ID:

dpe_495

 Coordinate:

scaffold_1:228557-228707 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-37.3 -37.2 -36.9

Flybase annnotation

CDS [Dper\GL19052-cds]; exon [dper_GLEANR_21195:1]; intron [Dper\GL19052-in]

No Repeatable elements found

mature
  1. dpe_495  scaffold_1:228565-228588 -
  2. scaffold_0:7445345-7445368 +
  3. scaffold_2:6906637-6906660 +
  4. scaffold_4:2058281-2058304 -
  5. scaffold_17:111123-111146 +
  6. scaffold_17:318491-318514 +
  7. scaffold_15:482827-482850 +
  8. scaffold_67:169764-169787 +
  9. scaffold_24:1532812-1532835 +
  10. scaffold_29:837862-837885 -
star

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TGCGATATGTTCTACTACGCCCATGGCAAGCGAATCAATGGAAAGAACAAGTAAGCAACCATATTGGACACCTCGGGACACGTGCTGTCTCCTGTTCCCTCTCTACAGAAAAACCCTTGCTTGCATGCATACCCCGCAGGTGAACAACCTTACCGCCTAGGGAGGATTTGTGTACTGGCTGGACGACAAGACCGGACTGGAGCGGATCACTGTCAACGGAGAGCGTCGTTCCGCGGAGCTGCACCGTGTGA
**************************************************(((((((((((...))).......((((((.....))))))((((.........))))........)))))))).((((((((((..(((((...........)))))..)).))...))))))((((((((.........)))).)))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 M021
embryo
 V042
embryo
 V057
head
 V111
male body
...............................................................................................................................................................................................CCGGACTGGAGCGGATCACTGTC..................................... 23 0 2 9.00 18 11 7 0 0 0
...............................................................................................................................................................................................CCGGACTGGAGCGGATCACTGTCA.................................... 24 0 2 7.50 15 15 0 0 0 0
.............................................................................................................................................................................................................................AGCGTCGTTCCGCGGAGCTGCAC....... 23 0 1 6.00 6 6 0 0 0 0
............................AGCGAATCAATGGAAAGAAC........................................................................................................................................................................................................... 20 0 1 3.00 3 0 3 0 0 0
...................................................................................................................................................................................TGGACGACAAGACCGGACTGGAGC................................................ 24 0 3 2.33 7 7 0 0 0 0
...............................................................................................................................................................................................CCGGACTGGAGCGGATCACTGTCAA................................... 25 0 2 2.00 4 4 0 0 0 0
........................................................................................................................................................................................GACAAGACCGGACTGGAGCGGATCACTGT...................................... 29 0 2 2.00 4 0 4 0 0 0
.................................................................................................................................................................................................................................TCGTTCCGCGGAGCTGCACC...... 20 0 1 2.00 2 2 0 0 0 0
.............................................................................................................................................................................................................................AGCGTCGTTCCGCGGAGCTGCACC...... 24 0 1 2.00 2 2 0 0 0 0
...............................................................................................................................................................................................CCGGACTGGAGCGGATCACTGT...................................... 22 0 2 1.50 3 3 0 0 0 0
...............................................................................................................................................................................................CCGGACTGGAGCGGATCACTGTCAAC.................................. 26 0 2 1.50 3 3 0 0 0 0
.....................CATGGCAAGCGAATCAATGGAAAGA............................................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................................................................AGCGTCGTCCCGCGGAGCTGCACC...... 24 1 1 1.00 1 1 0 0 0 0
..CGATATTTTCTCCTACGCCC..................................................................................................................................................................................................................................... 20 2 1 1.00 1 0 0 1 0 0
...............................................................................................................................................................................................................................CGTCGTTCCGCGGAGCTGCACCGT.... 24 0 1 1.00 1 1 0 0 0 0
................................................................................................................................................................................................CGGACTGGAGCGGATCACTGTCA.................................... 23 0 2 1.00 2 2 0 0 0 0
....................................................................................................................................................................................................CTGGAGCGGATCACTGTCAACGGA............................... 24 0 2 1.00 2 2 0 0 0 0
..................................................................................................................................................................................................................................CGTTCCGCGGAGCTGCACCGTGTG. 24 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................................................................AGCGTCGTTCCGCGGAGCTGCACCGT.... 26 0 1 1.00 1 1 0 0 0 0
................................................................................................................................................................................................................................GTCGTTCCGCGGAGCTGCACCG..... 22 0 1 1.00 1 1 0 0 0 0
..........TCTACTACGCCCATGGCAAGCGAATCAA..................................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0
..................GCCCATGGCAAGCGAATCAATGGAA................................................................................................................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0
........................................................................................................................................CAAGTGAACAACCTTACCGCCTAGGGA........................................................................................ 27 1 1 1.00 1 1 0 0 0 0
................................................................................................................................................................................................CGGACTGGAGCGGATCACTGTCAAC.................................. 25 0 2 1.00 2 2 0 0 0 0
......................................................................................................................................................TACCGCCTGGGGAGGATTTGT................................................................................ 21 1 1 1.00 1 1 0 0 0 0
TGCGATATGTTCTACTACGCCCATGG................................................................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0
..CGGTATGTTCTACTAGGACC..................................................................................................................................................................................................................................... 20 3 1 1.00 1 0 0 1 0 0
................................................................................................................................................................................................CGGACTGGAGCGGATCACTGTC..................................... 22 0 2 1.00 2 2 0 0 0 0
.......................TGGCAAGCGAATCAATGGAAAGAAC........................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
.....TATGTTCTACTACGCCCATGGCAAGC............................................................................................................................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................................................................AGCGTCGTTCCGCGGAGCTGCACCG..... 25 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................................................................AGCGTCGTTCCGCGGAGCTGC......... 21 0 10 0.90 9 9 0 0 0 0
