ID:

dpe_533

 Coordinate:

scaffold_1:2393236-2393386 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-8.6 -8.5 -8.5 -8.4

Flybase annnotation

exon [dper_GLEANR_21381:2]; CDS [Dper\GL19239-cds]; intron [Dper\GL19239-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AGAGCCGAAAGAAATTTGTCATCGTCATTGCCTCGCTTACAATTGTTCAAATAAACAGTGCCAGCGCTCGCCAGCACGATAACAGACACCGAAAAATCATTCCACTAATTGCTTTTCGACTGCATACGTAGTCAAAATATTACCAAATAAAAAAATAAGCTGTGATTTCGTAGACTTATTGATTTTTCCCTCGATTTGCAGGCTGGCAAAATGAAGAAGGAGAAAAAGGAGAAGCCGGCCGGTGCTGCCGG
*******************************************************************************************************..............((.....((((..((((.....(((.............)))....))))..))))...))************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M021
embryo
 V042
embryo
 M042
female body
 V111
male body
.............................................................................................................................................................................................................GCAAAATGAAGAAGGAGAAAAAGGA..................... 25 0 1 4.00 4 3 0 0 1
..........................................................................................................................................................ATAAGCTGTGATTTCGTAGACTT.......................................................................... 23 0 1 3.00 3 3 0 0 0
....................................................................................................................................................................ATTTCGTAGACTTATTGATTTTTCCCT............................................................ 27 0 1 2.00 2 2 0 0 0
.......................................................................................................ACTAATTGCTTTTCGACTGC................................................................................................................................ 20 0 1 2.00 2 2 0 0 0
......GAAAGAAATTTGTCATCGTC................................................................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0
.................................................................................................................TTTCGACTGCATACGTAGT....................................................................................................................... 19 0 1 1.00 1 0 1 0 0
.........................................................................................................................................................AATAAGCTGTGATTTCGTAGACT........................................................................... 23 0 1 1.00 1 1 0 0 0
....................................................................................................................................................................................................................GAAGAAGGAGAAGAAGGAGAAGTC............... 24 2 1 1.00 1 0 0 1 0
............................................................................................................................................................................................................................AGAAAAAGGAGAAGCCGGC............ 19 0 1 1.00 1 0 0 1 0
...........................................................................................................................................................................GGACTTATTGATTTTTCCCTC........................................................... 21 1 1 1.00 1 0 0 1 0
.........................................................................................................................................................................GTAGACTTATTGATTTTTCCCC............................................................ 22 1 1 1.00 1 1 0 0 0
..................................................................................................................................................................................................................................AGGAGAAGCCGGCCGGTGCTGCC.. 23 0 1 1.00 1 0 1 0 0
..........................................................................................................................................................................................................................GGAGAAAAAGGAGAAGCCGGCCGGTG....... 26 0 1 1.00 1 1 0 0 0
...................................................................................................................................................................GATTTCGTAGACTTATTGATT................................................................... 21 0 1 1.00 1 0 1 0 0
......................................................................................................................................................................................................................................GAAGCCGGCCGGTGCTGCC.. 19 0 1 1.00 1 0 1 0 0
.........................................................................................................................................................................GTAGACTTATTGATTTTTCCCT............................................................ 22 0 1 1.00 1 1 0 0 0
..............TTTGTCATCGTCATTGCCT.......................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0
..............................................................................................................GCTTTTCGACTGCATACGTAGT....................................................................................................................... 22 0 1 1.00 1 0 1 0 0
..............TTTGTCATCGTCATTGCCG.......................................................................................................................................................................................................................... 19 1 2 0.50 1 1 0 0 0
...........................................................................................................................................................................................................................GAGAAAAAGGAGAAGCAGGA............ 20 2 20 0.10 2 0 0 0 2
.....................................................................................................................................................................................................................AAGAAGGAGAAGAAGGAGAAGTCA.............. 24 3 13 0.08 1 0 0 0 1

Anti-sense strand reads

TCTCGGCTTTCTTTAAACAGTAGCAGTAACGGAGCGAATGTTAACAAGTTTATTTGTCACGGTCGCGAGCGGTCGTGCTATTGTCTGTGGCTTTTTAGTAAGGTGATTAACGAAAAGCTGACGTATGCATCAGTTTTATAATGGTTTATTTTTTTATTCGACACTAAAGCATCTGAATAACTAAAAAGGGAGCTAAACGTCCGACCGTTTTACTTCTTCCTCTTTTTCCTCTTCGGCCGGCCACGACGGCC
**************************************************************************..............((.....((((..((((.....(((.............)))....))))..))))...))******************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total V057
head
........................................................................TCGTGCTAGTGTCTGGGCCT............................................................................................................................................................... 20 3 11 0.09 1 1
...................CTAGAAGTAACGGAGCGA...................................................................................................................................................................................................................... 18 2 13 0.08 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_1:2393186-2393436 + dpe_533 AGA---GCCGAAAGAA-----ATT-------------T-GTCATCGTCATTG-------CCTC--G-CTTACAATTGTTCAAATAAACAGTGCCAGCGCTCGCCAGC-------------------------ACGATAACAGACACCGAAAA--ATCATTCCA-CTAATTGCTTT---TCGA-CTG---------CATACGTAGTCAAAATA-----TTACCAA-AT---------------AAAAAAATAAGCTGTGAT---------------------TTC---GTAG-ACTTATTGATTTTT--------C----CCTCGA------TTTGCAGGCTGGCAAAATGAAGAAGGAGAAAAAGGAGAAGCCGGCCGGTGCTGCCGG
dp5 4_group3:913492-913742 + dps_1489 AGA---ACCGAAAGAA-----ATT-------------T-GTCATCGTCATTG-------CCTC--G-CTTACAATTGTTCAAATAACCAGTGCCAGCGCTCGCCAGC-------------------------ACGATAACAGACACCGAAAA--ATCATTCCA-CTAATTGCTTT---TCGA-CTG---------CATACGTAGTCAAAATA-----ATACCAA-AT---------------AAAAAAATAAGCTGTGAT---------------------TTC---GTAG-ACTTATTGATTTTT--------C----CCTCGA------TTTGCAGGCTGGCAAAATGAAGAAGGAGAAAAAGGAGAAGCCGGCCGGTGCTGCCGG
droWil2 scf2_1100000004851:48235-48458 + ACC---AC-AAAAGTA-----TTT-------------TGGTTATTGCTTTTG-------TTTC--G-TTAACAATTGTTTAAACAACTACA----AC----------A-G------------ACAGCAA---TTGATAGTAGATAACGAAAAAGAGCATTTAAAGCAAT----------TGC-TTG---------TCTACGTAGGCAAAAAA------AAACAC--T---------------AAA-ATTTAAG--------------------------------------TTTTTATTGATTTTC--------CATCCTTTAAC------CTTGTAGGCATCCAAAATGAAGAAGGAGAA------GAAACCTGCTGCTGGCGGCGG
droVir3 scaffold_12963:15930916-15931188 + dvi_12136 AGA---ACCAAAAACA-----------------------GTTATTCTTATTGTCATTTGCTTTTTG-GTGACAACTGTGTAAACGACAAA-----------------ACA------------AAAACAG---T--------GACACCGAAAA--TTCATTACAAATAATTGCT--TTCTTAA-CTGTGTACGTTGCCCACGTAGCTAAAAGAAGTTTGATACAC-T----------------------TTCTG-----ATTTATATGATGTATATTTATTACGCCTTGGCG-ATTTATTGATTTTT--------TTTCATACACA------ATTGCAGGCAGCTAAAATGAAGAAGGAGAAAAAGGAGAAGCCAGCTGCAGGCGGCGG
droMoj3 scaffold_6500:5374581-5374851 + AGA---GCCGAAAACAC----TGTTAT----------T-GTATTTTTTGTTT-------TCGT--GTGTGACAACTGTGCAAACGACAAA-----------------ACACGAAAAAAGAAAAAAACAC---ACAAAA------------AT--ATCATTAAATATAATTGCT--TTCCTAA-CTGTGTATGTTGTCTACGTAGCATCAAAG--AT-AAACAAT-TTTATTTTTTTTTTTTCGAA--TTT-------------------------------TGTATTGA--ATTTTATTGATTA-------ATTTT-TTGTGCGC------ATTGCAGGCGGCTAAAATGAAGAAGGAGAAAAAGGAAAAGCCAGCTGCAGGCGGCGG
droGri2 scaffold_15252:13359103-13359371 + AAA---GCAAAGAGCAA----ACTTTCCGTTTTCTTTTGGTGG---TCGTCT------GCTT---GTCTGACAACTGTGTCAACCGCAACA----GC----------A-AACAACAAAA---ACA--AT---ACAAAAGCATACACCGAAAA--TTCATTAATTACAATTGCTAA---TTAA-ACGTGTACGTTGCTTGCGTAGCTAACGAA-GAT-A-ATGAT-TTAACTT----------TTC-TTTTCTGC---------------------------TGCATTGA----CA-AATGAGTT----------T--TCATTGAT------TTTGCAGGCTGCCAAGATGAAGAAGGAAAA------GAAACCCGCTGGAGCCGGCGG
droAna3 scaffold_12943:2529884-2530093 - AGT---GC--------------------------------------CCATTG-------CTTT--T-CTTCCAATTGTTCAAACAACAAG-----------------AAA----------------CAGTCAACGAAACCAGATACCGAAAA--ATCATTTGA-CTGATTGCCAC---TCGACTTG---------CATACGTAGCAGAAATT-----GTCCCAT-TT---------------CAC-ATTCGAA---------------------------------------TATTATTGATTTTT--------T-TCACATCGA------CTTTCAGGCAGCCAAGATGAAGAAGGAAAAAAAAGAAAAGCCTGCCG---GTGGAGG
droBip1 scf7180000396728:802584-802797 + -------CCGAAAGTG-----------------------------CCCACTG-------CTTT--C-TATCCAATTGTTCAAATAGCAAG-----------------AAA----------------CAGTCAACGAAACCAGATACCGAAAA--ATCATTTGA-CTGATTGCCAC---TCGACTTG---------CATACGTAGCAGAAATT-----GCCCCAT-TC---------------GAA-ATTCAAA---------------------------------------TATTATTGATTTTT--------T--CACATCGA------TTTTCAGGCAGCCAAGATGAAGAAGGAGAAAAAGGAAAAACCGGCCG---GTGCAGG
droKik1 scf7180000302408:859552-859760 + GGT---GCCGAAAAAC-----TCA-------------T-GTATCTCTCAGTG-------CTGT--G-TCCCCAATTGTTTAAACAGTCAG-----------------AA----------------CCAG---TCG---GGAGATAGCGAAAGACGGC--A---------------GACATTC-GTG---------CATACGTAGCATAAAAT-----C-TTTAC-CT---------------AAA-AC-TAAA---------------------------------------ACTTATTGATTTTT--------C-TCACATGGA------TTTGCAGGCGGCCAAGATGAAGAAGGAGAAAAAGGAGAAGCCGGCTG---GCGCCAG
droFic1 scf7180000453936:50272-50501 - AGC---GCCGAAAGCG-----TCT-------------T-GTTATTCTCATCG-------CTTTTTG-CCCCCAATTGTTCAAACACCAAG-----------------AAAA--------AGAACATCAG---TCGAAAGTAGATACCGAAAA-AATCGTT---------------TACCTAA-TTG---------CATACGTAGCAGAAATT-----CAGCAAC-TT---------------TAC-ATTTCAG---------------------------------------TGTTATTGATTTTT--------T--TCAATGGATTTGTATTTGCAGGCGGCCAAAATGAAGAAGGAGAAAAAGGAAAAACCGGCCG---GCGGTGG
