ID:

dpe_543

 Coordinate:

scaffold_1:3144140-3144290 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-11.4 -11.3 -11.3

Flybase annnotation

exon [dper_GLEANR_20993:9]; CDS [Dper\GL18851-cds]; intron [Dper\GL18851-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TTTTGATAAGACTCTTAGACTCGTAAGTGCATCCGAACCGATCCGTCTTTGAAGGCAGCTTTAACCCGCATGTGCTATGAGAGATCTCTAACCGCATGACCCGATAAGTATTATGTGCCTGAAGAGTGACTATTGAATGAATGGCAATTGCTGCAATGCTCTACTGACTGTACCGCCTCCATCCAATTGTAATTTCTGTAGATCAAAAAACAACCGACTGTCGCCGCGGAACAGGAACTGCAGGAGGAGTC
*******************************************************************************......((((...(((((((...........))))))).....))))((.(((((.....)))))))...........((..(((.....)))..))..************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M021
embryo
 M042
female body
 V057
head
 V042
embryo
 V050
head
...............................................................................AGAGATCTCTAACCGCATGACCCGATAA................................................................................................................................................ 28 0 1 5.00 5 5 0 0 0 0
.............CTTAGACTCGTAAGTGCATC.......................................................................................................................................................................................................................... 20 0 1 4.00 4 4 0 0 0 0
................................................................................................................................................................................................................................CGCGGAACAGGAACTGCAGGAGG.... 23 0 1 2.00 2 2 0 0 0 0
................................................................................................................................................................CTACTGACTGTACCGCCT......................................................................... 18 0 1 2.00 2 2 0 0 0 0
..........................................................................CTATGAGAGATCTCTAACCGCATGACCC..................................................................................................................................................... 28 0 1 2.00 2 2 0 0 0 0
...............................................................................................................................................................................................................AAACAACCGACTGTCGCCGCGGAACAG................. 27 0 1 2.00 2 2 0 0 0 0
................................................................................................................................................................CTACTGACTGTGCCGCCTCCA...................................................................... 21 1 1 1.00 1 0 1 0 0 0
...........................................................................................................................................................................................................CAAAAAACAACCGACTGT.............................. 18 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................................................CAATGCTCTACTGACTGTACCGC........................................................................... 23 0 1 1.00 1 1 0 0 0 0
.....................................................................................................................CCTGAAGTGCGACTATTGAAT................................................................................................................. 21 2 1 1.00 1 0 0 0 0 1
..........................................................................................................................................................AATGCTCTACTGACTGTACCGCCT......................................................................... 24 0 1 1.00 1 1 0 0 0 0
..............................................................................GAGAGATCTCTAACCGCATGACCCGATAA................................................................................................................................................ 29 0 1 1.00 1 1 0 0 0 0
...............................................................................AGAGATCTCTAACCGCATGACCCGATA................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0
...............................................................................AGAGATCTCTAACCGCATGACCCGATAG................................................................................................................................................ 28 1 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................................................................CGCCGCGGAACAGGAACT............ 18 0 1 1.00 1 1 0 0 0 0
..........................................................................................................................................................AATGCTCTACTGACTGTACC............................................................................. 20 0 1 1.00 1 1 0 0 0 0
....................TCGTAAGTGCATCCGAACCGATCCGTC............................................................................................................................................................................................................ 27 0 1 1.00 1 0 1 0 0 0
.......................................................................................................................................................TGCAATGCTCTACTGACCGTACCGCCT......................................................................... 27 1 1 1.00 1 1 0 0 0 0
................................................................................................................................................................CTACTGACTGTACCGCCG......................................................................... 18 1 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................................................................CGCCGCGGAGCGGGAACTGCA......... 21 2 1 1.00 1 0 0 1 0 0
.........................................................................................................................................................................................................ATCAAAAAACAACCGACTGT.............................. 20 0 1 1.00 1 1 0 0 0 0
...........................................................................................................GTATTATGTGCCTGAAGAGTGACT........................................................................................................................ 24 0 1 1.00 1 0 0 0 1 0
.......................................................................GTGCTATGAGAGATCTCTAACC.............................................................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0
................................................TCGAAGGCAGGTTTAACGC........................................................................................................................................................................................ 19 3 19 0.05 1 0 0 1 0 0

Anti-sense strand reads

AAAACTATTCTGAGAATCTGAGCATTCACGTAGGCTTGGCTAGGCAGAAACTTCCGTCGAAATTGGGCGTACACGATACTCTCTAGAGATTGGCGTACTGGGCTATTCATAATACACGGACTTCTCACTGATAACTTACTTACCGTTAACGACGTTACGAGATGACTGACATGGCGGAGGTAGGTTAACATTAAAGACATCTAGTTTTTTGTTGGCTGACAGCGGCGCCTTGTCCTTGACGTCCTCCTCAG
*************************************************************************......((((...(((((((...........))))))).....))))((.(((((.....)))))))...........((..(((.....)))..))..******************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total V057
head
 V050
head
 M021
embryo
 V042
embryo
 M042
female body
......................................................................................................................................................GACGTTACGGGATGACGGAAAT............................................................................... 22 3 1 1.00 1 1 0 0 0 0
......................................................................................................................................................GACGTTACGGGATGGCTGAAAT............................................................................... 22 3 2 0.50 1 1 0 0 0 0
......................................................................................................................................................GACGTTACGCGATGACTTAAAT............................................................................... 22 3 4 0.50 2 2 0 0 0 0
.....................................................................................................................................................CGACGTTACGTGATGACTTAAAT............................................................................... 23 3 2 0.50 1 0 1 0 0 0
.....................................................ACGTCGACAGTGGGCGTACAC................................................................................................................................................................................. 21 3 3 0.33 1 1 0 0 0 0
.........................................................................................................................................................GTTACGAGATGACTGACT................................................................................ 18 1 5 0.20 1 0 0 0 1 0
.......................................................................................................................................................AGGTTACGAGATGACTGAC................................................................................. 19 1 5 0.20 1 0 0 1 0 0
......................................................................................................................................................GAAGTTACGAGATGGCTGA.................................................................................. 19 2 5 0.20 1 0 0 0 0 1
......................................................................................................................GACTTCTCGCAGATATCTTA................................................................................................................. 20 3 7 0.14 1 0 0 0 0 1
.........................................................................................................................................................GTTACGAGATCGCTGACTTGG............................................................................. 21 3 7 0.14 1 0 0 1 0 0
.........................................................................................................................................................GTTACGCCATGACTGACA................................................................................ 18 2 8 0.13 1 0 0 0 1 0
.........................................................................................................................................................ATTACGAGATGGCTGACA................................................................................ 18 2 20 0.05 1 0 0 0 1 0