..CGATATGTTCTAATAGGGCC..................................................................................................................................................................................................................................... 20 3 2 0.50 1 0 0 1 0 0
................................................................................................................................................................................................CGGACTGGAGCGGATCACTGTCACCG................................. 26 1 2 0.50 1 1 0 0 0 0
...................................................................................................................................................................................TGGACGACAAGACCGGACTGGAGCGGA............................................. 27 0 2 0.50 1 1 0 0 0 0
..CGATATTTTCTTCTACGCCC..................................................................................................................................................................................................................................... 20 2 2 0.50 1 0 0 1 0 0
...............................................................................................................................................................................................CCGGACTGGAGCGGATCACTG....................................... 21 0 2 0.50 1 1 0 0 0 0
...............................................................................................................................................................................................CCGGACTGGAGCGGATCA.......................................... 18 0 2 0.50 1 1 0 0 0 0
...............................................................................................................................................................................................CCGGACTGGAGCGGATCAC......................................... 19 0 2 0.50 1 1 0 0 0 0
..................................................................................................................................................................................................GACTGGAGCGGATCACTGT...................................... 19 0 2 0.50 1 1 0 0 0 0
...............................................................................................................................................................................................CCGGACTGGAGCGGATCACTGCC..................................... 23 1 2 0.50 1 1 0 0 0 0
.............................................................................................................................................................................................................................AGCGTCGTTCCGCGGAGCTGCACCGAA... 27 2 2 0.50 1 1 0 0 0 0
...............................................................................................................................................................................................CCGGACTGGAGCGGATCACT........................................ 20 0 2 0.50 1 1 0 0 0 0
....................................................................................................................................................................................................CTGGAGCGGATCACTGTCAACGGAG.............................. 25 0 2 0.50 1 1 0 0 0 0
.........................................................................................................................................................................GTGTACTGGCTGGACGACAAGACC.......................................................... 24 0 10 0.50 5 5 0 0 0 0
.............................................................................................................................................................................................................................AGCGTCGTTCCGCGGAGCTGCA........ 22 0 10 0.40 4 4 0 0 0 0
........................................................................................................................................................................TGTGTACTGGCTGGACGACAAGACC.......................................................... 25 0 10 0.40 4 3 0 0 0 1
.....................................................................................................................................................................................GACGACAAGACCGGACTGGAGC................................................ 22 0 3 0.33 1 1 0 0 0 0
...............................................................................................................................................................................................CCGGACTGCAGCGGATCACTGTCA.................................... 24 1 3 0.33 1 1 0 0 0 0
.............................................................................................................................................................................ACTGGCTGGACGACAAGA............................................................ 18 0 10 0.30 3 3 0 0 0 0
.........................................................................................................................................................................GTGTACTGGCTGGACGACAAGACCG......................................................... 25 0 10 0.30 3 3 0 0 0 0
..CGATAGGTTCTACTAGGACC..................................................................................................................................................................................................................................... 20 3 4 0.25 1 0 0 1 0 0
.....................................................................................................................................................................................................TGGAGCGGATCACTGTTAACGG................................ 22 1 4 0.25 1 1 0 0 0 0
...GATATTTTCTCCTACGCC...................................................................................................................................................................................................................................... 18 2 4 0.25 1 0 0 0 1 0
........................................................................................................................................................................................................AGCGGATCACTGTCAACGGAG.............................. 21 0 4 0.25 1 1 0 0 0 0
..CGATAGTTTCTACTACGACC..................................................................................................................................................................................................................................... 20 3 4 0.25 1 0 0 1 0 0
.....................................................................................................................................................................................................TGGAGCGGATCACTGTCAACGG................................ 22 0 4 0.25 1 1 0 0 0 0
..CGATAGGTTCTCCTACGACC..................................................................................................................................................................................................................................... 20 3 4 0.25 1 0 0 1 0 0
..........................................................................................................................................................................TGTACTGGCTGGACGACAAGACCG......................................................... 24 0 10 0.20 2 2 0 0 0 0
.........................................................................................................................................................................GTGTACTGGCTGGACGACAAGACCGG........................................................ 26 0 10 0.20 2 2 0 0 0 0
..CGATATTTTCTCCAACGCCC..................................................................................................................................................................................................................................... 20 3 5 0.20 1 0 0 0 1 0
...................................................................................................................................................................................TGGACGACAAGACCGGACTGGAG................................................. 23 0 6 0.17 1 1 0 0 0 0
...................................................................................................................................................................................TGGACGACAAGACCGGACTGGA.................................................. 22 0 6 0.17 1 1 0 0 0 0
