ID:

dpe_521

 Coordinate:

scaffold_1:1448629-1448779 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-17.8 -17.7 -17.7

Flybase annnotation

CDS [Dper\GL19177-cds]; exon [dper_GLEANR_21319:11]; intron [Dper\GL19177-in]

No Repeatable elements found

mature
  1. scaffold_576:1164-1189 +
  2. dpe_521  scaffold_1:1448643-1448668 +
star
  1. scaffold_576:1256-1281 +
  2. dpe_521  scaffold_1:1448735-1448760 +

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GACCTGCTGTATCCGGAGAACAAACGAAAAATTAATATAATAAAGAAAACAAATTGAATCCATTTAAGGCAGTAAATGTAATAATCTATTTATTCTATTAATCTTTTCGGAGACGAAAAGAGCATCTAAATAAGTCGCGCCGTTGACTATTTATTCTTAACGAGTTTTGTACATTATTTCATTAATTTTTTACAGTCCCAGCCTCCAAACTCGCAATCTCAACTAAATCGGTATTCTCAAAGCACTATTGT
****************************************************************...(((((((((((........)))))))).......((((((((....))))))))((..((.....))..)))))...((((..(((....)))..))))................********************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 M021
embryo
 V042
embryo
....TGCTGTATCCGGAGAACAAACGAAAAAT........................................................................................................................................................................................................................... 28 0 2 22.50 45 16 29 0
................................................................TAAGGCAGTAAATGTAATAATCTATT................................................................................................................................................................. 26 0 2 7.50 15 14 0 1
....TGCTGTATCCGGAGAACAAACGAAAAA............................................................................................................................................................................................................................ 27 0 2 6.00 12 7 5 0
....TGCTGTATCCGGAGAACAAACGAAA.............................................................................................................................................................................................................................. 25 0 2 4.50 9 2 4 3
.....................................TAATAAAGAAAACAAATTGAATCCATT........................................................................................................................................................................................... 27 0 2 4.00 8 7 1 0
..........................................................................................TATTCTATTAATCTTTTCGGAGACGA....................................................................................................................................... 26 0 2 3.50 7 7 0 0
............................................................................................................................................................TTAACGAGTTTTGTACATTATTTCAT..................................................................... 26 0 2 3.00 6 6 0 0
.............................................................................................................................................................TAACGAGTTTTGTACATTATTTCAT..................................................................... 25 0 2 2.50 5 5 0 0
..........................................................................................TATTCTATTAATCTTTTCGGAGACGAAA..................................................................................................................................... 28 0 2 2.50 5 5 0 0
....TGCTGTATCCGGAGAACAAACGAAAA............................................................................................................................................................................................................................. 26 0 2 2.50 5 4 1 0
.....GCTGTATCCGGAGAACAAACGAAAAAT........................................................................................................................................................................................................................... 27 0 2 2.50 5 3 2 0
.........TATCCGGAGAACAAACGAAAAATTAATA...................................................................................................................................................................................................................... 28 0 2 2.00 4 1 3 0
.ACCTGCTGTATCCGGAGAACAAACGAAA.............................................................................................................................................................................................................................. 28 0 2 2.00 4 0 3 1
....TGCTGTATCCGGAGAACAAACGAAAAAA........................................................................................................................................................................................................................... 28 1 2 2.00 4 0 4 0
..CCTGCTGTATCCGGAGAACAAACGAA............................................................................................................................................................................................................................... 26 0 2 1.50 3 0 3 0
.ACCTGCTGTATCCGGAGAACAAACGA................................................................................................................................................................................................................................ 26 0 2 1.50 3 3 0 0
............................................................................................................................TCTAAATAAGTCGCGCCG............................................................................................................. 18 0 2 1.50 3 0 3 0
.........TATCCGGAGAACAAACGAAAAAT........................................................................................................................................................................................................................... 23 0 2 1.50 3 3 0 0
...............................................................................................TATTAATCTTTTCGGAGACGAAA..................................................................................................................................... 23 0 2 1.50 3 3 0 0
.......TGTATCCGGAGAACAAACGAAAAAT........................................................................................................................................................................................................................... 25 0 2 1.50 3 0 3 0
GACCTGCTGTATCCGGAGAACAAACGA................................................................................................................................................................................................................................ 27 0 2 1.50 3 3 0 0
..........................................................................................TATTCTATTAATCTTTTCGGAGACG........................................................................................................................................ 25 0 2 1.50 3 3 0 0
..CCTGCTGTATCCGGAGAACAAACGAAA.............................................................................................................................................................................................................................. 27 0 2 1.50 3 2 1 0
..............................................................................................................................TAAATAAGTCGCGCCGTTGACTATT.................................................................................................... 25 0 2 1.50 3 3 0 0
.........................................................................................................................GCATCTAAATAAGTCGCGCCGTTGAC........................................................................................................ 26 0 2 1.50 3 1 2 0
......................................................................................................................................TCGCGCCGTTGACTATTTATTCTTAACGA........................................................................................ 29 0 2 1.00 2 0 2 0
............................................................................................................GGAGACGAAAAGAGCATCTAAATAAGT.................................................................................................................... 27 0 2 1.00 2 1 1 0
..CCTGCTGTATCCGGAGAACAAACGA................................................................................................................................................................................................................................ 25 0 2 1.00 2 2 0 0
.....................................................TTGAATCCATTTAAGGCAGTAAATG............................................................................................................................................................................. 25 0 2 1.00 2 2 0 0
.............................................................................................TCTATTAATCTTTTCGGAGACGAA...................................................................................................................................... 24 0 2 1.00 2 2 0 0
............................................................................................................................TCTAAATAAGTCGCGCCGTTGACTAT..................................................................................................... 26 0 2 1.00 2 2 0 0
.......................................................................................................................................................TATTCTTAACGAGTTTTGTACATTATT......................................................................... 27 0 2 1.00 2 2 0 0
......................................................................................................................AGAGCATCTAAATAAGTCGCGCCGT............................................................................................................ 25 0 2 1.00 2 2 0 0
......TGCTATCCGGAGAACAAACGAAAAAT........................................................................................................................................................................................................................... 26 3 2 1.00 2 0 2 0
..............................................................................................................................TAAATAATTCGCGCCGTTGACTATT.................................................................................................... 25 1 2 1.00 2 0 2 0
.ACCTGCTGTATCCGGAGAACAAAC.................................................................................................................................................................................................................................. 24 0 2 1.00 2 1 0 1
.............................................................................................TCTATTAATCTTTTCGGAGACGA....................................................................................................................................... 23 0 2 1.00 2 2 0 0
...........TCCGGAGAACAAACGAAAAATTAATA...................................................................................................................................................................................................................... 26 0 2 1.00 2 2 0 0
.ACCTGCTGTATCCGGAGAACAAACGAAAA............................................................................................................................................................................................................................. 29 0 2 1.00 2 0 2 0
....TGCTGTATCCGGAGAACAAACGAA............................................................................................................................................................................................................................... 24 0 2 1.00 2 0 2 0
......CTGTATCCGGAGAACAAACGAAAA............................................................................................................................................................................................................................. 24 0 2 1.00 2 1 1 0
.............................................................................................TCTATTAATCTTTTCGGAGACGAAA..................................................................................................................................... 25 0 2 1.00 2 2 0 0
..............................................................................................................................TAAATAAGTCGCGCCGTTGACT....................................................................................................... 22 0 2 1.00 2 2 0 0
............................................................................................................................TCTAAATAAGTCGCGCCGTTG.......................................................................................................... 21 0 2 1.00 2 2 0 0
.....................................................................................................TCTTTTCGGAGACGAAAAGAGC................................................................................................................................ 22 0 2 1.00 2 1 0 1
..................................................................................................................................................................................................GTCCCAGCCTCCAAACTCGC..................................... 20 0 1 1.00 1 0 1 0
............................................................................................................GGAGACGAAAAGAGCATCTAAATAAG..................................................................................................................... 26 0 2 1.00 2 1 1 0
..........................................................................................TATTCTATTAATCTTTTCGGAGACGAA...................................................................................................................................... 27 0 2 1.00 2 2 0 0
.............................................................................................................................................................TAACGAGTTTTGTACATTATTTCATTAAT................................................................. 29 0 2 0.50 1 1 0 0
...........................................................................................................CGGAGACGAAAAGAGCATC............................................................................................................................. 19 0 2 0.50 1 0 1 0
............................................................................................TTCTATTAATCTTTTCGGAGACGA....................................................................................................................................... 24 0 2 0.50 1 1 0 0