..........................................................................................................................................................TTACGAGATGGCTGAACT............................................................................... 18 3 20 0.05 1 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_1:3144090-3144340 - dpe_543 T---TTTGATAAGACTCT--TAGACTCGTAAGTGCATCCGAA---CCGATCCGTCTTTGAAGGCAGCTTTA-ACCCGCATGT-GCT------------------ATGAGAGATCT---CTAACCGCATGA---CCCGATAAGTATT-------ATGTGCC--------TGAAGAGTGACTATTGAATGAATGGCAAT---------------TGCTGC--AATGCTCTACTGACTGTACCGCCTCCATCCAATTGTAAT--T-TCTGTAGATCAAAAAACAACCGACTGTCGCCGCGGAACAGGAACTGCAGGAGGAGTC
dp5 4_group3:1672940-1673190 - T---TTTGATAAGACTCT--TAGACTCGTAAGTGCATCCGAA---CCGATCCGTCTTTGAAGGCAGCTTTA-ACCCGCATGT-GCT------------------ATGAGAGATCT---CTAACCGCATGA---CCCGATAAGTATT-------ATGTGCC--------TGAAGAGTGACTATTGAATGAATGGCAAT---------------TGCTGC--AATGCTCTACTGACTGTACCGCCTCCATCCAATTGTAAT--T-TCTGTAGATCAAAAAACAACCGACTGTCGCCGCGGAACAGGAACTGCAGGAGGAGTC
droVir3 scaffold_12963:6587143-6587363 + TT--TATAATTTGC---T-GAGTAC---TTAGTGCAT--GTA---AT------------GAGGCAGCTGCA-AATCGCATGT-GAC------------------ATGACC-TAAC---CCAACTGCATGT---TCCGATAAGTATTCCACATAATATGCA--------TTGCGAT-A----GTGTA----------------GAATCTATAAAAGCGA-CAAGTCCACACTGAGAGT----------CCGCATTATGAT--T-TCTGTAGATAACTAAAC---CGCCTGGCAACGCTGTGCAGGAACTGACCGAGACCAA
droMoj3 scaffold_6500:25743547-25743762 + T---TGATATAAAA---T--CTGG------TATGCAT--GAT----AAAGC-ATGAT--AAGGCAGCTGCAAACCTGCATGTGCATGTG--------C-----TATG----AACA---CTAATTGCATGT---TCCGATAAGTATT-------AAATGCA--------TT----C-AGCAAATGGAA-AA-----TCTG--CTAAGCAATATTATTTC-AAAG-----------------------CTCGCATTATGAT--T-TCCATAGATCAAAAAGA---CACCCGTCAATGACGCAGCGGAACTCAATGAAGTCGT
droGri2 scaffold_15252:9801578-9801776 + T---TATTGAAATAT-GGTATATAC---TTAATGCAT--GAT----A-------------CGGCAGCCGTA-ATTCGCATGT-GCA------------------ATG----AACC---CTAACTGCATGT---ACCGATAAGTATA-----------GCA--------TTATAAG-AACTATCAAGCGAG------ATG--TTGACGGACA--------------------------AAAAAT--CTCCGAACTATAAT--T-TCTATAGATAACAAAGA---AGCCTGTCAACTCGGTGCAGGAGCTGAATGAAAC---
droAna3 scaffold_12943:1520276-1520539 + G---TAGAATAGGA---T--TAGAC---TAAGTGCAT--GAGCCGTCGAGTGATCCTTAGAGGCAACTATA-ACAAGCATGTTGATAT---------------TATGGCAGAGCG---CTAACTGCATGA---TCCGATAAGTATT-------ACCCGCATCAGAGAATGAAGGC-AACTACTGAATGGA-----ATTGATTATTTCCATGACATTCT-TAACGCTATACTGACTGTACCATC--CACCGTATTGTAAT--TTCCTATAGATCAAGAAAC---CAGCTGCTAACGGGGAACAAGAACTGCAAGAGGCTCC
droBip1 scf7180000396728:1681775-1682033 - G---TAGAATAGGA---C--TAGAC---TAAGTGCAT--GAGCCACCGAGCGATCCCTAGAGGCATCTATA-ACCAGCATGTTGAT------------------ATGGC--AGCG---CTAACTGCATGATCCTCCGATAAGTATT-------ACCCGCATTAGAGAATGAAGGC-AGCTACTGAATGGA-----ATGGAATATTTCCATTATATTATAAAAGGCTATACTG----ATCCATC--CATCGTATCATAAT--TTCCTATAGATCAAGAAAC---CTGCTGTTAACGGGGAACAAGAACTGCAAGAGGCTCC
droKik1 scf7180000302570:270833-271059 + G---CATGCTGAGC-----------------------------------TCCATCTACGCAGAT--------------ATATTAATATATATATATATATATAGACAGC--TGCA-TGTTAACTGCATGGTAATCCGATAAGTATT-------ATGTGCC--------TGAAGAA-TG---------GAA-----AACG--TATAACTATGATAATGC-CAAGGCTATGCTGACTGTTTCGCCCCTATTGTATTGTAACTATTTCTGTAGATCACCAAACCGCCAGCTGACAACGCCGTACAGGAGCTGCAGGAG-----
droFic1 scf7180000454115:580207-580441 - T----AGGATAAGC---C--------------CGCAT--GTA---AGAAACGATCTTCGAAGGTAGCTTTA-ACCAGCATGTAGAT-------------------TGAT--TGAG---CTAACCGCATGA---TTCGATAAGTATT-------ATGTGCC--------TGAAGAC-AACTGCTATATGGA-----GTTG--TGCAACTATGACAAAGC-AAAGGCTATTTTAACAGTATCGTC--CGTCGTATTGTAAT--TTTCTGTAGATCACGAAAC---CGGCTGTCCCCGCTGAACAGGAGCTGCAGGCAGTTGT
droEle1 scf7180000491028:1239176-1239428 + G---TAGGATTTAA---C--TAAGT---TAAGTGCAT--GCC---ATGAGCGAACTTCGTAG-CAAATTTA-ACGAGCATGTTGATATA--------TA--TGTATAGC--AGCG---CTAACTGCATGA---TCCGATAAGTATT-------ATGTGCC--------TGAAGAC-AGCTACTAAATGTA-----GTTG--TATAACTATGATAATGC-AAAGGCTATGTTGACTGTACCGCC--CATCGTATTGTAAT--TTTCTGTAGATCACGAAAC---CGACTGTCGCCGCTGAGCAGGAGCTGCAGGAAGTTGT
droRho1 scf7180000780001:15263-15509 - G---TAGGATATAA---C--TAAGC---TAAGTGCAT--GAA---AAGACCGATCTTCGTAG-CAAATCTA-ACGAGCATGTTGATAT----------------ATAGC--AGCA---CTAACTGCATGA---TCCGATAAGTATT-------ATGTGCC--------TGAATAC-AGCTACTGAATGTA-----GTTG--TATAACTATGATAATGC-AGAGGCTATGTTTACTGTACCGCC--CATCGTATTGTAAT--TTTCTGTAGATCACAAAAC---CGACTGACGCGGGTGAGCAGGACCTGCAGGAAGTTGT
droBia1 scf7180000302422:9524996-9525245 - T----AGAATACGC---C--TAGGC---TAAGTGCAT--GAA---GAGAGCTATTGTCAAAGACAGATATA-ACCAGCATGTTAATGAA-------------ATATGGC--AGCG---CTAACTGCATGA---TCCGATAAGTATT-------ATGTGCC--------TGGAGAC-AGCTACTGAATGAA-----GTTG--CTCAACTATGATAAAGC-AAAGTGTATGTTCACTGTACCGCC--CATCGTATTGTAAT--TTTCTGTAGATCACGAAAC---CGCCAGTCACCGCTGAGGAGGAGCTCAAGGAGGTTGT
droTak1 scf7180000415702:633711-633959 + T----AGAATAAGC---C--TAAGC---TAGGTGCAT--GAA---GAGAGCTATCGTCGAAGACAAACCTA-ACCAGCATGTTGATATA--------TA----TATGAT--AACG---CTAACTGCATGA---TCCGATAAGTATA-------ATGTGCC--------TGGACGC-AGCTACTGAATGGA-----GTTG--CTCAACTTTGTTAATGC-CAAGCGTATGCTCACTGTACCGCC--CATCGTATTGTAAT--TTTCTGTAGATCACGAAAC---CGGCTGTCACCGCTGAGGATGAGCTGAAGGAGGTT--
droEug1 scf7180000409463:964034-964285 + G---TAGGATAAGC---C--TAAGC---TAAGTGCAT--GAC---AAGAGCTATCGTCAATGGTAGATATA-ACCAGCATGTTGATATA--------TA----TATAGC--AGCG---CTAACTGCATGA---TCCGATAAGTATT-------ATGTGCC--------TGAAGAC-AGCAACTGAATGAA-----GTTT--TACGACTATGATATTGC-AAAGGCTATGTTCACTGTACCGCC--CATCGTATTGTAAT--TTTCTATAGATCACGAAAC---CGACCGTCACCGCTCAGCAGGAGCTCCAGGAGGTTGT
dm3 chr2L:7786378-7786631 - -------GATAAAC---C--TAGGC---TAAATGCAT--GAA----AGAATTATCGTCGGATACGTTTTTA-ACCAGCATGTTGATATA--------CATATACATAGC--AGCGCTGCTAACTGCATGA---TCCGATAAGTATT-------ATGTGCC--------TGAAGAC-AGCTACTGAATGAA-----GTTG--TTAACCTATGATAATGC-AAAGGCTATGTTCACTGTACCGCC--CATCGTATTGTAAT--TTTCTGTAGATCACGAAAC---AGACTGTCGCCGCTGAGGAAGAGCTGCAGGATGTTGT
droSim2 2l:7532359-7532609 - -------GATAAAC---C--TAGGC---TAAATGCAT--GAA----AGAGTTATCGTCGGAGACGTTTTTA-ACCAGCATGTTGATATA--------CATATACATAGC--AGCG---CTAACTGCATGA---TCCGATAAGTATT-------ATGTGCC--------TGAAGAC-AGCTACTGAATGAA-----GTTG--TAAACCTATGATAATGC-AAAGGCTATGTTCACTGTACCGCC--CATCGTATTGTAAT--TTTCTGTAGATCACGAAAC---AGACTGTCGCCGCTGAGGAAGAGCTGCAGGATGTTGT
droSec2 scaffold_3:3300759-3301009 - -------GATAAAC---C--TAGGC---TAAATGCAT--GAA----AGAGTTATCGTCGGAGACGTTTTTA-ACCAGCATGTTGATATA--------CATATACATAGC--AGCG---CTAACTGCATGA---TCCGATAAGTATT-------ATGTGCC--------TGAAGAC-AGCTACTGAATGAA-----GTTG--TAAACCTATGATAATGC-AAAGGCTATGTTCACTGTACCGCC--CATCGTATTGTAAT--TTTCTGTAGATCACGAAAC---AGACTGTCGCCGCTGAGGAAGAGCTGCAGGATGTTGT
droYak3 2L:5114705-5114954 + dya_233 TATATACGATAAAC---C--TAGGC---TAATCGCAT--GAA----AGAGTTATCGTCAGAGATGTTTTTA-ACCAGCATGTTGATAT----------------ATAGC--AGCC---CTAACTGCATGA---TCCGATAAGTATT-------ATGTGCC--------TGAAGAC-AGCTACTGAATGAA-----GTTG--TATACCTATGATAATGC-AACTGCTATGTTCACTGTACCGCC--CATCGTATTGTAAT--TTTCTGTAGATCACAAAAC---AGACTGTCGCCGCTGAGGAAGAGCTGCAGGATGTGGT
droEre2 scaffold_4929:16707413-16707657 - A---TACGATAAAC---C--TAGGC---TAAATGCAT--GA------GAGTTATCGTCAGAGACGATTTTA-ACCAGCATGTTGATAT----------------ATAGC--AGCC---CTAACTGCATGA---TCCGATAAGTATT-------ATGTGCC--------TGAAGAC-AGCTACTGAATGAA-----GTTG--TACGCCCACGATATTGC-AAAGGCTATGTTCACTGTACCGCC--CATCGTATTGTAAT--TTTCTGTAGATCACGAAAC---AGACTGTCACCGCTGAGGAAGAGCTGCAGGATGTTGT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
T---TTTGATAAGACTCT--TAGACTCGTAAGTGCATCCGAA---CCGATCCGTCTTTGAAGGCAGCTTTA-ACCCGCATGT-GCT------------------ATGAGAGATCT---CTAACCGCATGA---CCCGATAAGTATT-------ATGTGCC--------TGAAGAGTGACTATTGAATGAATGGCAAT---------------TGCTGC--AATGCTCTACTGACTGTACCGCCTCCATCCAATTGTAAT--T-TCTGTAGATCAAAAAACAACCGACTGTCGCCGCGGAACAGGAACTGCAGGAGGAGTCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...........................................................................................................AGAGATCT---CTAACCGCATGA---CCCGATAA...................................................................................................................................................................................2815.005500000
................CT--TAGACTCGTAAGTGCATC..........................................................................................................................................................................................................................................................................................2014.004400000
.....................................................................................................................................................................................................................................................................................................CGCGGAACAGGAACTGCAGGAGG....2312.002200000
..................................................................................................................................................................................................................................CTACTGACTGTACCGCCT............................................................................1812.002200000
....................................................................................CT------------------ATGAGAGATCT---CTAACCGCATGA---CCC........................................................................................................................................................................................2812.002200000
....................................................................................................................................................................................................................................................................................AAACAACCGACTGTCGCCGCGGAACAG.................2712.002200000
................................................................................................................................................................................................................................................................................CAAAAAACAACCGACTGT..............................1811.001100000
.........................................................................................................................................................................................................................C--AATGCTCTACTGACTGTACCGC..............................................................................2311.001100000
............................................................................................................................................................................................................................AATGCTCTACTGACTGTACCGCCT............................................................................2411.001100000
..........................................................................................................GAGAGATCT---CTAACCGCATGA---CCCGATAA...................................................................................................................................................................................2911.001100000
...........................................................................................................AGAGATCT---CTAACCGCATGA---CCCGATA....................................................................................................................................................................................2711.001100000