droEle1 scf7180000491028:3059059-3059280 - AAATACTTTAAAAGCA-----TCT-------------T-GTCGTTTCCATTG-------CTTTTAG-TCCCCAATTGTTCAAACACCAAG-----------------A--------------ATATCAG---TCGAAAGTAGATACCGAAAA-AAGCGTT---------------TACTTAA-TTG---------CATACGTAGCAGGAATT----CCAGCCAC-TT---------------TAA-ATTTTCA---------------------------------------TCATATTGATTTTT--------T--CCCATGGA------TTTGCAGGCGGCCAAAATGAAGAAGGAGAAAAAGGAGAAGCCGGCCG---GTGGCGC
droRho1 scf7180000761302:24404-24617 - AAA---ACGCCGAAAAG----TCT-------------T-GTCATTACCATTG-------CTTT--G-TC-CCAATTGTTTAAACACCAAG-----------------A--------------ACATCAG---TCGAAAGTAGATACCGTAAA-AAGCGTT---------------TGCCTAA-TTG---------CATACGTAGCAGTAATT-----CAGACAC-TT---------------AAA-ATTTCCG---------------------------------------TTTTATTGATTTTT--------T----CATGGA------TTTTCAGGCGACCAAGATGAAGAAGGAGAAAAAGGAGAAGCCGGCCG---GCGCTGG
droBia1 scf7180000302422:912086-912305 - ACC---GCCGAAAGCG-----TCT-------------T-GTTGTTCCCATCG-------CCTT--G-TC-CCAATTGTTCGAACACCAAG-----------------AACA--------TCGCCATCAG---TCGAAAGCAGATACCGAAAA-AAGCGCT---------------TGTCTAA-TTG---------CATACGTAGCAGAAATT-----TAGCTTC-TT---------------GGA-ATTTCCG---------------------------------------TTTTATTGATTTTT--------T---CGATGGA------TTTGCAGGCTGCCAAGATGAAGAAGGAGAAGAAGGAGAAGCCGGCCG---GAGGTGG
droTak1 scf7180000415863:119235-119467 - AGC---GCCGAAAGCG-----CCT-------------T-GTTACTCTCATTG-------CCTT--G-TCCCCAATTGTTCAAACAACAAG-----------------AAAACAAGAAAGACATCAACAG---TCGAAAGTAGATACCGAATAAAAGCGTT---------------TGCCTAA-TTG---------CATACGTAGCAGAATTT----TGAGCCCCGTC---------------GGA-ATTTCCG---------------------------------------TTTTATTGATTTTT--------T--CCAATGGA------TTTGCAGGCTTCCAAGATGAAGAAGGAGAAAAAGGAGAAGCCGGCCG---GAGGTGG
droEug1 scf7180000409122:487758-487981 + AGC---GCCGAAAGCG-----TCT-------------T-GTTATTCTCTTTG-------CCTT--G-TCCCCAATTGTTTAAACATTAGG-----------------AAAA--------AAAACATCAG---TCGAAAGTTGATACCGAAAAAGAGCGTT---------------TGCCTAA-TTG---------CATACGTAGCAAAATTT-----AACCTAC-CT---------------GAA-ATTTCCG---------------------------------------TTTTATTGATTTTT--------T-CAAAATGGA------TTTGCAGGCTGCCAAGATGAAGAAGGAGAAAAAGGAGAAGCCGGCCG---GCGGTGG
dm3 chr2L:12104304-12104538 + AGC---ACCGAAAACATAGCACCG-------------A-AAAGTGCTCATTG-------CCAT--G-TCCCCAATTGTTTAAACAATAAG-----------------AAA------------ACATCAG---TCGAAAGTAGATACCGAAAAAGAGCATT---------------TGTCTAA-TTG---------CATACGTAGCACACTTG-----TGGCCAC-TT---------------GAATATCTCCG-----G--------------------------------TTTATATTGATTTTTAACCTATTT--CCGATGGA------TTTGCAGGCTGCCAAGATGAAGAAGGAGAAAAAGGAGAAGCCATCCG---GCGGTGG
droSim2 2l:11765164-11765383 + dsi_14811 -GT---GCCGAAAA----------------------------GTGCTCATTG-------CCAT--G-TCCCCAATTGTTTAAACAATAAG-----------------AAA------------ACATCAG---TCGAAAGTAGATACCGAAAAAGAGCGTT---------------TGTCTAA-TTG---------CATACGTAGCACACTTG-----TGGCCAC-TT---------------GAATATCTCTG-----A--------------------------------TTTGTATTGATTTTTAACCTTTTT--CCGATGGA------TTTGCAGGCTGCCAAGATGAAGAAGGAGAAAAAGGAGAAGCCATCCG---GCGGTGG
droSec2 scaffold_10446:1087-1306 + -GC---GCCGAAAA----------------------------GTGCTCATTG-------CCAT--G-TCCCCAATTGTTTAAACAATAAG-----------------AAA------------ACATCAG---TCGAAAGTAGATACCGAAAAAGAGCGTT---------------TGTCTAA-TTG---------CATACGTAGCACACTTG-----TGGCCAC-TT---------------GAATATCTCTG-----A--------------------------------TTTTTATTGATTTTTAACCTATTT--CCGATGGA------TTTACAGGCTGCCAAGATGAAGAAGGAGAAAAAGGAGAAGCCATCCG---GCGGTGG
droYak3 2L:8521703-8521933 + AGC---GCCGAAAACG-----TCT-------------T-GTTATTCCCATTG-------CCGT--G-TCCCCAATTGTTTAAACAATAAG-----------------AAA------------ACATCAG---TCGAAAGTAGATACCGAACAAGAGCGTT---------------TGCCTAA-TTG---------CATACGTAGCACATTT------TGGCAAA-TT---------------GAATGTATTAGTT---G--------------------------------TTTTTATTGATTTTTAACCTATTT--CCTATGGA------TTTGCAGGCTGCCAAGATGAAGAAGGGGAAAAAGGAAAAGCCATCCG---GCGGTGG
droEre2 scaffold_4929:13309176-13309408 - AGA---GTCGAAAACG-----TCT-------------T-GTTATTCTCATTG-------CCGT--G-TCCCCAATTGTTTAAACAGTAAG-----------------AAA------------ACATCAG---TCGAAAGTTGAAACCTGAGAAGAGCGTT---------------TGCCTAA-TTG---------CATACGTAGCACACTT------TGGCCAA-TT---------------GAAAATTTTCGTTTTTT---------------------------------TTTTATTGATTTTTAACCTTTTT--CTGATGGA------TTTGCAGGCTGCCAAGATGAAGAAGGAGAAAAAGGAGAAGCCATCCG---GCGGCGG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
AGA---GCCGAAAGAA-----ATT-------------T-GTCATCGTCATTG-------CCTC--G-CTTACAATTGTTCAAATAAACAGTGCCAGCGCTCGCCAGC-------------------------ACGATAACAGACACCGAAAA--ATCATTCCA-CTAATTGCTTT---TCGA-CTG---------CATACGTAGTCAAAATA-----TTACCAA-AT---------------AAAAAAATAAGCTGTGAT---------------------TTC---GTAG-ACTTATTGATTTTT--------C----CCTCGA------TTTGCAGGCTGGCAAAATGAAGAAGGAGAAAAAGGAGAAGCCGGCCGGTGCTGCCGGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................................................................................................................................................................................................................................................................................................................................................GCAAAATGAAGAAGGAGAAAAAGGA.....................2514.004300001
........................................................................................................................................................................................................................................................ATAAGCTGTGAT---------------------TTC---GTAG-ACTT............................................................................................2313.003300000
..................................................................................................................................................................................................................................................................AT---------------------TTC---GTAG-ACTTATTGATTTTT--------C----CCT..................................................................2712.002200000
..................................................................................................................................................................A-CTAATTGCTTT---TCGA-CTG---------C................................................................................................................................................................................................2012.002200000
.........GAAAGAA-----ATT-------------T-GTCATCGTC....................................................................................................................................................................................................................................................................................................................................................2011.001100000
.............................................................................................................................................................................TT---TCGA-CTG---------CATACGTAGT.......................................................................................................................................................................................1911.001001000
.......................................................................................................................................................................................................................................................AATAAGCTGTGAT---------------------TTC---GTAG-ACT.............................................................................................2311.001100000
.....................................................................................................................................................................................................................................................................................................................................................................AGAAAAAGGAGAAGCCGGC............1911.001010000
...............................................................................................................................................................................................................................................................................................GTAG-ACTTATTGATTTTT--------C----CCC..................................................................2211.001100000
...........................................................................................................................................................................................................................................................................................................................................................................AGGAGAAGCCGGCCGGTGCTGCC..2311.001001000
...................................................................................................................................................................................................................................................................................................................................................................GGAGAAAAAGGAGAAGCCGGCCGGTG.......2611.001100000
.................................................................................................................................................................................................................................................................GAT---------------------TTC---GTAG-ACTTATTGATT.....................................................................................2111.001001000
...............................................................................................................................................................................................................................................................................................................................................................................GAAGCCGGCCGGTGCTGCC..1911.001001000
...............................................................................................................................................................................................................................................................................................GTAG-ACTTATTGATTTTT--------C----CCT..................................................................2211.001100000
......................TT-------------T-GTCATCGTCATTG-------CCT......................................................................................................................................................................................................................................................................................................................................1911.001100000
..........................................................................................................................................................................GCTTT---TCGA-CTG---------CATACGTAGT.......................................................................................................................................................................................2211.001001000
......................TT-------------T-GTCATCGTCATTG-------CCG......................................................................................................................................................................................................................................................................................................................................1920.501100000