...........TCCGGAGAGCAAACGAAAAATTAATAA..................................................................................................................................................................................................................... 27 2 2 0.50 1 1 0 0
...............................................................TTAAGGCAGTAAATGTAATAATCTATT................................................................................................................................................................. 27 0 2 0.50 1 1 0 0
..............................................................................................................................TAAATAAGTCGCGCCGTTGACTAT..................................................................................................... 24 0 2 0.50 1 1 0 0
...................................TATAATAACGAAAACAAATTGAATCCATT........................................................................................................................................................................................... 29 1 2 0.50 1 1 0 0
.............................................................................................................................................................TAACGAGTCTTGTACATTATTTCA...................................................................... 24 1 2 0.50 1 1 0 0
.....................................TAATAAAGCAAACAAATTGAATCCATT........................................................................................................................................................................................... 27 1 2 0.50 1 1 0 0
....................................................................................................................AAAGAGCATCTAAATAAGTCGCGCCG............................................................................................................. 26 0 2 0.50 1 1 0 0
.ACCTGCTGTATCCGGAGAACAAACG................................................................................................................................................................................................................................. 25 0 2 0.50 1 1 0 0
.........TATCCGGACAACAAACGAAAAATTAATA...................................................................................................................................................................................................................... 28 1 2 0.50 1 1 0 0
....TGCTGTATCCGGAGAACAACCGAAAAAT........................................................................................................................................................................................................................... 28 1 2 0.50 1 0 1 0
....................................................................................TCTATTTATTCTATTAATCTTTTCGGA............................................................................................................................................ 27 0 2 0.50 1 1 0 0
.........................................................................................................................GCATCTAAATAAGTCGCGCCGTTG.......................................................................................................... 24 0 2 0.50 1 1 0 0
................................TAATATAATAAAGAAAACAAATTGA.................................................................................................................................................................................................. 25 0 2 0.50 1 1 0 0
....TGCTGTATCCGGAGAACAAACAAAAAAT........................................................................................................................................................................................................................... 28 1 2 0.50 1 1 0 0
..........................................................TCCATTTAGGGCAGTAAATGTAATAATT..................................................................................................................................................................... 28 2 2 0.50 1 1 0 0
.....................................TAATAAAGGAAACAAATTGAATCCATT........................................................................................................................................................................................... 27 1 2 0.50 1 1 0 0
.......................................................................................................TTTTCGGAGACGAAAAGAGCATCTAA.......................................................................................................................... 26 0 2 0.50 1 1 0 0
.......................................................................................................................GAGCATCTAAATAAGTCGCGCC.............................................................................................................. 22 0 2 0.50 1 1 0 0
........................................TAAAGAAAACAAATTGAATCCATT........................................................................................................................................................................................... 24 0 2 0.50 1 1 0 0
......................................................................................................................AGAGCATCTAAATAAGTCGCGCC.............................................................................................................. 23 0 2 0.50 1 1 0 0
...........................................................CCATTTAAGGCAGTAAATGTAATAATC..................................................................................................................................................................... 27 0 2 0.50 1 1 0 0
....TGCTGTATTCGGAGAACAAACGAAAAA............................................................................................................................................................................................................................ 27 1 2 0.50 1 1 0 0
.......TGTATCCGGAGAACAAACGAAAA............................................................................................................................................................................................................................. 23 0 2 0.50 1 1 0 0
GACCTGCTGTATCCGGAGAACA..................................................................................................................................................................................................................................... 22 0 2 0.50 1 1 0 0
............................................................................................................................TCTAAATAAGTCGCGCCGT............................................................................................................ 19 0 2 0.50 1 1 0 0
...........................................................................................ATTCTATTAATCTTTTCGGAGACGA....................................................................................................................................... 25 0 2 0.50 1 1 0 0
.................................................................................TAATCTATTTATTCTATTAATCTTTTCGG............................................................................................................................................. 29 0 2 0.50 1 1 0 0
.........TATCCGGAGAACAAACGAAAAATTAAT....................................................................................................................................................................................................................... 27 0 2 0.50 1 0 1 0
......................................................TGAATCCATTTAAGGCAGTAAAT.............................................................................................................................................................................. 23 0 2 0.50 1 1 0 0
..........................................................................................TATTCTATTAATCTTTTCGGAGACGT....................................................................................................................................... 26 1 2 0.50 1 1 0 0
.........................................................................................................................................................TTCTTAACGAGTTTTGTACATTATT......................................................................... 25 0 2 0.50 1 1 0 0
.......................................................................................................................................CGCGCCGTTGACTATTTATTCTTAACGAC....................................................................................... 29 1 2 0.50 1 0 1 0
...........................................................CCATTTAAGGCAGTAAATGTAATAA....................................................................................................................................................................... 25 0 2 0.50 1 1 0 0
..ACCTCTGTATCCGGAGAACAAACGA................................................................................................................................................................................................................................ 25 3 2 0.50 1 1 0 0
........................................................................................................................AGCATCTAAATAAGTCGCGCCGTTG.......................................................................................................... 25 0 2 0.50 1 1 0 0
..CCTGCTGTATCCGGAGAACAAACGAAAAA............................................................................................................................................................................................................................ 29 0 2 0.50 1 0 1 0
...........................................................................................................................ATCTAAATAAGTCGCGCCGTTGACTA...................................................................................................... 26 0 2 0.50 1 1 0 0
............................................................................................................GGAGACGAAAAGAGCATCTAAAAA....................................................................................................................... 24 1 2 0.50 1 1 0 0
............................................................................................................................TCTAAATAAGTCGCGCCGTTGACTA...................................................................................................... 25 0 2 0.50 1 1 0 0
....TGCTGTATTCGGAGAACAAACGAAAA............................................................................................................................................................................................................................. 26 1 2 0.50 1 1 0 0
......................................................................................TATTTATTCTATTAATCTTTTCGGA............................................................................................................................................ 25 0 2 0.50 1 1 0 0
.......................................................................................................................................CGCGCCGTTGACTATTTATTCTTAACGA........................................................................................ 28 0 2 0.50 1 1 0 0
.........TATCCGGAGAACAAACGAAT.............................................................................................................................................................................................................................. 20 1 2 0.50 1 0 0 1
................................................................TAAGGCAGGAAATGTAATAATCTATT................................................................................................................................................................. 26 1 2 0.50 1 1 0 0
................................................................TAAGGCAGTAAATGTAAAA........................................................................................................................................................................ 19 1 2 0.50 1 1 0 0
................................TAATATAATAAAGAAAACAAATTGAAA................................................................................................................................................................................................ 27 1 2 0.50 1 1 0 0
.........................................................................................................TTCGGAGACGAAAAGAGCATCTAAA......................................................................................................................... 25 0 2 0.50 1 1 0 0
................................................................TAAGGCAGTAAATGTAATAATCTGTT................................................................................................................................................................. 26 1 2 0.50 1 1 0 0
....................................CTAATAAAGAAAACAAATTGAATCCATT........................................................................................................................................................................................... 28 1 2 0.50 1 1 0 0
...............................................................................................TATTAATCTTTTCGGAGACGAAAA.................................................................................................................................... 24 0 2 0.50 1 1 0 0
....TGCTGTATCCGGAGAACAA.................................................................................................................................................................................................................................... 19 0 2 0.50 1 1 0 0
.............................................................................................................................CTAAATAAGTCGCGCCGTTGACTAT..................................................................................................... 25 0 2 0.50 1 1 0 0
....TGCTGTATCCGGATAACAAACGAAAAAT........................................................................................................................................................................................................................... 28 1 2 0.50 1 1 0 0
.......................................................................................................................................CGCGCCGTTGACTATTTATTCTTAACG......................................................................................... 27 0 2 0.50 1 1 0 0
......................................................................................................................AGAGCATCTAAATAAGTCGCGCCG............................................................................................................. 24 0 2 0.50 1 1 0 0
