ID:

dpe_520

 Coordinate:

scaffold_1:1448280-1448430 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-1.7 -1.6 -1.1

Flybase annnotation

exon [dper_GLEANR_21319:10]; CDS [Dper\GL19177-cds]; intron [Dper\GL19177-in]

No Repeatable elements found

mature
  1. scaffold_576:823-849 +
  2. dpe_520  scaffold_1:1448302-1448328 +
star
  1. scaffold_576:858-885 +
  2. dpe_520  scaffold_1:1448337-1448364 +

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CGAAATCGCAAATTCAAAAGCAAAGGTTAATTGGAATGTTTGAAACTTTGGTAAGTCTTATTCTTTTAAAGTTCAAGTTTCAGATTCGTAGATTCAACTTACAGAAGAAAGCATTACCAACCTTAGATGACAAGCATAGATTCGAAAGGAACGAGTGAAATATCATTTTTTTTTTATCCGTAAACGAAAATAGTCACTCAGGCAGGATCAGGCAGAAACTATAGTCACTTTTTTTGTACAGAAACTCTAGC
************************************************************************....((((....(((((((.......)))).)))..)))).......................******************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 M021
embryo
........................................................................TCAAGTTTCAGATTCGTAGATTCAACT........................................................................................................................................................ 27 0 2 3.50 7 3 4
.............TCAAAAGCAAAGGTTAATTGGAATGTT................................................................................................................................................................................................................... 27 0 2 3.00 6 6 0
..................................................................TAAAGTTCAAGTTTCAGATTCGTAGATT............................................................................................................................................................. 28 0 2 3.00 6 0 6
.........................................................................CAAGTTTCAGATTCGTAGATTCAACT........................................................................................................................................................ 26 0 2 2.50 5 0 5
.......................................................................TTCAAGTTTCAGATTCGTAGATTCAACT........................................................................................................................................................ 28 0 2 2.00 4 0 4
..........................TTAATTGGAATGTTTGAAACTTTGG........................................................................................................................................................................................................ 25 0 2 1.50 3 3 0
............TTCAAAAGCAAAGGTTAATTGGAA....................................................................................................................................................................................................................... 24 0 2 1.00 2 2 0
...................................................................AAAGTTCAAGTTTCAGATTCGTAGATT............................................................................................................................................................. 27 0 2 1.00 2 0 2
...........................TAATTGGAATGTTTGAAACTTTGG........................................................................................................................................................................................................ 24 0 2 1.00 2 2 0
................................................................................CAGATTCGTAGATTCAACT........................................................................................................................................................ 19 0 2 1.00 2 0 2
..............................................................................TTCAGATTCGTAGATTCAACTTACA.................................................................................................................................................... 25 0 2 1.00 2 2 0
.............TCAAAAGCAAAGGTTAATTGGAA....................................................................................................................................................................................................................... 23 0 2 1.00 2 2 0
.................................................................................................................TTACCAACCTTAGATGACAAGCATAGAA.............................................................................................................. 28 1 2 0.50 1 1 0
................................................................................................................................................................................TCCGTAAACGAAAATAGTCACTCAGGC................................................ 27 0 2 0.50 1 1 0
...............................................................................TCAGATTCGTAGATTCAACTTACAGA.................................................................................................................................................. 26 0 2 0.50 1 1 0
...........................................................................................................................................................................................................................TATAGTCACTTTTTTTGTACAGAAAC...... 26 0 2 0.50 1 1 0
..............CAAAAGCAAAGGTTAATTGGAATGTT................................................................................................................................................................................................................... 26 0 2 0.50 1 1 0
...........................................................................................................AAAGCATTACCAACCTTAGATGACAAGC.................................................................................................................... 28 0 2 0.50 1 1 0
.............TCAAAAGCAAAGGTTAATTGGAATGT.................................................................................................................................................................................................................... 26 0 2 0.50 1 1 0
............................................................................................................................................TTCGAAAGGAACGAGTGAAATATCAT..................................................................................... 26 0 2 0.50 1 1 0
................AAAGCAAAGGTTAATTGGAATGTTTG................................................................................................................................................................................................................. 26 0 2 0.50 1 1 0
........................................TGAAACTTTGGTAAGTCTTATT............................................................................................................................................................................................. 22 0 2 0.50 1 1 0
........................................................................TCAAGTTTCAGATTCGTAGATTCCACT........................................................................................................................................................ 27 1 2 0.50 1 0 1
............TTCAAAAGCAAAGGTTAATTGGAATGT.................................................................................................................................................................................................................... 27 0 2 0.50 1 1 0