...........................................................................................................AGAGATCT---CTAACCGCATGA---CCCGATAG...................................................................................................................................................................................2811.001100000
..................................................................................................................................................................................................................................................................................................CGCCGCGGAACAGGAACT............1811.001100000
............................................................................................................................................................................................................................AATGCTCTACTGACTGTACC................................................................................2011.001100000
.........................TCGTAAGTGCATCCGAA---CCGATCCGTC.........................................................................................................................................................................................................................................................................2711.001010000
..................................................................................................................................................................................................................................CTACTGACTGTACCGCCG............................................................................1811.001100000
..............................................................................................................................................................................................................................................................................ATCAAAAAACAACCGACTGT..............................2011.001100000
.............................................................................................................................................GTATT-------ATGTGCC--------TGAAGAGTGACT............................................................................................................................................2411.001001000
................................................................................GT-GCT------------------ATGAGAGATCT---CTAACC....................................................................................................................................................................................................2211.001100000
dp5
T---TTTGATAAGACTCT--TAGACTCGTAAGTGCATCCGAA---CCGATCCGTCTTTGAAGGCAGCTTTA-ACCCGCATGT-GCT------------------ATGAGAGATCT---CTAACCGCATGA---CCCGATAAGTATT-------ATGTGCC--------TGAAGAGTGACTATTGAATGAATGGCAAT---------------TGCTGC--AATGCTCTACTGACTGTACCGCCTCCATCCAATTGTAAT--T-TCTGTAGATCAAAAAACAACCGACTGTCGCCGCGGAACAGGAACTGCAGGAGGAGTCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......................................................................................................................................................................................................................................................TCCAATTGTAAT--T-TCTGTAGATCAAAA...........................................2713.0030000000300
.........................................................................................................................................................................................................................................................................TGTAGATCAAAAAACAACCGACTGTC.............................2611.0010000000100
..................................................................................................................................................................................................AAT---------------TGCTGC--AATGCTCTACTG........................................................................................2111.0010100000000
.........................................................................................................................................................ATGTGCC--------TGAAGAGTGACTAT..........................................................................................................................................2111.0010000001000
...............................................................................................................................................ATT-------ATGTGCC--------TGAAGAGTGA..............................................................................................................................................2011.0010000100000
.................................................................................................................................................T-------ATGTGCC--------TGAAGAGTGACT............................................................................................................................................2011.0010000100000
........ATAAGACTCT--TAGACTCGTAAGTGC.............................................................................................................................................................................................................................................................................................2511.0010000100000
....................TAGACTCGTAAGTGCATCCGAA---CCGATCC............................................................................................................................................................................................................................................................................2911.0010010000000
..............................................................................................................................................................................GTGACTATTGAATGAATGGC..............................................................................................................................2011.0010100000000
........................CTCGTAAGTGCATCCGAA---CC.................................................................................................................................................................................................................................................................................2011.0010100000000
........................................................................................................................................................................................................................................................................................AACCGACTGTCGCCGCGGAAC...................2111.0010100000000
....................TAGACTCGTAAGTGCATCCGA.......................................................................................................................................................................................................................................................................................2111.0010100000000
..............................................................................................................................................................................................................................................................GTAAT--T-TCTGTAGATCAAAAAACAACC....................................2711.0010010000000
..............................................................................................................GATCT---CTAACCGCATGA---CCC........................................................................................................................................................................................2011.0010100000000
droVir3
TT--TATAATTTGC---T-GAGTAC---TTAGTGCAT--GTA---AT------------GAGGCAGCTGCA-AATCGCATGT-GAC------------------ATGACC-TAAC---CCAACTGCATGT---TCCGATAAGTATTCCACATAATATGCA--------TTGCGAT-A----GTGTA----------------GAATCTATAAAAGCGA-CAAGTCCACACTGAGAGT----------CCGCATTATGAT--T-TCTGTAGATAACTAAAC---CGCCTGGCAACGCTGTGCAGGAACTGACCGAGACCAASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..........................................................................TCGCATGT-GAC------------------ATGACC-TAAC---CCAACA....................................................................................................................................................................................................2711.001000000000000000000000000000000010000000000000000000000000000000
......................................................................................................................................................................................................................GCGA-CAAGTCCACACTGAGA.....................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................AC---CCAACTGCATGT---TCCG.......................................................................................................................................................................................1811.001000000000000000000000000000010000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................GATAACTAAAC---CGCCTGGCAACGCTGT.....................2711.001000100000000000000000000000000000000000000000000000000000000000
.......AATTTGC---T-GAGTAC---TTAGTGC.............................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
......................................................................A-AATCGCATGT-GAC------------------ATGACC-TAAC---CC........................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................ATAATATGCA--------TTGCGAT-A----GTGT.......................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................GT----------CCGCATTATGAT--T-TCTGTAGATAACTA...........................................2911.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
T---TGATATAAAA---T--CTGG------TATGCAT--GAT----AAAGC-ATGAT--AAGGCAGCTGCAAACCTGCATGTGCATGTG--------C-----TATG----AACA---CTAATTGCATGT---TCCGATAAGTATT-------AAATGCA--------TT----C-AGCAAATGGAA-AA-----TCTG--CTAAGCAATATTATTTC-AAAG-----------------------CTCGCATTATGAT--T-TCCATAGATCAAAAAGA---CACCCGTCAATGACGCAGCGGAACTCAATGAAGTCGTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
............................................................................................................................................................................................................................................................................................ACCCGTCAATGACGCAGCGGA...............2111.001100000
....................................................................................................................................................................................................................................................................................AAGA---CACCCGTCAATGACGCAGCGGAA..............2711.001100000