dp5
AGA---ACCGAAAGAA-----ATT-------------T-GTCATCGTCATTG-------CCTC--G-CTTACAATTGTTCAAATAACCAGTGCCAGCGCTCGCCAGC-------------------------ACGATAACAGACACCGAAAA--ATCATTCCA-CTAATTGCTTT---TCGA-CTG---------CATACGTAGTCAAAATA-----ATACCAA-AT---------------AAAAAAATAAGCTGTGAT---------------------TTC---GTAG-ACTTATTGATTTTT--------C----CCTCGA------TTTGCAGGCTGGCAAAATGAAGAAGGAGAAAAAGGAGAAGCCGGCCGGTGCTGCCGGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
............................................................................................................................................................CATTCCA-CTAATTGCTTT---TCGA-CT...........................................................................................................................................................................................................2414.0040400000000
......................................................................................................................................................................................................................................................................................................................................................................GAAAAAGGAGAAGCCGGC............1813.0030300000000
..................................................................................................................................................................................................................................................................................................................................................GCTGGCAAAATGAAGAAGGA..............................2013.0030200000001
........................................................................................................................................................................................................................................................................................................................................................................AAAAGGAGAAGCCGGCCGGTGCTGC...2512.0020200000000
.............................................................................................................................................................ATTCCA-CTAATTGCTTT---TCGA-CT...........................................................................................................................................................................................................2312.0020200000000
.........................................................................................................................................................................................................................................................................................................................................................................AAAGGAGAAGCCGGCCGG.........1812.0020200000000
...........................................................................................GCCAGCGCTCGCCAGC-------------------------ACGAT...........................................................................................................................................................................................................................................................2112.0020100001000
...............................................................................................................................................................................................................................................................................................................TTT--------C----CCTCGA------TTTGCAGGCTGGC............................................2312.0020200000000
...........................................................................................................................................................................................................................................................................................................GATTTTT--------C----CCTCGA------TTTGCAG..................................................2111.0010100000000
....................................................................................................................................................................................................................................................AAAAATAAGCTGTGAT---------------------TTC---GTAG-ACTT............................................................................................2711.0010100000000
............................................................................................................................................................................................................................................................................................................ATTTTT--------C----CCTCGA------TTTGCAGGC................................................2211.0010100000000
.........................................................................................GTGCCAGCGCTCGCCAGC-------------------------ACG.............................................................................................................................................................................................................................................................2111.0010100000000
..................................................................................................................................................................................................................................................................................................................................................GCTGGCAAAATGAAGAAGGAGA............................2211.0010100000000
..................................................................................................................................................................................................................................................................................................................................................GCTGGCAAAATGAAGAAGGAG.............................2111.0010100000000
............................................CGTCATTG-------CCTC--G-CTTACA...........................................................................................................................................................................................................................................................................................................................1911.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................AAAAGGAGAAGCCGGCCGGTGC......2211.0010100000000
.........................................................................................................................................................................TGCTTT---TCGA-CTG---------CATACGTAGT.......................................................................................................................................................................................2311.0010100000000
..................................................................................ATAACCAGTGCCAGCGCTCGCCAGC-------------------------................................................................................................................................................................................................................................................................2511.0010100000000
..................................................................................................................................................................................................................................................................AT---------------------TTC---GTAG-ACTTATTGATT.....................................................................................2011.0010100000000
...........................................................................................................................................................................................................................................................................................C---GTAG-ACTTATTGATTTTT--------C----CCTCGA------TT.......................................................2811.0010100000000
.................................................................................................................................................................CA-CTAATTGCTTT---TCGA-CT...........................................................................................................................................................................................................1911.0010100000000
.................................................................................................................................................................................................................................................................................................AG-ACTTATTGATTTTT--------C----CCTCGA------TTT......................................................2611.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................GAAAAAGGAGAAGCCGGCC...........1911.0010010000000
..........................................................................................................................................................................GCTTT---TCGA-CTG---------CATACGTA.........................................................................................................................................................................................2011.0010100000000
...........................................................................................GCCAGCGCTCGCCAGC-------------------------AC..............................................................................................................................................................................................................................................................1811.0010100000000
.................................................................................................................................................................................................................................AT---------------AAAAAAATAAGCTGTGAT---------------------TTC---GTAG-................................................................................................2711.0010100000000
........................................................................................................................................................................TTGCTTT---TCGA-CTG---------CATACGT..........................................................................................................................................................................................2111.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................GAAAAAGGAGAAGCCGGCCGGTGCTGCC..2811.0010010000000
......................................................................................................................................................AA--ATCATTCCA-CTAATTGCTTT---TCGA-CT...........................................................................................................................................................................................................2811.0010100000000
...........................................................................................................................................................TCATTCCA-CTAATTGCTTT---TCGA-CT...........................................................................................................................................................................................................2511.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................GGAGAAGCCGGCCGGTGCT.....1911.0010100000000