...................GCAAAGGTTAATTGGAATGTTTGAAACT............................................................................................................................................................................................................ 28 0 2 0.50 1 1 0
...............................................................................................................CATTACCAACCTTAGATGACAAGCATAG................................................................................................................ 28 0 2 0.50 1 1 0
...............................................................................TCAGATTCGTAGATTCAACTTACAGAAG................................................................................................................................................ 28 0 2 0.50 1 1 0
.............................................................................TTTCAGATTCGTAGATTCAACTTACAA................................................................................................................................................... 27 1 2 0.50 1 1 0
.....................AAAGGTTAATTGGAATGTTTGAAA.............................................................................................................................................................................................................. 24 0 2 0.50 1 1 0
.......................................................................TTCAAGTTTCAGATTCGTAGATTCAAC......................................................................................................................................................... 27 0 2 0.50 1 1 0
..................................................................................................................TACCAACCTTAGATGACAAGCA................................................................................................................... 22 0 2 0.50 1 1 0
..............................TTGGAATGTTTGAAACTTTGG........................................................................................................................................................................................................ 21 0 2 0.50 1 1 0
.....................................................................................TCGTAGATTCAACTTACAGAAG................................................................................................................................................ 22 0 2 0.50 1 1 0
...............................................................................TCAGATTCGTAGATTCAACTTACA.................................................................................................................................................... 24 0 2 0.50 1 1 0
...............................................................................................................................TGACAAGCATAGATTCGAAAG....................................................................................................... 21 0 2 0.50 1 1 0
.................................................................................................................................................................................................TCACTCAGGCAGGATCAGGCAGAA.................................. 24 0 2 0.50 1 1 0
...................................................................................................TACAGAAGAAAGCATTACCAACCTTAGA............................................................................................................................ 28 0 2 0.50 1 1 0
................................................................................................................................................................TATCATTTTTTTTTTATCCGTAAACG................................................................. 26 0 2 0.50 1 1 0
..AAATCGCAAATTCAAAAGCAAAGGT................................................................................................................................................................................................................................ 25 0 2 0.50 1 1 0
.......................................................................................................GAAGAAAGCATTACCAACCTTAGATGA......................................................................................................................... 27 0 2 0.50 1 1 0
.....TCGCAAATTCAAAAGCAAAGGTTAATT........................................................................................................................................................................................................................... 27 0 2 0.50 1 1 0
.............................................................................................................................................................................................................................TAGTCACTTTTTTTGTACAGAAACTC.... 26 0 2 0.50 1 1 0
.....TCGCAAATTCAAAAGCAAAGGTTAATTG.......................................................................................................................................................................................................................... 28 0 2 0.50 1 1 0
............................................................................................TTCAACTTACAGAAGAAAGCATTAC...................................................................................................................................... 25 0 2 0.50 1 1 0
.............TCAAAAGCGAAGGTTAATTGGAATGTT................................................................................................................................................................................................................... 27 1 2 0.50 1 1 0
............TTCAAAAGCAAAGGTTAATTGGAATGTT................................................................................................................................................................................................................... 28 0 2 0.50 1 1 0
...........................................................................................................AAAGCATTTCCAACCTTAGATGACAA...................................................................................................................... 26 1 2 0.50 1 1 0
.............................................................................................................................................................................................ATAGTCACTCAGGCAGGATCA......................................... 21 0 2 0.50 1 1 0
.....................................................................................TCGTAGATTCAACTTACAGAAGAAAG............................................................................................................................................ 26 0 2 0.50 1 1 0
..........................................................................................................GAAAGCATTACCAACCTTAGATGACAA...................................................................................................................... 27 0 2 0.50 1 1 0
..................................................................................................................................CAAGCATAGATTCGAAAGGAACGAG................................................................................................ 25 0 2 0.50 1 1 0