.................................................................AAGGCAGTAAATGTAATAATCTAT.................................................................................................................................................................. 24 0 2 0.50 1 1 0 0
.............................................................................................................................................................TAACGAGTTTTGTACATTATTTCATTAA.................................................................. 28 0 2 0.50 1 1 0 0
.......................................................................................................................GAGCATCTAAATAAGTCGCGCCGT............................................................................................................ 24 0 2 0.50 1 1 0 0
...........................................................................................................................ATCTAAATAAGTCGCGCCGTTGAC........................................................................................................ 24 0 2 0.50 1 1 0 0
...........TCCGGAGAGCAAACGAAAAATTAA........................................................................................................................................................................................................................ 24 1 2 0.50 1 1 0 0
..........................................................................................TATTCTATTAATCTTTTCGGAGACGG....................................................................................................................................... 26 1 2 0.50 1 0 1 0
.ACCTGCTGTATCCGGAGAACAAACGAA............................................................................................................................................................................................................................... 27 0 2 0.50 1 1 0 0
GACCTGCTGTATCCGGAGAACAAACGAA............................................................................................................................................................................................................................... 28 0 2 0.50 1 1 0 0
........................................................................................TTTATTCTATTAATCTTTTCGGAGAC......................................................................................................................................... 26 0 2 0.50 1 1 0 0
......................................................................................................................AGAGCATCTAAATAAGTCGCGA............................................................................................................... 22 1 2 0.50 1 1 0 0
....................................................................................................................AAAGAGCATCTAAATAAGTCGCGCCGT............................................................................................................ 27 0 2 0.50 1 1 0 0
..............................................................................................................................GAAATAAGTCGCGCCGTTGACTATT.................................................................................................... 25 1 2 0.50 1 1 0 0
..................................................................................................................................TAAGTCGCGCCGTTGACTATTTATTC............................................................................................... 26 0 2 0.50 1 1 0 0
..............................................................................................................................TAAATAAGTCGCGCCGTTGAC........................................................................................................ 21 0 2 0.50 1 1 0 0
.....GCTGTATCCGGAGAACAAACGAAAA............................................................................................................................................................................................................................. 25 0 2 0.50 1 0 1 0
...............................................................................................TATTAATCGTTTCGGAGACGAAA..................................................................................................................................... 23 1 2 0.50 1 1 0 0
.......................................................................................................TTTTCGGAGACGAAAAGAGCATCTAAA......................................................................................................................... 27 0 2 0.50 1 1 0 0
..........................................................................................................TCGGAGACGGAAAGAGCATCT............................................................................................................................ 21 1 2 0.50 1 0 1 0
....TGCTGTATCCGGAGAACAAACGA................................................................................................................................................................................................................................ 23 0 2 0.50 1 1 0 0
..........ATCCGGAGAACAAACGAAAAATTAATA...................................................................................................................................................................................................................... 27 0 2 0.50 1 1 0 0
..............................................................TTTAAGGCAGTAAATGTAATAATCTATT................................................................................................................................................................. 28 0 2 0.50 1 1 0 0
.................................................................................TAATCTATTTATTCTATTAATCTTT................................................................................................................................................. 25 0 2 0.50 1 1 0 0
.......................................................................................................................GAGCATCTAAATAAGTCGCGCCGTTGA......................................................................................................... 27 0 2 0.50 1 1 0 0
......................................................TGAATCCATTTAAGGCAGTAAATG............................................................................................................................................................................. 24 0 2 0.50 1 1 0 0
...........................................................................................................CGGAGACGAAAAGAGCATCTAAAA........................................................................................................................ 24 1 2 0.50 1 1 0 0
.................................................................AAGGCAGTAAATGTAATAATCTA................................................................................................................................................................... 23 0 2 0.50 1 1 0 0
..............................................................TTTAAGGCAGTAAATGTAATAATCTAT.................................................................................................................................................................. 27 0 2 0.50 1 1 0 0
............................................................................................................................TCTAAATAAGTCGCGCCGTTGACT....................................................................................................... 24 0 2 0.50 1 1 0 0
...............................................AACAAATTGAATCCATTTAAGGCAG................................................................................................................................................................................... 25 0 2 0.50 1 1 0 0
.ACCTGCTGTATCCGGAGAACA..................................................................................................................................................................................................................................... 21 0 2 0.50 1 1 0 0
.............................................AAAACAAATTGAATCCATTTAAG....................................................................................................................................................................................... 23 0 2 0.50 1 1 0 0
..............................................................................................CTATTAATCTTTTCGGAGACGAA...................................................................................................................................... 23 0 2 0.50 1 1 0 0
.....................................................................................................................AAGAGCATCTAAATAAGTCGCGCCG............................................................................................................. 25 0 2 0.50 1 1 0 0
.........................................................................................TTATTCTATTAATCTTTTCG.............................................................................................................................................. 20 0 2 0.50 1 1 0 0
..................................................................................................................................TAAGTCGCGCCGTTGACTATTTATTCAA............................................................................................. 28 2 2 0.50 1 1 0 0
.............................................................................................................................................................TAACGAGTTTTGTACATTATTTCATT.................................................................... 26 0 2 0.50 1 1 0 0
........................................TAAAGAAAACAAATTGAATCCATTTAAG....................................................................................................................................................................................... 28 0 2 0.50 1 1 0 0
......................................AATAAAGAAAACAAATTGAATCCATT........................................................................................................................................................................................... 26 0 2 0.50 1 1 0 0
............................................................CATTTAAGGCAGTAAATGTAATAATC..................................................................................................................................................................... 26 0 2 0.50 1 1 0 0
................................................................TAAGGCAGTAAATGTAATAATCTATA................................................................................................................................................................. 26 1 2 0.50 1 1 0 0
......CTGTATCCTGAGAACAAACGAAAAAT........................................................................................................................................................................................................................... 26 1 2 0.50 1 0 1 0
..........................................................................................................................................................TCTTAACGAGTTTTGTACATTATTTCAA..................................................................... 28 1 2 0.50 1 1 0 0
............................................................................................................................TCTAAATAAGTCGCGCCGTTGA......................................................................................................... 22 0 2 0.50 1 1 0 0
.................................................................AAGGCAGTAAATGTAATAATCTATT................................................................................................................................................................. 25 0 2 0.50 1 1 0 0
......................................................................................TATTTATTCTATTAATCTTTTCTGAGACG........................................................................................................................................ 29 1 2 0.50 1 0 1 0
............................................................................................................................................................TTAACGAGTTTTGTACATTATTTCATT.................................................................... 27 0 2 0.50 1 1 0 0
....TGCTGTATCCGGAGAACAAA................................................................................................................................................................................................................................... 20 0 2 0.50 1 1 0 0
.......................................................................................ATTTATTCTATTAATCTTTTCGGAGA.......................................................................................................................................... 26 0 2 0.50 1 1 0 0
......................................................................................................................................TCGCGCCGTTGACTATTTATTCTTAACGG........................................................................................ 29 1 2 0.50 1 0 1 0

Anti-sense strand reads

CTGGACGACATAGGCCTCTTGTTTGCTTTTTAATTATATTATTTCTTTTGTTTAACTTAGGTAAATTCCGTCATTTACATTATTAGATAAATAAGATAATTAGAAAAGCCTCTGCTTTTCTCGTAGATTTATTCAGCGCGGCAACTGATAAATAAGAATTGCTCAAAACATGTAATAAAGTAATTAAAAAATGTCAGGGTCGGAGGTTTGAGCGTTAGAGTTGATTTAGCCATAAGAGTTTCGTGATAACA
*********************************************************************...(((((((((((........)))))))).......((((((((....))))))))((..((.....))..)))))...((((..(((....)))..))))................**************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V057
head
 M042
female body
 V042
embryo
 M021
embryo
 V050
head
...........................................................................................................GCCTCTGCTTTTCTCGTAGATTTATT...................................................................................................................... 26 0 2 0.50 1 0 1 0 0 0
...............................................................................................................................................ACTGATAAATAAGAATTGCTCAAA.................................................................................... 24 0 2 0.50 1 0 1 0 0 0
.....................................................................................................................TACTCGTAGATTTATCTAGCGC................................................................................................................ 22 3 2 0.50 1 1 0 0 0 0
