-----ACCTCACC---A....................................................................................2511.0010100000000
............................................................................................................................................................................TC-----ACCTCACC---ACCCCAACAACAG........................................................................2311.0010100000000
........................................................................................................................................................................................................................ATTA----TTGTGTTCAGTCACA....................................1911.0010100000000
..............................................................................................................................................................................................ACCCCAACAACAGGAT--------GTATTA----TTGTGT.............................................2811.0010100000000
...................................................................................................................................................................................................................................................AACA-GCAACACCAA---CAATAT-GAACAG.2611.0010100000000
..................................................................................................................................................................................................................................GTGTTCAGTCACAATCCAAC.............................2011.0010010000000
..............................................................................................................................................................................................................................................AATCCAACA-GCAACACCAA---CA............2111.0010010000000
....................................................................................................................................................................................................ACAACAGGAT--------GTATTA----TTG................................................1911.0010100000000
...CTC-------------------------------------------------------------------------------------------------------------------------------------------------------------TACTTTCAATC-----ACCTCACC---ACCC.................................................................................2611.0010100000000
..................................................................................................................................................................................................................................................CAACA-GCAACACCAA---CAATAT-GAACAGC2811.0010000100000
......................................................................................................................................................................................................AACAGGAT--------GTATTA----TTGT...............................................1811.0010000100000
...............................................................................................................................................................................................................................................ATCCAACA-GCAACACCAA---CAATAT-GA.....2611.0010010000000
....................................................................................................................................................................ACTTTCAATC-----ACCTCACC---ACCC.................................................................................2211.0010001000000
..................................................................................................................................................................................................................................................CAACA-GCAACACCAA---CAATAT-.......2111.0010100000000
.......................................................................................................................................................................................................................................CAGTCACAATCCAACA-GCAACACCA..................2511.0010100000000
......................................................................................................................................................................................................................................TCAGTCACAATCCAACA-GCAAC......................2211.0010001000000
...................................................................................................................................................................................................AACAACAGGAT--------GTATTA----TTG................................................2011.0010000001000
........................................................................................................................................................................................................................ATTA----TTGTGTTCAGTCACAATCCAACA-...........................2711.0010010000000
......................................................................................................................................................................................................................................................A-GCAACACCAA---CAATAT-GAAC...2111.0010100000000
....................................................................................................................................................................ACTTTCAATC-----ACCTCACC---ACCCCAACA............................................................................2711.0010001000000
..........................................................................................................................................................................................C---ACCCCAACAACAGGAT--------GT...........................................................1911.0010000100000
....................................................................................................................................................................................................................................GTTCAGTCACAATCCAACA-GCAACA.....................2511.0010100000000
AGCCTC-------------------------------------------------------------------------------------------------------------------------------------------------------------TACTTTCAATC-----ACCTCAC.........................................................................................2411.0010010000000
..............................................................................................................................................................................................ACCCCAACAACAGGAT--------GTA..........................................................1911.0010100000000
.............................................................................................................................................................................................................................................CAATCCAACA-GCAACACCAA---CAAT..........2411.0010100000000
..............................................................................................................................................................................................................................................AATCCAACA-GCAACACCAA---CAATAT-.......2511.0010010000000
.......................................................................................................................................................................................CACC---ACCCCAACAACAGGAT--------GT...........................................................2211.0010000001000
.........................................................................................................................................................................................................................................................CAACACCAA---CAATAT-GAAC...1911.0010010000000
.....................................................................................................................................................................................................................................................CA-GCAACACCAA---CAATAT-GAA....2111.0010100000000
....................................................................................................................................................................................................................................GTTCAGTCACAATCCAACA-GC.........................2111.0010010000000
.........................................................................................................................................................................................................................................GTCACAATCCAACA-GCAACACC...................2211.0010010000000
..........................................................................................................................................................................................................GGAT--------GTATTA----TTGTGTTCAGT........................................2111.0010100000000
.......................................................................................................................................................................................................................TATTA----TTGTGTTCAGTCACA....................................2011.0010100000000
.......................................................................................................................................................................................CACC---ACCCCAACAACAGGAT--------.............................................................2011.0010010000000
....TC-------------------------------------------------------------------------------------------------------------------------------------------------------------TACTTTCAATC-----ACCTCACC---ACCCCAAC.............................................................................2911.0010001000000
...............................................................................................................................................................................................................................................ATCCAACA-GCAACACCAA---CA............2011.0010100000000
.........................................................................................................................................................................CAATC-----ACCTCACC---ACCCC................................................................................1811.0010100000000
.........................................................................................................................................................................CAATC-----ACCTCACC---ACCCCA...............................................................................1911.0010001000000
.......................................................................................................................................................................TTCAATC-----ACCTCACC---ACCCCAACA............................................................................2411.0010001000000
.....................................................................................................................................................................................................CAACAGGAT--------GTATTA----TTGTGTTCA..........................................2411.0010000100000
...................................................................................................................................................................................................AACAACAGGAT--------GTATTA----TTGT...............................................2111.0010100000000
.GCCTC-------------------------------------------------------------------------------------------------------------------------------------------------------------TACTTTCAATC-----ACCTC...........................................................................................2111.0010100000000
.............................................................................................................................................................................C-----ACCTCACC---ACCCCAACAACAGGAT--------GTA..........................................................2811.0010100000000
..........................................................................................................................................................................AATC-----ACCTCACC---ACCCCAACAACAGG.......................................................................2611.0010100000000
AGCCTC-------------------------------------------------------------------------------------------------------------------------------------------------------------TACTTTCAATC-----ACCT............................................................................................2111.0010100000000
.................................................................................................................................................................................................................................TGTGTTCAGTCACAATCCAACA-...........................2211.0010100000000
........................................................................................................................................................................................ACC---ACCCCAACAACAGGAT--------GTATT........................................................2411.0010000001000
...........................................................................................................................................................................................................................................CACAATCCAACA-GCAACAC....................1911.0010100000000
............................................................................................................................................................................................................AT--------GTATTA----TTGTGTTCAGT........................................1911.0010000010000
.................................................................................................................................................................................................................................................CCAACA-GCAACACCAA---CAAT..........2011.0010100000000
....................................................................................................................................................................ACTTTCAATC-----ACCTCACC---ACC..................................................................................2111.0010100000000
...................................................................................................................................................................TACTTTCAATC-----ACCTCACC---ACCCC................................................................................2411.0010001000000
....................................................................................................................................................................................................................................................ACA-GCAACACCAA---CAATAT-GAACA..2411.0010100000000
droWil2
ACAACTACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAACAGGAACT---ATTGTATTATTAATTGTGTTTAGTCACAATCCAAAA-ACAACATCAAATATAATAT-ATACAAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....CTACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAACAGGAACT---ATTGT...........................................................22111.001100281
......................................................................................................................................................................................................AACAGGAACT---ATTGTATTATTAATTGT...............................................2718.00800080
.CAACTACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAACAGGAACT---ATTGT...........................................................2517.00700070
..AACTACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAACAGGAACT---ATTGT...........................................................2416.00600060
......................................................................................................................................................................................................AACAGGAACT---ATTGTATTATT.....................................................2115.00500050
.....TACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAACAGGAACT---ATTGT...........................................................2114.00400040
......ACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAACAGGAACT---ATTGT...........................................................2014.00400040
...........................................................................................................................................................................................................GAACT---ATTGTATTATTAATTGT...............................................2213.00300030
............................................................................................................................................................................................................AACT---ATTGTATTATTAATTGT...............................................2113.00300030
...........................................................................................................................................................................................................................ATTAATTGTGTTTAGTCACA....................................2013.00300030
........................................................................................................................................................................................................CAGGAACT---ATTGTATTATTAATTGT...............................................2513.00300030
........................................................................................................................................................................................................................ATTATTAATTGTGTTTAGT........................................1913.00300030
...ACTACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAACAGGAACT---ATTGT...........................................................2313.00300030
..........................................................................................................................................................................................................................TATTAATTGTGTTTAGTCACA....................................2112.00200020
..............................................................................................................................................................................................................CT---ATTGTATTATTAATTGTGTT............................................2212.00200020
.........................................................................................................................................................................................................AGGAACT---ATTGTATTATTAATTGT...............................................2412.00200020
.......CA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAACAGGAACT---ATTGT...........................................................1912.00200020
.............................................................................................................................................................................................................ACT---ATTGTATTATTAATTGT...............................................2012.00200020
..............................................................................................................................................................................................................CT---ATTGTATTATTAATTGT...............................................1912.00200020
......................................................................................................................................................................................................AACAGGAACT---ATTGTATTATTAATT.................................................2512.00200020
........................................................................................................................................................................................................................ATTATTAATTGTGTTTAGTC.......................................2012.00200020
.............................................................................................................................................................................................................ACT---ATTGTATTATTAATTGTGT.............................................2212.00200020
....................................................................................................................................................................................................ACAACAGGAACT---ATTGTATTATT.....................................................2312.00200020
.......................................................................................................................................................................................................ACAGGAACT---ATTGTATTATTAATTGT...............................................2612.00200020
........A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAACAGGAACT---ATTGT...........................................................1812.00200020
......ACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAACAGGAACT---ATTGTATT........................................................2312.00202000
..AACTACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAACAGGAACT---................................................................1912.00200020
.....................................................................................................................................................................................................CAACAGGAACT---ATTGTATTATT.....................................................2212.00200020
......................................................................................................................................................................................................................GTATTATTAATTGTGTTTAGTC.......................................2212.00200020
.......CA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAACAGGAACT---ATTGTA..........................................................2012.00200020
....CTACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAACAGGAACT---ATT.............................................................2012.00200020
......................................................................................................................................................................................................AACAGGAACT---ATTGTATTATTAAT..................................................2412.00200020
......................................................................................................................................................................................................AACAGGAACT---ATTGTATT........................................................1812.00200020
...ACTACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAACAGGAACT---................................................................1811.00110000
............................................................................................................................................................................................................................TTAATTGTGTTTAGTCACA....................................1911.00100010