................................................................................................CGCTCGCCAGC-------------------------ACGATAACA.......................................................................................................................................................................................................................................................2011.0010100000000
...........................................................................................................................................................................................................................................................................................C---GTAG-ACTTATTGATTTTT--------C----CCT..................................................................2311.0010100000000
..................................................TG-------CCTC--G-CTTACAATTGTTCAA..................................................................................................................................................................................................................................................................................................................2211.0010100000000
....................................................................................................................................ACGATAACAGACACCGAAAA--AT........................................................................................................................................................................................................................................2211.0010100000000
.................................................................................................................................................................................................................................................................................................AG-ACTTATTGATTTTT--------C----CCTC.................................................................2111.0010100000000
.................................................................................................GCTCGCCAGC-------------------------ACGATAACAGACACCGA...............................................................................................................................................................................................................................................2711.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................AAAAGGAGAAGCCGGCCGGTGCTG....2411.0010100000000
....................................................................................AACCAGTGCCAGCGCTCGCCAGC-------------------------................................................................................................................................................................................................................................................................2311.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................AGGAGAAGCCGGCCGGTG.......1811.0010100000000
..................................................................................................................................................................................................................................................................AT---------------------TTC---GTAG-ACTTATTGATTT....................................................................................2111.0010100000000
...........................................................................................GCCAGCGCTCGCCAGC-------------------------ACGATAACA.......................................................................................................................................................................................................................................................2511.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................AGAAAAAGGAGAAGCCGGCCG..........2111.0010100000000
...........................................................................................................................................................TCATTCCA-CTAATTGCTTT---TCGA-CTG---------.................................................................................................................................................................................................2611.0010100000000
............................................................................................................................................................................................................................................................GCTGTGAT---------------------TTC---GTAG-ACT.............................................................................................1811.0011000000000
....................................................................................................................................ACGATAACAGACACCGAAAA--..........................................................................................................................................................................................................................................2011.0010000001000
..........................................ATCGTCATTG-------CCTC--G-CTTAC............................................................................................................................................................................................................................................................................................................................2011.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................AGAAGCCGGCCGGTGCTGCC..2011.0010100000000
..........................................................................................................................................................ATCATTCCA-CTAATTGCTTT---TCGA-CT...........................................................................................................................................................................................................2611.0010100000000
................................................................................................................................................................................................................................................................................................................TT--------C----CCTCGA------TTTGCAGGCTG..............................................2011.0010100000000
...............................................................................................................................................................................................................................................................GTGAT---------------------TTC---GTAG-ACTTATT.........................................................................................1911.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................GAAGCCGGCCGGTGCTGCC..1911.0010100000000
......................................................................................................................................GATAACAGACACCGAAAA--AT........................................................................................................................................................................................................................................2011.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................AATGAAGAAGGAGAAAAAGGA.....................2111.0010100000000
........................................................................................................................................................................................................................................................ATAAGCTGTGAT---------------------TTC---GTAG-ACTT............................................................................................2311.0010100000000
................................................................................................................................................................................................................................................................................................................................................AGGCTGGCAAAATGAAGAAGGA..............................2211.0010100000000
..............................................................................................................................................................................................................................................................................................................TTTT--------C----CCTCGA------TTTGCAGGCT...............................................2111.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................GGAGAAAAAGGAGAAGCCGGCCGGT........2511.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................AAAAGGAGAAGCCGGCCGGTGCT.....2311.0010100000000
...............................................................................................................................................................................................................................................................GTGAT---------------------TTC---GTAG-ACTTATTGATT.....................................................................................2311.0010100000000
..........................................................................................................................................................................................................................................................................................................................C----CCTCGA------TTTGCAGGCTGGC............................................2011.0010100000000
...........................................................................................GCCAGCGCTCGCCAGC-------------------------ACGATAACAGA.....................................................................................................................................................................................................................................................2711.0010100000000
.........................................................................................GTGCCAGCGCTCGCCAGC-------------------------................................................................................................................................................................................................................................................................1811.0010100000000
..........................................................................................................................................................ATCATTCCA-CTAATTGCTTT---TC................................................................................................................................................................................................................2211.0010100000000
................................................................................................................................................................................................................................................................TGAT---------------------TTC---GTAG-ACTTATTGATT.....................................................................................2211.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................AAGGAGAAAAAGGAGAAGCCGGCCGG.........2611.0010100000000