.............................................TTTTGTTTAACTTAGGTAAAT......................................................................................................................................................................................... 21 0 2 0.50 1 0 0 0 1 0
........................................................................................................................................CGCGGCAACTGATAAATAAGA.............................................................................................. 21 0 2 0.50 1 0 0 1 0 0
.................................................................................................................................................................................AAGTAATAAAAAAATGTAAGG..................................................... 21 2 3 0.33 1 0 0 0 0 1
...GACGACACAGTCCTCTTGTT.................................................................................................................................................................................................................................... 20 2 5 0.20 1 1 0 0 0 0
..................................................................................................................................................................................AGTTATTAAGAAATGTCAGGT.................................................... 21 3 6 0.17 1 1 0 0 0 0
.............................................................................................................................GACTCATTCAGGGCGGCAA........................................................................................................... 19 3 8 0.13 1 0 0 0 0 1
.....................................................................................................................................................................................................AGGCGGAAGTTTGAGCGTTA.................................. 20 3 10 0.10 1 1 0 0 0 0
.............GCCTCTTATTTCCATTTTAA.......................................................................................................................................................................................................................... 20 3 15 0.07 1 0 0 1 0 0
.....CGACATGGGGCTCTTGTTA................................................................................................................................................................................................................................... 19 3 20 0.05 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_1:1448579-1448829 + dpe_521 GAC-------------CTGCTGTATCCGGAGAACAAACGAAAAATTAATATAATAAAGAAAACAAATTGAATCCATTTAAGGCAGTAAATGTAATAATCTATTTATTCTATTAATCTTTTCGGAGACGAAA-------------------------------------------------------------------------------AGAGCATCTAAATAAGTCGCGCCGTTGACTATTTATTCTTAACGAGTTTTGTACATTATTTCATTAATTT--TTTAC-AGT-------CCCAGCCTCCAAACTCGCAATCTCAACTAAATCGGTATTCTCAA---AGCACTATTGT
dp5 Unknown_group_3:144001-144272 + dps_1942 CAC-------------CTGCTGTATCCGGAGAACAAACGAAAAATTAATATAATAAAGAAAACAAATTGAATCCATTTCAGGCAGTAAATGTAATAATCTATTTATGCTATTAATTTTTTCGGAAACGACATTATCCAATATTGTACATAGCTGAGTGCTTTCTTGTTAAAAAAAAAACAATATTATTAACATAATTAATAATTAATTTA-------------------------------------------------------AAAAATTA---ATTT--TTTAC-AGT-------CCCAGCCTCCAAATTCGCAATCTCAACTAAATCGGTATTCTCAA---AGCACTATTGT
droWil2 scf2_1100000004967:2566348-2566385 - ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGTCCCAAGTAAATCGGTTACCCCAA---AACTCCACAGT
droVir3 scaffold_12963:14379828-14379897 - TTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCAG-TCTTC---AAACCAACCACAAAACCTACATTCGCCACAAAATCGGTTTTCACAA---AGCTCTTTAGC
droMoj3 scaffold_6500:31615586-31615670 + GTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATATTT---TATT--TCCAG-TCTACGACAAACCAACCACAAAACGTGCACTCACCCCAAAATCGTTTCTCACAA---AACTCATTAGT
droGri2 scaffold_15126:1631552-1631632 - ACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTTCT----ATT--TGTAG-TCTTC---TAACCAACCACAAAATTCGCATTCACCACAAAATCGATTTACACAA---AGCTCGTTAGC
droAna3 scaffold_12916:14246641-14246693 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCCCCCTAATACACAATCTCAGCAGAGTCGGTTTCCCCAA---ACATCAATCGT
droBip1 scf7180000396572:2726175-2726227 - ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCCCCCTAATACACAATCTCAGCAGAGTCGGTTTCCCCAA---ACTTCAATCGT
droKik1 scf7180000302472:2928483-2928573 - TAATATATTTTATAACTTGCTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-----------C---ATTTTT-ATT-------CTTAGCCCCCAAATTCGCAATCTCAACAAAATCGGTTTACTCAGCCTAGCTCTATAGT
droFic1 scf7180000453838:648863-648914 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCCTCCAAACACGCAATCTCAGCAGGCTCGGTTTACTCAG---AACTCGATAGT
droEle1 scf7180000491186:3513009-3513074 + TTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGA-TTC-------TTCAGCCTCCAAACACGCAATCTCAGCAGAGTCGGTTTACGCAG---AACTCGATAGT
droRho1 scf7180000778296:20489-20557 - TTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-----------TT---TTTTA-TTA-------TCCAGCCTTCAAACACGCAATCTCAGCAGAGTCGGTTCACCCAA---AACTCGATAGT
droBia1 scf7180000302422:8321881-8321958 + TTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATATAA---TTTT--TCCTC-TTT-------TCCAGCCTCCTAACACGCAATCTCAGCAGAGTAGGTTCACCCAA---AACTCGATAGT
droTak1 scf7180000415438:627772-627840 + TTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-----------TT---TTCTA-TTT-------TCCAGCCTCCAAACACGCAATCTCAACAGAGTCGGTTCACCCAG---AACTCTATAGT
droEug1 scf7180000409554:4514608-4514684 - ACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATATTA---ATT---TTGCG-TTT-------TTCAGCCTCCAAACACGCAATCTCAACAGAGTCGGTTCACCCAA---AATTCAATAGT
dm3 chr2L:10401785-10401853 + TAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-----------T---GTTTCG-ATT-------TCCAGCCTCCAAACACGCAATCTCAGCAGAATCGGTTTACACAG---AACTCGATAGT
droSim2 2l:10080810-10080875 + TTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCG-ATT-------TCTAGCCTCCAAACACGCAATCTCAGCAGAATCGGTTTTCACAG---AACTCGATAGT
droSec2 scaffold_3:5829731-5829810 + ACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATATCA---TATTTGTTTCG-ACT-------TCTAGCCTCCAAACACGCAATCTCAGCAGAATCGGTTTTCACAG---AACTCGATAGT
droYak3 2L:13082729-13082801 + ACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAT--------T---GTTTCGATTT-------TTCAGCCTCCAAACACGCAATCTCAGCAGAATCGGTTCCCACAG---AACTCGATAGT
droEre2 scaffold_4929:11011482-11011537 + T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCAGCCTCCAAACACGCAATCTCAGCAGAATCGGTTCACACAG---AACTCGATAGT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
GAC-------------CTGCTGTATCCGGAGAACAAACGAAAAATTAATATAATAAAGAAAACAAATTGAATCCATTTAAGGCAGTAAATGTAATAATCTATTTATTCTATTAATCTTTTCGGAGACGAAA-------------------------------------------------------------------------------AGAGCATCTAAATAAGTCGCGCCGTTGACTATTTATTCTTAACGAGTTTTGTACATTATTTCATTAATTT--TTTAC-AGT-------CCCAGCCTCCAAACTCGCAATCTCAACTAAATCGGTATTCTCAA---AGCACTATTGTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.................TGCTGTATCCGGAGAACAAACGAAAAAT.......................................................................................................................................................................................................................................................................................................................28222.504529160000
.............................................................................TAAGGCAGTAAATGTAATAATCTATT.............................................................................................................................................................................................................................................................2627.50150141000
.................TGCTGTATCCGGAGAACAAACGAAAAA........................................................................................................................................................................................................................................................................................................................2726.0012570000
.................TGCTGTATCCGGAGAACAAACGAAA..........................................................................................................................................................................................................................................................................................................................2524.509423000
..................................................TAATAAAGAAAACAAATTGAATCCATT.......................................................................................................................................................................................................................................................................................2724.008170000
.......................................................................................................TATTCTATTAATCTTTTCGGAGACGA...................................................................................................................................................................................................................................2623.507070000
........................................................................................................................................................................................................................................................TTAACGAGTTTTGTACATTATTTCAT..................................................................................2623.006060000
.........................................................................................................................................................................................................................................................TAACGAGTTTTGTACATTATTTCAT..................................................................................2522.505050000
.......................................................................................................TATTCTATTAATCTTTTCGGAGACGAAA-------------------------------------------------------------------------------..................................................................................................................................................2822.505050000
.................TGCTGTATCCGGAGAACAAACGAAAA.........................................................................................................................................................................................................................................................................................................................2622.505140000
..................GCTGTATCCGGAGAACAAACGAAAAAT.......................................................................................................................................................................................................................................................................................................................2722.505230000
......................TATCCGGAGAACAAACGAAAAATTAATA..................................................................................................................................................................................................................................................................................................................2822.004310000
.AC-------------CTGCTGTATCCGGAGAACAAACGAAA..........................................................................................................................................................................................................................................................................................................................2822.004301000
.................TGCTGTATCCGGAGAACAAACGAAAAAA.......................................................................................................................................................................................................................................................................................................................2822.004400000
..C-------------CTGCTGTATCCGGAGAACAAACGAA...........................................................................................................................................................................................................................................................................................................................2621.503300000
.AC-------------CTGCTGTATCCGGAGAACAAACGA............................................................................................................................................................................................................................................................................................................................2621.503030000
........................................................................................................................................................................................................................TCTAAATAAGTCGCGCCG..........................................................................................................................1821.503300000
......................TATCCGGAGAACAAACGAAAAAT.......................................................................................................................................................................................................................................................................................................................2321.503030000
............................................................................................................TATTAATCTTTTCGGAGACGAAA-------------------------------------------------------------------------------..................................................................................................................................................2321.503030000
....................TGTATCCGGAGAACAAACGAAAAAT.......................................................................................................................................................................................................................................................................................................................2521.503300000
GAC-------------CTGCTGTATCCGGAGAACAAACGA............................................................................................................................................................................................................................................................................................................................2721.503030000
.......................................................................................................TATTCTATTAATCTTTTCGGAGACG....................................................................................................................................................................................................................................2521.503030000