.........AAATTCAAAAGCAAAGGTTAATTGGAA....................................................................................................................................................................................................................... 27 0 2 0.50 1 1 0
..........................................................................................................................................................................................................CAGGATCAGGCAGAAACTATAGTCACTT..................... 28 0 2 0.50 1 1 0
...............................................................................................................................................................................................................TCAGGCAGAAACTATAGTCAC....................... 21 0 2 0.50 1 1 0
..........................................................................................................................................................................................................................CTTGAGTCACTTTTTTTG............... 18 2 20 0.25 5 0 5

Anti-sense strand reads

GCTTTAGCGTTTAAGTTTTCGTTTCCAATTAACCTTACAAACTTTGAAACCATTCAGAATAAGAAAATTTCAAGTTCAAAGTCTAAGCATCTAAGTTGAATGTCTTCTTTCGTAATGGTTGGAATCTACTGTTCGTATCTAAGCTTTCCTTGCTCACTTTATAGTAAAAAAAAAATAGGCATTTGCTTTTATCAGTGAGTCCGTCCTAGTCCGTCTTTGATATCAGTGAAAAAAACATGTCTTTGAGATCG
********************************************************************************************************************....((((....(((((((.......)))).)))..)))).......................************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 V042
embryo
...............................................................................................................................................................................TAGGCATTTGCTTTTATCAGT....................................................... 21 0 2 0.50 1 1 0
.............................................................................................................................CTACTGTTCGTATCTAAGCTTTCCT..................................................................................................... 25 0 2 0.50 1 1 0
..............................................................................................................................................................................................ATCAGTGAGTCCGTCCTAGT......................................... 20 0 2 0.50 1 1 0
..................................................................................................................................GTTCGTATCTAAGCTTTCCTTGCT................................................................................................. 24 0 2 0.50 1 1 0
....................................................................................................................................TCGTATCTAAGCTTTCCTGGCTCACTT............................................................................................ 27 1 2 0.50 1 1 0
.....................................................................................................................................................................................................AGTCCGTCCTAGTCCGTCTTT................................. 21 0 2 0.50 1 1 0
..............................................................................................................CGTAATGGTTGGAATCTACT......................................................................................................................... 20 0 2 0.50 1 1 0
....................................................................................................................................................................................................................................AAAAAAAAATGGCGTTGAGAT.. 21 3 13 0.08 1 1 0
.......................................................................................................................................................................................................................TTTGATATCAGTATAAAATAC............... 21 3 19 0.05 1 1 0
.......................................................................................................................................................................................................GCCGTCCTAGTGCGTCTTA................................. 19 3 20 0.05 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_1:1448230-1448480 + dpe_520 CG------AAATCGCAAATTCAAAAGCAAAGGTTAATTGGAATGTTTGAAACTTTGGTAAGTCTTATTCTTTT---AAAGTTCAAGTTTCAGATTCGTAGATTCAACTTACAGAAGAAAGCATTACCAACCTTAGATGACAAGCATAGATTCGAAAGGAACGAGTGAAATATCATTTTTTTTTTATCCGTAAACGAAAATAGTCACTCAGGCAGGATCAGGCAGAAACTATAGTCACTTTTTTTGTACAGAAACTCTAGC
dp5 Unknown_group_3:143786-143902 + AT------A-------GATTC-------------GAAAGGAACGAGTGAAATATT-ATATATTT--TTT-----------------------------------------------------------------------------------------------------------------CTACCCGTAAACGAAAA-AGTCACTCAGGCAGGATCAGGCAGAAACTATACTCAATTTTTTGGTAAAGAAACTCTAGC
droVir3 scaffold_12963:14379943-14380001 - CA-----ACAATCGCTGATGCAGAAACAAAGGCTTATGGGAAATTTCGATAAAACAGTAAGCTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6500:31590881-31590942 + CC----AACAAGCGCAATTACAGAAACAGAGGTTCATGGCAAATTTTGAAAAAACAGTGAGTAC--TA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15126:1631670-1631728 - CA-----ACAGTCGCAATTGCAGAAACAGAGGTTAATGGGAGCCTTTGATAAAACAGTAAGTTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_12916:14246525-14246582 + CG------CAACAGCAGCCTCAGAAACAAAGGCTGATGGGAATGTTCGAAAATATGGTATGTTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396572:2726287-2726344 - CG------CAACAGCAGCCTCAAAAACAAAGGATGATGGGAATGTTTGAAAATATGGTTAGTTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302472:2928593-2928651 - CA------CAACAGCAGCCTCAGAAGCAGAGGCTGATGGGAATGTTTGAAAATCTGGTGAGTTT--T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000453838:648755-648810 + CA------CAACAGCAAGCTCAAAAGCAGAGGATGATGGGAATGTTTGAAAATTTGGTGAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491186:3512907-3512979 + CA------CAACAGCAACCTCAAAAGCAGAGGATGATGGGAATGTTTGAAAACTTGGTAAGTTT--TCTATTTTTTAAAG--------------------------------------------T---------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000778296:20599-20671 - CA------CAACAGCAACCTCAAAAGCAGAGGATGATGGGAATGTTTGAAAATTTGGTAAGTTA--TTTTCATAATATTT--------------------------------------------A---------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000302422:8321777-8321842 + CA------CAACAGCAGCCTCAGAAGCAGAGGATGATGGGAATGTTTGAAAATCTGGTAAGTTA--TTCCTTC---A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000415438:627686-627738 + CA------CAACAGCAGCCTCAAAA---GAGGATGATGGGAATGTTTGAAAATCTGGTAAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409554:4514679-4514783 - CA------CAACAGCAGCCTCAAAAGCCGAGGATGATGGGAATGTTTGAAAATCTGGTATGTTA--TTGTTTC---A---------CTTTGGGGTAATGCCCATAACTTAGAAAAACAAACATTA---------------------------------------------------------------------------------------------------------------------------------------