....................................................................................................................................................................................................................TCAACGGAGAGCGTCGTTCCGCGGA.............. 25 0 8 0.13 1 1 0 0 0 0
....................................................................................................................................................................GATTTGTGTACTGGCTGGACGAC................................................................ 23 0 8 0.13 1 0 0 0 0 1
....................................................................................................................................................................................GGACGACAAGACCGGACT..................................................... 18 0 8 0.13 1 0 1 0 0 0
........................................................................................................................................................................................................................CGGAGAGCGTCGTTCCGCGGAG............. 22 0 8 0.13 1 1 0 0 0 0
....................................................................................................................................................................GATTTGTGTACTGGCTGGACGACAAG............................................................. 26 0 8 0.13 1 1 0 0 0 0
..................................................................................................................................................................................................................TGTCAACGGAGAGCGTCGTTCCGCGG............... 26 0 9 0.11 1 1 0 0 0 0
.........................................................................................................................................................................GTGTACTGGCTGGACGACAAGACCGGA....................................................... 27 0 9 0.11 1 1 0 0 0 0
...........................................................................................................................................................................................................................AGAGCGTCATTCCGCGGAGCTGC......... 23 1 9 0.11 1 1 0 0 0 0
..............................................................................................................................................................................CTGGCTGGACGACAAGACCGG........................................................ 21 0 10 0.10 1 1 0 0 0 0
..........................................................................................................................................................................TGTACTGGCTGGACGACAAGACC.......................................................... 23 0 10 0.10 1 1 0 0 0 0
.........................................................................................................................................................................GTGTACTGGCTGGACGGCAAGACC.......................................................... 24 1 10 0.10 1 1 0 0 0 0
.........................................................................................................................................................................GTGTACTGGCTGGACGACAAGA............................................................ 22 0 10 0.10 1 1 0 0 0 0
.........................................................................................................................................................................GTGTACTGGCTGGACGACAAGAC........................................................... 23 0 10 0.10 1 1 0 0 0 0
.............................................................................................................................................................................ACTGGCTGGACGACAAGACCGG........................................................ 22 0 10 0.10 1 1 0 0 0 0
.......................................................................................................................................................................TTGTGTACGGGCTGGACGACAAGACC.......................................................... 26 1 10 0.10 1 1 0 0 0 0
............................................................................................................................................................................................................................GAGCGTCGTTCCGCGGAGCT........... 20 0 11 0.09 1 1 0 0 0 0
..........................................................................................................................................................................TGTACTGGCTGGACGACAAG............................................................. 20 0 11 0.09 1 1 0 0 0 0
......................................................................................................................................................................TTTGTGTACTGGCTGGACGACAAGACAA......................................................... 28 2 11 0.09 1 1 0 0 0 0
.............................................................................................................................................................................................................................AGCGTCGTTCCGCGGAGC............ 18 0 12 0.08 1 1 0 0 0 0
.............................................................................................................................................................................................................................AGCGTCGTTCCGCGGAGCT........... 19 0 12 0.08 1 1 0 0 0 0
.............................................................................................................................................................................................................................AGCGTCGTTCCGCGGAGCTG.......... 20 0 12 0.08 1 1 0 0 0 0
..........................................................................................................................................................................................CAAGAGCGTACTTGAGCGG.............................................. 19 3 13 0.08 1 0 0 0 1 0
.............................................................................................................................................................................................................ATCACTGTCAACGGAGAGCGTCGTTCC................... 27 0 16 0.06 1 0 1 0 0 0
...........................................................................................................................................................................................................GGATCACTGTCAACGGAGAGCGTCG....................... 25 0 16 0.06 1 1 0 0 0 0
...............................................................................................................................................................................................................CACTGTCAACGGAGAGCGTCGT...................... 22 0 17 0.06 1 1 0 0 0 0
...........................................................................................................................................................................................................GGATCACTGTCAACGGAGAGCGT......................... 23 0 18 0.06 1 1 0 0 0 0
..CGATATGTTCTACTAGGAGC..................................................................................................................................................................................................................................... 20 3 20 0.05 1 0 0 1 0 0
...........................................................................................................................................................................................................GGATCACTGTCAACGGAG.............................. 18 0 20 0.05 1 1 0 0 0 0
.................................................................................................................................................AAGCATACCGCCTGGGGA........................................................................................ 18 3 20 0.05 1 1 0 0 0 0

Anti-sense strand reads

ACGCTATACAAGATGATGCGGGTACCGTTCGCTTAGTTACCTTTCTTGTTCATTCGTTGGTATAACCTGTGGAGCCCTGTGCACGACAGAGGACAAGGGAGAGATGTCTTTTTGGGAACGAACGTACGTATGGGGCGTCCACTTGTTGGAATGGCGGATCCCTCCTAAACACATGACCGACCTGCTGTTCTGGCCTGACCTCGCCTAGTGACAGTTGCCTCTCGCAGCAAGGCGCCTCGACGTGGCACACT
**************************************************(((((((((((...))).......((((((.....))))))((((.........))))........)))))))).((((((((((..(((((...........)))))..)).))...))))))((((((((.........)))).)))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 V050
head