..........................................................................................................................................................................................................................................TCACAATCCAAAA-ACAACATCAAA................2411.00100010
.............................................................................................................................................................................................................................TAATTGTGTTTAGTCACA....................................1811.00100010
....CTACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAACAGGAACT---ATTG............................................................2111.00100010
...................................................................................................................................................................................................................ATTGTATTATTAATTGTGTTTAGT........................................2411.00100010
...............................................................................................................................................................................................................T---ATTGTATTATTAATTGTGTTTAGT........................................2511.00100010
............................................................................................................................................................................................................................................ACAATCCAAAA-ACAACATCAAA................2211.00100010
...........................................................................................................................................................................................................................ATTAATTGTGTTTAGTCA......................................1821.00200020
.........................................................................................................................................................................................................AGGAACT---ATTGTATTATTAATTGTGT.............................................2611.00100010
ACAACTACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAACAGGAACT---ATTG............................................................2511.00101000
.CAACTACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAACAGGAAC....................................................................1911.00100010
..AACTACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAACAGGAACT---AT..............................................................2111.00100010
.............................................................................................................................................................................................................................................CAATCCAAAA-ACAACATCAAATATAAT..........2711.00101000
.........................................................................................................................................................................................................................................GTCACAATCCAAAA-ACAACATCA..................2311.00100010
...............................................................................................................................................................................................................T---ATTGTATTATTAATTGTGT.............................................2011.00100010
......ACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAACAGGAACT---ATTG............................................................1911.00100010
..AACTACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAACAGGAACT---ATT.............................................................2211.00100010
.......................................................................................................................................................................................................................................TAGTCACAATCCAAAA-ACAAC......................2111.00100010
.....................................................................................................................................................................................................CAACAGGAACT---ATTGTATT........................................................1911.00100010
......................................................................................................................................................................................................................................TTAGTCACAATCCAAAA-ACAAC......................2211.00100010
.....................................................................................................................................................................................................................TGTATTATTAATTGTGTTTAGTCAC.....................................2511.00101000
......ACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAACAGGAACT---ATTGTAT.........................................................2211.00100010
.......CA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAACAGGAACT---ATTGTATT........................................................2211.00100010
............................................................................................................................................................................................................................................ACAATCCAAAA-ACAACATC...................1911.00100010
.....................................................................................................................................................................................................CAACAGGAACT---ATTGTAT.........................................................1811.00100010
.CAACTACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAACAGGAACT---ATTGTATT........................................................2811.00101000
........................................................................................................................................................................................................................ATTATTAATTGTGTTTAGTCA......................................2111.00100010
.......................................................................................................................................................................................................ACAGGAACT---ATTGTATTATT.....................................................2011.00101000
.......CA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAACAGGAACT---ATTGTATTA.......................................................2311.00100010
.....................................................................................................................................................................................................CAACAGGAACT---ATTGTATTATTAAT..................................................2511.00100010
...................................................................................................................................................................................................................ATTGTATTATTAATTGTGT.............................................1911.00100010
.....TACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAACAGGAACT---ATTG............................................................2011.00100001
....................................................................................................................................................................................................................................GTTTAGTCACAATCCAAAA-...........................1911.00100010
...........................................................................................................................................................................................................GAACT---ATTGTATTATTAATT.................................................2011.00100010
........A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAACAGGAACT---ATTGTA..........................................................1911.00100010
......................................................................................................................................................................................................AACAGGAACT---ATTGTATTATTAATTG................................................2611.00100010
......................................................................................................................................................................................................................................TTAGTCACAATCCAAAA-ACAACAT....................2411.00100010
........................................................................................................................................................................................................CAGGAACT---ATTGTATTATTA....................................................2011.00100010
.........................................................................................................................................................................................................AGGAACT---ATTGTATTATT.....................................................1811.00100010
..........................................................................................................................................................................................................................TATTAATTGTGTTTAGTC.......................................1820.50100010
droVir3
AGCCCAATGAGCGTGGTGAT-CTGATCGCTTACCTGAAATCGGCTACCAAGTAAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....AATGAGCGTGGTGAT-CTGATCGCT.....................................................................................................................................................................................................................................................2415.005001000000000000002010000000000000000000000000000000000000000100
......ATGAGCGTGGTGAT-CTGATCGCT.....................................................................................................................................................................................................................................................2315.005002000000100000002000000000000000000000000000000000000000000000
......ATGAGCGTGGTGAT-CTGAT.........................................................................................................................................................................................................................................................1914.004001000000000000000100010000000000000000000000000000000000000100
..........GCGTGGTGAT-CTGATCGCT.....................................................................................................................................................................................................................................................1913.003002000000000000000000000000000000000000000000000000000000000100
.........AGCGTGGTGAT-CTGATCGCTTACC.................................................................................................................................................................................................................................................2413.003102000000000000000000000000000000000000000000000000000000000000
............GTGGTGAT-CTGATCGCTTACC.................................................................................................................................................................................................................................................2113.003002000000000000000000000000000000000000000000000000000000000100
.......TGAGCGTGGTGAT-CTGAT.........................................................................................................................................................................................................................................................1813.003000000000000000002100000000000000000000000000000000000000000000
.................GAT-CTGATCGCTTACCTGAAATC..........................................................................................................................................................................................................................................2313.003001100000000000001000000000000000000000000000000000000000000000
.........AGCGTGGTGAT-CTGATCGCT.....................................................................................................................................................................................................................................................2013.003001000000000000002000000000000000000000000000000000000000000000
.....AATGAGCGTGGTGAT-CTGAT.........................................................................................................................................................................................................................................................2013.003001000000000000000100000000000000000010000000000000000000000000
......ATGAGCGTGGTGAT-CTGATCGCTTACC.................................................................................................................................................................................................................................................2713.003000000000000000000120000000000000000000000000000000000000000000
.GCCCAATGAGCGTGGTGAT-CTGATCG.......................................................................................................................................................................................................................................................2613.003000000000000000000000010000000200000000000000000000000000000000
.......TGAGCGTGGTGAT-CTGATCGCT.....................................................................................................................................................................................................................................................2212.002000000010000000001000000000000000000000000000000000000000000000
.GCCCAATGAGCGTGGTGAT-CTG...........................................................................................................................................................................................................................................................2212.002000000000000000001000000000001000000000000000000000000000000000
...CCAATGAGCGTGGTGAT-CT............................................................................................................................................................................................................................................................1912.002000000000000000000002000000000000000000000000000000000000000000
.GCCCAATGAGCGTGGTGAT-CT............................................................................................................................................................................................................................................................2112.002000000000000000001000100000000000000000000000000000000000000000
.....AATGAGCGTGGTGAT-CTGATCGC......................................................................................................................................................................................................................................................2312.002000000000000000002000000000000000000000000000000000000000000000
...........................GCTTACCTGAAATCGGCTACCA..................................................................................................................................................................................................................................2212.002002000000000000000000000000000000000000000000000000000000000000
..............................TACCTGAAATCGGCTACC...................................................................................................................................................................................................................................1812.002010000000000000000000000000000000000000000000000000000000100000
.................GAT-CTGATCGCTTACCTGAAAT...........................................................................................................................................................................................................................................2212.002000000000000000011000000000000000000000000000000000000000000000
.....................CTGATCGCTTACCTGAAATCG.........................................................................................................................................................................................................................................2112.002000000200000000000000000000000000000000000000000000000000000000
....CAATGAGCGTGGTGAT-CTGATCGC......................................................................................................................................................................................................................................................2412.002000200000000000000000000000000000000000000000000000000000000000
.................GAT-CTGATCGCTTACCTGAA.............................................................................................................................................................................................................................................2012.002000000000000000001000000000000000000000000000000000000000001000
..................AT-CTGATCGCTTACCTGAAATC..........................................................................................................................................................................................................................................2212.002000100000000000100000000000000000000000000000000000000000000000
...............................ACCTGAAATCGGCTACCAAGT...............................................................................................................................................................................................................................2112.002000000000000000000000000000001000000000000000000000000000000010
AGCCCAATGAGCGTGGTGAT-CTGAT.........................................................................................................................................................................................................................................................2512.002000000000000000010000000000000000000000000000000000000000000010
.............................TTACCTGAAATCGGCTACCAAGT...............................................................................................................................................................................................................................2311.001000000000000000001000000000000000000000000000000000000000000000
......ATGAGCGTGGTGAT-CTGATCGCTTACCTGAAATCGGCTACC...................................................................................................................................................................................................................................4111.001000000000000000000000000000000000000000000000000000000000100000
AGCCCAATGAGCGTGGTGAT-CTGATCG.......................................................................................................................................................................................................................................................2711.001000000000000000001000000000000000000000000000000000000000000000
.........AGCGTGGTGAT-CTGATCGCTTACCT................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
.............................TTACCTGAAATCGGCTACCA..................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
..........................CGCTTACCTGAAATCGGCTAC....................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
......................TGATCGCTTACCTGAAATCGGCTA.....................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.........................TCGCTTACCTGAAATCGGCTA.....................................................................................................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
...................T-CTGATCGCTTACCTGAAAT...........................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
........GAGCGTGGTGAT-CTGATCGC......................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
..................................TGAAATCGGCTACCAAGTA..............................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
............................CTTACCTGAAATCGGCTACCAAGTAAA............................................................................................................................................................................................................................2711.001000000000000000000000010000000000000000000000000000000000000000
.........AGCGTGGTGAT-CTGATCG.......................................................................................................................................................................................................................................................1811.001000000000000000001000000000000000000000000000000000000000000000
..............GGTGAT-CTGATCGCTTACC.................................................................................................................................................................................................................................................1911.001000000000000000000100000000000000000000000000000000000000000000
..............................TACCTGAAATCGGCTACCA..................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000100
...CCAATGAGCGTGGTGAT-CTGAT.........................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
..............GGTGAT-CTGATCGCTTACCTGAA.............................................................................................................................................................................................................................................2311.001000000000000001000000000000000000000000000000000000000000000000
........GAGCGTGGTGAT-CTGATCGCT.....................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
........GAGCGTGGTGAT-CTGATCG.......................................................................................................................................................................................................................................................1911.001000100000000000000000000000000000000000000000000000000000000000
...................T-CTGATCGCTTACCTGAAATCGGCTACC...................................................................................................................................................................................................................................2811.001000000000000000000100000000000000000000000000000000000000000000
......ATGAGCGTGGTGAT-CTGATCGC......................................................................................................................................................................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
AGCCCAATGAGCGTGGTGAT-..............................................................................................................................................................................................................................................................2011.001000000000000000000100000000000000000000000000000000000000000000