dm3 chr2L:10401695-10401745 + AG------CAACAGCAA---CAAAAGCAGAGAATGATGGGAATGTATGAATTTATGGTAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 2l:10080709-10080767 + CTC-GCAGCAGCAGCAACAACAAAAGCAGAGAATGATGGGAATGTATGAATTTATGGTAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_3:5829645-5829704 + CGCAGCAGCAGCAGCAGCAACAAAAGCAGAGAATGATGGGAATGTATGAATTTATGGTAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 2L:13082638-13082691 + CG------CAGCAGCAGCAACATAAGCAGAGAATGATGGGAATGTATGAATTTATGGTAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4929:11011374-11011427 + CG------CAGCAGCAGCAACAAAAGCAGAGGATGATGGGAATGTATGAATTTATGGTAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
CG------AAATCGCAAATTCAAAAGCAAAGGTTAATTGGAATGTTTGAAACTTTGGTAAGTCTTATTCTTTT---AAAGTTCAAGTTTCAGATTCGTAGATTCAACTTACAGAAGAAAGCATTACCAACCTTAGATGACAAGCATAGATTCGAAAGGAACGAGTGAAATATCATTTTTTTTTTATCCGTAAACGAAAATAGTCACTCAGGCAGGATCAGGCAGAAACTATAGTCACTTTTTTTGTACAGAAACTCTAGCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.................................................................................TCAAGTTTCAGATTCGTAGATTCAACT........................................................................................................................................................2723.507430000
...................TCAAAAGCAAAGGTTAATTGGAATGTT......................................................................................................................................................................................................................2723.006060000
........................................................................T---AAAGTTCAAGTTTCAGATTCGTAGATT.............................................................................................................................................................2823.006600000
..................................................................................CAAGTTTCAGATTCGTAGATTCAACT........................................................................................................................................................2622.505500000
................................................................................TTCAAGTTTCAGATTCGTAGATTCAACT........................................................................................................................................................2822.004400000
................................TTAATTGGAATGTTTGAAACTTTGG...........................................................................................................................................................................................................2521.503030000
..................TTCAAAAGCAAAGGTTAATTGGAA..........................................................................................................................................................................................................................2421.002020000
............................................................................AAAGTTCAAGTTTCAGATTCGTAGATT.............................................................................................................................................................2721.002200000
.................................TAATTGGAATGTTTGAAACTTTGG...........................................................................................................................................................................................................2421.002020000
.........................................................................................CAGATTCGTAGATTCAACT........................................................................................................................................................1921.002200000
.......................................................................................TTCAGATTCGTAGATTCAACTTACA....................................................................................................................................................2521.002020000
...................TCAAAAGCAAAGGTTAATTGGAA..........................................................................................................................................................................................................................2321.002020000
..........................................................................................................................TTACCAACCTTAGATGACAAGCATAGAA..............................................................................................................2820.501010000
.........................................................................................................................................................................................TCCGTAAACGAAAATAGTCACTCAGGC................................................2720.501010000
........................................................................................TCAGATTCGTAGATTCAACTTACAGA..................................................................................................................................................2620.501010000
....................................................................................................................................................................................................................................TATAGTCACTTTTTTTGTACAGAAAC......2620.501010000
....................CAAAAGCAAAGGTTAATTGGAATGTT......................................................................................................................................................................................................................2620.501010000
....................................................................................................................AAAGCATTACCAACCTTAGATGACAAGC....................................................................................................................2820.501010000
...................TCAAAAGCAAAGGTTAATTGGAATGT.......................................................................................................................................................................................................................2620.501010000
.....................................................................................................................................................TTCGAAAGGAACGAGTGAAATATCAT.....................................................................................2620.501010000
......................AAAGCAAAGGTTAATTGGAATGTTTG....................................................................................................................................................................................................................2620.501010000
..............................................TGAAACTTTGGTAAGTCTTATT................................................................................................................................................................................................2220.501010000
..................TTCAAAAGCAAAGGTTAATTGGAATGT.......................................................................................................................................................................................................................2720.501010000
.........................GCAAAGGTTAATTGGAATGTTTGAAACT...............................................................................................................................................................................................................2820.501010000
