ID:

dpe_519

 Coordinate:

scaffold_1:1447821-1447921 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-5.3 -4.5 -4.5

Flybase annnotation

exon [dper_GLEANR_21319:8]; CDS [Dper\GL19177-cds]; exon [dper_GLEANR_21319:9]; CDS [Dper\GL19177-cds]; intron [Dper\GL19177-in]

No Repeatable elements found

mature
  1. scaffold_576:357-380 +
  2. dpe_519  scaffold_1:1447836-1447859 +
star
  1. scaffold_576:401-425 +
  2. dpe_519  scaffold_1:1447880-1447904 +

Sense Strand Reads

##################################################-----------------------------------------------------------------------------------------------------##################################################
ATTGCGCTGACGCAAGCAATACTCCTAATGCTGGTAAGTTCGAAAATCAAGTTTAAAGAATGTTTTGTTATATTCAACTTATATGATGTTTTTTGTTTGTTTTACATATCCTTAGTCATTTTCGTGGCAATAACTCAACTGATGCGAATAGAATTCAAGTCCTGCAGCATCAATTGCAACAGAATACCGGTGAAAATGGGC
*****************************************************************.(((((..(((......(((((......(((.......)))........))))).....)))..)))))******************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 M021
embryo
 V042
embryo
.................................................................TGTTATATTCAACTTATATGATGT................................................................................................................ 24 0 2 1.50 3 3 0 0
..................................................................................................................................................................................ACAGAATACCGGTGAAAATGGGC 23 0 2 1.50 3 0 3 0
....................................................................................................................................................TAGAATTCAAGTCCTGCAGCATCAAT........................... 26 0 2 1.00 2 2 0 0
.............................................................................................................CCTTAGTCATTTTCGTGGCAATAAC................................................................... 25 0 2 1.00 2 2 0 0
...........................................................................................................................................TGATGCGAATAGAATTCAAGTCCTGCA................................... 27 0 2 1.00 2 2 0 0
..........................................................................................................TATCCTTAGTCATTTTCGTGG.......................................................................... 21 0 2 1.00 2 2 0 0
..................................................................................................................................................................TGCAGCATCAATTGCAACAGAATACCGG........... 28 0 2 1.00 2 2 0 0
..............................................................................................................................................TGCGAATAGAATTCAAGTCCTGCAG.................................. 25 0 2 1.00 2 2 0 0
............................................................TGTTTTGTTATATTCAACTTATATGA................................................................................................................... 26 0 2 0.50 1 1 0 0
...............................TGGTAAGTTCGAAAATCAAGTTTAAA................................................................................................................................................ 26 0 2 0.50 1 1 0 0
..............................................................................................................................................................................TGCAACAGAATACCGGTGAAAATGGGC 27 0 2 0.50 1 1 0 0
....................................................TTAAAGAATGTTTTGTTATATTCAACTA......................................................................................................................... 28 1 2 0.50 1 1 0 0
............................................................................................................................................GATGCGAATAGAATTCAAGTCCTGCA................................... 26 0 2 0.50 1 1 0 0
..............................................................................................................................................TGCGAATAGAATTCAAGTCCTGCAGCA................................ 27 0 2 0.50 1 1 0 0
..............................................................................................................................................................................TGCAACAGAATACCGGTGAAAATGGG. 26 0 2 0.50 1 1 0 0
..............................................TCAAGTTTAAAGAATGTTTTGTTATAT................................................................................................................................ 27 0 2 0.50 1 1 0 0
.......................................................................................................................................................................CATCAATTGCAACAGAATACCGGTGAA....... 27 0 2 0.50 1 1 0 0
.............................................................................................................................................ATGCGAATAGAATTCAAGTCCTGCAGC................................. 27 0 2 0.50 1 1 0 0
............................................................................................................................................GATGCGAATAGAATTCAAGTCCT...................................... 23 0 2 0.50 1 1 0 0
....................................................................TATATTCAACTTATATGATGTTTTTTG.......................................................................................................... 27 0 2 0.50 1 1 0 0
..............................................................................................................................................TGCGAATACAATTCAAGTCCTGCAGC................................. 26 1 2 0.50 1 1 0 0
............................................................................................................TCCTTAGTAATTTTCGTGGCAATAACTC................................................................. 28 1 2 0.50 1 1 0 0
..........................................................................................................................................................TCAAGTCCTGCAGCATCAATTG......................... 22 0 2 0.50 1 0 1 0
............................................................................................................................................GATGCGAATAGAATTCAAGTCCTGC.................................... 25 0 2 0.50 1 1 0 0
..........................................................................................................................................................................CAATTGCAACAGAATACCGG........... 20 0 2 0.50 1 1 0 0
....................................................................................................................................................TAGAATTCAAGTCCTGCAGCATCAA............................ 25 0 2 0.50 1 1 0 0
................................................................TTGTTATAATCAACTTATATGATGTT............................................................................................................... 26 1 2 0.50 1 1 0 0
...............................TGGTAAGTTCGAAAATCAAGTT.................................................................................................................................................... 22 0 2 0.50 1 1 0 0
..........................................................................................................................................................................CAATTGCAACAGAATACCGGTGAAAA..... 26 0 2 0.50 1 1 0 0
...................................................................................TGATGTTTTTTGTTTGTTT................................................................................................... 19 0 2 0.50 1 1 0 0
.......................................................................................................................................................................CATCAATTGCAACAGAATACC............. 21 0 2 0.50 1 1 0 0
..........................................................................................................TATCCTTAGTCATTTTCGTGGCAA....................................................................... 24 0 2 0.50 1 1 0 0
..............................................................................................................................................TGCGAATAGAATTCAAGTCCTGCAGCAT............................... 28 0 2 0.50 1 1 0 0
................................GGTAAGTTCGAAAATCAAGTT.................................................................................................................................................... 21 0 2 0.50 1 1 0 0