...........CGTGGTGAT-CTGATCGCTT....................................................................................................................................................................................................................................................1911.001000000000100000000000000000000000000000000000000000000000000000
.............TGGTGAT-CTGATCGCTTACCTGAAAT...........................................................................................................................................................................................................................................2611.001000000000000000000000010000000000000000000000000000000000000000
..........................CGCTTACCTGAAATCGGCTACC...................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
...............................ACCTGAAATCGGCTACCAAGTA..............................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
..............................TACCTGAAATCGGCTACCAAGT...............................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
........................ATCGCTTACCTGAAATCGGCTACC...................................................................................................................................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
...........CGTGGTGAT-CTGATCGCT.....................................................................................................................................................................................................................................................1811.001000000000000000001000000000000000000000000000000000000000000000
..CCCAATGAGCGTGGTGAT-CTGATCG.......................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
.........................TCGCTTACCTGAAATCGGC.......................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
..............................TACCTGAAATCGGCTACCAAGTAAA............................................................................................................................................................................................................................2511.001000000000000000000010000000000000000000000000000000000000000000
................TGAT-CTGATCGCTTACCTGAAATCGGC.......................................................................................................................................................................................................................................2711.001000000000000000000000000000010000000000000000000000000000000000
.....AATGAGCGTGGTGAT-CTGA..........................................................................................................................................................................................................................................................1911.001000000000000000000100000000000000000000000000000000000000000000
.......................GATCGCTTACCTGAAATCGGCTACC...................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
.......................GATCGCTTACCTGAAATCG.........................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.......TGAGCGTGGTGAT-CTGATCGCTTAC..................................................................................................................................................................................................................................................2511.001000000000000000000100000000000000000000000000000000000000000000
.......................GATCGCTTACCTGAAATCGGC.......................................................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
.................GAT-CTGATCGCTTACCTGAAATCGGCT......................................................................................................................................................................................................................................2711.001010000000000000000000000000000000000000000000000000000000000000
..................................TGAAATCGGCTACCAAGTAAA............................................................................................................................................................................................................................2111.001000000000000000000000000000000000001000000000000000000000000000
.GCCCAATGAGCGTGGTGAT-CTGATCGCT.....................................................................................................................................................................................................................................................2811.001000000000000000010000000000000000000000000000000000000000000000
.................GAT-CTGATCGCTTACCTG...............................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000010000000000000000000000000
...........................GCTTACCTGAAATCGGCTACCAAGTAA.............................................................................................................................................................................................................................2711.001000000000000000000000010000000000000000000000000000000000000000
.............................TTACCTGAAATCGGCTACC...................................................................................................................................................................................................................................1911.001000100000000000000000000000000000000000000000000000000000000000
......ATGAGCGTGGTGAT-CTGATC........................................................................................................................................................................................................................................................2011.001000000000000000010000000000000000000000000000000000000000000000
........................ATCGCTTACCTGAAATCGGCTACCA..................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
............................CTTACCTGAAATCGGCTACC...................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000100
.......TGAGCGTGGTGAT-CTGATCGCTTACCTG...............................................................................................................................................................................................................................................2811.001000000000000000000100000000000000000000000000000000000000000000
...................T-CTGATCGCTTACCTGAAATC..........................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000100000000000000000000000000
.................GAT-CTGATCGCTTACCTGAAATCGGC.......................................................................................................................................................................................................................................2611.001000100000000000000000000000000000000000000000000000000000000000
......................................ATCGGCTACCAAGTAAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1811.001001000000000000000000000000000000000000000000000000000000000000
.......................GATCGCTTACCTGAAATCGGCTAC....................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
........GAGCGTGGTGAT-CTGATCGCTTACC.................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
..............GGTGAT-CTGATCGCTTACCTGA..............................................................................................................................................................................................................................................2211.001000000000000000100000000000000000000000000000000000000000000000
.................GAT-CTGATCGCTTACCTGAAA............................................................................................................................................................................................................................................2111.001000000000000000000100000000000000000000000000000000000000000000
.....................CTGATCGCTTACCTGAAATC..........................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
............GTGGTGAT-CTGATCGCTTACCTGAA.............................................................................................................................................................................................................................................2511.001000000000000000000100000000000000000000000000000000000000000000
..................AT-CTGATCGCTTACCTGAAATCGGC.......................................................................................................................................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
.....AATGAGCGTGGTGAT-CTGATCGCC.....................................................................................................................................................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
.....................CTGATCGCTTACCTGAAATCGGCTACCAAGTA..............................................................................................................................................................................................................................3211.001000000000000000000000000000000000000000000000000000000000010000
..............GGTGAT-CTGATCGCTTACCTGAAATCGGC.......................................................................................................................................................................................................................................2911.001000100000000000000000000000000000000000000000000000000000000000
...CCAATGAGCGTGGTGAT-CTGATC........................................................................................................................................................................................................................................................2311.001000000000000000001000000000000000000000000000000000000000000000
........................ATCGCTTACCTGAAATCGGC.......................................................................................................................................................................................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
.....................CTGATCGCTTACCTGAAATCGGCTAC....................................................................................................................................................................................................................................2611.001000000000000000010000000000000000000000000000000000000000000000
...............................ACCTGAAATCGGCTACCAAGTAAA............................................................................................................................................................................................................................2411.001000000000000000000000010000000000000000000000000000000000000000
droMoj3
AGCCCAATGAGCGCGGTGAT-CTGATTGCCTATCTGAAGGCGGCTACTAAGTAAGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.................GAT-CTGATTGCCTATCTGAAGGCG.........................................................................................................................................................................................................................................2413.003100002
.................GAT-CTGATTGCCTATCTGAAGGCGG........................................................................................................................................................................................................................................2513.003001002
.................GAT-CTGATTGCCTATCTGAAGGCGGC.......................................................................................................................................................................................................................................2612.002001001
.................GAT-CTGATTGCCTATCTGAAGGC..........................................................................................................................................................................................................................................2312.002100001
................TGAT-CTGATTGCCTATCTGAA.............................................................................................................................................................................................................................................2111.001100000
...CCAATGAGCGCGGTGAT-CTGATTGC......................................................................................................................................................................................................................................................2511.001000001
AGCCCAATGAGCGCGGTGAT-CTGAT.........................................................................................................................................................................................................................................................2511.001100000
.GCCCAATGAGCGCGGTGAT-CTG...........................................................................................................................................................................................................................................................2211.001000001
..................AT-CTGATTGCCTATCTGAAGGCGG........................................................................................................................................................................................................................................2411.001100000
.................GAT-CTGATTGCCTATCTGAAGG...........................................................................................................................................................................................................................................2211.001100000
.......................GATTGCCTATCTGAAGGCGGCT......................................................................................................................................................................................................................................2211.001100000
..................................TGAAGGCGGCTACTAAGTAAG............................................................................................................................................................................................................................2111.001100000
AGCCCAATGAGCGCGGTGAT-CTGATTGC......................................................................................................................................................................................................................................................2811.001100000
..CCCAATGAGCGCGGTGAT-..............................................................................................................................................................................................................................................................1811.001100000
............GCGGTGAT-CTGATTGCCT....................................................................................................................................................................................................................................................1811.001000001
.......TGAGCGCGGTGAT-CTGATTGCCT....................................................................................................................................................................................................................................................2311.001000001
...................T-CTGATTGCCTATCTGAAGGC..........................................................................................................................................................................................................................................2111.001100000
......ATGAGCGCGGTGAT-CTGATT........................................................................................................................................................................................................................................................2011.001010000
....CAATGAGCGCGGTGAT-CT............................................................................................................................................................................................................................................................1811.001100000
.........................TTGCCTATCTGAAGGCGGCTACT...................................................................................................................................................................................................................................2311.001100000
......................................GGCGGCTACTAAGTAAGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1811.001100000
...............GTGAT-CTGATTGCCTATCTGAAG............................................................................................................................................................................................................................................2311.001100000
droGri2
AGCCCAACGAGCGTGGTGAT-CTGATTGCCTACCTCAAGTCGGCTACCAAGTAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
........................ATTGCCTACCTCAAGTCGGC.......................................................................................................................................................................................................................................2011.00110
AGCCCAACGAGCGTGGTGAT-CTGATT........................................................................................................................................................................................................................................................2611.00110
...................T-CTGATTGCCTACCTCAAG............................................................................................................................................................................................................................................1911.00110
........................ATTGCCTACCTCAAGTCGG........................................................................................................................................................................................................................................1911.00110
droAna3
AGCCCAACGAGCGCGGTGAT-CTGATCGCTTACCTGAAATCTGCCACCAAGTAAGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.GCCCAACGAGCGCGGTGAT-CT............................................................................................................................................................................................................................................................21112.0012200037
.....AACGAGCGCGGTGAT-CTGATCGCT.....................................................................................................................................................................................................................................................24111.0011400025
.GCCCAACGAGCGCGGTGAT-C.............................................................................................................................................................................................................................................................20110.0010410041
.........AGCGCGGTGAT-CTGATCGCT.....................................................................................................................................................................................................................................................2019.009500013
......ACGAGCGCGGTGAT-CTGATCGCT.....................................................................................................................................................................................................................................................2318.008200006
.........AGCGCGGTGAT-CTGATCGCTTACC.................................................................................................................................................................................................................................................2416.006600000
.GCCCAACGAGCGCGGTGAT-CTGAT.........................................................................................................................................................................................................................................................2416.006400002
.GCCCAACGAGCGCGGTGAT-CTGATCG.......................................................................................................................................................................................................................................................2615.005100004
......ACGAGCGCGGTGAT-CTGATCGCTTACC.................................................................................................................................................................................................................................................2715.005400010
AGCCCAACGAGCGCGGTGAT-CTGATC........................................................................................................................................................................................................................................................2614.004310000
......ACGAGCGCGGTGAT-CTGATCGCTTACCT................................................................................................................................................................................................................................................2814.004200110
.............CGGTGAT-CTGATCGCTTACC.................................................................................................................................................................................................................................................2014.004400000
........GAGCGCGGTGAT-CTGATCGCT.....................................................................................................................................................................................................................................................2113.003300000
.....AACGAGCGCGGTGAT-CTGAT.........................................................................................................................................................................................................................................................2013.003201000
............GCGGTGAT-CTGATCGCTTACC.................................................................................................................................................................................................................................................2113.003200001
.........AGCGCGGTGAT-CTGATCG.......................................................................................................................................................................................................................................................1823.006100005
.GCCCAACGAGCGCGGTGAT-CTGATCGCT.....................................................................................................................................................................................................................................................2813.003100002
...........................GCTTACCTGAAATCTGCCACC...................................................................................................................................................................................................................................2113.003210000