..............................................................................................................................................................................................................AGTGACAGTTGCCTCTCGCAGCAAG.................... 25 0 16 1.19 19 19 0
................................................................................................................................................GTTGGACTGGGGCATCCCTCC...................................................................................... 21 3 1 1.00 1 0 1
.................................................................................................................................................................................CGACCTGCTGTTCTGGCCTGACCT.................................................. 24 0 4 0.75 3 3 0
...............................................................................................................................................................................................................GTGACAGTTGCCTCTCGCAGCAAG.................... 24 0 16 0.75 12 12 0
........................................CTTTCTTGTTCATTCGTTGGTA............................................................................................................................................................................................. 22 0 2 0.50 1 1 0
..................................................................................................................................................................................GACCTGCTGTTCTGGCCTGACCTC................................................. 24 0 6 0.33 2 2 0
........................................................................................GAGGACAAGGGAGAGATGTCTTT............................................................................................................................................ 23 0 4 0.25 1 1 0
..........................................TTCTTGTTCATTCGTTGGTATAACCT....................................................................................................................................................................................... 26 0 4 0.25 1 1 0
................................................................................................................................................................................................................TGACAGTTGCCTCTCGCAGCAAG.................... 23 0 16 0.25 4 4 0
.......................................................................................AGAGGACAAGGGAGAGATGTCTTTT........................................................................................................................................... 25 0 4 0.25 1 1 0
..........................................................................................GGACAAGGGAGAGATGTCTTTTTGG........................................................................................................................................ 25 0 4 0.25 1 1 0
...........................................TCTTGTTCATTCGTTGGTATAACC........................................................................................................................................................................................ 24 0 4 0.25 1 1 0
.............................................................................................CAAGGGAGAGATGTCTTTT........................................................................................................................................... 19 0 5 0.20 1 1 0
..................................................................................................................................................................................GACCTGCTGTTCTGGCCTGACCT.................................................. 23 0 6 0.17 1 1 0
.............................................................................................................................................................................................................TAGTGACAGTTGCCTCTCGCAGCAAG.................... 26 0 16 0.13 2 2 0
............................................................................................................................................................................................................CTAGTGACAGTTGCCTCTCGCAGCAAG.................... 27 0 16 0.13 2 2 0
.................................................................................................................................................................................................................GACAGTTGCCTCTCGCAGCAAG.................... 22 0 16 0.13 2 2 0
...............................................................................................................................................................................................................GTGACAGTTGCCTCTCGCAGCAA..................... 23 0 17 0.12 2 2 0
...........................................................................................................................................................................................................CCTAGTGACAGTTGCCTCTCGCAGCAAG.................... 28 0 15 0.07 1 1 0
...........................................................................................................................................................................................................CCTAGTGACAGTTGCCTCTCGCAGCAA..................... 27 0 16 0.06 1 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_1:228507-228757 - dpe_495 TGCGATATGTTCTACTACGCCCATGGCAAGCGAA---------------TCAATGGAAAGAACAAGTAAGCAA----CCATATTGGACA---------CCT----------------------------------------------------------------------------------CGGGAC----------ACGT--GC-------------------------------------------------------------------------TGT---CTCCTGTT-----CCCTC-TCTACAGAAAAACCCTTGCTTGCATGCATACCCCGCAGGTGAACAACCTTACCGCCTAGGGAGGATTTGTGTACTGGCTGGACGACAAGACCGGACTGGAGCGGATCACTGTCAACGGAGAGCGTCGTTCCGCGGAGCTGCACCGTGTGA-----------------------------------------------------
dp5 4_group1:232261-232503 - dps_1339 TGCGATATGTTCTACTACGCCCATGGCAAGCGAA---------------TCAATGGAAAGAACAAGTAAGCAA----CCATATTGGACA---------CCT----------------------------------------------------------------------------------CTGGAC----------ACGT--GC-------------------------------------------------------------------------TGT---CTCCTGTT-----CCCTC-TCTACAGAAAAACCCTTGCTTGCATGCATACCCCGCAGGTGAACAACCTTACCGCCTAGGTAAGATTTGGAGCTGGACTG--------GAGCGGACTGGAGCGGATCACTGTCAACGGAGAGCGTCGTTCCGCGGAGCTGCACCGTGTGA-----------------------------------------------------
droWil2 scf2_1100000004514:2830948-2831211 + TCGGATATGATTTACTATGCCCATGGCAAGAGAATCGATGCCATGGACATTAATGGCAAAAATAAGTGAGTGGGAAAAATCTTTCT----------------------------GGA-AAACATTTACTA---------------------AAGTTCTT-----GG---------------------------------------TT-------------------------------------------------------------------------TGT---------TT-----GTTTC-TTTGTAGGAAAACTCTTGTGTCCATGCACATATCCCAAGTGATTAATATAGCAGCTTTGGGCGGATTCGTCTATTGGTTGGATGACAAGACGGGAGTGGAACGCATCACGGTGACGGGTGAACGCCGTTCGGCGGAGTTAC--------------------------------------------------------------
droVir3 scaffold_13324:2556761-2556900 - ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAAAAACGCTGGTGTCGATGCACATCTCACAGGTTATCAATATTGCGGCGCTAGGTGGTTTTGTCTATTGGTTGGATGACAAGACTGGTGTAGAGCGCATCACAGTCACGGGGGAACGCCGGTCGGCGGAACTTCAACG----------------------------------------------------------
droMoj3 scaffold_6496:26314640-26315007 + TCCGATATGATTTATTATGCACATGGAAAGCGAATTGATGCGATGGATATCAATGGGAAGAACGTGTAAGTGAACAGC----TTT-------------------------------------------------------------------------------GATTTGACATTAA-AACTTATGTAC----------TTAT--GATGTAGACCCAAGACTGCAAAGCAAGACATTATAGATCATACTTAATTAGCCTTAGACTGATTTACCATTTTCTAAC---TTAT--TC-----TATTA-CTCCTAGAAAAACACTTGTGTCCATGCACATCTCACAGGTTATCAACATTGCGGCGTTAGGTGGATTTGTCTACTGGTTGGATGACAAAACTGGAGTGGAACGAATTACAGTGACGGGAGAACATCGCTCAGCAGAGCTTCAGCGACTACCACAAATTACGGATATCCGA---------------------------------
droGri2 scaffold_15112:4825566-4825885 + TCTGATATGATATACTATGCACACGGCAAGCGGATAGATGCAATGGACATTAATGGCAAAAACATGTAAGTAA--------ATCATT---------------GACAAA-----TATG-A----------------------------CCCG------TAGCATTGCTT----------TGCTTACA--ATTA----------A--TT-------------------------------------------------------------------------TCCAC----TTCTC-----ATTTG-CAATCAGAAAAACGCTGGTGTCCATGCATATTTCGCAGGTGATAAACATTGCGGCGTTGGGTGGTTTTGTCTACTGGCTGGATGACAAAACCGGAGTGGAACGCATCACGGTGACAGGAGAGCGTCGTTCGGCCGAGCTTCAGCGACTGCTGCAGATCACGGACATACGCGCTGTGTGGACACCG------------------