.......................................TCGAAAATCAAGTTTAAAGA.............................................................................................................................................. 20 0 2 0.50 1 1 0 0
..................................................GTTTAAAGAATGTTTTGTTATATTCAACT.......................................................................................................................... 29 0 2 0.50 1 1 0 0
......................................................................TATTCAACTTATATGATGTTTTTTGTT........................................................................................................ 27 0 2 0.50 1 1 0 0
..................................TAAGTTCGAAAATCAAGTTTAAAGAAA............................................................................................................................................ 27 1 2 0.50 1 1 0 0
...........................................................................................................................................TGATGCGAATAGAATTCAAGTCCTGCAG.................................. 28 0 2 0.50 1 1 0 0
.........................................................................................................................................................................TCAATTGCAACAGAATACCGGTGAAAA..... 27 0 2 0.50 1 1 0 0
..................................TAAGTTCGAAAATCAAGTTTAAAAA.............................................................................................................................................. 25 1 2 0.50 1 1 0 0
...........................................................................................................................................TGATGCGAATAGAATTCAAGTCCTG..................................... 25 0 2 0.50 1 1 0 0
.............................................................................................................................................................................TTGCAACAGAATACCGGTGAAAATGG.. 26 0 2 0.50 1 1 0 0
............................................................TGTTTTGTTATATTCAACTTATATGAAAA................................................................................................................ 29 3 2 0.50 1 1 0 0
...........................................................................................................................................TGATGCGAATAGAATTCAAGTCCT...................................... 24 0 2 0.50 1 1 0 0
...........................................................................................................................................TGATGCGAATAGAATTCAAGTCCTGCAA.................................. 28 1 2 0.50 1 1 0 0
..............................................TCAAGTTTAAAGAATGTTTTGTTA................................................................................................................................... 24 0 2 0.50 1 1 0 0
...........................................................................................................................................TGATGCGAATAGAATTCAAGTCCTGC.................................... 26 0 2 0.50 1 1 0 0
...............................TGGTAAGTTCGAAAATCAAGTTTAAAGA.............................................................................................................................................. 28 0 2 0.50 1 1 0 0
..............................................................................TCATATGATGTTTTTTGT......................................................................................................... 18 1 5 0.20 1 0 0 1

Anti-sense strand reads

TAACGCGACTGCGTTCGTTATGAGGATTACGACCATTCAAGCTTTTAGTTCAAATTTCTTACAAAACAATATAAGTTGAATATACTACAAAAAACAAACAAAATGTATAGGAATCAGTAAAAGCACCGTTATTGAGTTGACTACGCTTATCTTAAGTTCAGGACGTCGTAGTTAACGTTGTCTTATGGCCACTTTTACCCG
*******************************************************************.(((((..(((......(((((......(((.......)))........))))).....)))..)))))***************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 M021
embryo
 V042
embryo
.............................................................................................................................................AACGCTTATCTTAAGTTCAGGA...................................... 22 1 2 1.00 2 0 2 0
.....................................................................................................................................................................TCGTAGTTAACGTTGTCTTAT............... 21 0 2 1.00 2 2 0 0
....................................TCAAGCTTTTAGTTCAAATTTCTTA............................................................................................................................................ 25 0 2 1.00 2 0 2 0
....................................TCAAGCTTTTAGCTCAAATTT................................................................................................................................................ 21 1 2 0.50 1 1 0 0
.................................CATTCAAGCTTTGAGTTCAAA................................................................................................................................................... 21 1 2 0.50 1 1 0 0
......................................AAGCTTTTAGTTCGAATTTCTT............................................................................................................................................. 22 1 2 0.50 1 1 0 0
..............................................................................................................................................ACGCTTATCTTAAGTTCAGG....................................... 20 0 2 0.50 1 1 0 0
...................................................................................................................................................................CGTCGTAGTTAACGTTGTC................... 19 0 2 0.50 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_1:1447771-1447971 + dpe_519 ATTGCGCTGACGCA-AGCAATACTCCTAATGCTGGTAAGTTC-GA----------AAATCA------AGTTTAAAGAATGTT--TTGTTATAT-TCAACTT----------ATATGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTTT-----------TTGTTTGTTTTACATATCCTTAGTCATTTTCGTGGCAATAACTCAACTGATGCGAATAGAATTCAAGT---------C---CTGCAGCATCAAT---TGCAACAGAAT---------------------------ACCGGTGAAAATGGGC
dp5 Unknown_group_3:143038-143239 + ATTGCGCTGACGCAAGCAAATACTCCTAATGCTGGTAAGTTC-GA----------AAATCA------AGTTTAAAGAATGTT--TTGTTATAA-TCAACTT----------ATATGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTTT-----------TTGTTTGTTTTAGATATTCTTAGTCATTTTCGTGGCAATAACTCAATTGATGCGAATAGAATTCAAGT---------C---CTGCAGCATCAAT---TGCAACAGAAT---------------------------ACCGGTGAAAATGGGC
droWil2 scf2_1100000004967:2588684-2588856 - ACTT------A---------------------------------CTTAATT----------------------------------------------TCT--T--------------------------------------------------------------------------------------------------------------------------TTACT--------------------------------------T----------------------------------ATGTTTA----TA------------TACAT------------GCTATTTTTTCAGATATGGGCGATAACTTTAATGAAAA---------TAATGTCGGTAGAGCCCATACTCATGCACTA---TTGCAGCAGCAGCAGCAGCAGCAGCAGCAACAAATATTAAATCAACATTTGCAGGCCGGTGAAACTGG--
droVir3 scaffold_12963:14380245-14380387 - TATA------T-----------------------------------------------------------------------------------TTAATTT----------ATATAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------------AACCTT-----------TTTTGTTTTACAGATTTTCCAAGTCATTTTTATAGTGC---TGATAATGAAGCGAATAGAACCCAAATTCATGCAGCA---GTACATCCACAGCACATCGTACAGCAA---------------------------CCCGATGAAAATCCTA
droMoj3 scaffold_6500:31590514-31590635 + TTTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTTTTCTAAGATTTCCCAAGACAATACTATGCTAA---TGATGTTGAAGCAAATAGAACGCAAACACTTGTACCC---ATACATCCACAGCATATCACACAGCAG---------------------------CCCGATGAAAATTCCT
droGri2 scaffold_15126:1631956-1632169 - ATTGGAATCCCTCAAAACACACACC------CTGGTAAGTTT-TTA----------ATTGATTC----------------------GTTAATA--------------------------------------------------TGGAATTGGCACTCACTTGT----------------------------------------------------------------ATA--------------------------------------T----------------------------------A----TATATATA------------TATATT-----------TTTTTTTTTTAAGAATTTCCTAACCATTATCATGGCAA---TGCAGTTGACGCGAATAGGAGTCAACCACATCCACCAGCAGTGCATCCACCGCATCTCGCACCGCAA---------------------------CCTGATGAAAACCCAC
droAna3 scaffold_12916:14246076-14246274 + ATTT------CACAAATGAATGGTCCTACAAATGGTATGTGC-TTGCAAGT--GAAAAT------ATTTCTCAAAAA--------------------------ACC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTAACAAATTTAGTTGTTCATTTTGCAGATTTCCTTAGCCACTTTCAAGCAAA---TCCCCTTGAACTAAATAGAGTGCAAGCACATGCTCTT---CTGCAGCAGCAACTTCTACAACAGCAG---------------------------CCTGGCGAAAATGTG-