droGri2
T---TATTGAAATAT-GGTATATAC---TTAATGCAT--GAT----A-------------CGGCAGCCGTA-ATTCGCATGT-GCA------------------ATG----AACC---CTAACTGCATGT---ACCGATAAGTATA-----------GCA--------TTATAAG-AACTATCAAGCGAG------ATG--TTGACGGACA--------------------------AAAAAT--CTCCGAACTATAAT--T-TCTATAGATAACAAAGA---AGCCTGTCAACTCGGTGCAGGAGCTGAATGAAAC---SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
......................................................................................................................................................................................................................................................................................GA---AGCCTGTCAACTCGGTGCAGGAGC.............2611.00110
................................................................................................................................................................................................................................................................................................GTCAACTCGGTGCAGGAGCT............2011.00101
droAna3
G---TAGAATAGGA---T--TAGAC---TAAGTGCAT--GAGCCGTCGAGTGATCCTTAGAGGCAACTATA-ACAAGCATGTTGATAT---------------TATGGCAGAGCG---CTAACTGCATGA---TCCGATAAGTATT-------ACCCGCATCAGAGAATGAAGGC-AACTACTGAATGGA-----ATTGATTATTTCCATGACATTCT-TAACGCTATACTGACTGTACCATC--CACCGTATTGTAAT--TTCCTATAGATCAAGAAAC---CAGCTGCTAACGGGGAACAAGAACTGCAAGAGGCTCCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................................................................................................................................................................................................................TTCT-TAACGCTATACTGACTG....................................................................................2112.002200000
.........................................................................................................................................................................................................TATTTCCATGACATTCT-TAG..................................................................................................2011.001001000
.......................................................................................................................................................................................................................................GACTGTACCATC--CACCGTATT..................................................................2111.001010000
........................................................................................................................AACTGCATGA---TCCGATAAGTATT-------A......................................................................................................................................................................2411.001010000
................................................................................GTTGATAT---------------TATGGCAGAGCG---CTAACT....................................................................................................................................................................................................2611.001000001
................................................................................................................................GA---TCCGATAAGTATT-------ACCC...................................................................................................................................................................1911.001010000
......................GAC---TAAGTGCAT--GAGCCGTCGAGC.............................................................................................................................................................................................................................................................................2411.001010000
............................................................................................................................GCATGA---TCCGATAAGTATT-------ACCCGC.................................................................................................................................................................2511.001010000
droBip1
G---TAGAATAGGA---C--TAGAC---TAAGTGCAT--GAGCCACCGAGCGATCCCTAGAGGCATCTATA-ACCAGCATGTTGAT------------------ATGGC--AGCG---CTAACTGCATGATCCTCCGATAAGTATT-------ACCCGCATTAGAGAATGAAGGC-AGCTACTGAATGGA-----ATGGAATATTTCCATTATATTATAAAAGGCTATACTG----ATCCATC--CATCGTATCATAAT--TTCCTATAGATCAAGAAAC---CTGCTGTTAACGGGGAACAAGAACTGCAAGAGGCTCCSizeHit CountTotal NormTotal
No Reads
droKik1
G---CATGCTGAGC-----------------------------------TCCATCTACGCAGAT--------------ATATTAATATATATATATATATATAGACAGC--TGCA-TGTTAACTGCATGGTAATCCGATAAGTATT-------ATGTGCC--------TGAAGAA-TG---------GAA-----AACG--TATAACTATGATAATGC-CAAGGCTATGCTGACTGTTTCGCCCCTATTGTATTGTAACTATTTCTGTAGATCACCAAACCGCCAGCTGACAACGCCGTACAGGAGCTGCAGGAG-----SizeHit CountTotal NormTotal
No Reads
droFic1
T----AGGATAAGC---C--------------CGCAT--GTA---AGAAACGATCTTCGAAGGTAGCTTTA-ACCAGCATGTAGAT-------------------TGAT--TGAG---CTAACCGCATGA---TTCGATAAGTATT-------ATGTGCC--------TGAAGAC-AACTGCTATATGGA-----GTTG--TGCAACTATGACAAAGC-AAAGGCTATTTTAACAGTATCGTC--CGTCGTATTGTAAT--TTTCTGTAGATCACGAAAC---CGGCTGTCCCCGCTGAACAGGAGCTGCAGGCAGTTGTSizeHit CountTotal NormTotal
No Reads
droEle1
G---TAGGATTTAA---C--TAAGT---TAAGTGCAT--GCC---ATGAGCGAACTTCGTAG-CAAATTTA-ACGAGCATGTTGATATA--------TA--TGTATAGC--AGCG---CTAACTGCATGA---TCCGATAAGTATT-------ATGTGCC--------TGAAGAC-AGCTACTAAATGTA-----GTTG--TATAACTATGATAATGC-AAAGGCTATGTTGACTGTACCGCC--CATCGTATTGTAAT--TTTCTGTAGATCACGAAAC---CGACTGTCGCCGCTGAGCAGGAGCTGCAGGAAGTTGTSizeHit CountTotal NormTotal
No Reads
droRho1
G---TAGGATATAA---C--TAAGC---TAAGTGCAT--GAA---AAGACCGATCTTCGTAG-CAAATCTA-ACGAGCATGTTGATAT----------------ATAGC--AGCA---CTAACTGCATGA---TCCGATAAGTATT-------ATGTGCC--------TGAATAC-AGCTACTGAATGTA-----GTTG--TATAACTATGATAATGC-AGAGGCTATGTTTACTGTACCGCC--CATCGTATTGTAAT--TTTCTGTAGATCACAAAAC---CGACTGACGCGGGTGAGCAGGACCTGCAGGAAGTTGTSizeHit CountTotal NormTotal
No Reads
droBia1
T----AGAATACGC---C--TAGGC---TAAGTGCAT--GAA---GAGAGCTATTGTCAAAGACAGATATA-ACCAGCATGTTAATGAA-------------ATATGGC--AGCG---CTAACTGCATGA---TCCGATAAGTATT-------ATGTGCC--------TGGAGAC-AGCTACTGAATGAA-----GTTG--CTCAACTATGATAAAGC-AAAGTGTATGTTCACTGTACCGCC--CATCGTATTGTAAT--TTTCTGTAGATCACGAAAC---CGCCAGTCACCGCTGAGGAGGAGCTCAAGGAGGTTGTSizeHit CountTotal NormTotal
No Reads
droTak1
T----AGAATAAGC---C--TAAGC---TAGGTGCAT--GAA---GAGAGCTATCGTCGAAGACAAACCTA-ACCAGCATGTTGATATA--------TA----TATGAT--AACG---CTAACTGCATGA---TCCGATAAGTATA-------ATGTGCC--------TGGACGC-AGCTACTGAATGGA-----GTTG--CTCAACTTTGTTAATGC-CAAGCGTATGCTCACTGTACCGCC--CATCGTATTGTAAT--TTTCTGTAGATCACGAAAC---CGGCTGTCACCGCTGAGGATGAGCTGAAGGAGGTT--SizeHit CountTotal NormTotal
No Reads
droEug1
G---TAGGATAAGC---C--TAAGC---TAAGTGCAT--GAC---AAGAGCTATCGTCAATGGTAGATATA-ACCAGCATGTTGATATA--------TA----TATAGC--AGCG---CTAACTGCATGA---TCCGATAAGTATT-------ATGTGCC--------TGAAGAC-AGCAACTGAATGAA-----GTTT--TACGACTATGATATTGC-AAAGGCTATGTTCACTGTACCGCC--CATCGTATTGTAAT--TTTCTATAGATCACGAAAC---CGACCGTCACCGCTCAGCAGGAGCTCCAGGAGGTTGTSizeHit CountTotal NormTotal
No Reads
dm3
-------GATAAAC---C--TAGGC---TAAATGCAT--GAA----AGAATTATCGTCGGATACGTTTTTA-ACCAGCATGTTGATATA--------CATATACATAGC--AGCGCTGCTAACTGCATGA---TCCGATAAGTATT-------ATGTGCC--------TGAAGAC-AGCTACTGAATGAA-----GTTG--TTAACCTATGATAATGC-AAAGGCTATGTTCACTGTACCGCC--CATCGTATTGTAAT--TTTCTGTAGATCACGAAAC---AGACTGTCGCCGCTGAGGAAGAGCTGCAGGATGTTGTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....................TAGGC---TAAATGCAT--GAA----AGAATTATC.........................................................................................................................................................................................................................................................................2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................TAAGTATT-------ATGTGCC--------TGAAGAC-AGC.............................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................TGAAGAC-AGCTACTGAATGAA-----GTTG--T......................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................AC-AGCTACTGAATGAA-----GT...........................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................TGTCGCCGCTGAGGAAGAGCTGCAG........2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000010000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................TAGATCACGAAAC---AGACTGT..............................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................AC---AGACTGTCGCCGCTGAGGAAGAGCT............2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000100000000000000000000000
............................................................................................................................................................................................................................................................................................GACTGTCGCCGCTGAGGAA.................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
............................TAAATGCAT--GAA----AGAATTATCGTCGGA...................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................CGATAAGTATT-------ATGTGCC--------TGA.....................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................T--GAA----AGAATTATCGTCGGATACGTT.............................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
..............................................................................................................................................................................C-AGCTACTGAATGAA-----GTTG--T......................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................TCCGATAAGTATT-------ATGTGCC--------TGAAGAC-A...............................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................C-AGCTACTGAATGAA-----GTT..........................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................TGATAATGC-AAAGGCTATGTTCACTGT...................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................ATACGTTTTTA-ACCAGCATGT..............................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..............................................AGAATTATCGTCGGATACGTT.............................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................CTGTCGCCGCTGAGGAAGAGC.............2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................AAC---AGACTGTCGCCGCTGAGGAAGAGC.............2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000
.......................................................................................................................................................................................................................TGC-AAAGGCTATGTTCACTGTACCGCC--...........................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................AGCGCTGCTAACTGCATGA---TC.........................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