droAna3 scaffold_13266:16645947-16646210 - TCCGACATGATCTACTACGCCCACGGCAAGCGAATCGATGTGATCGATATTAACGGCAAAAATAAGTAGGTTCTTGGG---------------------------------------T---------TTTCTTTTGTGAAATAA-------ACTAACAT------------------T-------------------------------------------------------------------------------------------------------------TCATG-------TCCTT-TTTTCAGAAAAACCCTTGTGTCCATGCACATCTCCCAGGTGATCAACATTGCCGCCCTGGGTGGCTTCGTCTACTGGCTGGATGACAAAACTGGCGTGGAGCGGATCACCGTCAATGGCGGCAGTCGCTCTGCTGAGTTGCAACGCCTG------------------------------------------------------
droBip1 scf7180000396384:754438-754748 - TCCGACATGATCTACTATGCCCACGGCAAGAGGATCGATGTGATTGACATTAACGGCAAGAATAAGTAGGTTCTT--------------------------------------TGGGG---------TTTACTTTGTGAATTTGTCC----ACTAACAT------AT----------T-------------------------------------------------------------------------------------------------------------GGA----------TATC-CCTCTAGGAAAACCCTGGTCTCCATGCACATCTCCCAAGTCATCAACATCGCCGCTCTGGGTGGCTTCGTCTACTGGCTGGATGACAAAACGGGCGTGGAGCGCATCACAGTCAATGGCGGCAGTCGCTCTGCCGAGCTGCAACGCCTGCCACAGATCACCGACATCCGGGCCGTGTGGACACCAGATCCCAG----------
droKik1 scf7180000302277:492553-492824 + TCGGATATGATCTACTATGCGCATGGCAAGCGTATAGATGCCATCGATATCAATGGCAAAAACAAGTGAGTTTTGGATAAGATAATATTCCCTGGAAATATC-----------TTTA-A--------------------------------AATAATTA-------------------------------------------------------------------------------------------------------------------------------------TT-----GTTTT-CTCTTAGGAAAACCCTGGTTTCCATGCACATCTCCCAGGTGATCAACATAGCTGCCCTTGGGGGCTTTGTTTATTGGCTGGACGACAAGACCGGGGTTGAACGCATCACCGTTACCGGTGAACGTCGCTCCGCCGAACTGCAGCGTCTGC-----------------------------------------------------
droFic1 scf7180000454039:151400-151717 - TCCGATATGATTTACTATGCTCATGGCAAGCGGATCGATGCCATCGATATCAATGGCAAAAACAAGTGAGTATAGATTATAACTAGA---------------TATAATACATCTTAA-A---------------------------------------------------------------------C----------TTAC--GT-------------------------------------------------------------------------TGTAC-----CTTCC----TTTGT-TCCCCAGAAAAACCCTGGTTTCCATGCACATCTCTCAAGTAATCAACATCGCCGCTTTGGGTGGCTTTGTCTATTGGTTGGATGACAAAACCGGAGTGGAACGCATCACAGTCACCGGTGAACGTCGATCGGCTGAGTTGCAGCGCCTGCCGCAGATCACGGACATCCGTGCTGTGTGGACACCGGATGCGAA----------
droEle1 scf7180000491282:574319-574640 - TCTGATATGATTTACTATGCGCACGGAAAGCGCATCGATGCCATCGATATCAATGGCAAGAACAAGTGCGTTTTGAAGATTA------------------------------------A-----------------------------------------------------------AACTTCTT--ACTACTTTGACTTACTTCT-------------------------------------------------------------------------TGTCC-----GTTTCTTTGTTGTG-CTGTCAGAAAAACTCTGGTTTCCATGCACATCTCGCAGGTGATCAACATCGCTGCGCTGGGTGGTTTTGTCTACTGGCTGGATGACAAGACCGGTGTGGAACGCATCACAGTCACCGGCGAGAGGCGATCCGCTGAGCTGCAGCGGCTGCCGCAGATCACCGACATCCGGGCCGTGTGGACGCCCGATCCGAA----------
droRho1 scf7180000759836:21544-21865 + TCCGATATGATTTACTATGCACATGGCAAGCGGATTGATGCTATCGATATCAATGGAAAGAACAAGTGAGTTTAAAAGTTTATAGAGCC---------ATT------------CGGGG---------TTT------------------------------------------------AACTTATT--ATTA----------A--TT-------------------------------------------------------------------------TGT-----TTTATT-----TTTTG-CCTCCAGAAAAACTCTGGTTTCTATGCACATATCGCAGGTTATCAACATAGCCGCTTTGGGTGGATTTGTCTACTGGCTGGATGACAAAACCGGTGTGGAACGAATAACAGTTACTGGCGAAAGGCGATCCGCTGAGCTGCAGCGGCTGCCGCAAATCACCGACATTCGGGCCGTGTGGACGCCGGATGCGAA----------
droBia1 scf7180000302291:830136-830457 + TCCGATATGATTTACTATGCTCACGGCAAGCGGATTGATGCCATCGATATCAATGGAAAGAACAAGTGAGTTTGGAAGACTATTGTTCT---------TGTT-------CGTCTTAA-T---------------------------------------------------------------------C----------TTAT--AT----------------------------------------------------------CGTTTATCAATT---T-----------CT-----ATTTT-ATCGCAGAAAAACATTGGTTTCTATGCACATCTCGCAAGTGATTAATATTGCCGCCCTGGGCGGATTTGTCTACTGGTTGGATGACAAAACCGGTGTGGAACGCATAACTGTCACTGGCGAAAGGCGATCTGCTGAGCTGCAGCGCTTGCCGCAGATCACCGACATCCGTGCCGTGTGGACACCTGATCCAAA----------
droTak1 scf7180000415379:514968-515277 - TCCGATATGATTTACTATGCTCACGGCAAGCGGATTGATGCCATCGATATCAACGGAAAGAACAAGTGAGTTTAAAGTA----TT-------------------------------------------------------------------------------GATGTGT------------TTGGTT----------CTTT--CT-------------------------------------------------------------------------AAC---TTTTTGTC-----TATTTTCCACTAGAAAAACCCTGGTTTCAATGCACATCTCGCAAGTGATCAATATTGCCGCCCTGGGTGGTTTTGTCTACTGGCTGGATGACAAAACCGGTGTGGAACGCATCACTGTCACGGGCGAAAGGCGATCTGCTGAGCTACAGCGCCTGCCACAGATCACCGACATACGTGCCGTCTGGACACCCGATGCGAA----------
droEug1 scf7180000409758:384200-384465 + TCCGATATGATCTACTATGCCCATGGCAAAAGGATTGATGCCATTGATATCAATGGGAAGAACAAGTGAGTTTAAATAA---TTATA---------------GATAAA-----AAAG-C---------------------------------------------------------------------ATAA----------A--CT-------------------------------------------------------------------------TATACTTTCCTCTT-----CTTTG-CCCACAGAAAAACCCTAGTTTCCATGCATATATCGCAGGTGATCAATATCGCCGCACTGGGAGGATTTGTCTATTGGCTGGATGATAAAACGGGAGTTGAACGCATCACTGTTACTGGCGAAAGAAGATCAGCTGAGCTTCAGCG----------------------------------------------------------
dm3 chr2R:9343230-9343552 - TCCGATATGATTTACTATGCACATGGCAAGCGGATCGATGCCATTGACATCAACGGAAAAAACAAGTAAGTTTTAAGGAAAATTATACT---------TATT-----------TTGG-A--------------------------------TTTGAATA------------------T--------------------------------------------------------------------------------------------------------C---ATTGTGTT------TGCT-CCCCTAGAAAAACACTTGTTTCTATGCACATTTCGCAAGTGATCAACATCGCTGCCTTGGGTGGCTTTGTCTACTGGCTGGATGATAAAACCGGCGTGGAACGTATCACGGTGAATGGCGAAAGACGATCTGCTGAACTGCAGCGCCTACCTCAGATCACCGATATCCGGGCCGTTTGGACGCCAGATCCGAAAGTCCTGCGA
droSim2 2r:10006284-10006545 - TCCGATATGATTTACTATGCACATGGCAAGCGGATCGATGCCATTGATATCAACGGAAAAAACAAGTAAGTTCTAAAGAAAATTATACT---------TATT-----------TTTA-A--------------------------------ATTAACTA------------------T-------------------------------------------------------------------------------------------------------------CAATG-------TTTTT-CCCCTAGAAAAACACTTGTTTCTATGCACATTTCGCAAGTGATCAACATCGCTGCCTTGGGTGGATTTGTTTACTGGCTGGATGACAAAACCGGCGTGGAACGTATTACAGTGAATGGCGAAAGACGATCTGCTGAACTGCAGCG----------------------------------------------------------
droSec2 scaffold_1:6862336-6862647 - TCCGATATGATTTACTATGCACATGGCAAGCGGATCGATGCCATTGATATCAACGGAAAAAACAAGTAAGTTTGAAAGAAAATTATACT---------TATT-----------TTTA-A--------------------------------ATTAACTA------------------T-------------------------------------------------------------------------------------------------------------ACA---T-----TTTTT-CCCCCAGAAAAACACTTGTTTCTATGCACATTTCGCAAGTGATCAACATCGCTGCCTTGGGTGGCTTTGTCTACTGGCTGGATGATAAAACCGGCGTGGAACGTATTACAGTGAATGGCGAAAGACGATCTGCCGAACTGCAGCGACTACCTCAGATCACCGACATCCGGGCCGTTTGGACGCCGGATCCGAAAGT-------
droYak3 2R:7614151-7614416 + TCCGATATGATTTACTATGCACATGGCAAGCGAATAGATGCCATTGACATCAACGGGAAGAACAAGTAAGTTTGAAAGTAAATTGTACA---------CATT-----------TTGG-A---------------------------------------------------------------------A----------TTAT--CT-------------------------------------------------------------------------TATAT---GTTTTT-----TTTTT-TACCTAGAAAAACACTTGTTTCTATGCACATTTCGCAAGTGATCAACATCGCCGCCTTGGGTGGCTTTGTCTACTGGCTAGATGACAAAACCGGTGTAGAACGGATTACGGTCAATGGCGAAAGACGATCTGCTGAACTGCAGCG----------------------------------------------------------
droEre2 scaffold_4845:16473422-16473741 + TCCGATATGATTTACTATGCACATGGCAAGCGAATCGATGCCATTGACATCAACGGGAAGAACAAGTAAGTTTGAAAGCAAATTTTACA---------CATT-----------TTGA-A--------------------------------ATTAACTT------------------C-------------------------------------------------------------------------------------------------------------ACGTGTT-------CTC-TACCTAGAAAAACACTTGTTTCTATGCACATATCGCAAGTGATCAACATCGCTGCCTTGGGCGGCTTTGTCTACTGGCTGGATGACAAAACCGGTGTGGAACGAATCACAGTCAATGGCGAAAGACGATCTGCTGAACTGCAGCGGCTACCTCAGATCACCGACATACGGGCCGTTTGGACGCCGGATCCGAAAGTGCTGCGA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
TGCGATATGTTCTACTACGCCCATGGCAAGCGAA---------------TCAATGGAAAGAACAAGTAAGCAA----CCATATTGGACA---------CCT----------------------------------------------------------------------------------CGGGAC----------ACGT--GC-------------------------------------------------------------------------TGT---CTCCTGTT-----CCCTC-TCTACAGAAAAACCCTTGCTTGCATGCATACCCCGCAGGTGAACAACCTTACCGCCTAGGGAGGATTTGTGTACTGGCTGGACGACAAGACCGGACTGGAGCGGATCACTGTCAACGGAGAGCGTCGTTCCGCGGAGCTGCACCGTGTGA-----------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...........................................................................................................................................................................................................................................................................................................................................................................................................CCGGACTGGAGCGGATCACTGTC..........................................................................................2329.00187110000