...................T-CTGATCGCTTACCTGAAATCTGCC......................................................................................................................................................................................................................................2512.002200000
.................GAT-CTGATCGCTTACCTGAAATCTGCC......................................................................................................................................................................................................................................2712.002110000
.........AGCGCGGTGAT-CTGATCGCTTACCTGA..............................................................................................................................................................................................................................................2712.002200000
.........AGCGCGGTGAT-CTGATCGCTTACCTG...............................................................................................................................................................................................................................................2612.002200000
...........CGCGGTGAT-CTGATCGCT.....................................................................................................................................................................................................................................................1812.002200000
...................................GAAATCTGCCACCAAGTA..............................................................................................................................................................................................................................1812.002200000
.................GAT-CTGATCGCTTACCTGA..............................................................................................................................................................................................................................................1912.002101000
...........CGCGGTGAT-CTGATCGCTTACC.................................................................................................................................................................................................................................................2212.002200000
.....AACGAGCGCGGTGAT-CTGA..........................................................................................................................................................................................................................................................1912.002200000
.....................CTGATCGCTTACCTGAAATCT.........................................................................................................................................................................................................................................2112.002100010
.GCCCAACGAGCGCGGTGAT-CTG...........................................................................................................................................................................................................................................................2212.002000002
........GAGCGCGGTGAT-CTGATCGCTTACCTG...............................................................................................................................................................................................................................................2712.002200000
...........................GCTTACCTGAAATCTGCCAC....................................................................................................................................................................................................................................2012.002020000
......ACGAGCGCGGTGAT-CTGATC........................................................................................................................................................................................................................................................2012.002100010
.................GAT-CTGATCGCTTACCTGAA.............................................................................................................................................................................................................................................2012.002200000
.GCCCAACGAGCGCGGTGAT-..............................................................................................................................................................................................................................................................1912.002000011
.................GAT-CTGATCGCTTACCTGAAATCTGC.......................................................................................................................................................................................................................................2612.002200000
.....................CTGATCGCTTACCTGAAATCTGCCACC...................................................................................................................................................................................................................................2712.002200000
..........................CGCTTACCTGAAATCTGCCACC...................................................................................................................................................................................................................................2212.002200000
.............................TTACCTGAAATCTGCCACC...................................................................................................................................................................................................................................1912.002020000
.......................GATCGCTTACCTGAAATCTGCCACCA..................................................................................................................................................................................................................................2612.002200000
.GCCCAACGAGCGCGGTGAT-CTGATC........................................................................................................................................................................................................................................................2512.002200000
.................GAT-CTGATCGCTTACCTGAAATCTGCCAC....................................................................................................................................................................................................................................2912.002110000
..................................TGAAATCTGCCACCAAGTAAGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2212.002110000
........................ATCGCTTACCTGAAATCTGCCACC...................................................................................................................................................................................................................................2412.002020000
.......CGAGCGCGGTGAT-CTGATCGCT.....................................................................................................................................................................................................................................................2212.002000002
..........GCGCGGTGAT-CTGATCGCTTACC.................................................................................................................................................................................................................................................2312.002110000
...............................ACCTGAAATCTGCCACCAA.................................................................................................................................................................................................................................1912.002200000
AGCCCAACGAGCGCGGTGAT-CT............................................................................................................................................................................................................................................................2212.002200000
.....AACGAGCGCGGTGAT-CTGATCGCTTACC.................................................................................................................................................................................................................................................2811.001100000
.......................GATCGCTTACCTGAAATCTGCCACCAAGT...............................................................................................................................................................................................................................2911.001100000
......................TGATCGCTTACCTGAAATCTGCCA.....................................................................................................................................................................................................................................2411.001100000
AGCCCAACGAGCGCGGTGAT-CTGATCG.......................................................................................................................................................................................................................................................2711.001100000
..............................TACCTGAAATCTGCCACCA..................................................................................................................................................................................................................................1911.001100000
............................CTTACCTGAAATCTGCCACC...................................................................................................................................................................................................................................2011.001010000
.......CGAGCGCGGTGAT-CTGAT.........................................................................................................................................................................................................................................................1811.001010000
..........GCGCGGTGAT-CTGATCGCTT....................................................................................................................................................................................................................................................2011.001100000
...............GTGAT-CTGATCGCTTACCTGAAATC..........................................................................................................................................................................................................................................2511.001100000
AGCCCAACGAGCGCGGTG.................................................................................................................................................................................................................................................................1811.001100000
.....................CTGATCGCTTACCTGAAATCTGCC......................................................................................................................................................................................................................................2411.001100000
..CCCAACGAGCGCGGTGAT-CT............................................................................................................................................................................................................................................................2011.001100000
..................AT-CTGATCGCTTACCTGAA.............................................................................................................................................................................................................................................1911.001100000
.......................GATCGCTTACCTGAAATCTGCCACCAA.................................................................................................................................................................................................................................2711.001100000
.......CGAGCGCGGTGAT-CTGATCG.......................................................................................................................................................................................................................................................2011.001100000
......................TGATCGCTTACCTGAAATCTGCCACC...................................................................................................................................................................................................................................2611.001100000
...................T-CTGATCGCTTACCTGAAATCTGCCACC...................................................................................................................................................................................................................................2811.001100000
..................AT-CTGATCGCTTACCTGAAATC..........................................................................................................................................................................................................................................2211.001000010
..............................TACCTGAAATCTGCCACCAAG................................................................................................................................................................................................................................2111.001100000
..............GGTGAT-CTGATCGCTTACCTGA..............................................................................................................................................................................................................................................2211.001100000
....CAACGAGCGCGGTGAT-CTGATC........................................................................................................................................................................................................................................................2211.001100000
.......CGAGCGCGGTGAT-CTGATCGCTTACC.................................................................................................................................................................................................................................................2611.001100000
..............GGTGAT-CTGATCGCTTACCT................................................................................................................................................................................................................................................2011.001010000
.................GAT-CTGATCGCTTACCTGAAA............................................................................................................................................................................................................................................2111.001010000
.GCCCAACGAGCGCGGTGAT-CTGA..........................................................................................................................................................................................................................................................2311.001000001
AGCCCAACGAGCGCGGTGAT-C.............................................................................................................................................................................................................................................................2111.001100000
..............GGTGAT-CTGATCGCTTACC.................................................................................................................................................................................................................................................1911.001100000
................TGAT-CTGATCGCTTACCTGAAATCTGCC......................................................................................................................................................................................................................................2811.001100000
...........................GCTTACCTGAAATCTGCCA.....................................................................................................................................................................................................................................1911.001100000
.....................CTGATCGCTTACCTGAAATCTGCCACCA..................................................................................................................................................................................................................................2811.001100000
.........AGCGCGGTGAT-CTGATCGCTT....................................................................................................................................................................................................................................................2111.001100000
........................ATCGCTTACCTGAAATCTGCC......................................................................................................................................................................................................................................2111.001100000
..............................TACCTGAAATCTGCCACCAAGTA..............................................................................................................................................................................................................................2311.001100000
...........CGCGGTGAT-CTGATCGCTTACCTG...............................................................................................................................................................................................................................................2411.001100000
..........................CGCTTACCTGAAATCTGCCACA...................................................................................................................................................................................................................................2211.001010000
AGCCCAACGAGCGCGGTGAT-CTGA..........................................................................................................................................................................................................................................................2411.001100000
................TGAT-CTGATCGCTTACCTGA..............................................................................................................................................................................................................................................2011.001010000
..................................TGAAATCTGCCACCAAGTA..............................................................................................................................................................................................................................1911.001100000
.......................GATCGCTTACCTGAAATCTGCCACC...................................................................................................................................................................................................................................2511.001100000
...............GTGAT-CTGATCGCTTACC.................................................................................................................................................................................................................................................1811.001100000
.............................TTACCTGAAATCTGCCACCAAGT...............................................................................................................................................................................................................................2311.001010000
...............................ACCTGAAATCTGCCACCAAGT...............................................................................................................................................................................................................................2111.001010000
.......CGAGCGCGGTGAT-CTGATCGCTTACCTG...............................................................................................................................................................................................................................................2811.001100000
........................ATCGCTTACCTGAAATCT.........................................................................................................................................................................................................................................1811.001010000
...............GTGAT-CTGATCGCTTACCTGAAA............................................................................................................................................................................................................................................2311.001100000
..........................CGCTTACCTGAAATCTGCCACCAAGTA..............................................................................................................................................................................................................................2711.001100000
..........................CGCTTACCTGAAATCTGCC......................................................................................................................................................................................................................................1911.001100000
..............................TACCTGAAATCTGCCACC...................................................................................................................................................................................................................................1811.001010000
.......CGAGCGCGGTGAT-CTGATC........................................................................................................................................................................................................................................................1911.001010000
............GCGGTGAT-CTGATCGCTTACCTGAAA............................................................................................................................................................................................................................................2611.001100000
..CCCAACGAGCGCGGTGAT-CTG...........................................................................................................................................................................................................................................................2111.001000010
.......................GATCGCTTACCTGAAATCTGC.......................................................................................................................................................................................................................................2111.001100000
...............GTGAT-CTGATCGCTTACCTGA..............................................................................................................................................................................................................................................2111.001100000
................TGAT-CTGATCGCTTACCTGAA.............................................................................................................................................................................................................................................2111.001100000