........................................................................................................................CATTACCAACCTTAGATGACAAGCATAG................................................................................................................2820.501010000
........................................................................................TCAGATTCGTAGATTCAACTTACAGAAG................................................................................................................................................2820.501010000
......................................................................................TTTCAGATTCGTAGATTCAACTTACAA...................................................................................................................................................2720.501010000
...........................AAAGGTTAATTGGAATGTTTGAAA.................................................................................................................................................................................................................2420.501010000
................................................................................TTCAAGTTTCAGATTCGTAGATTCAAC.........................................................................................................................................................2720.501010000
...........................................................................................................................TACCAACCTTAGATGACAAGCA...................................................................................................................2220.501010000
....................................TTGGAATGTTTGAAACTTTGG...........................................................................................................................................................................................................2120.501010000
..............................................................................................TCGTAGATTCAACTTACAGAAG................................................................................................................................................2220.501010000
........................................................................................TCAGATTCGTAGATTCAACTTACA....................................................................................................................................................2420.501010000
........................................................................................................................................TGACAAGCATAGATTCGAAAG.......................................................................................................2120.501010000
..........................................................................................................................................................................................................TCACTCAGGCAGGATCAGGCAGAA..................................2420.501010000
............................................................................................................TACAGAAGAAAGCATTACCAACCTTAGA............................................................................................................................2820.501010000
.........................................................................................................................................................................TATCATTTTTTTTTTATCCGTAAACG.................................................................2620.501010000
........AAATCGCAAATTCAAAAGCAAAGGT...................................................................................................................................................................................................................................2520.501010000
................................................................................................................GAAGAAAGCATTACCAACCTTAGATGA.........................................................................................................................2720.501010000
...........TCGCAAATTCAAAAGCAAAGGTTAATT..............................................................................................................................................................................................................................2720.501010000
......................................................................................................................................................................................................................................TAGTCACTTTTTTTGTACAGAAACTC....2620.501010000
...........TCGCAAATTCAAAAGCAAAGGTTAATTG.............................................................................................................................................................................................................................2820.501010000
.....................................................................................................TTCAACTTACAGAAGAAAGCATTAC......................................................................................................................................2520.501010000
..................TTCAAAAGCAAAGGTTAATTGGAATGTT......................................................................................................................................................................................................................2820.501010000
......................................................................................................................................................................................................ATAGTCACTCAGGCAGGATCA.........................................2120.501010000
..............................................................................................TCGTAGATTCAACTTACAGAAGAAAG............................................................................................................................................2620.501010000
...................................................................................................................GAAAGCATTACCAACCTTAGATGACAA......................................................................................................................2720.501010000
...........................................................................................................................................CAAGCATAGATTCGAAAGGAACGAG................................................................................................2520.501010000
...............AAATTCAAAAGCAAAGGTTAATTGGAA..........................................................................................................................................................................................................................2720.501010000
...................................................................................................................................................................................................................CAGGATCAGGCAGAAACTATAGTCACTT.....................2820.501010000
........................................................................................................................................................................................................................TCAGGCAGAAACTATAGTCAC.......................2120.501010000