....................................................................................................................................ACGATAACAGACACCGAAA.............................................................................................................................................................................................................................................1911.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................AATGAAGAAGGAGAAAAAGGAGAAGCC...............2711.0010100000000
droWil2
ACC---AC-AAAAGTA-----TTT-------------TGGTTATTGCTTTTG-------TTTC--G-TTAACAATTGTTTAAACAACTACA----AC----------A-G------------ACAGCAA---TTGATAGTAGATAACGAAAAAGAGCATTTAAAGCAAT----------TGC-TTG---------TCTACGTAGGCAAAAAA------AAACAC--T---------------AAA-ATTTAAG--------------------------------------TTTTTATTGATTTTC--------CATCCTTTAAC------CTTGTAGGCATCCAAAATGAAGAAGGAGAA------GAAACCTGCTGCTGGCGGCGGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....................................................................................................................................................................................................................................................................................................................................................ATCCAAAATGAAGAAGGAGA............................2011.00100010
........................................................................................................................................................................................................................................................................................................................................................................A------GAAACCTGCTGCTGGCGG...1911.00100010
.........................................................................................................................................................................................G---------TCTACGTAGGCAAAAAA------AAAC......................................................................................................................................................................2211.00100100
.......................................................................................................................................ATAGTAGATAACGAAAAAGA.........................................................................................................................................................................................................................................2011.00100010
...................................................................................................................................................................................................................................................................................................................................................................GGAGAA------GAAACCTGCTGCTGGC.....2211.00101000
.......................................................................................................................................................................................................................................................................................................................................................CAAAATGAAGAAGGAGAA------GA...................2011.00100010
............................................................................................................................................................................................................................................................................................................................................................TGAAGAAGGAGAA------GAAACCTGC............2211.00100001
.................................................................................................................................................................................................................................................................................................................................................GGCATCCAAAATGAAGAAGG...............................2011.00100010
......................................................................................................................................................................................................................................................................................................................................................CCAAAATGAAGAAGGAGAA------GAAACC...............2511.00100100
........................................................................................................................................................................................................................................................................................................................................................AAAATGAAGAAGGAGAA------GA...................1911.00100100
droVir3
AGA---ACCAAAAACA-----------------------GTTATTCTTATTGTCATTTGCTTTTTG-GTGACAACTGTGTAAACGACAAA-----------------ACA------------AAAACAG---T--------GACACCGAAAA--TTCATTACAAATAATTGCT--TTCTTAA-CTGTGTACGTTGCCCACGTAGCTAAAAGAAGTTTGATACAC-T----------------------TTCTG-----ATTTATATGATGTATATTTATTACGCCTTGGCG-ATTTATTGATTTTT--------TTTCATACACA------ATTGCAGGCAGCTAAAATGAAGAAGGAGAAAAAGGAGAAGCCAGCTGCAGGCGGCGGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................GAAAAAGGAGAAGCCAGC............1812.002000000000000000000000000000002000000000000000000000000000000000
............................................................................................................CA------------AAAACAG---T--------GACACCGAA..............................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................GACAACTGTGTAAACGACAA...........................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000100000000000000000000000000
......................................................................................................................................................AA--TTCATTACAAATAATTGCT--.....................................................................................................................................................................................................................2111.001000000000000000000000100000000000000000000000000000000000000000
............AACA-----------------------GTTATTCTTATTGTCAT............................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
............................................................................................................................................................................T--TTCTTAA-CTGTGTACGTTGC................................................................................................................................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................GAAGAAGGAGAAAAAGGAGAAGCC...............2411.001000000000000000000000000000000000000010000000000000000000000000
droMoj3
AGA---GCCGAAAACAC----TGTTAT----------T-GTATTTTTTGTTT-------TCGT--GTGTGACAACTGTGCAAACGACAAA-----------------ACACGAAAAAAGAAAAAAACAC---ACAAAA------------AT--ATCATTAAATATAATTGCT--TTCCTAA-CTGTGTATGTTGTCTACGTAGCATCAAAG--AT-AAACAAT-TTTATTTTTTTTTTTTCGAA--TTT-------------------------------TGTATTGA--ATTTTATTGATTA-------ATTTT-TTGTGCGC------ATTGCAGGCGGCTAAAATGAAGAAGGAGAAAAAGGAAAAGCCAGCTGCAGGCGGCGGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.......................................................................CAACTGTGCAAACGACAAA-----------------ACACGAAA.................................................................................................................................................................................................................................................................................2711.001100000
............................................................................................................................................................................................................................................................................................................................................................................GGAAAAGCCAGCTGCAGGCG....2011.001100000
droGri2
AAA---GCAAAGAGCAA----ACTTTCCGTTTTCTTTTGGTGG---TCGTCT------GCTT---GTCTGACAACTGTGTCAACCGCAACA----GC----------A-AACAACAAAA---ACA--AT---ACAAAAGCATACACCGAAAA--TTCATTAATTACAATTGCTAA---TTAA-ACGTGTACGTTGCTTGCGTAGCTAACGAA-GAT-A-ATGAT-TTAACTT----------TTC-TTTTCTGC---------------------------TGCATTGA----CA-AATGAGTT----------T--TCATTGAT------TTTGCAGGCTGCCAAGATGAAGAAGGAAAA------GAAACCCGCTGGAGCCGGCGGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...............................................CGTCT------GCTT---GTCTGACAACTGTGTC...................................................................................................................................................................................................................................................................................................................2511.00110
........................................................................................................................................................................................................................................................................................................................................................AAGATGAAGAAGGAAAA------GA...................1911.00110
droAna3
AGT---GC--------------------------------------CCATTG-------CTTT--T-CTTCCAATTGTTCAAACAACAAG-----------------AAA----------------CAGTCAACGAAACCAGATACCGAAAA--ATCATTTGA-CTGATTGCCAC---TCGACTTG---------CATACGTAGCAGAAATT-----GTCCCAT-TT---------------CAC-ATTCGAA---------------------------------------TATTATTGATTTTT--------T-TCACATCGA------CTTTCAGGCAGCCAAGATGAAGAAGGAAAAAAAAGAAAAGCCTGCCG---GTGGAGGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.................................................................................................................................................................................................................................................................................................................................................GGCAGCCAAGATGAAGAAGGAAAAAA.........................2612.002000011
...............................................................................................................................................................................................................................................................................................................................................................AGAAGGAAAAAAAAGAAAA..................1911.001000100
...............................................................................................................................................................................................................................................................................................................................................CAGGCAGCCAAGATGAAG...................................1811.001100000
.............................................................................................................................................................................................................................................................................................................................................................................GAAAAGCCTGCCG---GTGGAG.1911.001000010