......ACGAGCGCGGTGAT-CTGATCGC......................................................................................................................................................................................................................................................2211.001000001
...CCAACGAGCGCGGTGAT-CT............................................................................................................................................................................................................................................................1911.001000010
.................GAT-CTGATCGCTTACCTGAAATCTG........................................................................................................................................................................................................................................2511.001010000
....CAACGAGCGCGGTGAT-CTGAT.........................................................................................................................................................................................................................................................2111.001010000
........GAGCGCGGTGAT-CTGATCGCTTACC.................................................................................................................................................................................................................................................2511.001100000
.......................GATCGCTTACCTGAAATCTGCCA.....................................................................................................................................................................................................................................2311.001010000
.............................TTACCTGAAATCTGCCACCA..................................................................................................................................................................................................................................2011.001100000
............GCGGTGAT-CTGATCGCTTACCTGAAATC..........................................................................................................................................................................................................................................2811.001100000
droBip1
AGCCCAACGAGCGCGGTGAC-CTGATCGCTTACCTGAAGTCTGCCACCAAGTAAGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
AGCCCAATGAGCGTGGCGAT-CTGATTGCCTACCTGAAGTCCGCCACCAAGTAAGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
C---------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTCCATCCAATAAACTCACC---A--ACCATTGCAGGATGTCTAA-TGTATTA----TTGTGTTCAGTCACAGTCCGGCAAACAACCGCAA---CA--------CAGCSizeHit CountTotal NormTotal
No Reads
droEle1
TG-------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCTATC-----AACTTACC---A--ACCACTGCAGGATGTCTTACTGTATTA----TTGTGTTCAGTCACAGTCCGGCAAACAACCGCAA---CAGCAG-AAACAACSizeHit CountTotal NormTotal
No Reads
droRho1
TG-------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCCATC-----AACTCACC---A--ACCACTGCAGGATGTCTAACTGTATTA----TTGTGTTCAGTCACAGTCCGGCAAACAATCGCAG---CAGCAG-AAACAACSizeHit CountTotal NormTotal
No Reads
droBia1
AGCCCAACGAGCGCGGCGAC-CTGATCGCCTACCTGAAGTCGGCCACCAAGTAAGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
AC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATC-----AACTCACCAACA--ACCTCTGCAGGATGTCCAACTGTATTA----TTGTGTTCAGTCACAGTCCGGCAAACAACCGCAA---CAGCAG-CAACAACSizeHit CountTotal NormTotal
No Reads
droEug1
TG-------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCCATC-----AACTCGCCCAAA--ACCACTGCAGGATGTCTAACTGTATTA----TTGTGTTCAGTCACAGTCCGGCAAAAAACCGCAA---CAGCAGCAAACAACSizeHit CountTotal NormTotal
No Reads
dm3
TG-------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCCATC-----AACTTACCCACA--ACCACTGCAGGATGTCAAACTGTATTA----TTGTGTTCAGTCACAGTCCGGCACGCAAATGCAG---CA----------GCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................................................................................................................................................................................CA--ACCACTGCAGGATGTCA.................................................................19130.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000031300000100000020100400000000000000000000003000000000000000000000000000010000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
............................................................................................................................................................................................ACA--ACCACTGCAGGATGTC..................................................................19129.002900000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000021300000200001240100200000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................ACCCACA--ACCACTGCAGGATGTCA.................................................................24121.00210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001800000204000310000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................TACCCACA--ACCACTGCAGGATGTC..................................................................24117.00170000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001710000100000000000400000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.................................................................................................................................................................................................................................TGTGTTCAGTCACAGTCCGGC.............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................TCCGGCACGCAAATGCAG---C.............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................TGTCAAACTGTATTA----TTGTGT.............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................TGTTCAGTCACAGTCCGGCACGCA........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................GATGTCAAACTGTATTA----TTGTGTTCAG.........................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
..................................................................................................................................................................................................CCACTGCAGGATGTCAAA...............................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................CAGTCACAGTCCGGCACGCAAATGCA..................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................TGTTCAGTCACAGTCCGGCA............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................TGTCCATC-----AACTTACCCACA--..................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................ACTTACCCACA--ACCACTGCAGGATGTC..................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................GTCAAACTGTATTA----TTGTGTTCAGTCA......................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................ACCACTGCAGGATGTCAAACTGTATTA----...................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................AGTCACAGTCCGGCACGC.........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................TTCAGTCACAGTCCGGCACGCAAAT.....................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................TTCAGTCACAGTCCGGCA............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................ACCCACA--ACCACTGCAGGATGTCAAAC..............................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................A----TTGTGTTCAGTCACAGTCCGGC.............................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................TCCATC-----AACTTACCCACA--ACCACTGCA.........................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................CACA--ACCACTGCAGGATGTCAAACTGTA..........................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TG-------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCCATC-----AACTTACC........................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................TGTATTA----TTGTGTTCAGTC.......................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................CCACTGCAGGATGTCAAAC..............................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................TGTGTTCAGTCACAGTCCGGCACGC.........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................TTGTGTTCAGTCACAGTCCG...............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................ACCCACA--ACCACTGCAGGATGTA..................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................TGTCAAACTGTATTA----TTGTGTTC...........................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
......................................................................................................................................................................................TTACCCACA--ACCACTGCA.........................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................ACTTACCCACA--ACCACTGCAGGATGTCA.................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................TACCCACA--ACCACTGCAGGATGTCAAACT.............................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................GTCCGGCACGCAAATGCAG---CA----------GC2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................ACTGTATTA----TTGTGTTCAGTCACAGT..................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.............................................................................................................................................................................................CA--ACCACTGCAGGATGTCAAACTGT...........................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................ACA--ACCACTGCAGGATGTCAAACTGTATT........................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................TGCAGGATGTCAAACTGTATTA----TTGT...............................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................TGCAGGATGTCAAACTGT...........................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TG-------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCCATC-----AACTCACCCACA--ACCACTGCAGGATGTAAAACTGTATTA----TTGTGTTCAGTCACAGTCCGGCAAGCAAATGCAG---CA----------GCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................................................................................................................................................CTGCAGGATGTAAAACTG............................................................1817.00741200000000000000
....................................................................................................................................................................................................................................GTTCAGTCACAGTCCGGC.............................1817.00701600000000000000
.........................................................................................................................................................................................................................TTA----TTGTGTTCAGTCACAGTCCGGC.............................2515.00500400000100000000
.........................................................................................................................................................................................................AGGATGTAAAACTGTATTA----TTGT...............................................2314.00401300000000000000
........................................................................................................................................................................................................................................AGTCACAGTCCGGCAAGC.........................1813.00302100000000000000
..............................................................................................................................................................................................A--ACCACTGCAGGATGTAAAACT.............................................................2213.00300300000000000000
........................................................................................................................................................................................................................ATTA----TTGTGTTCAGTCACAGTCCGGC.............................2613.00300300000000000000
....................................................................................................................................................................................................................................GTTCAGTCACAGTCCGGCAAGC.........................2213.00301200000000000000
..............................................................................................................................................................................................A--ACCACTGCAGGATGTAAAACTG............................................................2312.00200200000000000000
....................................................................................................................................................................................................ACTGCAGGATGTAAAACT.............................................................1812.00200100000000100000
.........................................................................................................................................................................................................AGGATGTAAAACTGTATT........................................................1812.00200200000000000000
...................................................................................................................................................................................................CACTGCAGGATGTAAAAC..............................................................1812.00211000000000000000
..........................................................................................................................................................................................................................TA----TTGTGTTCAGTCACAGTCCGGC.............................2412.00200100001000000000
.................................................................................................................................................................................................ACCACTGCAGGATGTAAAACT.............................................................2112.00200200000000000000
..............................................................................................................................................................................................A--ACCACTGCAGGATGTAAAACTGTATT........................................................2712.00201010000000000000
..........................................................................................................................................................................................................GGATGTAAAACTGTATTA----TTGTGTTC...........................................2612.00202000000000000000
..............................................................................................................................................................................................................GTAAAACTGTATTA----TTGT...............................................1812.00200200000000000000
.................................................................................................................................................................................................................................TGTGTTCAGTCACAGTCCGGCA............................2212.00201010000000000000
.......................................................................................................................................................................................................................................CAGTCACAGTCCGGCAAGCA........................2011.00100010000000000000
...................................................................................................................................................................................................................................TGTTCAGTCACAGTCCGGC.............................1911.00100100000000000000
.................................................................................................................................................................................................ACCACTGCAGGATGTAAAAC..............................................................2011.00110000000000000000
..............................................................................................................................................................................................A--ACCACTGCAGGATGTAAAACTGT...........................................................2411.00100100000000000000
.......................................................................................................................................................................................................................................CAGTCACAGTCCGGCAAGC.........................1911.00110000000000000000
......................................................................................................................................................................................................TGCAGGATGTAAAACT.............................................................1611.00100000000001000000
........................................................................................................................................................................................................................................AGTCACAGTCCGGCAAGCAAATGCAG---..............2611.00100000000000100000
..................................................................................................................................................................................................................................GTGTTCAGTCACAGTCCGGC.............................2011.00100100000000000000
..................................................................................................................................................................................................................................................CGGCAAGCAAATGCAG---CA----------..1811.00100010000000000000
........................................................................................................................................................................................................................................AGTCACAGTCCGGCAAGCAAATGCAG---C.............2711.00100000000000100000
........................................................................................................................................................................................................................ATTA----TTGTGTTCAGTCACAGTCCGGG.............................2611.00100100000000000000
.....................................................................................................................................................................CTGTCCATC-----AACTCACCCACA--..................................................................................2111.00100001000000000000
......................................................................................................................................................................................................................GTATTA----TTGTGTTCAGTCACAGTCCGGC.............................2811.00101000000000000000
...............................................................................................................................................................................................................TAAAACTGTATTA----TTGTGTTCAGTCA......................................2611.00100000001000000000
...................................................................................................................................................................................................................................TGTTCAGTCACAGTCCGGCAAGCAA.......................2511.00100000000010000000
......................................................................................................................................................................................TCACCCACA--ACCACTGCAGGAT.....................................................................2211.00100010000000000000
....................................................................................................................................................................................................ACTGCAGGATGTAAAACTG............................................................1911.00100100000000000000
.............................................................................................................................................................................................................................................CAGTCCGGCAAGCAAATGCAG---C.............2211.00100010000000000000
.......................................................................................................................................................................GTCCATC-----AACTCACCCACA--ACCACT............................................................................2511.00100100000000000000
...........................................................................................................................................................................................CACA--ACCACTGCAGGATGTAAAAC..............................................................2411.00100100000000000000
..................................................................................................................................................................................................CCACTGCAGGATGTAAAACTGT...........................................................2211.00100100000000000000
.........................................................................................................................................................................................................AGGATGTAAAACTGTATTA----TTGTGTTCAGT........................................3011.00100000001000000000
....................................................................................................................................................................................................................CTGTATTA----TTGTGTTCAGTCACAGTCC................................2711.00100100000000000000
...................................................................................................................................................................................................CACTGCAGGATGTAAAACT.............................................................1911.00100100000000000000
..........................................................................................................................................................................................CCACA--ACCACTGCAGGATGTAAAAC..............................................................2511.00100010000000000000
.....................................................................................................................................................................................................CTGCAGGATGTAAAACTGTA..........................................................2011.00101000000000000000
................................................................................................................................................................................................................................TTGTGTTCAGTCACAGTCCGGCA............................2311.00101000000000000000
...............................................................................................................................................................................................................................................GTCCGGCAAGCAAATG....................1611.00100000000001000000