droBip1 scf7180000396572:2726588-2726791 - ATTT------CACAAATGAATGGTCCTACAAATGGTAAGAAC-TTTTAAGT--AAAA-----------------CTATTGCTATTGATTCTAT-TGAATTG----------ACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C------------TACCTA-----------TTTTTTTTTGCAGATTTTCTTAGCCATTTTCAAGCTAA---TCCCGTTGATTTAAACAGAGTACAAGCACATGCTCTT---CTGCAGCAACAGCTTCTACAACAGCAG---------------------------CCTGGCGAAAATGTG-
droKik1 scf7180000302472:2928916-2929110 - ATAT------CGCAGATCAATGGACCTGCAAATGGTGAGTTT-TTA----------ACTGGAAAAA-A-------G------------TAT---ACAACTTATATTTATGTATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA------------TATATA--T--------TTTTTTTTTTCAGATTTTCTTAGCCATTTCCAGGGCAA---TTCTCTTGATTTAAATCGAGCTCAGGCCCATGCTCTC---TTACAGCAGCAACTGCTTCAGCAACAGCAG------------------------CAGCAGG---------
droFic1 scf7180000453838:648294-648501 + ATTT------CACAAATCAACGGTCCTGCAAATGGTATGCTA-GTT----------TCTGA------ATT-------------------------------------------------------------------------TGTATAACCTT-----------------------------------------------------------------------TTCAT--------------------------------------T----------------------------------TTGTTCT----TATAAAAAATATTATTTTAC-----------TGTGTTTTTGCAGATGTCCTAAGCCATTTCCAAGCTAA---CTCACTCGATTTAAACAGAGTTCAAGCCCATGCACTC---CTGCAGCAACAACTATTACAACAGCAA---------------------------ACAGGGGAAAATCTG-
droEle1 scf7180000491186:3512414-3512654 + ATTT------CACAAATAAACGGTCCTGCAAACGGTAAGATTTTCTTGATTTCATATAC---------TATGT---ACTTTG--CTGTTGTAG-ACCAC------------------------------------------------------------TTGTTGTTATTTTCACTGTTTTTGCTGTGCTTGTTATAT---------------------------------------------------------------------------------------------------------------------A----A-------AATCT------------TATATTTTTTCAGATTTCCTTAGCCATTTCCAGGCTAA---TTCACTCGATTTAAATAGAGTACAAGCACATGCACTT---CTGCAGCAACAACTATTACAACAGCAA---------------------------ACGGGGGAGAATCTG-
droRho1 scf7180000778296:20923-21249 - CTTT------CACAAATTAACGGTCCTGCAAATGGTAAGATTTATTTGATTTTGGATAC------GTTTATCG---AGCTTA--CTGTTAT--------------------------------------------------------------------------------TCATTGTATTTATTTTTGTTATTGTATTAAAACTGAAATATAAATTAACCAACATAAACATAATATTAATACCATAATTTTTTTGATATTTTTGAGACACCCAAAATCTTTAATATTTACACCAATTTACAT-------------------------TTTG-------------TATATTTTTTCAGATTTCCTTAGCCATTTCCAGGCTAA---TTCACTCGATTTAAATAGAGTACAAGCACATGCACTT---CTGCAACAACAACTATTACAACAACAG---------------------------ACAGGGGAAAATCTG-
droBia1 scf7180000302422:8321330-8321511 + GTTT------CACAAATCAATGGTCCTGCAAATGGTAAGTGT-ACA----------TTCACTA----------------------------------ACA-----------------------------------------------------------------------------------------------------------------------------TTAAC--------------------------------------CAAC-------------------------------C----ACTAAATA------------TGTGAA-----------CCTTTCTTTTCAGATTTCCTTAGCCATTTCCAGGCGAA---CTCAATCGACTTGAATAGAGTTCAAGCCCAAGCCCTT---CTGCATCAACAGCTATTACAACAGCAG---------------------------AGTGGGG---------
droTak1 scf7180000415438:627238-627413 + ATTT------CACAAATGAACGGTCCTGCAAATGGTGAGTTG-TAT----------TTTATTTAT-----------------------T----------------------------------------------------------------------------------------------------------------------------------------TTAAT--------------------------------------T----------------------------------AATTTAATAAATA------------TATAAT-----------CGATATTTTTCAGATATCCTTAGCCATTTCCAGGCTAA---CAATCTCGATTTTAATAGAGTTCAAGCCCATGCACTC---CTGCAGCAACAACTATTACAACACCAG-------------------------------------------
droEug1 scf7180000409554:4515059-4515273 - CTTT------CACAAATGATCGGTCCTGCAAATGGTGAGTTT-ATTTAATT--TTAA------------------------------TTATTT-TCAATCTA---------ATATAATATTTTTTTTGCTTGTCTCTTAAAAATGGA------------TTGA----------------------------------------------------------------AAA--------------------------------------C----------------------------------G----TATAAAAA------------TATTAA-----------CGATATTTTTCAGATTTTCTTAACCAATTCCAGCCCAA---TTCACTCGATATGAATAGAGCT------CATGCACTC---ATACAGCAACAACTACTACAGCAGC---------------------------------------------
dm3 chr2L:10401246-10401413 + GA--------CGCAAATCAACGGTCCTGCGAATGGTAGGTGA-ATT----------CCTACTGTG----------G------------TGTACTGCAACTTTAATAATTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTAAT-----------TAATTCCTTTTAGATTTCCTTAGAGCTTAT------------GAGC---------TCAGAGCTCAAGCCAATGCAATC---ATTCAGCAACAATTATTACAACAGCAC---------------------------GCAGGCGAA-------
droSim2 2l:10080261-10080450 + GA--------CGCAAATCAACGGTCCTGCGAATGGTAAGTAA-ATT----------CCTAGTGTGA-T-------G------------TGTACTGAAACTTTTATAATTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTTA-----------TTTCTTCTTTTAGATTTCCTTAGCCATTTCCAGGCGAA---CTCGCTCGATTTAAACAGAGCTCAAGCCCATGCAATC---CTTCAGCAACAAATCTTGCAACAGCAG---------------------------GCAGGCGAA-------
droSec2 scaffold_3:5829197-5829384 + GA--------CGCAAATCAACGGTCCTGCGAATGGTAAGTAA-ATT----------CCTACTGTGA-T-------G------------TGTACCGAAACTTTAATAACTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTGTA-----------TATTTCCTTTTAGATTTCCTTAGCCATTTCCAGGCGAA---CTCGCTCGATTTGAACAGAGCTCAGGCCCATGCAATG---CTTCAGCAACAAATTTTGCAACAGCAG---------------------------GCAGGCGAA-------
droYak3 2L:13082184-13082376 + GA--------CACAAATTAACGGTCCTGCGAATGGTAAATAG-ATT----------GTTCTTGAG----------G------------TGTACCACAACATAAACCAATACATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTAACAA--------TACTTACTTTTAGATTTCCTTAGCCATTTCCAGGCGAA---TTCGCTCGATTTGAATAGAGCTCAAGCCCATGCAATC---CTTCAGCAACAATTATTACAACAGCAA---------------------------GCAGGGGAA-------
droEre2 scaffold_4929:11010932-11011111 + GA--------CGCAAATCAACGGTCCTGCGAATGGTAAGTAA-TTT----------GTTCTTAAG----------G------------TGTAACACAACTTAAACT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACCAA-----------TAATTTCTTTTAGATTTCCTTAGCCATTTACAGGCGAA---CTCGCTCGATTTGAATAGAGCGCAAGCCCATGCAATC---CTTCAGCAACAATTATTACAGCAGCAA---------------------------GCAGGGG---------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
ATTGCGCTGACGCA-AGCAATACTCCTAATGCTGGTAAGTTC-GA----------AAATCA------AGTTTAAAGAATGTT--TTGTTATAT-TCAACTT----------ATATGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTTT-----------TTGTTTGTTTTACATATCCTTAGTCATTTTCGTGGCAATAACTCAACTGATGCGAATAGAATTCAAGT---------C---CTGCAGCATCAAT---TGCAACAGAAT---------------------------ACCGGTGAAAATGGGCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.....................................................................................TGTTATAT-TCAACTT----------ATATGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGT.....................................................................................................................................................................2421.503030000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGAAT---------------------------ACCGGTGAAAATGGGC2321.503300000
.................................................................................................................................................................................................................................................................................................................................................................................................................TAGAATTCAAGT---------C---CTGCAGCATCAAT---......................................................2621.002020000
..........................................................................................................................................................................................................................................................................................................................................................................CCTTAGTCATTTTCGTGGCAATAAC.............................................................................................................2521.002020000
........................................................................................................................................................................................................................................................................................................................................................................................................TGATGCGAATAGAATTCAAGT---------C---CTGCA.................................................................2721.002020000