dp5
AT------A-------GATTC-------------GAAAGGAACGAGTGAAATATT-ATATATTT--TTT-----------------------------------------------------------------------------------------------------------------CTACCCGTAAACGAAAA-AGTCACTCAGGCAGGATCAGGCAGAAACTATACTCAATTTTTTGGTAAAGAAACTCTAGCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.................................................................................................................................................................................................................................AACTATACTCAATTTTTTGGC..............2111.0010010000000
droVir3
CA-----ACAATCGCTGATGCAGAAACAAAGGCTTATGGGAAATTTCGATAAAACAGTAAGCTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..........ATCGCTGATGCAGAAACAAAGGCT..................................................................................................................................................................................................................................2411.001000000000000000100000000000000000000000000000000000000000000000
...................GCAGAAACAAAGGCTTATGGGAAAT........................................................................................................................................................................................................................2511.001000000000000000000000000000000010000000000000000000000000000000
.......................AAACAAAGGCTTATGGGA...........................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
.............................AGGCTTATGGGAAATTTCGAT..................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
................GATGCAGAAACAAAGGCTTATGGGAAA.........................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
..........................CAAAGGCTTATGGGAAATTTCG....................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
................GATGCAGAAACAAAGGCTTATGGGA...........................................................................................................................................................................................................................2511.001000000000001000000000000000000000000000000000000000000000000000
droMoj3
CC----AACAAGCGCAATTACAGAAACAGAGGTTCATGGCAAATTTTGAAAAAACAGTGAGTAC--TA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
......AACAAGCGCAATTACAGAAACAGAGGT...................................................................................................................................................................................................................................2711.001000001
......................................GCAAATTTTGAAAAAACA............................................................................................................................................................................................................1811.001000010
....................CAGAAACAGAGGTTCATGGCA...........................................................................................................................................................................................................................2111.001000001
.................TTACAGAAACAGAGGTTCATGGCAAATT.......................................................................................................................................................................................................................2811.001100000
droGri2
CA-----ACAGTCGCAATTGCAGAAACAGAGGTTAATGGGAGCCTTTGATAAAACAGTAAGTTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..............................GGTTAATGGGAGCCTTTGATAAAAC.............................................................................................................................................................................................................2511.00110
droAna3
CG------CAACAGCAGCCTCAGAAACAAAGGCTGATGGGAATGTTCGAAAATATGGTATGTTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
........................AACAAAGGCTGATGGGAAT.........................................................................................................................................................................................................................1911.001000010
...................TCAGAAACAAAGGCTGATGGGAATGTT......................................................................................................................................................................................................................2711.001100000
droBip1
CG------CAACAGCAGCCTCAAAAACAAAGGATGATGGGAATGTTTGAAAATATGGTTAGTTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
CA------CAACAGCAGCCTCAGAAGCAGAGGCTGATGGGAATGTTTGAAAATCTGGTGAGTTT--T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
CA------CAACAGCAAGCTCAAAAGCAGAGGATGATGGGAATGTTTGAAAATTTGGTGAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
CA------CAACAGCAACCTCAAAAGCAGAGGATGATGGGAATGTTTGAAAACTTGGTAAGTTT--TCTATTTTTTAAAG--------------------------------------------T---------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
CA------CAACAGCAACCTCAAAAGCAGAGGATGATGGGAATGTTTGAAAATTTGGTAAGTTA--TTTTCATAATATTT--------------------------------------------A---------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
CA------CAACAGCAGCCTCAGAAGCAGAGGATGATGGGAATGTTTGAAAATCTGGTAAGTTA--TTCCTTC---A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
CA------CAACAGCAGCCTCAAAA---GAGGATGATGGGAATGTTTGAAAATCTGGTAAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
CA------CAACAGCAGCCTCAAAAGCCGAGGATGATGGGAATGTTTGAAAATCTGGTATGTTA--TTGTTTC---A---------CTTTGGGGTAATGCCCATAACTTAGAAAAACAAACATTA---------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
AG------CAACAGCAA---CAAAAGCAGAGAATGATGGGAATGTATGAATTTATGGTAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................AAAAGCAGAGAATGATGGGAATGT.......................................................................................................................................................................................................................24110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000071200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................TGATGGGAATGTATGAATTTATGCC..........................................................................................................................................................................................................25110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000200000000000000010000000000000000000000000000000000000000000000000000000000000000000000001102000000200000000000000000000000000
..............................GAATGATGGGAATGTATGAAT.................................................................................................................................................................................................................2119.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000001010