..................................................................................................................................................................................................CCACTGCAGGATGTAAAACT.............................................................2011.00101000000000000000
...............................................................................................................................................................................................................TAAAACTGTATTA----TTGTGTTC...........................................2111.00100010000000000000
..................................................................................................................................................................................................................................GTGTTCAGTCACAGTCCGGCA............................2111.00100000001000000000
.........................................................................................................................................................................................................AGGATGTAAAACTGTATTA----TTGTGTT............................................2611.00100000001000000000
..........................................................................................................................................................................................CCACA--ACCACTGCAGGATGTAAAACT.............................................................2611.00100100000000000000
...........................................................................................................................................................................................CACA--ACCACTGCAGGATGTAAAACTGTA..........................................................2811.00100000001000000000
...........................................................................................................................................................................................................GATGTAAAACTGTATTA----TTGTGTTCA..........................................2611.00100000000000100000
..........................................................................................................................................................................................................GGATGTAAAACTGTATTA----TTGTGTT............................................2511.00100000001000000000
...................................................................................................................................................................................................CACTGCAGGATGTAAAACTG............................................................2011.00110000000000000000
........................................................................................................................................................................................ACCCACA--ACCACTGCAGGATGTAAAACT.............................................................2811.00100100000000000000
............................................................................................................................................................................................ACA--ACCACTGCAGGATGTAAAACT.............................................................2411.00100010000000000000
..............................................................................................................................................................................................................GTAAAACTGTATTA----TTGTGTTCAGT........................................2511.00100100000000000000
............................................................................................................................................................................................................................................ACAGTCCGGCAAGCAAATGCAG---CA----------G.2511.00101000000000000000
..................................................................................................................................................................................................CCACTGCAGGATGTAAAACTGG...........................................................2211.00100100000000000000
.................................................................................................................................................................................................ACCACTGCAGGATGTAAAACTGT...........................................................2311.00100100000000000000
..........................................................................................................................................................................................................GGATGTAAAACTGTATTA----TTGT...............................................2211.00100100000000000000
.................................................................................................................................................................................................................................TGTGTTCAGTCACAGTCCGGCAAGCAAA......................2811.00100000010000000000
.............................................................................................................................................................................................................TGTAAAACTGTATTA----TTGTGTTCAG.........................................2511.00100000001000000000
...............................................................................................................................................................................................................................................GTCCGGCAAGCAAATGCAG---CA----------GC2311.00100000000000100000
droSec2
TG-------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCCATC-----AACTCACCCACA--ACCACTGCAGGATGTCAAACTGTATTA----TTGTGTTCAGTCACAGTCCGGCAAGCAAATGC-------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....................................................................................................................................................................................................................................GTTCAGTCACAGTCCGGC.............................18110.00101081
........................................................................................................................................................................................................................................AGTCACAGTCCGGCAAGCAAATGC-------------------2414.0040040
....................................................................................................................................................................................................................................GTTCAGTCACAGTCCGGCAAGC.........................2214.0041120
........................................................................................................................................................................................................................................AGTCACAGTCCGGCAAGC.........................1813.0030030
.......................................................................................................................................................................................CACCCACA--ACCACTGCAGGATGTC..................................................................2413.0030030
......................................................................................................................................................................................................................................TCAGTCACAGTCCGGCAAG..........................1912.0021010
....................................................................................................................................................................................................................................GTTCAGTCACAGTCCGGCAAGCAAATGC-------------------2812.0020110
...........................................................................................................................................................................................................................................CACAGTCCGGCAAGCAAAT.....................1912.0021010
.........................................................................................................................................................................................CCCACA--ACCACTGCAGGATGTCAAACT.............................................................2712.0020020
........................................................................................................................................................................................................................ATTA----TTGTGTTCAGTCACAGTCCGGCA............................2712.0021010
......................................................................................................................................................................................................................GTATTA----TTGTGTTCAGTCACA....................................2112.0020020
.............................................................................................................................................................................................CA--ACCACTGCAGGATGTC..................................................................1812.0020020
....................................................................................................................................................................................................................................GTTCAGTCACAGTCCGGCA............................1912.0020020
...................................................................................................................................................................................................CACTGCAGGATGTCAAACT.............................................................1912.0020020
........................................................................................................................................................................................................................ATTA----TTGTGTTCAGTCACA....................................1912.0020011
........................................................................................................................................................................................ACCCACA--ACCACTGCAGGA......................................................................1912.0020020
....................................................................................................................................................................................................ACTGCAGGATGTCAAACTGTATT........................................................2312.0022000
..............................................................................................................................................................................................................................................AGTCCGGCAAGCAAATGC-------------------1811.0010010
......................................................................................................................................................................................................TGCAGGATGTCAAACTGTATTA----TTGTGT.............................................2811.0011000
........................................................................................................................................................................................ACCCACA--ACCACTGCAGGATGTC..................................................................2311.0010010
...........................................................................................................................................................................................CACA--ACCACTGCAGGATGTC..................................................................2011.0011000
.......................................................................................................................................................................................CACCCACA--ACCACTGCAGGATGTCA.................................................................2511.0010010
.....................................................................................................................................................................................................................................TTCAGTCACAGTCCGGCAAGCAAATG....................2611.0011000
.......................................................................................................................................................................................CACCCACA--ACCACTGCAGGA......................................................................2011.0011000
............................................................................................................................................................................................................ATGTCAAACTGTATTA----TTGTGTTCA..........................................2511.0010010
.........................................................................................................................................................................................................................................GTCACAGTCCGGCAAGCAAATGC-------------------2311.0010010
............................................................................................................................................................................................................ATGTCAAACTGTATTA----TTGTGTT............................................2311.0010100
........................................................................................................................................................................................ACCCACA--ACCACTGCAGGAT.....................................................................2011.0010010
.........................................................................................................................................................................................................................TTA----TTGTGTTCAGTCACAGTCCGGCAAGC.........................2911.0010100
.....................................................................................................................................................................................................................TGTATTA----TTGTGTTCAGTCACA....................................2211.0010010
.......................................................................................................................................................................................CACCCACA--ACCACTGCAGG.......................................................................1911.0010010
..............................................................................................................................................................................................A--ACCACTGCAGGATGTCAAACT.............................................................2211.0011000
..........................................................................................................................................................................................................GGATGTCAAACTGTATTA----TTGT...............................................2211.0011000
................................................................................................................................................................................................................................TTGTGTTCAGTCACAGTCCGGCAAGCA........................2711.0010100
............................................................................................................................................................................................................................................ACAGTCCGGCAAGCAAATGC-------------------2011.0010010
.....................................................................................................................................................................................................................................TTCAGTCACAGTCCGGCAAGC.........................2111.0010010
.....................................................................................................................................................................................................................................TTCAGTCACAGTCCGGCAAGCA........................2211.0010100
.........................................................................................................................................................................................................................................GTCACAGTCCGGCAAGCA........................1811.0010001
....................................................................................................................................................................................................................................GTTCAGTCACAGTCCGGCAA...........................2011.0010100
......................................................................................................................................................................................................................GTATTA----TTGTGTTCAGTCACAGT..................................2311.0010010
.........................................................................................................................................................................................................................TTA----TTGTGTTCAGTCACAGTCC................................2211.0011000
.................................................................................................................................................................................................ACCACTGCAGGATGTCAAACTGTAT.........................................................2511.0011000
.......................................................................................................................................................................................CACCCACA--ACCACTGCAGGATGTCAAA...............................................................2711.0010010
...........................................................................................................................................................................................................................................CACAGTCCGGCAAGCAAATGC-------------------2111.0010010
..........................................................................................................................................................................CATC-----AACTCACCCACA--ACCACTGCAGGA......................................................................2811.0010010
..................................................................................................................................................................................................CCACTGCAGGATGTCAAAC..............................................................1911.0011000
.................................................................................................................................................................................................................................TGTGTTCAGTCACAGTCCGGCAAGCA........................2611.0011000
.............................................................................................................................................................................................CA--ACCACTGCAGGATGTCAAACT.............................................................2311.0010010
.......................................................................................................................................................................................................................................CAGTCACAGTCCGGCAAGC.........................1911.0010010
....................................................................................................................................................................................ACTCACCCACA--ACCACTGCAGGATGTCA.................................................................2811.0010100
.........................................................................................................................................................................................................AGGATGTCAAACTGTATTA----TTGT...............................................2311.0010010
..................................................................................................................................................................................................CCACTGCAGGATGTCAAACT.............................................................2011.0011000
....................................................................................................................................................................................................ACTGCAGGATGTCAAACTGT...........................................................2011.0010010
.............................................................................................................................................................................................CA--ACCACTGCAGGATGTCAAACTGT...........................................................2511.0010010
....................................................................................................................................................................................................................................GTTCAGTCACAGTCCGGCAAG..........................2111.0010010
.......................................................................................................................................................................................CACCCACA--ACCACTGCAGGAT.....................................................................2111.0010010
............................................................................................................................................................................................ACA--ACCACTGCAGGATGTCA.................................................................2011.0010010
....................................................................................................................................................................................................................................GTTCAGTCACAGTCCGGCAAGCA........................2311.0010010
.................................................................................................................................................................................................ACCACTGCAGGATGTCAAACTGTA..........................................................2411.0011000
............................................................................................................................................................................................ACA--ACCACTGCAGGATGTCAAACTGT...........................................................2611.0010010
..............................................................................................................................................................................................A--ACCACTGCAGGATGTCAAAC..............................................................2111.0011000
.....................................................................................................................................................................................CTCACCCACA--ACCACTGCATT.......................................................................2111.0010010