.......................................................................................................................................................................................................................................................................................................................................................................TATCCTTAGTCATTTTCGTGG....................................................................................................................2121.002020000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGCATCAAT---TGCAACAGAAT---------------------------ACCGG...........2821.002020000
...........................................................................................................................................................................................................................................................................................................................................................................................................TGCGAATAGAATTCAAGT---------C---CTGCAG................................................................2521.002020000
..............................................................................TGTT--TTGTTATAT-TCAACTT----------ATATGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------........................................................................................................................................................................2620.501010000
................................TGGTAAGTTC-GA----------AAATCA------AGTTTAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................2620.501010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAACAGAAT---------------------------ACCGGTGAAAATGGGC2720.501010000
......................................................................TTAAAGAATGTT--TTGTTATAT-TCAACTA----------.................................................................................................................................................................................................................................................................................................................................................................................................2820.501010000
.........................................................................................................................................................................................................................................................................................................................................................................................................GATGCGAATAGAATTCAAGT---------C---CTGCA.................................................................2620.501010000
...........................................................................................................................................................................................................................................................................................................................................................................................................TGCGAATAGAATTCAAGT---------C---CTGCAGCA..............................................................2720.501010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAACAGAAT---------------------------ACCGGTGAAAATGGG.2620.501010000
..........................................................TCA------AGTTTAAAGAATGTT--TTGTTATAT-..................................................................................................................................................................................................................................................................................................................................................................................................................2720.501010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAAT---TGCAACAGAAT---------------------------ACCGGTGAA.......2720.501010000
..........................................................................................................................................................................................................................................................................................................................................................................................................ATGCGAATAGAATTCAAGT---------C---CTGCAGC...............................................................2720.501010000
.........................................................................................................................................................................................................................................................................................................................................................................................................GATGCGAATAGAATTCAAGT---------C---CT....................................................................2320.501010000
........................................................................................TATAT-TCAACTT----------ATATGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTTT-----------TTG....................................................................................................................................................2720.501010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TCAAGT---------C---CTGCAGCATCAAT---TG....................................................2220.501100000
.........................................................................................................................................................................................................................................................................................................................................................................................................GATGCGAATAGAATTCAAGT---------C---CTGC..................................................................2520.501010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAT---TGCAACAGAAT---------------------------ACCGG...........2020.501010000
.................................................................................................................................................................................................................................................................................................................................................................................................................TAGAATTCAAGT---------C---CTGCAGCATCAA..........................................................2520.501010000
................................TGGTAAGTTC-GA----------AAATCA------AGTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2220.501010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAT---TGCAACAGAAT---------------------------ACCGGTGAAAA.....2620.501010000
..................................................................................................................TGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTTT-----------TTGTTTGTTT.............................................................................................................................................1920.501010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAAT---TGCAACAGAAT---------------------------ACC.............2120.501010000
.......................................................................................................................................................................................................................................................................................................................................................................TATCCTTAGTCATTTTCGTGGCAA.................................................................................................................2420.501010000
...........................................................................................................................................................................................................................................................................................................................................................................................................TGCGAATAGAATTCAAGT---------C---CTGCAGCAT.............................................................2820.501010000
.................................GGTAAGTTC-GA----------AAATCA------AGTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2120.501010000
........................................TC-GA----------AAATCA------AGTTTAAAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................2020.501010000