.................................TGATGGGAATGTATGAAT.................................................................................................................................................................................................................1819.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000410400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................TGATGGGAATGTATGAATTTATGCCT.........................................................................................................................................................................................................2616.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000100000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................GATGGGAATGTATGAATTTATG............................................................................................................................................................................................................2215.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000
..............................GAATGATGGGAATGTATGAATT................................................................................................................................................................................................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
...........................AGAGAATGATGGGAATGTATGAATTT...............................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000301000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................AGCAGAGAATGATGGGAAT.........................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
...........................AGAGAATGATGGGAATGTATG....................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010
.............................AGAATGATGGGAATGTATGAA..................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000002000000000000000000000000000000000000
.............................AGAATGATGGGAATGTATG....................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.................................TGATGGGAATGTATGAATTTATGC...........................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
............................GAGAATGATGGGAATGTA......................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000
..............................GAATGATGGGAATGTATGA...................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000010
............................GAGAATGATGGGAATGTAT.....................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................AGAGAATGATGGGAATGTATGAATT................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000000000000
........................AGCAGAGAATGATGGGAATGTATG....................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000
....................................TGGGAATGTATGAATTTATG............................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
......................AAAGCAGAGAATGATGGGAATGTATGA...................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.................................TGATGGGAATGTATGAATTTA..............................................................................................................................................................................................................2111.0010000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................AGCAGAGAATGATGGGAATGTAT.....................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................AGCAGAGAATGATGGGAATG........................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.........................GCAGAGAATGATGGGAATGTATGAATT................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................AAAGCAGAGAATGATGGGAATGTATG....................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.............GCAA---CAAAAGCAGAGAATGATGGGAATG........................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................AATGATGGGAATGTATGAATTTATG............................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AG------CAACAGCAA---CAAAAGCAGAGAATG.................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............AA---CAAAAGCAGAGAATGATGGGAATGTA......................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..............................GAATGATGGGAATGTATGAATTT...............................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................TGATGGGAATGTATGAATTTAA.............................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
..............................GAATGATGGGAATGTATGAATTTC..............................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............AA---CAAAAGCAGAGAATGATGG.............................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
..............................GAATGATGGGAATGTATGAATTTATG............................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................ATGGGAATGTATGAATTTATG............................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.....................................GGGAATGTATGAATTTATGC...........................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................TGATGGGAATGTATGAATTT...............................................................................................................................................................................................................2011.0010000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................ATGATGGGAATGTATGAATTTATT............................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................AAGCAGAGAATGATGGGAATGTATGAATC................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................CAGAGAATGATGGGAATGTAAA....................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................AAGCAGAGAATGATGGGAATG........................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................ATGGGAATGTATGAATTTA..............................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........CAGCAA---CAAAAGCAGAGAATGATGG.............................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.......................AAGCAGAGAATGATGGGA...........................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..........................CAGAGAATGATGGGAATGTAT.....................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................GAGAATGATGGGAATGT.......................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................GAATGATGGGAATGTATG....................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000
..............................GAATGATGGGAATGTATGAATTTATGC...........................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.........AACAGCAA---CAAAAGCAGAGAATGA................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
....................................TGGGAATGTATGAATTTC..............................................................................................................................................................................................................1821.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............AA---CAAAAGCAGAGAATGATGGG............................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
............................GAGAATGATGGGAATGTATGAATTTATG............................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................AAAGCAGAGAATGATGGGAAT.........................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