..C-------------CTGCTGTATCCGGAGAACAAACGAAA..........................................................................................................................................................................................................................................................................................................................2721.503120000
..........................................................................................................................................................................................................................TAAATAAGTCGCGCCGTTGACTATT.................................................................................................................2521.503030000
.....................................................................................................................................................................................................................GCATCTAAATAAGTCGCGCCGTTGAC.....................................................................................................................2621.503210000
..................................................................................................................................................................................................................................TCGCGCCGTTGACTATTTATTCTTAACGA.....................................................................................................2921.002200000
.........................................................................................................................GGAGACGAAA-------------------------------------------------------------------------------AGAGCATCTAAATAAGT.................................................................................................................................2721.002110000
..C-------------CTGCTGTATCCGGAGAACAAACGA............................................................................................................................................................................................................................................................................................................................2521.002020000
..................................................................TTGAATCCATTTAAGGCAGTAAATG.........................................................................................................................................................................................................................................................................2521.002020000
..........................................................................................................TCTATTAATCTTTTCGGAGACGAA..................................................................................................................................................................................................................................2421.002020000
........................................................................................................................................................................................................................TCTAAATAAGTCGCGCCGTTGACTAT..................................................................................................................2621.002020000
...................................................................................................................................................................................................................................................TATTCTTAACGAGTTTTGTACATTATT......................................................................................2721.002020000
..................................................................................................................................................................................................................AGAGCATCTAAATAAGTCGCGCCGT.........................................................................................................................2521.002020000
.AC-------------CTGCTGTATCCGGAGAACAAAC..............................................................................................................................................................................................................................................................................................................................2421.002011000
..........................................................................................................TCTATTAATCTTTTCGGAGACGA...................................................................................................................................................................................................................................2321.002020000
........................TCCGGAGAACAAACGAAAAATTAATA..................................................................................................................................................................................................................................................................................................................2621.002020000
.AC-------------CTGCTGTATCCGGAGAACAAACGAAAA.........................................................................................................................................................................................................................................................................................................................2921.002200000
.................TGCTGTATCCGGAGAACAAACGAA...........................................................................................................................................................................................................................................................................................................................2421.002200000
...................CTGTATCCGGAGAACAAACGAAAA.........................................................................................................................................................................................................................................................................................................................2421.002110000
..........................................................................................................TCTATTAATCTTTTCGGAGACGAAA-------------------------------------------------------------------------------..................................................................................................................................................2521.002020000
..........................................................................................................................................................................................................................TAAATAAGTCGCGCCGTTGACT....................................................................................................................2221.002020000
........................................................................................................................................................................................................................TCTAAATAAGTCGCGCCGTTG.......................................................................................................................2121.002020000
..................................................................................................................TCTTTTCGGAGACGAAA-------------------------------------------------------------------------------AGAGC.............................................................................................................................................2221.002011000
.................................................................................................................................................................................................................................................................................................GT-------CCCAGCCTCCAAACTCGC........................................2011.001100000
.........................................................................................................................GGAGACGAAA-------------------------------------------------------------------------------AGAGCATCTAAATAAG..................................................................................................................................2621.002110000
.......................................................................................................TATTCTATTAATCTTTTCGGAGACGAA..................................................................................................................................................................................................................................2721.002020000
.........................................................................................................................................................................................................................................................TAACGAGTTTTGTACATTATTTCATTAAT..............................................................................2920.501010000
........................................................................................................................CGGAGACGAAA-------------------------------------------------------------------------------AGAGCATC..........................................................................................................................................1920.501100000
.........................................................................................................TTCTATTAATCTTTTCGGAGACGA...................................................................................................................................................................................................................................2420.501010000
............................................................................TTAAGGCAGTAAATGTAATAATCTATT.............................................................................................................................................................................................................................................................2720.501010000
..........................................................................................................................................................................................................................TAAATAAGTCGCGCCGTTGACTAT..................................................................................................................2420.501010000
.................................................................................................................................AA-------------------------------------------------------------------------------AGAGCATCTAAATAAGTCGCGCCG..........................................................................................................................2620.501010000
.AC-------------CTGCTGTATCCGGAGAACAAACG.............................................................................................................................................................................................................................................................................................................................2520.501010000
.................................................................................................TCTATTTATTCTATTAATCTTTTCGGA........................................................................................................................................................................................................................................2720.501010000
.....................................................................................................................................................................................................................GCATCTAAATAAGTCGCGCCGTTG.......................................................................................................................2420.501010000
.............................................TAATATAATAAAGAAAACAAATTGA..............................................................................................................................................................................................................................................................................................2520.501010000
....................................................................................................................TTTTCGGAGACGAAA-------------------------------------------------------------------------------AGAGCATCTAA.......................................................................................................................................2620.501010000
...................................................................................................................................................................................................................GAGCATCTAAATAAGTCGCGCC...........................................................................................................................2220.501010000
.....................................................TAAAGAAAACAAATTGAATCCATT.......................................................................................................................................................................................................................................................................................2420.501010000
..................................................................................................................................................................................................................AGAGCATCTAAATAAGTCGCGCC...........................................................................................................................2320.501010000
........................................................................CCATTTAAGGCAGTAAATGTAATAATC.................................................................................................................................................................................................................................................................2720.501010000
....................TGTATCCGGAGAACAAACGAAAA.........................................................................................................................................................................................................................................................................................................................2320.501010000