....................................................................GTTTAAAGAATGTT--TTGTTATAT-TCAACT............................................................................................................................................................................................................................................................................................................................................................................................................2920.501010000
..........................................................................................TAT-TCAACTT----------ATATGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTTT-----------TTGTT..................................................................................................................................................2720.501010000
...................................TAAGTTC-GA----------AAATCA------AGTTTAAAGAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................2720.501010000
........................................................................................................................................................................................................................................................................................................................................................................................................TGATGCGAATAGAATTCAAGT---------C---CTGCAG................................................................2820.501010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAT---TGCAACAGAAT---------------------------ACCGGTGAAAA.....2720.501010000
........................................................................................................................................................................................................................................................................................................................................................................................................TGATGCGAATAGAATTCAAGT---------C---CTG...................................................................2520.501010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................T---TGCAACAGAAT---------------------------ACCGGTGAAAATGG..2620.501010000
..............................................................................TGTT--TTGTTATAT-TCAACTT----------ATATGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAA.....................................................................................................................................................................2920.501010000
........................................................................................................................................................................................................................................................................................................................................................................................................TGATGCGAATAGAATTCAAGT---------C---CT....................................................................2420.501010000
........................................................................................................................................................................................................................................................................................................................................................................................................TGATGCGAATAGAATTCAAGT---------C---CTGCAA................................................................2820.501010000
..........................................................TCA------AGTTTAAAGAATGTT--TTGTTA......................................................................................................................................................................................................................................................................................................................................................................................................................2420.501010000
........................................................................................................................................................................................................................................................................................................................................................................................................TGATGCGAATAGAATTCAAGT---------C---CTGC..................................................................2620.501010000
................................TGGTAAGTTC-GA----------AAATCA------AGTTTAAAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................2820.501010000
dp5
ATTGCGCTGACGCAAGCAAATACTCCTAATGCTGGTAAGTTC-GA----------AAATCA------AGTTTAAAGAATGTT--TTGTTATAA-TCAACTT----------ATATGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTTT-----------TTGTTTGTTTTAGATATTCTTAGTCATTTTCGTGGCAATAACTCAATTGATGCGAATAGAATTCAAGT---------C---CTGCAGCATCAAT---TGCAACAGAAT---------------------------ACCGGTGAAAATGGGCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...........................................................................................................................................................................................................................................................................................................................................................................................................TGCGAATAGAATTCAAGT---------C---CT....................................................................2111.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................ATAGAATTCAAGT---------C---CTGCAGC...............................................................2111.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGAAT---------------------------ACCGGTGAAAATGGGC2611.0010010000000
.....................................................................................................................................................................................................................................................................................................................................................................GATATTCTTAGTCATTTTCGTGGCA..................................................................................................................2511.0010010000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................AT---TGCAACAGAAT---------------------------ACCGGT..........1911.0010000100000
................................................................................................................................................................................................................................................................................................................................................................................................AACTCAATTGATGCGAATA.............................................................................................1911.0010000010000
..TGCGCTGACGCAAGCAAATACTCCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010000000
droWil2
ACTT------A---------------------------------CTTAATT----------------------------------------------TCT--T--------------------------------------------------------------------------------------------------------------------------TTACT--------------------------------------T----------------------------------ATGTTTA----TA------------TACAT------------GCTATTTTTTCAGATATGGGCGATAACTTTAATGAAAA---------TAATGTCGGTAGAGCCCATACTCATGCACTA---TTGCAGCAGCAGCAGCAGCAGCAGCAGCAACAAATATTAAATCAACATTTGCAGGCCGGTGAAACTGG--SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCAACATTTGCAGGCCGG...........2011.00100100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAAATCAACATTTGCAGGCC.............2211.00100010
............................................................................................................................................................................................................................................................................................................................................................................................AAA---------TAATGTCGGTAGAGC.........................................................................................1811.00101000
.....................................................................................................................................................................................................................................................................................................................................................................................TTAATGAAAA---------TAATGTCGG...............................................................................................1911.00101000