..............................................................................................................................................TATT-------ATGTGCC--------TGAAGAC-AGCT............................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................TCACGAAAC---AGACTGTCGCCGCTGAGGA..................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................AATGCAT--GAA----AGAATTATCGTC......................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
................................................................................................................................................TT-------ATGTGCC--------TGAAGAC-AGC.............................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................TGTCGCCGCTGAGGAAGAGCTGC..........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................TATCGTCGGATACGTTTTTA-ACCAGC..................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................CGCTGCTAACTGCATGA---TCCGATAAG..................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................CACGAAAC---AGACTGTCGCCGCTGAGGA..................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
............................................................................................................................................................................GAC-AGCTACTGAATGAA-----G............................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................GCAT--GAA----AGAATTATCGTCGGC...................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
......................................................................................................................................................................................................................ATGC-AAAGGCTATGTTCACTG....................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................CTGAGGAAGAGCTGCAGGATG....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..............................................................................................................................................TATT-------ATGTGCC--------TGAAGAC-A...............................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................C-AAAGGCTATGTTCACTGTAC.................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.....................................................................................................TACATAGC--AGCGCTGCTAACTGCA.................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................TACGTTTTTA-ACCAGCATGT..............................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................AAC---AGACTGTCGCCGCTGAGGAAGA...............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
..........................................................................................................................................................................................................................................................................GTAGATCACGAAAC---AGACTGTCGCCGC........................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................GATCACGAAAC---AGACTGTCGCCG.........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
......................................................................................................................................................................................................................................................................................AC---AGACTGTCGCCGCTGAGGAAGAGC.............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................CACTGTACCGCC--CATCGT.....................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................TGCC--------TGAAGAC-AGCTACTGAATGAA-----.............................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
...............................................................................................................................................ATT-------ATGTGCC--------TGAAGAC-AGCT............................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.......................................................................................................................................................................................................................TGC-AAAGGCTATGTTCACTGT...................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................TTTTTA-ACCAGCATGTTGATA.........................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.....................................................................................................................................................................................................................................................................................AAC---AGACTGTCGCCGCTGAGGAAG................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................TATT-------ATGTGCC--------TGAAGAC-AGCTAC..........................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................GACTGTCGCCGCTGAGGAAGAGCTGCA.........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................AGACTGTCGCCGCTGAGGAAGAGCT............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................AGAC-AGCTACTGAATGAA-----G............................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................ACTGCATGA---TCCGATAAGTAT...............................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................GAA----AGAATTATCGTCGGATACGTT.............................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................ATATA--------CATATACATAGC--AGCG.............................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................GCCGCTGAGGAAGAGCTGCAGGATGTTGT2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................AAATGCAT--GAA----AGAATTATCGTCGGA...................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................TAATGC-AAAGGCTATGTTCACTGTACC................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................AT--GAA----AGAATTATCGTCGG....................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................TGAATGAA-----GTTG--TTAACCTATGATAA.........................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................TCACGAAAC---AGACTGTCGCCGCTGA.....................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................GACTGTCGCCGCTGAGGAAGAGC.............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................TCGGATACGTTTTTA-ACCAGCATGTT.............................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................TGAATGAA-----GTTG--TTAACCTA...............................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
........ATAAAC---C--TAGGC---TAAATGCAT--.........................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................C--------TGAAGAC-AGCTACTGAATGAA-----GT...........................................................................................................................2411.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................CGCC--CATCGTATTGTAAT--T..........................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................GATAAGTATT-------ATGTGCC--------TGAA....................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................GACTGTCGCCGCTGAGGAAGA...............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
................................................................................................................................................................................................................................................................................................GTCGCCGCTGAGGAAGAGC.............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.........................................................................................................TAGC--AGCGCTGCTAACTGCATGA---TCCG.......................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................TTCACTGTACCGCC--CATCGTA....................................................................2111.0010000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................T--GAA----AGAATTATCGTCGGATACGTTT............................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................TGTCGCCGCTGAGGAAGAGC.............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................GCCGCTGAGGAAGAGCTGCAGGATG....2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................AC-AGCTACTGAATGAA-----GTTG--.......................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................ATAGC--AGCGCTGCTAACTGCAT................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................TAACTGCATGA---TCCGATAAGTATT-------A......................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................TGCATGA---TCCGATAAGTATT-------ATG....................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................TGTAGATCACGAAAC---AGACTGTCGCCG.........................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................TCACGAAAC---AGACTGTCGCCGCTG......................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TAAAC---C--TAGGC---TAAATGCAT--GAA----AGAA..............................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................TAATGC-AAAGGCTATGTTCACTGT...................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................GTCGCCGCTGAGGAAGAGCTG...........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
........................................................................................................................................................................TGAAGAC-AGCTACTGAATGAA-----G............................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
...................................................................................................................................................................................................................ATAATGC-AAAGGCTATGTTCACTGT...................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................C---AGACTGTCGCCGCTGAGGAA.................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................CAT--GAA----AGAATTATCGTCGGA...................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................AAC---AGACTGTCGCCGCTGAGGAAGAG..............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.......................................................................................................................................................................................................................................................................................................CTGAGGAAGAGCTGCAGGATGTTGT2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