GAC-------------CTGCTGTATCCGGAGAACA.................................................................................................................................................................................................................................................................................................................................2220.501010000
........................................................................................................................................................................................................................TCTAAATAAGTCGCGCCGT.........................................................................................................................1920.501010000
........................................................................................................ATTCTATTAATCTTTTCGGAGACGA...................................................................................................................................................................................................................................2520.501010000
..............................................................................................TAATCTATTTATTCTATTAATCTTTTCGG.........................................................................................................................................................................................................................................2920.501010000
......................TATCCGGAGAACAAACGAAAAATTAAT...................................................................................................................................................................................................................................................................................................................2720.501100000
...................................................................TGAATCCATTTAAGGCAGTAAAT..........................................................................................................................................................................................................................................................................2320.501010000
.......................................................................................................TATTCTATTAATCTTTTCGGAGACGT...................................................................................................................................................................................................................................2620.501010000
.....................................................................................................................................................................................................................................................TTCTTAACGAGTTTTGTACATTATT......................................................................................2520.501010000
...................................................................................................................................................................................................................................CGCGCCGTTGACTATTTATTCTTAACGAC....................................................................................................2920.501100000
........................................................................CCATTTAAGGCAGTAAATGTAATAA...................................................................................................................................................................................................................................................................2520.501010000
....................................................................................................................................................................................................................AGCATCTAAATAAGTCGCGCCGTTG.......................................................................................................................2520.501010000
..C-------------CTGCTGTATCCGGAGAACAAACGAAAAA........................................................................................................................................................................................................................................................................................................................2920.501100000
.......................................................................................................................................................................................................................ATCTAAATAAGTCGCGCCGTTGACTA...................................................................................................................2620.501010000
........................................................................................................................................................................................................................TCTAAATAAGTCGCGCCGTTGACTA...................................................................................................................2520.501010000
...................................................................................................TATTTATTCTATTAATCTTTTCGGA........................................................................................................................................................................................................................................2520.501010000
...................................................................................................................................................................................................................................CGCGCCGTTGACTATTTATTCTTAACGA.....................................................................................................2820.501010000
......................TATCCGGAGAACAAACGAAT..........................................................................................................................................................................................................................................................................................................................2020.501001000
.............................................TAATATAATAAAGAAAACAAATTGAAA............................................................................................................................................................................................................................................................................................2720.501010000
......................................................................................................................TTCGGAGACGAAA-------------------------------------------------------------------------------AGAGCATCTAAA......................................................................................................................................2520.501010000
............................................................................................................TATTAATCTTTTCGGAGACGAAA-------------------------------------------------------------------------------A.................................................................................................................................................2420.501010000
.................TGCTGTATCCGGAGAACAA................................................................................................................................................................................................................................................................................................................................1920.501010000
.........................................................................................................................................................................................................................CTAAATAAGTCGCGCCGTTGACTAT..................................................................................................................2520.501010000
...................................................................................................................................................................................................................................CGCGCCGTTGACTATTTATTCTTAACG......................................................................................................2720.501010000
..................................................................................................................................................................................................................AGAGCATCTAAATAAGTCGCGCCG..........................................................................................................................2420.501010000
..............................................................................AAGGCAGTAAATGTAATAATCTAT..............................................................................................................................................................................................................................................................2420.501010000
.........................................................................................................................................................................................................................................................TAACGAGTTTTGTACATTATTTCATTAA...............................................................................2820.501010000
...................................................................................................................................................................................................................GAGCATCTAAATAAGTCGCGCCGT.........................................................................................................................2420.501010000
.......................................................................................................................................................................................................................ATCTAAATAAGTCGCGCCGTTGAC.....................................................................................................................2420.501010000
.......................................................................................................TATTCTATTAATCTTTTCGGAGACGG...................................................................................................................................................................................................................................2620.501100000
.AC-------------CTGCTGTATCCGGAGAACAAACGAA...........................................................................................................................................................................................................................................................................................................................2720.501010000
GAC-------------CTGCTGTATCCGGAGAACAAACGAA...........................................................................................................................................................................................................................................................................................................................2820.501010000
.....................................................................................................TTTATTCTATTAATCTTTTCGGAGAC.....................................................................................................................................................................................................................................2620.501010000
..................................................................................................................................................................................................................AGAGCATCTAAATAAGTCGCGA............................................................................................................................2220.501010000
.................................................................................................................................AA-------------------------------------------------------------------------------AGAGCATCTAAATAAGTCGCGCCGT.........................................................................................................................2720.501010000
..............................................................................................................................................................................................................................TAAGTCGCGCCGTTGACTATTTATTC............................................................................................................2620.501010000
..........................................................................................................................................................................................................................TAAATAAGTCGCGCCGTTGAC.....................................................................................................................2120.501010000
..................GCTGTATCCGGAGAACAAACGAAAA.........................................................................................................................................................................................................................................................................................................................2520.501100000
....................................................................................................................TTTTCGGAGACGAAA-------------------------------------------------------------------------------AGAGCATCTAAA......................................................................................................................................2720.501010000
.................TGCTGTATCCGGAGAACAAACGA............................................................................................................................................................................................................................................................................................................................2320.501010000
.......................ATCCGGAGAACAAACGAAAAATTAATA..................................................................................................................................................................................................................................................................................................................2720.501010000