............................GAGAATGATGGGAATGTATGA...................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.....................AAAAGCAGAGAATGATGGGAA..........................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..............................GAATGATGGGAATGTATGAATTTATGCC..........................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................GAGAATGATGGGAATGTATGAATTTA..............................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................GATGGGAATGTATGAATTTAT.............................................................................................................................................................................................................2111.0010000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................ATGATGGGAATGTATGAATTT...............................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................AGCAGAGAATGATGGGAA..........................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................AAGCAGAGAATGATGGGAA..........................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..............................GAATGATGGGAATGTATGAATTTATTCC..........................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
......................................GGAATGTATGAATTTATG............................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............AA---CAAAAGCAGAGAATGAT...............................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
...............................AATGATGGGAATGTATGAATTTATGCC..........................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................AGAATGATGGGAATGTATGA...................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................CAAAAGCAGAGAATGATGGGA...........................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
........CAACAGCAA---CAAAAGCAGAGAATGATGG.............................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................AGAGAATGATGGGAATGTATGA...................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................CAGAGAATGATGGGAATGT.......................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
............................GAGAATGATGGGAATGTATGAATT................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................ATGATGGGAATGTATGTC..................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
droSim2
CTC-GCAGCAGCAGCAACAACAAAAGCAGAGAATGATGGGAATGTATGAATTTATGGTAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................GAGAATGATGGGAATGTATGAATTTAT.............................................................................................................................................................................................................2711.00100000000001000000
.................................TGATGGGAATGTATGAATTTATGCC..........................................................................................................................................................................................................2511.00100000001000000000
.............................AGAATGATGGGAATGTATGAATTTA..............................................................................................................................................................................................................2511.00100000000000001000
.................................TGATGGGAATGTATGAATTTATG............................................................................................................................................................................................................2311.00100000000100000000
.....CAGCAGCAGCAACAACA..............................................................................................................................................................................................................................................17200.10200000000002000000
droSec2
CGCAGCAGCAGCAGCAGCAACAAAAGCAGAGAATGATGGGAATGTATGAATTTATGGTAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..................AACAAAAGCAGAGAATGATGGGAAT.........................................................................................................................................................................................................................2511.0010100
........................AGCAGAGAATGATGGGAATGTA......................................................................................................................................................................................................................2211.0010100
......................AAAGCAGAGAATGATGGGA...........................................................................................................................................................................................................................1911.0010100
droYak3
CG------CAGCAGCAGCAACATAAGCAGAGAATGATGGGAATGTATGAATTTATGGTAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...............AGCAACATAAGCAGAGAATGATGGGA...........................................................................................................................................................................................................................2611.00101000000000
............AGCAGCAACATAAGCAGAGAATGAT...............................................................................................................................................................................................................................2511.00100000010000
droEre2
CG------CAGCAGCAGCAACAAAAGCAGAGGATGATGGGAATGTATGAATTTATGGTAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................CAAAAGCAGAGGATGATGGG............................................................................................................................................................................................................................2011.0010000100
CG------CAGCAGCAGCAACAAAAGCAGAGGA...................................................................................................................................................................................................................................2711.0010000010
..................AACAAAAGCAGAGGATGATGG.............................................................................................................................................................................................................................2111.0010000100
..................................GATGGGAATGTATGAATTTAT.............................................................................................................................................................................................................2111.0010000010
........................AGCAGAGGATGATGGGAATGT.......................................................................................................................................................................................................................2111.0010000100
........CAGCAGCAGCAACAAAAGC.........................................................................................................................................................................................................................................1990.1110001000

Generated: 06/08/2015 at 02:51 PM