...........................................................................................................................................................................................................................................................................TAGATCACGAAAC---AGACTGTCGCCGC........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................TATTGTAAT--TTTCTGTAGATCACGAAAC---.....................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................TT-------ATGTGCC--------TGAAGAC-AGCTACTGAA......................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
-------GATAAAC---C--TAGGC---TAAATGCAT--GAA----AGAGTTATCGTCGGAGACGTTTTTA-ACCAGCATGTTGATATA--------CATATACATAGC--AGCG---CTAACTGCATGA---TCCGATAAGTATT-------ATGTGCC--------TGAAGAC-AGCTACTGAATGAA-----GTTG--TAAACCTATGATAATGC-AAAGGCTATGTTCACTGTACCGCC--CATCGTATTGTAAT--TTTCTGTAGATCACGAAAC---AGACTGTCGCCGCTGAGGAAGAGCTGCAGGATGTTGTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................TGCAT--GAA----AGAGTTATCGTCGGAGACGTT.............................................................................................................................................................................................................................................................2914.00400000012100000000
............................................................................................................................................................................................................................................................................AGATCACGAAAC---AGACTGTC.............................2013.00300300000000000000
...........................................................................................................................................................................................................................................................ATTGTAAT--TTTCTGTAGAT................................................1912.00200200000000000000
.......................................................................................................................TAACTGCATGA---TCCGATAAGTATT-------A......................................................................................................................................................................2512.00200000001000001000
.........................................................................................................................................................................................................................................................................TGTAGATCACGAAAC---AGACTGTCG............................2412.00200000000000002000
........................................................................................................................................................................................................................................................................CTGTAGATCACGAAAC---AGACT................................2112.00211000000000000000
....................................................................................................................................................................................................................................................................................AAAC---AGACTGTCGCCGCTG......................1912.00200200000000000000
...............................................................................................................................................ATT-------ATGTGCC--------TGAAGAC-A...............................................................................................................................................1812.00200200000000000000
......................................................................................................................................................................................................................................................................TTCTGTAGATCACGAAAC---AGACT................................2312.00200200000000000000
.................................................................................................................................................................................................................................................CC--CATCGTATTGTAAT--TTTCTGTAGA.................................................2612.00200000002000000000
..............................................................................................................................................TATT-------ATGTGCC--------TGAAGAC-................................................................................................................................................1812.00200200000000000000
...............................................................................................................................................................................................................................................................................TCACGAAAC---AGACTGTCGCCGCTGAGGAA.................2911.00100000001000000000
.....................................................................................................................................................................................................................................................................................AAC---AGACTGTCGCCGCTGAGGAA.................2311.00100000000010000000
........................C---TAAATGCAT--GAA----AGAGTTATCGTC......................................................................................................................................................................................................................................................................2511.00100010000000000000
......................................................................................................................................................................................................................................................................................AC---AGACTGTCGCCGCTGAGGAAGA...............2411.00100100000000000000
...........................................................................................................................................................................................................................................................................TAGATCACGAAAC---AGACTGTCGCCGC........................2611.00100000001000000000
................................................................................................................................................................................................................................CTATGTTCACTGTACCGCC--T..........................................................................2011.00110000000000000000
..............................................................................................................................................................................................................................................................................ATCACGAAAC---AGACTGTC.............................1811.00100100000000000000
.................................................................................................................................................................................GCTACTGAATGAA-----GTTG--TAAACCTATG.............................................................................................................2711.00100010000000000000
.....................................................................................................................................................................................................................................................................................AAC---AGACTGTCGCCGCTGAGGAAGAGC.............2711.00100000010000000000
.............................................................................................................................................................GCC--------TGAAGAC-AGCTAC..........................................................................................................................................1611.00100000000001000000
......................................................................................................................................................................................................................ATGC-AAAGGCTATGTTCACTGTACCGCC--...........................................................................2811.00100010000000000000
................................................................................................................................................................................................................................................................AAT--TTTCTGTAGATCACGAAAC---AGACT................................2711.00100100000000000000
........................C---TAAATGCAT--GAA----AGAGTTATCGT.......................................................................................................................................................................................................................................................................2411.00101000000000000000
............................TAAATGCAT--GAA----AGAGTTATCGTCG.....................................................................................................................................................................................................................................................................2511.00100000000000001000
............................................................................................................................................................................................................................AAGGCTATGTTCACTGTACCGCC--CATCGT.....................................................................2911.00100000001000000000
....................................T--GAA----AGAGTTATCGTCGGAGAT................................................................................................................................................................................................................................................................2211.00100000000000001000
........................................................................................................................................................................TGAAGAC-AGCTACTGAATGAA-----GTTG--TA.....................................................................................................................2711.00100000000001000000
............................................................................................................................................................TGCC--------TGAAGAC-AGCTACTGAATGAA-----GTT..........................................................................................................................2811.00100010000000000000