...............................................................................................................................................................................................................................................................................................................................................................AGAAGGAAAAAAAAGAAAAGCC...............2211.001010000
..........................................................................................................................................................................................................................................................................................................................................................................AAAGAAAAGCCTGCCG---GC.....1820.501010000
droBip1
-------CCGAAAGTG-----------------------------CCCACTG-------CTTT--C-TATCCAATTGTTCAAATAGCAAG-----------------AAA----------------CAGTCAACGAAACCAGATACCGAAAA--ATCATTTGA-CTGATTGCCAC---TCGACTTG---------CATACGTAGCAGAAATT-----GCCCCAT-TC---------------GAA-ATTCAAA---------------------------------------TATTATTGATTTTT--------T--CACATCGA------TTTTCAGGCAGCCAAGATGAAGAAGGAGAAAAAGGAAAAACCGGCCG---GTGCAGGSizeHit CountTotal NormTotal
No Reads
droKik1
GGT---GCCGAAAAAC-----TCA-------------T-GTATCTCTCAGTG-------CTGT--G-TCCCCAATTGTTTAAACAGTCAG-----------------AA----------------CCAG---TCG---GGAGATAGCGAAAGACGGC--A---------------GACATTC-GTG---------CATACGTAGCATAAAAT-----C-TTTAC-CT---------------AAA-AC-TAAA---------------------------------------ACTTATTGATTTTT--------C-TCACATGGA------TTTGCAGGCGGCCAAGATGAAGAAGGAGAAAAAGGAGAAGCCGGCTG---GCGCCAGSizeHit CountTotal NormTotal
No Reads
droFic1
AGC---GCCGAAAGCG-----TCT-------------T-GTTATTCTCATCG-------CTTTTTG-CCCCCAATTGTTCAAACACCAAG-----------------AAAA--------AGAACATCAG---TCGAAAGTAGATACCGAAAA-AATCGTT---------------TACCTAA-TTG---------CATACGTAGCAGAAATT-----CAGCAAC-TT---------------TAC-ATTTCAG---------------------------------------TGTTATTGATTTTT--------T--TCAATGGATTTGTATTTGCAGGCGGCCAAAATGAAGAAGGAGAAAAAGGAAAAACCGGCCG---GCGGTGGSizeHit CountTotal NormTotal
No Reads
droEle1
AAATACTTTAAAAGCA-----TCT-------------T-GTCGTTTCCATTG-------CTTTTAG-TCCCCAATTGTTCAAACACCAAG-----------------A--------------ATATCAG---TCGAAAGTAGATACCGAAAA-AAGCGTT---------------TACTTAA-TTG---------CATACGTAGCAGGAATT----CCAGCCAC-TT---------------TAA-ATTTTCA---------------------------------------TCATATTGATTTTT--------T--CCCATGGA------TTTGCAGGCGGCCAAAATGAAGAAGGAGAAAAAGGAGAAGCCGGCCG---GTGGCGCSizeHit CountTotal NormTotal
No Reads
droRho1
AAA---ACGCCGAAAAG----TCT-------------T-GTCATTACCATTG-------CTTT--G-TC-CCAATTGTTTAAACACCAAG-----------------A--------------ACATCAG---TCGAAAGTAGATACCGTAAA-AAGCGTT---------------TGCCTAA-TTG---------CATACGTAGCAGTAATT-----CAGACAC-TT---------------AAA-ATTTCCG---------------------------------------TTTTATTGATTTTT--------T----CATGGA------TTTTCAGGCGACCAAGATGAAGAAGGAGAAAAAGGAGAAGCCGGCCG---GCGCTGGSizeHit CountTotal NormTotal
No Reads
droBia1
ACC---GCCGAAAGCG-----TCT-------------T-GTTGTTCCCATCG-------CCTT--G-TC-CCAATTGTTCGAACACCAAG-----------------AACA--------TCGCCATCAG---TCGAAAGCAGATACCGAAAA-AAGCGCT---------------TGTCTAA-TTG---------CATACGTAGCAGAAATT-----TAGCTTC-TT---------------GGA-ATTTCCG---------------------------------------TTTTATTGATTTTT--------T---CGATGGA------TTTGCAGGCTGCCAAGATGAAGAAGGAGAAGAAGGAGAAGCCGGCCG---GAGGTGGSizeHit CountTotal NormTotal
No Reads
droTak1
AGC---GCCGAAAGCG-----CCT-------------T-GTTACTCTCATTG-------CCTT--G-TCCCCAATTGTTCAAACAACAAG-----------------AAAACAAGAAAGACATCAACAG---TCGAAAGTAGATACCGAATAAAAGCGTT---------------TGCCTAA-TTG---------CATACGTAGCAGAATTT----TGAGCCCCGTC---------------GGA-ATTTCCG---------------------------------------TTTTATTGATTTTT--------T--CCAATGGA------TTTGCAGGCTTCCAAGATGAAGAAGGAGAAAAAGGAGAAGCCGGCCG---GAGGTGGSizeHit CountTotal NormTotal
No Reads
droEug1
AGC---GCCGAAAGCG-----TCT-------------T-GTTATTCTCTTTG-------CCTT--G-TCCCCAATTGTTTAAACATTAGG-----------------AAAA--------AAAACATCAG---TCGAAAGTTGATACCGAAAAAGAGCGTT---------------TGCCTAA-TTG---------CATACGTAGCAAAATTT-----AACCTAC-CT---------------GAA-ATTTCCG---------------------------------------TTTTATTGATTTTT--------T-CAAAATGGA------TTTGCAGGCTGCCAAGATGAAGAAGGAGAAAAAGGAGAAGCCGGCCG---GCGGTGGSizeHit CountTotal NormTotal
No Reads
dm3
AGC---ACCGAAAACATAGCACCG-------------A-AAAGTGCTCATTG-------CCAT--G-TCCCCAATTGTTTAAACAATAAG-----------------AAA------------ACATCAG---TCGAAAGTAGATACCGAAAAAGAGCATT---------------TGTCTAA-TTG---------CATACGTAGCACACTTG-----TGGCCAC-TT---------------GAATATCTCCG-----G--------------------------------TTTATATTGATTTTTAACCTATTT--CCGATGGA------TTTGCAGGCTGCCAAGATGAAGAAGGAGAAAAAGGAGAAGCCATCCG---GCGGTGGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..............................................................................................................................................ATACCGAAAAAGAGCATT---------------TGT..................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................TTT--CCGATGGA------TTTGCAG..................................................1822.5050000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000001010000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................GAAGAAGGAGAAAAAGGA.....................1822.5050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000001000000000000
.........................................................................................................................................AGTAGATACCGAAAAAGAG........................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................TAAG-----------------AAA------------ACATCAG---TCGAAAGTAGA.....................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................AGGCTGCCAAGATGAAGAAG................................2022.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................AG---TCGAAAGTAGATACCGAAAA............................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000010000000000000000000000
........................................AAGTGCTCATTG-------CCAT--G-TCC..............................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................AGAAGGAGAAAAAGGAGA...................1831.6750000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000001000000000000
....................................................................................................................................................................................................................................................................................................................................................TGCCAAGATGAAGAAGGAGAAA..........................2221.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................AGTAGATACCGAAAAAGAGCAT.....................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
.....................................................................................................................................................................................................................................................................................................................................................GCCAAGATGAAGAAGGAGAAAAAGGA.....................2621.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................GTCTAA-TTG---------CATACGTAGCA......................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
................................................................................................................................................................................GTCTAA-TTG---------CATACGTAGCACC....................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................AAAGAGCATT---------------TGTCTAA-TTG---------CA...............................................................................................................................................................................................2211.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................TCAG---TCGAAAGTAGATACCGAAAAA...........................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..C---ACCGAAAACATAGCACCG-------------A-A............................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
........................................................................................................................................................AGAGCATT---------------TGTCTAA-TTG---------.................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................AA-TTG---------CATACGTAGCACACTTG-----TGGCCA.....................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
..............................................................................................................................CAG---TCGAAAGTAGATACCGAAAAAGAGC.......................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.....................................................................................ATAAG-----------------AAA------------ACATCAG---TCGA............................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................TGCCAAGATGAAGAAGGAGAAAAAGGA.....................2721.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..................................................................................................................................................................................................................TG-----TGGCCAC-TT---------------GAATATCTCCG-----..................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
......................................................................................................................................................................................................................................................................................................................................................CCAAGATGAAGAAGGAGAAAAAGG......................2421.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
....................................................................................................................................................................................................................................................................................................................................................................GAGAAAAAGGAGAAGCCATC............2021.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002
...................................................................................................................................................................................................................................................................................................................................................CTGCCAAGATGAAGAAGG...............................1821.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.....................................A-AAAGTGCTCATTG-------CCAT--G-TCCCCAA..........................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................ACCG-------------A-AAAGTGCTCATTT-------.........................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................GAAAGTAGATACCGAAAAAGAG........................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................TGTCTAA-TTG---------CATACGTAGCA......................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................TTGATTTTTAACCTATTT--CCGATGGA------TT.......................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................AAG-----------------AAA------------ACATCAG---TCGAAAGTAGA.....................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