...........................................................................................................................................................................................................................................................................................................................................................................................................CCGGACTGGAGCGGATCACTGTCA.........................................................................................2427.50150150000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGTCGTTCCGCGGAGCTGCAC............................................................2316.006060000
............................AGCGAA---------------TCAATGGAAAGAAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.003300000
...............................................................................................................................................................................................................................................................................................................................................................................................TGGACGACAAGACCGGACTGGAGC.....................................................................................................2432.337070000
...........................................................................................................................................................................................................................................................................................................................................................................................................CCGGACTGGAGCGGATCACTGTCAA........................................................................................2522.004040000
....................................................................................................................................................................................................................................................................................................................................................................................................GACAAGACCGGACTGGAGCGGATCACTGT...........................................................................................2922.004400000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTTCCGCGGAGCTGCACC...........................................................2012.002020000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGTCGTTCCGCGGAGCTGCACC...........................................................2412.002020000
...........................................................................................................................................................................................................................................................................................................................................................................................................CCGGACTGGAGCGGATCACTGT...........................................................................................2221.503030000
...........................................................................................................................................................................................................................................................................................................................................................................................................CCGGACTGGAGCGGATCACTGTCAAC.......................................................................................2621.503030000
.....................CATGGCAAGCGAA---------------TCAATGGAAAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCGTTCCGCGGAGCTGCACCGT.........................................................2411.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................CGGACTGGAGCGGATCACTGTCA.........................................................................................2321.002020000
................................................................................................................................................................................................................................................................................................................................................................................................................CTGGAGCGGATCACTGTCAACGGA....................................................................................2421.002020000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTCCGCGGAGCTGCACCGTGTG......................................................2411.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGTCGTTCCGCGGAGCTGCACCGT.........................................................2611.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGTTCCGCGGAGCTGCACCG..........................................................2211.001010000
..........TCTACTACGCCCATGGCAAGCGAA---------------TCAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001010000
..................GCCCATGGCAAGCGAA---------------TCAATGGAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................CGGACTGGAGCGGATCACTGTCAAC.......................................................................................2521.002020000
TGCGATATGTTCTACTACGCCCATGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................CGGACTGGAGCGGATCACTGTC..........................................................................................2221.002020000
.......................TGGCAAGCGAA---------------TCAATGGAAAGAAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
.....TATGTTCTACTACGCCCATGGCAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGTCGTTCCGCGGAGCTGCACCG..........................................................2511.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGTCGTTCCGCGGAGCTGC..............................................................21100.909090000
...............................................................................................................................................................................................................................................................................................................................................................................................TGGACGACAAGACCGGACTGGAGCGGA..................................................................................................2720.501010000
...........................................................................................................................................................................................................................................................................................................................................................................................................CCGGACTGGAGCGGATCACTG............................................................................................2120.501010000
...........................................................................................................................................................................................................................................................................................................................................................................................................CCGGACTGGAGCGGATCA...............................................................................................1820.501010000
...........................................................................................................................................................................................................................................................................................................................................................................................................CCGGACTGGAGCGGATCAC..............................................................................................1920.501010000
..............................................................................................................................................................................................................................................................................................................................................................................................................GACTGGAGCGGATCACTGT...........................................................................................1920.501010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGTCGTTCCGCGGAGCTGCACCGAA........................................................2720.501010000