...........................................................................................................................................................................................CACA--ACCACTGCAGGATGTCAAACTGT...........................................................2711.0010010
......................................................................................................................................................................................................................................TCAGTCACAGTCCGGCAAGCA........................2111.0010100
...........................................................................................................................................................................................................................A----TTGTGTTCAGTCACAGTCCGGCA............................2411.0011000
.....................................................................................................................................................................................................CTGCAGGATGTCAAACTGTA..........................................................2011.0011000
............................................................................................................................................................................................................ATGTCAAACTGTATTA----TTGT...............................................2011.0011000
.................................................................................................................................................................................................................AAACTGTATTA----TTGTGTTCA..........................................2011.0010010
........................................................................................................................................................................................................................................AGTCACAGTCCGGCAAGCA........................1911.0010010
droYak3
TG-------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCCATC-----AACTCACCCACA--ACCACTGCAGGATGTCAAACTGTATTA----TTGTGTTCAGTCACAGTCCGGCAAGCAACCGC-------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
....................................................................................................................................................................................................................................GTTCAGTCACAGTCCGGCAAGC.........................22110.001023300110000
..............................................................................................................................................................................................A--ACCACTGCAGGATGTCAAACT.............................................................2218.00812500000000
....................................................................................................................................................................................................................................GTTCAGTCACAGTCCGGC.............................1815.00500400100000
....................................................................................................................................................................................................................................GTTCAGTCACAGTCCGGCAAGCAACCGC-------------------2814.00402020000000
..........................................................................................................................................................................................................GGATGTCAAACTGTATTA----TTGT...............................................2214.00440000000000
........................................................................................................................................................................................................................ATTA----TTGTGTTCAGTCACA....................................1914.00403100000000
................................................................................................................................................................................................................................TTGTGTTCAGTCACAGTCCGGC.............................2213.00301200000000
..............................................................................................................................................................................................A--ACCACTGCAGGATGTCA.................................................................1813.00310110000000
...........................................................................................................................................................................................................GATGTCAAACTGTATTA----TTGT...............................................2113.00301000020000
..........................................................................................................................................................................................................GGATGTCAAACTGTATTA----TTGTGTTC...........................................2612.00220000000000
......................................................................................................................................................................................................................GTATTA----TTGTGTTCAGTCACA....................................2112.00202000000000
..............................................................................................................................................................................................A--ACCACTGCAGGATGTCAAACC.............................................................2212.00210100000000
..............................................................................................................................................................................................A--ACCACTGCAGGATGTCAAACTGT...........................................................2412.00201100000000
......................................................................................................................................................................................................................................TCAGTCACAGTCCGGCAAGC.........................2012.00200100010000
..................................................................................................................................................................................................................AACTGTATTA----TTGTGTTCAGTCA......................................2312.00202000000000
............................................................................................................................................................................................................ATGTCAAACTGTATTA----TTGTG..............................................2112.00200110000000
...................................................................................................................................................................................................................................TGTTCAGTCACAGTCCGGC.............................1912.00201100000000
.............................................................................................................................................................................................CA--ACCACTGCAGGATGTCAAACTGT...........................................................2512.00201100000000
.............................................................................................................................................................................................CA--ACCACTGCAGGATGTCAAACT.............................................................2312.00220000000000
.......................................................................................................................................................................................................................................CAGTCACAGTCCGGCAAGC.........................1912.00202000000000
....................................................................................................................................................................................................ACTGCAGGATGTCAAACT.............................................................1812.00200200000000
..................................................................................................................................................................................................................................GTGTTCAGTCACAGTCCGGC.............................2012.00200200000000
.................................................................................................................................................................................................ACCACTGCAGGATGTCAAACTGTATT........................................................2612.00220000000000
..................................................................................................................................................................................................CCACTGCAGGATGTCAAACT.............................................................2012.00201010000000
.........................................................................................................................................................................................................................................GTCACAGTCCGGCAAGCAACCGC-------------------2312.00201010000000
....................................................................................................................................................................................................................................GTTCAGTCACAGTCCGGCAAGCAACC.....................2612.00201100000000
.............................................................................................................................................................................................................TGTCAAACTGTATTA----TTGT...............................................1912.00200200000000
......................................................................................................................................................................................................................GTATTA----TTGTGTTCAGTCACAGTCCGGC.............................2812.00201100000000
.........................................................................................................................................................................................................AGGATGTCAAACTGTATTA----TTGT...............................................2312.00220000000000
..............................................................................................................................................................................................................GTCAAACTGTATTA----TTGT...............................................1811.00100100000000
.....................................................................................................................................................................................CTCACCCACA--ACCACTGCAGGAT.....................................................................2311.00101000000000
........................................................................................................................................................................................................................................AGTCACAGTCCGGCAAGCA........................1911.00110000000000
....................................................................................................................................................................................................................................GTTCAGTCACAGTCCGGCAAG..........................2111.00101000000000
.........................................................................................................................................................................................................................................GTCACAGTCCGGCAAGCAA.......................1911.00100000010000
.............................................................................................................................................................................................CA--ACCACTGCAGGATGTCAAACC.............................................................2311.00100100000000
............................................................................................................................................................................TC-----AACTCACCCACA--ACCACTGCAGGAT.....................................................................2711.00100010000000
.G-------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCCATC-----AACTCACCCA......................................................................................2011.00101000000000
...................................................................................................................................................................................................CACTGCAGGATGTCAAACT.............................................................1911.00101000000000
............................................................................................................................................................................................ACA--ACCACTGCAGGATGTCA.................................................................2011.00100000010000
.....................................................................................................................................................................................................................................TTCAGTCACAGTCCGGCAAGCAACCGC-------------------2711.00101000000000
.......................................................................................................................................................................................................GCAGGATGTCAAACTGTA..........................................................1811.00100100000000
.............................................................................................................................................................................................CA--ACCACTGCAGGATGTCA.................................................................1911.00101000000000
......................................................................................................................................................................................................................................TCAGTCACAGTCCGGCAAGCAACCGC-------------------2611.00101000000000
.................................................................................................................................................................................................................................TGTGTTCAGTCACAGTCCGGC.............................2111.00101000000000
...........................................................................................................................................................................................................GATGTCAAACTGTATTA----TTGTGT.............................................2311.00100000010000
........................................................................................................................................................................................................................................AGTCACAGTCCGGCAAGCAACC.....................2211.00100000010000
..........................................................................................................................................................................................................................TA----TTGTGTTCAGTCACAGTCCGGCA............................2511.00100000010000
.................................................................................................................................................................................................................AAACTGTATTA----TTGTGTTCAGTCACA....................................2611.00101000000000
.................................................................................................................................................................................................................................TGTGTTCAGTCACAGTCCGGCA............................2211.00101000000000
.......................................................................................................................................................................GTCCATC-----AACTCACCCACA--AC................................................................................2111.00100100000000
..................................................................................................................................................................................................................................GTGTTCAGTCACAGTCCGGCAAGC.........................2411.00100100000000
.................................................................................................................................................................................................ACCACTGCAGGATGTCAAAC..............................................................2011.00110000000000
..........................................................................................................................................................................................CCACA--ACCACTGCAGGATGC...................................................................2011.00100100000000
....................................................................................................................................................................................................................................GTTCAGTCACAGTCCGGCAAGCAAC......................2511.00100100000000
......................................................................................................................................................................TGTCCATC-----AACTCACCCACA--ACCACTGCA.........................................................................2911.00101000000000
....................................................................................................................................................................................................ACTGCAGGATGTCAAACTGT...........................................................2011.00100010000000
....................................................................................................................................................................................................................................GTTCAGTCACAGTCCGGCAAGCAA.......................2411.00101000000000
.........................................................................................................................................................................................................................TTA----TTGTGTTCAGTCACA....................................1811.00101000000000
...........................................................................................................................................................................................CACA--ACCACTGCAGGATGTCAA................................................................2211.00101000000000
.....................................................................................................................................................................................CTCACCCACA--ACCACTGCAGGA......................................................................2211.00100100000000
...........................................................................................................................................................................................................GATGTCAAACTGTATTA----TTGTGTTCAGT........................................2811.00110000000000
..............................................................................................................................................................................................................GTCAAACTGTATTA----TTGTGTTCAG.........................................2411.00100010000000
.G-------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCCATC-----AACTCACCC.......................................................................................1911.00100100000000
....................................................................................................................................................................................ACTCACCCACA--ACCACTGCAGGATGTC..................................................................2711.00110000000000
........................................................................................................................................................................................................................ATTA----TTGTGTTCAGTCACAGTCCGGCA............................2711.00100100000000
.........................................................................................................................................................................................................AGGATGTCAAACTGTATTA----TTGTGTT............................................2611.00100000010000
.................................................................................................................................................................................................ACCACTGCAGGATGTCAAACTGTATTA----...................................................2711.00101000000000
....................................................................................................................................................................................................ACTGCAGGATGTCAAACTGTA..........................................................2111.00101000000000
........................................................................................................................................................................................ACCCACA--ACCACTGCAGGA......................................................................1911.00101000000000
.......................................................................................................................................................................................CACCCACA--ACCACTGCAGGAT.....................................................................2111.00101000000000
.............................................................................................................................................................................................................................................CAGTCCGGCAAGCAACCGC-------------------1911.00101000000000
..........................................................................................................................................................................................................................TA----TTGTGTTCAGTCACAGTCCGGC.............................2411.00100100000000
..............................................................................................................................................................................................................GTCAAACTGTATTA----TTGTG..............................................1911.00101000000000
..........................................................................................................................................................................................CCACA--ACCACTGCAGGATGTCAAACTGTA..........................................................2911.00110000000000
........................................................................................................................................................................................................................ATTA----TTGTGTTCAGTCACAGTC.................................2211.00100100000000