........................................................................................................................................AAGTAGATACCGAAAAAGAGCG......................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................GCTGCCAAGATGAAGAAGGAG.............................2121.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000001000000000000
............................................................................................................................................AGATACCGAAAAAGAGCG......................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................ATAAG-----------------AAA------------ACATCAG---TCGAAAGCT.......................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
................................................ATTG-------CCAT--G-TCCCCAATTG.......................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................A-TTG---------CATACGTAGCACACTTG-----...........................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CCG-------------A-AAAGTGCTCATTG-------CCAT--G-.................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
.....................................................................................ATAAG-----------------AAA------------ACATCAG---TCGAAA..........................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................ATCAG---TCGAAAGTAGATA...................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................GTAGATACCGAAAAAGAGCATT---------------TGTC.................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................................................................................................................................................................................................................................................................................................TTTAACCTATTT--CCGATGGA------TTTGCAG..................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................GGCTGCCAAGATGAAGAAG................................1921.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GC---ACCGAAAACATAGCACCG-------------...............................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
....................................................................................AATAAG-----------------AAA------------ACATCAG---TCGAAAGTAGAT....................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................CGAAAAAGAGCATT---------------TGTCTAA-A............................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
......................................................................................................................................GAAAGTAGATACCGAAAAAGA.........................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
............................................................................................................................................AGATACCGAAAAAGAGCATT---------------T....................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.......................................................................................................................................................................................................................................................................................................................................................................AAAAAGGAGAAGCCATCCG---GCGGT..2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................AAGATGAAGAAGGAGAAAAA........................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..................................................................................................................................................................................................................................................................................................................................................GCTGCCAAGATGAAGAAG................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
................................................................................................................................................................................................................................................................................................................................................AGGCTGCCAAGATGAAGA..................................1820.5010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................GCCAAGATGAAGAAGGAGAA...........................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................GAGAAGCCATCCG---GCGGTGG2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................TGAAGAAGGAGAAAAAGGAGAAGCC...............2520.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................AAGATGAAGAAGGAGAAAAAGG......................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................AGGAGAAAAAGGAGAAGC................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................GCTGCCAAGATGAAGAAGGA..............................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.................................................................................................................................................................................................................................................................................................................................TGGA------TTTGCAGGCTGCCAAGATGAAGA..................................2720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................ATTT--CCGATGGA------TTTGCAGGC................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................CCGATGGA------TTTGCAGGCTGCC............................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................AGAAAAAGGAGAAGCCATCC...........2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................................................................................................................................................................................................................................................................................................................ATTT--CCGATGGA------TTTGCAG..................................................1920.5010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................AAAGGAGAAGCCATCCG---GCGG...2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................AGGAGAAAAAGGAGAAGCCATCCG---GC.....2620.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................AAAGGAGAAGCCATCCG---GCGGTGG2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................AAAAAGGAGAAGCCATCCG---GCGGTG.2520.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................GGCTGCCAAGATGAAGAAGGA..............................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...................................................................................................................................................................................................................................................................................................................................................CTGCCAAGATGAAGAAGGAG.............................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................TT--CCGATGGA------TTTGCAGGCTGCCA...........................................2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................TATTT--CCGATGGA------TTTGCAGG.................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................CTATTT--CCGATGGA------TTTGCAG..................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................CCTATTT--CCGATGGA------TTTGCA...................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.......................................................................................................................................................................................................................................................................................................................................................CAAGATGAAGAAGGAGAAAAAGG......................2320.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......................................................................................................................................................................................................................................................................................................................TATTT--CCGATGGA------TTTGCAGGC................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................TGAAGAAGGAGAAAAAGGAGAAG.................2320.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
........................................................................................................................................................................................................................................................................................................................................................AAGATGAAGAAGGAGAAAAAG.......................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................TT--CCGATGGA------TTTGCAGG.................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................AGAAGGAGAAAAAGGAGAAGC................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................CAAGATGAAGAAGGAGAAAAAGGA.....................2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
..........................................................................................................................................................................................................................................................................................................................................................GATGAAGAAGGAGAAAAAGGAGAAGC................2620.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................GCTGCCAAGATGAAGAAGGAGAAAA.........................2520.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................AGAAGGAGAAAAAGGAGAA..................1930.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................AGGAGAAAAAGGAGAAG.................1730.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
-GT---GCCGAAAA----------------------------GTGCTCATTG-------CCAT--G-TCCCCAATTGTTTAAACAATAAG-----------------AAA------------ACATCAG---TCGAAAGTAGATACCGAAAAAGAGCGTT---------------TGTCTAA-TTG---------CATACGTAGCACACTTG-----TGGCCAC-TT---------------GAATATCTCTG-----A--------------------------------TTTGTATTGATTTTTAACCTTTTT--CCGATGGA------TTTGCAGGCTGCCAAGATGAAGAAGGAGAAAAAGGAGAAGCCATCCG---GCGGTGGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................................................................................................................GTAGATACCGAAAAAGAGC.......................................................................................................................................................................................................................................1911.00100100000000000000
..............................................................................TTAAACAATAAG-----------------AAA------------ACATCAG---TCGA............................................................................................................................................................................................................................................................2611.00100000010000000000