...........................................................................................................................................................................................................................................................................................................................................................................................................CCGGACTGGAGCGGATCACT.............................................................................................2020.501010000
................................................................................................................................................................................................................................................................................................................................................................................................................CTGGAGCGGATCACTGTCAACGGAG...................................................................................2520.501010000
.....................................................................................................................................................................................................................................................................................................................................................................................GTGTACTGGCTGGACGACAAGACC...............................................................................................................24100.505050000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGTCGTTCCGCGGAGCTGCA.............................................................22100.404040000
....................................................................................................................................................................................................................................................................................................................................................................................TGTGTACTGGCTGGACGACAAGACC...............................................................................................................25100.404030001
.................................................................................................................................................................................................................................................................................................................................................................................................GACGACAAGACCGGACTGGAGC.....................................................................................................2230.331010000
.........................................................................................................................................................................................................................................................................................................................................................................................ACTGGCTGGACGACAAGA.................................................................................................................18100.303030000
.....................................................................................................................................................................................................................................................................................................................................................................................GTGTACTGGCTGGACGACAAGACCG..............................................................................................................25100.303030000
....................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGATCACTGTCAACGGAG...................................................................................2140.251010000
.................................................................................................................................................................................................................................................................................................................................................................................................................TGGAGCGGATCACTGTCAACGG.....................................................................................2240.251010000
......................................................................................................................................................................................................................................................................................................................................................................................TGTACTGGCTGGACGACAAGACCG..............................................................................................................24100.202020000
.....................................................................................................................................................................................................................................................................................................................................................................................GTGTACTGGCTGGACGACAAGACCGG.............................................................................................................26100.202020000
...............................................................................................................................................................................................................................................................................................................................................................................................TGGACGACAAGACCGGACTGGAG......................................................................................................2360.171010000
...............................................................................................................................................................................................................................................................................................................................................................................................TGGACGACAAGACCGGACTGGA.......................................................................................................2260.171010000
................................................................................................................................................................................................................................................................................................................................................................................................................................TCAACGGAGAGCGTCGTTCCGCGGA...................................................................2580.131010000
................................................................................................................................................................................................................................................................................................................................................................................GATTTGTGTACTGGCTGGACGAC.....................................................................................................................2380.131000001
................................................................................................................................................................................................................................................................................................................................................................................................GGACGACAAGACCGGACT..........................................................................................................1880.131100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAGAGCGTCGTTCCGCGGAG..................................................................2280.131010000