...........................................................................TTTAAGGCAGTAAATGTAATAATCTATT.............................................................................................................................................................................................................................................................2820.501010000
..............................................................................................TAATCTATTTATTCTATTAATCTTT.............................................................................................................................................................................................................................................2520.501010000
...................................................................................................................................................................................................................GAGCATCTAAATAAGTCGCGCCGTTGA......................................................................................................................2720.501010000
...................................................................TGAATCCATTTAAGGCAGTAAATG.........................................................................................................................................................................................................................................................................2420.501010000
........................................................................................................................CGGAGACGAAA-------------------------------------------------------------------------------AGAGCATCTAAAA.....................................................................................................................................2420.501010000
..............................................................................AAGGCAGTAAATGTAATAATCTA...............................................................................................................................................................................................................................................................2320.501010000
...........................................................................TTTAAGGCAGTAAATGTAATAATCTAT..............................................................................................................................................................................................................................................................2720.501010000
........................................................................................................................................................................................................................TCTAAATAAGTCGCGCCGTTGACT....................................................................................................................2420.501010000
............................................................AACAAATTGAATCCATTTAAGGCAG...............................................................................................................................................................................................................................................................................2520.501010000
.AC-------------CTGCTGTATCCGGAGAACA.................................................................................................................................................................................................................................................................................................................................2120.501010000
..........................................................AAAACAAATTGAATCCATTTAAG...................................................................................................................................................................................................................................................................................2320.501010000
...........................................................................................................CTATTAATCTTTTCGGAGACGAA..................................................................................................................................................................................................................................2320.501010000
..................................................................................................................................A-------------------------------------------------------------------------------AGAGCATCTAAATAAGTCGCGCCG..........................................................................................................................2520.501010000
......................................................................................................TTATTCTATTAATCTTTTCG..........................................................................................................................................................................................................................................2020.501010000
..............................................................................................................................................................................................................................TAAGTCGCGCCGTTGACTATTTATTCAA..........................................................................................................2820.501010000
.........................................................................................................................................................................................................................................................TAACGAGTTTTGTACATTATTTCATT.................................................................................2620.501010000
.....................................................TAAAGAAAACAAATTGAATCCATTTAAG...................................................................................................................................................................................................................................................................................2820.501010000
...................................................AATAAAGAAAACAAATTGAATCCATT.......................................................................................................................................................................................................................................................................................2620.501010000
.........................................................................CATTTAAGGCAGTAAATGTAATAATC.................................................................................................................................................................................................................................................................2620.501010000
.............................................................................TAAGGCAGTAAATGTAATAATCTATA.............................................................................................................................................................................................................................................................2620.501010000
......................................................................................................................................................................................................................................................TCTTAACGAGTTTTGTACATTATTTCAA..................................................................................2820.501010000
........................................................................................................................................................................................................................TCTAAATAAGTCGCGCCGTTGA......................................................................................................................2220.501010000
..............................................................................AAGGCAGTAAATGTAATAATCTATT.............................................................................................................................................................................................................................................................2520.501010000
........................................................................................................................................................................................................................................................TTAACGAGTTTTGTACATTATTTCATT.................................................................................2720.501010000
.................TGCTGTATCCGGAGAACAAA...............................................................................................................................................................................................................................................................................................................................2020.501010000
....................................................................................................ATTTATTCTATTAATCTTTTCGGAGA......................................................................................................................................................................................................................................2620.501010000
..................................................................................................................................................................................................................................TCGCGCCGTTGACTATTTATTCTTAACGG.....................................................................................................2920.501100000
dp5
CAC-------------CTGCTGTATCCGGAGAACAAACGAAAAATTAATATAATAAAGAAAACAAATTGAATCCATTTCAGGCAGTAAATGTAATAATCTATTTATGCTATTAATTTTTTCGGAAACGACATTATCCAATATTGTACATAGCTGAGTGCTTTCTTGTTAAAAAAAAAACAATATTATTAACATAATTAATAATTAATTTA-------------------------------------------------------AAAAATTA---ATTT--TTTAC-AGT-------CCCAGCCTCCAAATTCGCAATCTCAACTAAATCGGTATTCTCAA---AGCACTATTGTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.........................................................................................................................................AATATTGTACATAGCTGAGT.......................................................................................................................................................................................................2011.0010000001000
......................................................................................................................................................................................................................................................................................................................ATTCGCAATCTCAACTAAATCGGTA.....................2511.0010000001000
.....................................................................................................................TTTCGGAAACGACATTATCCA..........................................................................................................................................................................................................................2111.0010100000000
.....................................................................................................................................................................................................................................................................................................................................TAAATCGGTATTCTCAA---AGCA.......2111.0010100000000
droWil2
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGTCCCAAGTAAATCGGTTACCCCAA---AACTCCACAGTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....................................................................................................................................................................................................................................................................................................................................GTAAATCGGTTACCCCAA---AACTCCACAGT2911.00100010
......................................................................................................................................................................................................................................................................................................................................AAATCGGTTACCCCAA---AACTCCACA..2511.00101000
.....................................................................................................................................................................................................................................................................................................................................TAAATCGGTTACCCCAA---AACTCCACAGT2811.00101000
droVir3
TTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCAG-TCTTC---AAACCAACCACAAAACCTACATTCGCCACAAAATCGGTTTTCACAA---AGCTCTTTAGCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............................................................................................................................................................................................................................................................................................................................ATTCGCCACAAAATCGGTTTTCACAA---A..........2711.001000000000000000000000000000001000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................AACCACAAAACCTACATTCGCCACA..............................2511.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................GGTTTTCACAA---AGCTCTTTA..2011.001000000000000001000000000000000000000000000000000000000000000000
droMoj3
GTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATATTT---TATT--TCCAG-TCTACGACAAACCAACCACAAAACGTGCACTCACCCCAAAATCGTTTCTCACAA---AACTCATTAGTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..................................................................................................................................................................................................................................................................................................................CAAAACGTGCACTCACCCC...............................1911.001100000
droGri2
ACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTTCT----ATT--TGTAG-TCTTC---TAACCAACCACAAAATTCGCATTCACCACAAAATCGATTTACACAA---AGCTCGTTAGCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..........................................................................................................................................................................................................................................................................................................ACCAACCACAAAATTCGCA.......................................1911.00110