............................................................................................................................................................................................................................................................................AGATCACGAAAC---AGACTGTCGCCGCT.......................2611.00100010000000000000
......................................................................................................................................................................................................................................................................................AC---AGACTGTCGCCGCTGAGG...................2011.00110000000000000000
...................................................................................GATATA--------CATATACATAGC--AGCG---CTAAC.....................................................................................................................................................................................................2711.00100010000000000000
.........................................................................................................................ACTGCATGA---TCCGATAAGTATT-------A......................................................................................................................................................................2311.00100000001000000000
.........................................................................................................................................................................................................................................................................TGTAGATCACGAAAC---AGACTGTCGCCG.........................2711.00100000000000001000
.................................GCAT--GAA----AGAGTTATCGTCGGAGACGT..............................................................................................................................................................................................................................................................2711.00101000000000000000
..........................................................................................................................................................TGTGCC--------TGAAGAC-AGCTACTGAATGAA-----.............................................................................................................................2711.00100000000000001000
................................................................................................................................................TT-------ATGTGCC--------TGAAGAC-AGCTACTGAA......................................................................................................................................2611.00100000001000000000
....................................T--GAA----AGAGTTATCGTCGGAGACGTT.............................................................................................................................................................................................................................................................2511.00100000010000000000
................................TGCAT--GAA----AGAGTTATCGTCGGAGACGT..............................................................................................................................................................................................................................................................2811.00100000001000000000
...........................................................................................................................................................................................................................AAAGGCTATGTTCACTGTACCGCC--CATC.......................................................................2811.00100010000000000000
.......................................................................................................................................................................................................................TGC-AAAGGCTATGTTCACTGTACCGCC--...........................................................................2711.00100010000000000000
........................................................................................................................................................................TGAAGAC-AGCTACTGAATGAA-----GT...........................................................................................................................2311.00100000010000000000
...................................................................................................................................................................................TACTGAATGAA-----GTTG--TAAACCTATG.............................................................................................................2511.00100000000000001000
...............................................................................................................................................................................................................................................................................TCACGAAAC---AGACTGTCGCCGCTGA.....................2511.00100000000010000000
........................................................................................................................................................................................................................GC-AAAGGCTATGTTCACT.....................................................................................1811.00100100000000000000
droSec2
-------GATAAAC---C--TAGGC---TAAATGCAT--GAA----AGAGTTATCGTCGGAGACGTTTTTA-ACCAGCATGTTGATATA--------CATATACATAGC--AGCG---CTAACTGCATGA---TCCGATAAGTATT-------ATGTGCC--------TGAAGAC-AGCTACTGAATGAA-----GTTG--TAAACCTATGATAATGC-AAAGGCTATGTTCACTGTACCGCC--CATCGTATTGTAAT--TTTCTGTAGATCACGAAAC---AGACTGTCGCCGCTGAGGAAGAGCTGCAGGATGTTGTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................................................................................................................................ATT-------ATGTGCC--------TGAAGAC-AGCT............................................................................................................................................2111.0010010
...............................................................................................................................................ATT-------ATGTGCC--------TGAAGAC-AG..............................................................................................................................................1911.0010010
........................................................................................................................AACTGCATGA---TCCGATAAGT.................................................................................................................................................................................2011.0010010
.............................................................................................................................................GTATT-------ATGTGCC--------TGAAGAC-A...............................................................................................................................................2011.0010010
....................................................................................................ATACATAGC--AGCG---CTAACTGC..................................................................................................................................................................................................2111.0010010
...............................................................................................................................................ATT-------ATGTGCC--------TGAAGAC-AGCTA...........................................................................................................................................2211.0010010
...................................................TATCGTCGGAGACGTTTTTA-ACCAGC..................................................................................................................................................................................................................................................2611.0010010
.....................AGGC---TAAATGCAT--GAA----AGAGTTATCG........................................................................................................................................................................................................................................................................2611.0010100
...........................................................................................................................................................................................................................................................................................AGACTGTCGCCGCTGAGGA..................1911.0010010
...................................................................................................................................................................................................................................................................................................GCCGCTGAGGAAGAGCTGCAGGATGT...2611.0010010
...................................................................................................................................................................................................................ATAATGC-AAAGGCTATGTTCACT.....................................................................................2311.0010010
................................................................................................................................................................................................................................................................................................GTCGCCGCTGAGGAAGAGCTGCAGGAT.....2711.0010010
.........................................................................................................................................................................GAAGAC-AGCTACTGAATGAA-----GTT..........................................................................................................................2311.0010010
...................................................................................................................................................................................................................ATAATGC-AAAGGCTATGTT.........................................................................................1911.0010010
...............................................................................................................AGCG---CTAACTGCATGA---TCCGATAAG..................................................................................................................................................................................2511.0010010
droYak3