........................................................................................................................................................................................................................................................................................................................................................................................................TAATGTCGGTAGAGCCCATACT..................................................................................2211.00110000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTAAATCAACATTTGCAGGCCGGT..........2711.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATCAACATTTGCAGGCCGGT..........2211.00100010
........................................................................................................................................................................................................................................................................................................................................................................ATGGGCGATAACTTTAATGAAAA---------TAA.....................................................................................................2611.00100100
..............................................................................................................................................................................................................................................................................................................................................................................................A---------TAATGTCGGTAGAGCCCA......................................................................................1911.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................GTAGAGCCCATACTCATGCACTA---......................................................................2311.00100010
...........................................................................................................................................................................................................................................................................................................................................................................................AAAA---------TAATGTCGGTAGAGC.........................................................................................1911.00100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTAAATCAACATTTGCAGGCC.............2411.00100010
droVir3
TATA------T-----------------------------------------------------------------------------------TTAATTT----------ATATAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------------AACCTT-----------TTTTGTTTTACAGATTTTCCAAGTCATTTTTATAGTGC---TGATAATGAAGCGAATAGAACCCAAATTCATGCAGCA---GTACATCCACAGCACATCGTACAGCAA---------------------------CCCGATGAAAATCCTASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TACATCCACAGCACATCGTACAGC.............................................2411.001000000000000000000000000000001000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAA---------------------------CCCGATGAAAAT....1911.001000100000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................AGTGC---TGATAATGAAGCG.................................................................................................1811.001000000000000000000000000000000000001000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................CATCCACAGCACATCGTACAGC.............................................2211.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................AAGTCATTTTTATAGTGC---TG............................................................................................................2011.001000000000000000000000100000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................GAATAGAACCCAAATTCATGCAGCA---GT....................................................................2711.001000000000000000000000000000000000000000000000000000000000001000
...................................................................................................................................................................................................................................................................................................................................................................................TTTTTATAGTGC---TGATAATGAAGC..................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................AATGAAGCGAATAGAACCC.......................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................ATAGTGC---TGATAATGAAG...................................................................................................1811.001000000000000000000000000000000000000100000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................CCCAAATTCATGCAGCA---GTAC..................................................................2111.001100000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................GATAATGAAGCGAATAGAACCCAAATT..................................................................................2711.001000000000001000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................GTACATCCACAGCACATCGT..................................................2011.001000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................ATGCAGCA---GTACATCCACAGCAC.......................................................2311.001000000000000000000010000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................ACCCAAATTCATGCAGCA---GT....................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................ACATCCACAGCACATCGTACAGCAA---------------------------CCCG............2911.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................ACATCCACAGCACATCGTACAGC.............................................2311.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
TTTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTTTTTCTAAGATTTCCCAAGACAATACTATGCTAA---TGATGTTGAAGCAAATAGAACGCAAACACTTGTACCC---ATACATCCACAGCATATCACACAGCAG---------------------------CCCGATGAAAATTCCTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.......................................................................................................................................................................................................................................................................................................................................................................................................................GCAAACACTTGTACCC---ATACAT................................................................2211.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................AA---TGATGTTGAAGCAAATAGA...........................................................................................2111.001010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................ATACATCCACAGCATATCACACAGC.............................................2511.001100000
...................................................................................................................................................................................................................................................................................................................................................................................ATACTATGCTAA---TGATGTTGAAGCA.................................................................................................2511.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................TGATGTTGAAGCAAATAG............................................................................................1811.001001000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCATATCACACAGCAG---------------------------CCCGAT..........2511.001000010
........................................................................................................................................................................................................................................................................................................................................................................................................TGAAGCAAATAGAACGCAAACACTT...............................................................................2511.001100000
droGri2