...............................................................................................................................................TACCGAAAAAGAGCGTT---------------TGTCTAA-T............................................................................................................................................................................................................2511.00100000000001000000
................................................................................................................................................................................................................................................................................................................................ATGGA------TTTGCAGGCTGCCAAGATGAA....................................2611.00100000001000000000
......................................................................................................................................................................................................................................................................................................................TTTTT--CCGATGGA------TTTGCAGGC................................................2211.00110000000000000000
...............................................................................................................................................................................................................................................................................................................TTTAACCTTTTT--CCGATGGA------TTTG.....................................................2411.00101000000000000000
.........................................................................................................................................................................................................................................................................................................................TT--CCGATGGA------TTTGCAGGCT...............................................2011.00100100000000000000
....................................................................................................................................................................................................ATACGTAGCACACTTG-----TGGCCAC-T..................................................................................................................................................................2411.00110000000000000000
............................................................................................................................ATCAG---TCGAAAGTAGATA...................................................................................................................................................................................................................................................1811.00110000000000000000
.............................................................................................................A------------ACATCAG---TCGAAAGTAGATACCGG...............................................................................................................................................................................................................................................2511.00100100000000000000
droSec2
-GC---GCCGAAAA----------------------------GTGCTCATTG-------CCAT--G-TCCCCAATTGTTTAAACAATAAG-----------------AAA------------ACATCAG---TCGAAAGTAGATACCGAAAAAGAGCGTT---------------TGTCTAA-TTG---------CATACGTAGCACACTTG-----TGGCCAC-TT---------------GAATATCTCTG-----A--------------------------------TTTTTATTGATTTTTAACCTATTT--CCGATGGA------TTTACAGGCTGCCAAGATGAAGAAGGAGAAAAAGGAGAAGCCATCCG---GCGGTGGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
................................................................................................................................................................................................................................................................................................................................................AGGCTGCCAAGATGAAGAAGGAGA............................2420.5010010
..........................................................................................................................................................................................................................................................................................................................................................GATGAAGAAGGAGAAAAAG.......................1920.5010100
..................................................................................................................................................................................................................................................................................................................................................GCTGCCAAGATGAAGAAG................................1820.5010010
......................................................................................................................................................................................................................................................................................................................................................................GAAAAAGGAGAAGCCATCCG---GCGGTG.2620.5010010
........................................................................................................................................................................................................................................................................................................................................................................AAAAGGAGAAGCCATCCG---GC.....2020.5010010
..................................................................................................................................................................................................................................................................................................................................................................AGGAGAAAAAGGAGAAGC................1820.5010010
droYak3
AGC---GCCGAAAACG-----TCT-------------T-GTTATTCCCATTG-------CCGT--G-TCCCCAATTGTTTAAACAATAAG-----------------AAA------------ACATCAG---TCGAAAGTAGATACCGAACAAGAGCGTT---------------TGCCTAA-TTG---------CATACGTAGCACATTT------TGGCAAA-TT---------------GAATGTATTAGTT---G--------------------------------TTTTTATTGATTTTTAACCTATTT--CCTATGGA------TTTGCAGGCTGCCAAGATGAAGAAGGGGAAAAAGGAAAAGCCATCCG---GCGGTGGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......................................................................................................................................................................................................................................................................................................................ATTT--CCTATGGA------TTTGCAG..................................................1911.00101000000000
......................................................................................................................................................................................................................................................................................................................................................CCAAGATGAAGAAGGGGAAAAAGGA.....................2511.00100000010000
....................................................................................................................................................................................................................................................................................................................................................TGCCAAGATGAAGAAGGGGAAAAAGGAAA...................2911.00100000010000
....................................................................................................................................................................................................................................................................................................................................................TGCCAAGATGAAGAAGGGGA............................2011.00100000100000
..........................................................................................................................................................................................................................................................................................................................................................GATGAAGAAGGGGAAAAAG.......................1911.00100000010000
.....................................................................................................................................................................................................................................................................................................................................................GCCAAGATGAAGAAGGGGAAA..........................2111.00101000000000
droEre2
AGA---GTCGAAAACG-----TCT-------------T-GTTATTCTCATTG-------CCGT--G-TCCCCAATTGTTTAAACAGTAAG-----------------AAA------------ACATCAG---TCGAAAGTTGAAACCTGAGAAGAGCGTT---------------TGCCTAA-TTG---------CATACGTAGCACACTT------TGGCCAA-TT---------------GAAAATTTTCGTTTTTT---------------------------------TTTTATTGATTTTTAACCTTTTT--CTGATGGA------TTTGCAGGCTGCCAAGATGAAGAAGGAGAAAAAGGAGAAGCCATCCG---GCGGCGGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.................................................................................................................................................................................................................................................................................................................................................GGCTGCCAAGATGAAGAAGGAGAAAA.........................2611.0010000100
.....................................................................................................................................................................................................................................................................................................................................................GCCAAGATGAAGAAGGAGAA...........................2011.0010000100
..........................................................................................................................................................................................................................................................................................................................................................GATGAAGAAGGAGAAAAAGG......................2011.0010000010
.............................................................................................................................................................................................................................................................................................................................................................GAAGAAGGAGAAAAAGGA.....................1811.0010000100
..............................................................................................................................................AAACCTGAGAAGAGCGTT---------------TGC..................................................................................................................................................................................................................2111.0010000100

Generated: 06/08/2015 at 02:48 PM