TATATACGATAAAC---C--TAGGC---TAATCGCAT--GAA----AGAGTTATCGTCAGAGATGTTTTTA-ACCAGCATGTTGATAT----------------ATAGC--AGCC---CTAACTGCATGA---TCCGATAAGTATT-------ATGTGCC--------TGAAGAC-AGCTACTGAATGAA-----GTTG--TATACCTATGATAATGC-AACTGCTATGTTCACTGTACCGCC--CATCGTATTGTAAT--TTTCTGTAGATCACAAAAC---AGACTGTCGCCGCTGAGGAAGAGCTGCAGGATGTGGTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........................................................................................................................................................................................................................................TGTACCGCC--CATCGTATTG.................................................................1911.00110000000000
.......................................GAA----AGAGTTATCGTCAGAGATG...............................................................................................................................................................................................................................................................2211.00101000000000
..............................ATCGCAT--GAA----AGAGTTATCGTCAGA...................................................................................................................................................................................................................................................................2511.00100000010000
.......................................................................................................................................................................................................................TGC-AACTGCTATGTTCACT.....................................................................................1911.00100100000000
..............................................................................................................................................................................................................................................................................ATCACAAAAC---AGACTGTCGC...........................2011.00100000010000
......................GGC---TAATCGCAT--GAA----AGAGTT............................................................................................................................................................................................................................................................................2111.00100100000000
........................................................................................................................................................................................................................................................................CTGTAGATCACAAAAC---AGACT................................2111.00100100000000
.............................................................................................................................................................................................................................CTGCTATGTTCACTGTACCGCC--...........................................................................2211.00110000000000
...............................................................................................................................................................C--------TGAAGAC-AGCTACTGAATGAA-----GTTG--C......................................................................................................................2711.00100100000000
............AC---C--TAGGC---TAATCGCAT--GAA----AGA...............................................................................................................................................................................................................................................................................2311.00100000010000
................................................................................................................................GA---TCCGATAAGTATT-------ATGT...................................................................................................................................................................1911.00101000000000
.......................................GAA----AGAGTTATCGTCAGAGATGTTTTT..........................................................................................................................................................................................................................................................2711.00100000010000
...............................................................................................................................................ATT-------ATGTGCC--------TGAAGAC-AGCTACT.........................................................................................................................................2411.00101000000000
.............................................................................................................................................................................................................................................................................................................AAGAGCTGCAGGATGTGGT1911.00100000010000
.............................................................................................................................................................................................................................................................................GATCACAAAAC---AGACTGTCGC...........................2111.00100000010000
...............................................................................................................................................ATT-------ATGTGCC--------TGAAGAC-AGCT............................................................................................................................................2111.00100010000000
.........................................................................................................................................................................GAAGAC-AGCTACTGAATGAA-----GT...........................................................................................................................2211.00100100000000
...............................................................................................................AGCC---CTAACTGCATGA---TC.........................................................................................................................................................................................1811.00100100000000
droEre2
A---TACGATAAAC---C--TAGGC---TAAATGCAT--GA------GAGTTATCGTCAGAGACGATTTTA-ACCAGCATGTTGATAT----------------ATAGC--AGCC---CTAACTGCATGA---TCCGATAAGTATT-------ATGTGCC--------TGAAGAC-AGCTACTGAATGAA-----GTTG--TACGCCCACGATATTGC-AAAGGCTATGTTCACTGTACCGCC--CATCGTATTGTAAT--TTTCTGTAGATCACGAAAC---AGACTGTCACCGCTGAGGAAGAGCTGCAGGATGTTGTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....................................................................................................................................TCCGATAAGTATT-------ATGTGCC--------TGAAGAC-AGC.............................................................................................................................................3013.0030000003
.................................................................................................................................................T-------ATGTGCC--------TGAAGAC-AGCTACTGA.......................................................................................................................................2411.0010001000
......................................................CGTCAGAGACGATTTTA-ACCAGCATGTTG............................................................................................................................................................................................................................................2911.0010001000
...............................................GAGTTATCGTCAGAGACGATTTTA-........................................................................................................................................................................................................................................................2411.0010000100
....................TAGGC---TAAATGCAT--GA------GAGTTATCG........................................................................................................................................................................................................................................................................2511.0011000000
...........................................................................................................................................................................................................................................GTACCGCC--CATCGTATTGTA...............................................................2011.0010100000
......................................................................................................................................................................................................................................................ATCGTATTGTAAT--TTTCTGTA...................................................2111.0010000010
.....................AGGC---TAAATGCAT--GA------GAGTT............................................................................................................................................................................................................................................................................2011.0010100000
.........................................................................................................................................................................................................................C-AAAGGCTATGTTCACTGTACC................................................................................2211.0010100000
.........................................................................................................................................................................GAAGAC-AGCTACTGAATGA...................................................................................................................................1911.0010001000
............................................................................................................................................................................................................................................TACCGCC--CATCGTATTGTAAT--TTTC.......................................................2511.0011000000
..............................................................................................................................................................................................................CCACGATATTGC-AAAGGCTAT............................................................................................2111.0010001000
...............................................................................................................AGCC---CTAACTGCATGA---TCCGATAAGT.................................................................................................................................................................................2611.0010000100

Generated: 06/08/2015 at 02:49 PM