droAna3
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCCCCCTAATACACAATCTCAGCAGAGTCGGTTTCCCCAA---ACATCAATCGTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCCCCCTAATACACAATCTCAGCAGAGTCGGTTTCCCCAA---ACTTCAATCGTSizeHit CountTotal NormTotal
No Reads
droKik1
TAATATATTTTATAACTTGCTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-----------C---ATTTTT-ATT-------CTTAGCCCCCAAATTCGCAATCTCAACAAAATCGGTTTACTCAGCCTAGCTCTATAGTSizeHit CountTotal NormTotal
No Reads
droFic1
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCCTCCAAACACGCAATCTCAGCAGGCTCGGTTTACTCAG---AACTCGATAGTSizeHit CountTotal NormTotal
No Reads
droEle1
TTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGA-TTC-------TTCAGCCTCCAAACACGCAATCTCAGCAGAGTCGGTTTACGCAG---AACTCGATAGTSizeHit CountTotal NormTotal
No Reads
droRho1
TTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-----------TT---TTTTA-TTA-------TCCAGCCTTCAAACACGCAATCTCAGCAGAGTCGGTTCACCCAA---AACTCGATAGTSizeHit CountTotal NormTotal
No Reads
droBia1
TTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATATAA---TTTT--TCCTC-TTT-------TCCAGCCTCCTAACACGCAATCTCAGCAGAGTAGGTTCACCCAA---AACTCGATAGTSizeHit CountTotal NormTotal
No Reads
droTak1
TTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-----------TT---TTCTA-TTT-------TCCAGCCTCCAAACACGCAATCTCAACAGAGTCGGTTCACCCAG---AACTCTATAGTSizeHit CountTotal NormTotal
No Reads
droEug1
ACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATATTA---ATT---TTGCG-TTT-------TTCAGCCTCCAAACACGCAATCTCAACAGAGTCGGTTCACCCAA---AATTCAATAGTSizeHit CountTotal NormTotal
No Reads
dm3
TAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-----------T---GTTTCG-ATT-------TCCAGCCTCCAAACACGCAATCTCAGCAGAATCGGTTTACACAG---AACTCGATAGTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
......................................................................................................................................................................................................................................................................................................................................GAATCGGTTTACACAG---AAC........19118.00180000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007030800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................AATCGGTTTACACAG---AAC........18114.00140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007011500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................GAATCGGTTTACACAG---AACTC......2118.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000320300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................TTACACAG---AACTCGATAGT1918.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200400000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................AATCGGTTTACACAG---AACT.......1917.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002210200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................ATCGGTTTACACAG---AACT.......1816.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002100300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................GAATCGGTTTACACAG---AACT.......2015.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................AATCTCAGCAGAATCGGTTT....................2015.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005
...............................................................................................................................................................................................................................................................................................................................................TACACAG---AACTCGATAGT1815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000210200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................GAATCGGTTTACACAG---AACTCGA....2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................ACGCAATCTCAGCAGAATCGGTTT....................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................CAAACACGCAATCTCAGCAGAATCGGT......................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................CTCAGCAGAATCGGTTTACACAG---AAC........2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................GTTTACACAG---AACTCGATAGT2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................AATCGGTTTACACAG---AACTC......2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................AATCGGTTTACACAG---AACTCGA....2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................GCAGAATCGGTTTACACAG---AACTCGA....2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................CAGAATCGGTTTACACAG---AACT.......2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000001000000
................................................................................................................................................................................................................................................................................................................................TCAGCAGAATCGGTTTACACAG---AACT.......2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000100000
......................................................................................................................................................................................................................................................................................................................ACACGCAATCTCAGCAGAATCG........................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000010
.......................................................................................................................................................................................................................................................................................................................CACGCAATCTCAGCAGAATCGGTT.....................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................TCTCAGCAGAATCGGTTTACACAG---AACT.......2812.0020000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
................................................................................................................................................................................................................................................................................................................................TCAGCAGAATCGGTTTACACAG---AACTC......2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................ATCGGTTTACACAG---AACTC......1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................AGAATCGGTTTACACAG---AAC........2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................TTTACACAG---AACTCGATAGT2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................AGAATCGGTTTACACAG---AACT.......2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-----------T---GTTTCG-ATT-------TCCAG.....................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................CAATCTCAGCAGAATCGGTTTACACAG---C..........2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................GCAATCTCAGCAGAATCGGTT.....................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
........................................................................................................................................................................................................................................................................................................................................ATCGGTTTACACAG---AACTCGA....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................CTCCAAACACGCAATCTCAGCAGAAT..........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................TTTACACAG---AACTCGATAG.1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................AGCAGAATCGGTTTACACAG---AACTC......2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................CAGCAGAATCGGTTTACACAG---...........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................TCGGTTTACACAG---AACTCGATAGT2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................GCAGAATCGGTTTACACAG---...........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................AATCTCAGCAGAATCGGTTTACAC................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................CTCCAAACACGCAATCTCAGCAG.............................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................ATCTCAGCAGAATCGGTTTACACAG---AA.........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
....................................................................................................................................................................................................................................................................................................................................CAGAATCGGTTTACACAG---AA.........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................TCTCAGCAGAATCGGTTTACACAG---AAC........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................GAATCGGTTTACACAG---AACTCGAT...2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................TCCAAACACGCAATCTCAGCAGAATCGG.......................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................TCAGCAGAATCGGTTTACACAG---AACTCG.....2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCG-ATT-------TCTAGCCTCCAAACACGCAATCTCAGCAGAATCGGTTTTCACAG---AACTCGATAGTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................................................................................................................................................................................................................................................................................................................................GTTTTCACAG---AACTCGATAGT2113.00300300000000000000
................................................................................................................................................................................................................................................................................................................................TCAGCAGAATCGGTTTTCACAG---AAC........2511.00100000000000001000
............................................................................................................................................................................................................................................................................................................................AATCTCAGCAGAATCGGTTTTCA.................2311.00100000001000000000
..............................................................................................................................................................................................................................................................................................................................TCTCAGCAGAATCGGTTTTCACAG---AAC........2711.00100000000010000000
........................................................................................................................................................................................................................................................................................................................................ATCGGTTTTCACAG---AACTCGA....2111.00110000000000000000
droSec2
ACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATATCA---TATTTGTTTCG-ACT-------TCTAGCCTCCAAACACGCAATCTCAGCAGAATCGGTTTTCACAG---AACTCGATAGTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.................................................................................................................................................................................................................................................................................................................................CAGCAGAATCGGTTTTCACAG---...........2111.0010100
...............................................................................................................................................................................................................................................................................................................................CTCAGCAGAATCGGTTTTCACAG---AAC........2611.0010010
..........................................................................................................................................................................................................................................................................................................................GCAATCTCAGCAGAATCGGT......................2011.0011000
droYak3
ACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAT--------T---GTTTCGATTT-------TTCAGCCTCCAAACACGCAATCTCAGCAGAATCGGTTCCCACAG---AACTCGATAGTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................................................................................................................................................................................................................................................................................................................................GTTCCCACAG---AACTCGATAGT2111.00101000000000
droEre2
T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCAGCCTCCAAACACGCAATCTCAGCAGAATCGGTTCACACAG---AACTCGATAGTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..............................................................................................................................................................................................................................................................................................................................................TCACACAG---AACTCGATAGT1911.0010100000
....................................................................................................................................................................................................................................................................................................................AAACACGCAATCTCAGCAGAATCGGTC.....................2711.0010100000
............................................................................................................................................................................................................................................................................................................................AATCTCAGCAGAATCGGTT.....................1911.0010000100

Generated: 06/08/2015 at 02:52 PM