ATTGGAATCCCTCAAAACACACACC------CTGGTAAGTTT-TTA----------ATTGATTC----------------------GTTAATA--------------------------------------------------TGGAATTGGCACTCACTTGT----------------------------------------------------------------ATA--------------------------------------T----------------------------------A----TATATATA------------TATATT-----------TTTTTTTTTTAAGAATTTCCTAACCATTATCATGGCAA---TGCAGTTGACGCGAATAGGAGTCAACCACATCCACCAGCAGTGCATCCACCGCATCTCGCACCGCAA---------------------------CCTGATGAAAACCCACSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCATCTCGCACCGCAA---------------------------CCTGATG.........2511.00110
droAna3
ATTT------CACAAATGAATGGTCCTACAAATGGTATGTGC-TTGCAAGT--GAAAAT------ATTTCTCAAAAA--------------------------ACC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTAACAAATTTAGTTGTTCATTTTGCAGATTTCCTTAGCCACTTTCAAGCAAA---TCCCCTTGAACTAAATAGAGTGCAAGCACATGCTCTT---CTGCAGCAGCAACTTCTACAACAGCAG---------------------------CCTGGCGAAAATGTG-SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTACAACAGCAG---------------------------CCTGGCGAAAATGT..2711.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................AA---TCCCCTTGAACTAAATAGAGT.........................................................................................2311.001000010
........................................................................................................................................................................................................................................................................................................................................................................................AAGCAAA---TCCCCTTGAACTAAATAGAGT.........................................................................................2811.001000010
droBip1
ATTT------CACAAATGAATGGTCCTACAAATGGTAAGAAC-TTTTAAGT--AAAA-----------------CTATTGCTATTGATTCTAT-TGAATTG----------ACAATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C------------TACCTA-----------TTTTTTTTTGCAGATTTTCTTAGCCATTTTCAAGCTAA---TCCCGTTGATTTAAACAGAGTACAAGCACATGCTCTT---CTGCAGCAACAGCTTCTACAACAGCAG---------------------------CCTGGCGAAAATGTG-SizeHit CountTotal NormTotal
No Reads
droKik1
ATAT------CGCAGATCAATGGACCTGCAAATGGTGAGTTT-TTA----------ACTGGAAAAA-A-------G------------TAT---ACAACTTATATTTATGTATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA------------TATATA--T--------TTTTTTTTTTCAGATTTTCTTAGCCATTTCCAGGGCAA---TTCTCTTGATTTAAATCGAGCTCAGGCCCATGCTCTC---TTACAGCAGCAACTGCTTCAGCAACAGCAG------------------------CAGCAGG---------SizeHit CountTotal NormTotal
No Reads
droFic1
ATTT------CACAAATCAACGGTCCTGCAAATGGTATGCTA-GTT----------TCTGA------ATT-------------------------------------------------------------------------TGTATAACCTT-----------------------------------------------------------------------TTCAT--------------------------------------T----------------------------------TTGTTCT----TATAAAAAATATTATTTTAC-----------TGTGTTTTTGCAGATGTCCTAAGCCATTTCCAAGCTAA---CTCACTCGATTTAAACAGAGTTCAAGCCCATGCACTC---CTGCAGCAACAACTATTACAACAGCAA---------------------------ACAGGGGAAAATCTG-SizeHit CountTotal NormTotal
No Reads
droEle1
ATTT------CACAAATAAACGGTCCTGCAAACGGTAAGATTTTCTTGATTTCATATAC---------TATGT---ACTTTG--CTGTTGTAG-ACCAC------------------------------------------------------------TTGTTGTTATTTTCACTGTTTTTGCTGTGCTTGTTATAT---------------------------------------------------------------------------------------------------------------------A----A-------AATCT------------TATATTTTTTCAGATTTCCTTAGCCATTTCCAGGCTAA---TTCACTCGATTTAAATAGAGTACAAGCACATGCACTT---CTGCAGCAACAACTATTACAACAGCAA---------------------------ACGGGGGAGAATCTG-SizeHit CountTotal NormTotal
No Reads
droRho1
CTTT------CACAAATTAACGGTCCTGCAAATGGTAAGATTTATTTGATTTTGGATAC------GTTTATCG---AGCTTA--CTGTTAT--------------------------------------------------------------------------------TCATTGTATTTATTTTTGTTATTGTATTAAAACTGAAATATAAATTAACCAACATAAACATAATATTAATACCATAATTTTTTTGATATTTTTGAGACACCCAAAATCTTTAATATTTACACCAATTTACAT-------------------------TTTG-------------TATATTTTTTCAGATTTCCTTAGCCATTTCCAGGCTAA---TTCACTCGATTTAAATAGAGTACAAGCACATGCACTT---CTGCAACAACAACTATTACAACAACAG---------------------------ACAGGGGAAAATCTG-SizeHit CountTotal NormTotal
No Reads
droBia1
GTTT------CACAAATCAATGGTCCTGCAAATGGTAAGTGT-ACA----------TTCACTA----------------------------------ACA-----------------------------------------------------------------------------------------------------------------------------TTAAC--------------------------------------CAAC-------------------------------C----ACTAAATA------------TGTGAA-----------CCTTTCTTTTCAGATTTCCTTAGCCATTTCCAGGCGAA---CTCAATCGACTTGAATAGAGTTCAAGCCCAAGCCCTT---CTGCATCAACAGCTATTACAACAGCAG---------------------------AGTGGGG---------SizeHit CountTotal NormTotal
No Reads
droTak1
ATTT------CACAAATGAACGGTCCTGCAAATGGTGAGTTG-TAT----------TTTATTTAT-----------------------T----------------------------------------------------------------------------------------------------------------------------------------TTAAT--------------------------------------T----------------------------------AATTTAATAAATA------------TATAAT-----------CGATATTTTTCAGATATCCTTAGCCATTTCCAGGCTAA---CAATCTCGATTTTAATAGAGTTCAAGCCCATGCACTC---CTGCAGCAACAACTATTACAACACCAG-------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
CTTT------CACAAATGATCGGTCCTGCAAATGGTGAGTTT-ATTTAATT--TTAA------------------------------TTATTT-TCAATCTA---------ATATAATATTTTTTTTGCTTGTCTCTTAAAAATGGA------------TTGA----------------------------------------------------------------AAA--------------------------------------C----------------------------------G----TATAAAAA------------TATTAA-----------CGATATTTTTCAGATTTTCTTAACCAATTCCAGCCCAA---TTCACTCGATATGAATAGAGCT------CATGCACTC---ATACAGCAACAACTACTACAGCAGC---------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
GA--------CGCAAATCAACGGTCCTGCGAATGGTAGGTGA-ATT----------CCTACTGTG----------G------------TGTACTGCAACTTTAATAATTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTAAT-----------TAATTCCTTTTAGATTTCCTTAGAGCTTAT------------GAGC---------TCAGAGCTCAAGCCAATGCAATC---ATTCAGCAACAATTATTACAACAGCAC---------------------------GCAGGCGAA-------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................TCAACGGTCCTGCGAATG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................18110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000061100000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000
..........CGCAAATCAACGGTCCTGCGAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2217.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................TAGAGCTTAT------------GAGC---------TCAGAGCTCAAGC...................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..............AATCAACGGTCCTGCGAATG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAATTATTACAACAGCAC---------------------------G...............2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................CTTTTAGATTTCCTTAGAGCT............................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................CAACGGTCCTGCGAATG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................AGAGCTCAAGCCAATGCAATC---ATTCAGC...............................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................GATTTCCTTAGAGCTTAT------------GAGC---------................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GCAAATCAACGGTCCTGCGAATGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................AGC---------TCAGAGCTCAAGCCAATGCAAT..........................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................TCAAGCCAATGCAATC---ATTCAGC...............................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................AGAGCTCAAGCCAATGCAATC---ATT...................................................................2411.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................GAGCTTAT------------GAGC---------TCAGAGCTCAAGCC..................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................ATTTCCTTAGAGCTTAT------------GAGC---------................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATTACAACAGCAC---------------------------GCAGG...........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................TTAGAGCTTAT------------GAGC---------TCAGAGC.........................................................................................2211.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................CAACGGTCCTGCGAATGGTAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAGCAACAATTATTACAAC................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................TGA-ATT----------CCTACTGTG----------G------------TGTA....................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...............ATCAACGGTCCTGCGAATG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
GA--------CGCAAATCAACGGTCCTGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................TAGAGCTTAT------------GAGC---------TCAGAGCTCAA.....................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................GCTTAT------------GAGC---------TCAGAGCT........................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................CAATC---ATTCAGCAACAATTATTACAAC................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................AGCCAATGCAATC---ATTCAGCAAC............................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................AAGCCAATGCAATC---ATTCAGCAACAATT........................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........CGCAAATCAACGGTCCTGCGAAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................AGAGCTCAAGCCAATGCAATC---......................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.............AAATCAACGGTCCTGCGAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TCAACGGTCCTGCGAATGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................AGCCAATGCAATC---ATTCAGCAACAA..........................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................CTCAAGCCAATGCAATC---ATTCAGCA..............................................................2511.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTACAACAGCAC---------------------------GCAGGCG.........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................C---------TCAGAGCTCAAGCCAATGCAAT..........................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................AGCTTAT------------GAGC---------TCAGAGCT........................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................GATTTCCTTAGAGCTTAT------------.............................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GCAAATCAACGGTCCTGCGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................GATTTCCTTAGAGCTTAT------------GAGC---------T...............................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACAACAGCAC---------------------------GCAGGCGAA-------2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.A--------CGCAAATCAACGGTCCTGCGAAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
GA--------CGCAAATCAACGGTCCTGCGAATGGTAAGTAA-ATT----------CCTAGTGTGA-T-------G------------TGTACTGAAACTTTTATAATTGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTTTA-----------TTTCTTCTTTTAGATTTCCTTAGCCATTTCCAGGCGAA---CTCGCTCGATTTAAACAGAGCTCAAGCCCATGCAATC---CTTCAGCAACAAATCTTGCAACAGCAG---------------------------GCAGGCGAA-------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................................................................................................................................................................................................................................................................................................................................................................................................TTAAACAGAGCTCAAGCC..................................................................................1811.00110000000000000000
......................................................................................................................................................................................................................................................................................................................................................................ATTTCCTTAGCCATTTCCAGGCGAA---CTC...........................................................................................................2811.00100010000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................TCCAGGCGAA---CTCGCTCGATTTAAAC..............................................................................................2611.00110000000000000000
............................................................................................................................................................................................................................................................................................................................................................................TTAGCCATTTCCAGGCGAA---CTCGCT........................................................................................................2511.00100010000000000000
.............................................................................................................................................................................................................................................................................................................................................................TTCTTTTAGATTTCCTTA.................................................................................................................................1811.00100001000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................TTAAACAGAGCTCAAGCCC.................................................................................1911.00100100000000000000
droSec2
GA--------CGCAAATCAACGGTCCTGCGAATGGTAAGTAA-ATT----------CCTACTGTGA-T-------G------------TGTACCGAAACTTTAATAACTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTGTA-----------TATTTCCTTTTAGATTTCCTTAGCCATTTCCAGGCGAA---CTCGCTCGATTTGAACAGAGCTCAGGCCCATGCAATG---CTTCAGCAACAAATTTTGCAACAGCAG---------------------------GCAGGCGAA-------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..............................................................................................................................................................................................................................................................................................................................................................................................................................CATGCAATG---CTTCAGCAAC............................................................1911.0011000
droYak3
GA--------CACAAATTAACGGTCCTGCGAATGGTAAATAG-ATT----------GTTCTTGAG----------G------------TGTACCACAACATAAACCAATACATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTAACAA--------TACTTACTTTTAGATTTCCTTAGCCATTTCCAGGCGAA---TTCGCTCGATTTGAATAGAGCTCAAGCCCATGCAATC---CTTCAGCAACAATTATTACAACAGCAA---------------------------GCAGGGGAA-------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................ATAGAGCTCAAGCCCATGCAATC---CTTCAG................................................................2911.00100000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................GAATAGAGCTCAAGCCCATGC.............................................................................2111.00100000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................ATTTGAATAGAGCTCAAGCC..................................................................................2011.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................GCCCATGCAATC---CTTCAGCA..............................................................2011.00101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................ATTTGAATAGAGCTCAAGCCCATGCA............................................................................2611.00100000010000
droEre2
GA--------CGCAAATCAACGGTCCTGCGAATGGTAAGTAA-TTT----------GTTCTTAAG----------G------------TGTAACACAACTTAAACT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACCAA-----------TAATTTCTTTTAGATTTCCTTAGCCATTTACAGGCGAA---CTCGCTCGATTTGAATAGAGCGCAAGCCCATGCAATC---CTTCAGCAACAATTATTACAGCAGCAA---------------------------GCAGGGG---------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................TTGAATAGAGCGCAAGCCCATGC.............................................................................2311.0010000010
.....................................................................................................................................................................................................................................................................................................................................................................................TACAGGCGAA---CTCGCTCGATTTGA................................................................................................2411.0011000000
GA--------CGCAAATCAACGGTCCTGCGAAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................C---CTTCAGCAACAATTATTACAGCAGCAA---------------------------................2811.0010001000

Generated: 06/08/2015 at 02:51 PM