......................................................................................................................................................................................................................GTATTA----TTGTGTTCAGTCAC.....................................2011.00100010000000
..................................................................................................................................................................................................CCACTGCAGGATGTCAAACTGT...........................................................2211.00101000000000
.......................................................................................................................................................................GTCCATC-----AACTCACCCACA--ACCAC.............................................................................2411.00100100000000
.............................................................................................................................................................................................CA--ACCACTGCAGGATGTCAAACTGTAT.........................................................2711.00100100000000
..............................................................................................................................................................................................A--ACCACTGCAGGATGTCAAACTGC...........................................................2411.00110000000000
.............................................................................................................................................................................C-----AACTCACCCACA--ACCACTGCAGGATGT...................................................................2811.00100000010000
..............................................................................................................................................................................................................GTCAAACTGTATTA----TTGC...............................................1811.00100100000000
.............................................................................................................................................................................C-----AACTCACCCACA--ACCACTGCAGGAC.....................................................................2611.00100100000000
.....................................................................................................................................................................CTGTCCATC-----AACTCACCCAC.....................................................................................2011.00101000000000
.......................................................................................................................................................................GTCCATC-----AACTCACCCACA--ACCACC............................................................................2511.00100100000000
............................................................................................................................................................................................................................................ACAGTCCGGCAAGCAACCGC-------------------2011.00101000000000
.......................................................................................................................................................................GTCCATC-----AACTCACCCACA--ACCACTGCAG........................................................................2911.00101000000000
....................................................................................................................................................................................................................................GTTCAGTCACAGTCCGGCA............................1911.00100010000000
.................................................................................................................................................................................................ACCACTGCAGGATGTCAAACT.............................................................2111.00100100000000
.............................................................................................................................................................................C-----AACTCACCCACA--ACCACTGCAGGAT.....................................................................2611.00101000000000
....................................................................................................................................................................................ACTCACCCACA--ACCACTGCAGGATGT...................................................................2611.00101000000000
.................................................................................................................................................................................................ACCACTGCAGGATGTCAAACTGT...........................................................2311.00110000000000
.......................................................................................................................................................................................CACCCACA--ACCACTGCAGGATGTCAAACT.............................................................2911.00100100000000
........................................................................................................................................................................................ACCCACA--ACCACTGCAGGAT.....................................................................2011.00100100000000
........................................................................................................................................................................................ACCCACA--ACCACTGCAGGATGTCAAACT.............................................................2811.00100100000000
............................................................................................................................................................................................................ATGTCAAACTGTATTA----TTGC...............................................2011.00100100000000
...........................................................................................................................................................................................................................A----TTGTGTTCAGTCACAGTCCGGCA............................2411.00101000000000
............................................................................................................................................................................................ACA--ACCACTGCAGGATGTCAAACTGTATT........................................................2911.00100100000000
...........................................................................................................................................................................................CACA--ACCACTGCAGGATGTC..................................................................2011.00100100000000
...........................................................................................................................................................................................................................A----TTGTGTTCAGTCACAGTCC................................2011.00100100000000
...........................................................................................................................................................................ATC-----AACTCACCCACA--ACCACTGC..........................................................................2311.00100100000000
droEre2
AGCCCAACGAGCGCGGCGAT-CTGATCGCCTACCTGAAGTCGGCCACCAAGTAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.................GAT-CTGATCGCCTACCTGAAGTC..........................................................................................................................................................................................................................................23121.00214114560
..................AT-CTGATCGCCTACCTGAAGTCGGCCACC...................................................................................................................................................................................................................................29118.001801000017
.............................CTACCTGAAGTCGGCCACC...................................................................................................................................................................................................................................1918.0080602000
................CGAT-CTGATCGCCTACCTGAAGTCGGC.......................................................................................................................................................................................................................................2715.0050200210
.......CGAGCGCGGCGAT-CTGATCGCCTACC.................................................................................................................................................................................................................................................2615.0050000005
................CGAT-CTGATCGCCTACCTGAAGTC..........................................................................................................................................................................................................................................2415.0051111010
..................AT-CTGATCGCCTACCTGAAGTCGGCC......................................................................................................................................................................................................................................2615.0050000005
.................GAT-CTGATCGCCTACCTGAAGT...........................................................................................................................................................................................................................................2214.0040101110
.............................CTACCTGAAGTCGGCCACCAAGT...............................................................................................................................................................................................................................2314.0040012100
......ACGAGCGCGGCGAT-CTGATCGCCTACC.................................................................................................................................................................................................................................................2713.0030000120
AGCCCAACGAGCGCGGCGAT-CTGA..........................................................................................................................................................................................................................................................2413.0032000100
.................GAT-CTGATCGCCTACCTGAAGTCGGC.......................................................................................................................................................................................................................................2613.0031100010
............................CCTACCTGAAGTCGGCCACC...................................................................................................................................................................................................................................2013.0030200100
.....AACGAGCGCGGCGAT-CTGATCGCCTACC.................................................................................................................................................................................................................................................2812.0020000110
..................AT-CTGATCGCCTACCTGAAGTCGGC.......................................................................................................................................................................................................................................2512.0020011000
..................................TGAAGTCGGCCACCAAGTA..............................................................................................................................................................................................................................1912.0020000200
...................T-CTGATCGCCTACCTGAAGTCGGC.......................................................................................................................................................................................................................................2412.0020101000
.........AGCGCGGCGAT-CTGATCGCCTACC.................................................................................................................................................................................................................................................2412.0022000000
.................GAT-CTGATCGCCTACCTGAAGTCGGCC......................................................................................................................................................................................................................................2712.0020000110
...............GCGAT-CTGATCGCCTACCTGAAGTCGGC.......................................................................................................................................................................................................................................2812.0021100000
..................AT-CTGATCGCCTACCTGAAGTC..........................................................................................................................................................................................................................................2212.0020000020
.................GAT-CTGATCGCCTACCTGAAGTCGGCCA.....................................................................................................................................................................................................................................2811.0010000100
........GAGCGCGGCGAT-CTGATCGCCTACC.................................................................................................................................................................................................................................................2511.0011000000
.GCCCAACGAGCGCGGCGAT-C.............................................................................................................................................................................................................................................................2011.0011000000
...............................ACCTGAAGTCGGCCACCAAGT...............................................................................................................................................................................................................................2111.0010000010
AGCCCAACGAGCGCGGCGAT-CTG...........................................................................................................................................................................................................................................................2311.0011000000
........................ATCGCCTACCTGAAGTCGGC.......................................................................................................................................................................................................................................2011.0010001000
..........................CGCCTACCTGAAGTCGGCC......................................................................................................................................................................................................................................1911.0010100000
...............GCGAT-CTGATCGCCTACCTGAAGTCGGCC......................................................................................................................................................................................................................................2911.0011000000
.................GAT-CTGATCGCCTACCTGAAGTCG.........................................................................................................................................................................................................................................2411.0010001000
.....................CTGATCGCCTACCTGAAGTCGGCC......................................................................................................................................................................................................................................2411.0010100000
...................T-CTGATCGCCTACCTGAAGTCGGCC......................................................................................................................................................................................................................................2511.0010100000
AGCCCAACGAGCGCGGCGAT-CTGATCGC......................................................................................................................................................................................................................................................2811.0010100000
....CAACGAGCGCGGCGAT-CTGATC........................................................................................................................................................................................................................................................2211.0010000100
.......CGAGCGCGGCGAT-CTGATCG.......................................................................................................................................................................................................................................................2011.0010000010
..........................CGCCTACCTGAAGTCGGC.......................................................................................................................................................................................................................................1811.0010100000
....CAACGAGCGCGGCGAT-CTGATCGC......................................................................................................................................................................................................................................................2411.0010000010
.......................GATCGCCTACCTGAAGTCG.........................................................................................................................................................................................................................................1911.0011000000
..............GGCGAT-CTGATCGCCTACCTGAAGTCGGC.......................................................................................................................................................................................................................................2911.0010100000
.................GAT-CTGATCGCCTACCTGAAGTCGG........................................................................................................................................................................................................................................2511.0010000010
..........................CGCCTACCTGAAGTCGGCCACCAAGT...............................................................................................................................................................................................................................2611.0010100000
...........................GCCTACCTGAAGTCGGCCACCA..................................................................................................................................................................................................................................2211.0011000000
..............................TACCTGAAGTCGGCCACCA..................................................................................................................................................................................................................................1911.0011000000
..CCCAACGAGCGCGGCGAT-CTGA..........................................................................................................................................................................................................................................................2211.0011000000
.....AACGAGCGCGGCGAT-CTGA..........................................................................................................................................................................................................................................................1911.0011000000
.................GAT-CTGATCGCCTACCTGA..............................................................................................................................................................................................................................................1911.0010100000
......ACGAGCGCGGCGAT-CTGA..........................................................................................................................................................................................................................................................1811.0010000100
........................ATCGCCTACCTGAAGTCGGCCA.....................................................................................................................................................................................................................................2211.0010000100
...................................GAAGTCGGCCACCAAGTA..............................................................................................................................................................................................................................1811.0011000000
............GCGGCGAT-CTGATCGCCTACCTGAAGT...........................................................................................................................................................................................................................................2711.0011000000
..............................TACCTGAAGTCGGCCACCAAGT...............................................................................................................................................................................................................................2211.0011000000
AGCCCAACGAGCGCGGCGAT-..............................................................................................................................................................................................................................................................2011.0011000000
...........................GCCTACCTGAAGTCGGCCACC...................................................................................................................................................................................................................................2111.0010100000
................CGAT-CTGATCGCCTACCTGAAGTCGGCC......................................................................................................................................................................................................................................2811.0010000010
.GCCCAACGAGCGCGGCGAT-CTG...........................................................................................................................................................................................................................................................2211.0011000000

Generated: 06/08/2015 at 02:51 PM