................................................................................................................................................................................................................................................................................................................................................................................GATTTGTGTACTGGCTGGACGACAAG..................................................................................................................2680.131010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................TGTCAACGGAGAGCGTCGTTCCGCGG....................................................................2690.111010000
.....................................................................................................................................................................................................................................................................................................................................................................................GTGTACTGGCTGGACGACAAGACCGGA............................................................................................................2790.111010000
..........................................................................................................................................................................................................................................................................................................................................................................................CTGGCTGGACGACAAGACCGG.............................................................................................................21100.101010000
......................................................................................................................................................................................................................................................................................................................................................................................TGTACTGGCTGGACGACAAGACC...............................................................................................................23100.101010000
.....................................................................................................................................................................................................................................................................................................................................................................................GTGTACTGGCTGGACGACAAGA.................................................................................................................22100.101010000
.....................................................................................................................................................................................................................................................................................................................................................................................GTGTACTGGCTGGACGACAAGAC................................................................................................................23100.101010000
.........................................................................................................................................................................................................................................................................................................................................................................................ACTGGCTGGACGACAAGACCGG.............................................................................................................22100.101010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCGTCGTTCCGCGGAGCT................................................................20110.091010000
......................................................................................................................................................................................................................................................................................................................................................................................TGTACTGGCTGGACGACAAG..................................................................................................................20110.091010000
..................................................................................................................................................................................................................................................................................................................................................................................TTTGTGTACTGGCTGGACGACAAGACAA..............................................................................................................28110.091010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGTCGTTCCGCGGAGC.................................................................18120.081010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGTCGTTCCGCGGAGCT................................................................19120.081010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGTCGTTCCGCGGAGCTG...............................................................20120.081010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................ATCACTGTCAACGGAGAGCGTCGTTCC........................................................................27160.061100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................GGATCACTGTCAACGGAGAGCGTCG............................................................................25160.061010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CACTGTCAACGGAGAGCGTCGT...........................................................................22170.061010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................GGATCACTGTCAACGGAGAGCGT..............................................................................23180.061010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................GGATCACTGTCAACGGAG...................................................................................18200.051010000
dp5
TGCGATATGTTCTACTACGCCCATGGCAAGCGAA---------------TCAATGGAAAGAACAAGTAAGCAA----CCATATTGGACA---------CCT----------------------------------------------------------------------------------CTGGAC----------ACGT--GC-------------------------------------------------------------------------TGT---CTCCTGTT-----CCCTC-TCTACAGAAAAACCCTTGCTTGCATGCATACCCCGCAGGTGAACAACCTTACCGCCTAGGTAAGATTTGGAGCTGGACTG--------GAGCGGACTGGAGCGGATCACTGTCAACGGAGAGCGTCGTTCCGCGGAGCTGCACCGTGTGA-----------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGATCACTGTCAACGGA....................................................................................2043.501400000000140
....................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGATCACTGTCAACGG.....................................................................................1952.401200000010110
......................................................................................................................................................................................................................................................................................................................................................................................................................CGGATCACTGTCAACGGAGA..................................................................................2042.0080000000080
.............................................................................................................................................................................................................................................................................................................................................................................TAAGATTTGGAGCTGGACTG--------GAG................................................................................................................2312.0020000000200
.............................................................................................................................................................................................................................................................................................................................................................................TAAGATTTGGAGCTGGACTG--------GAGCGG.............................................................................................................2612.0020000000110
.............................................................................................................................................................................................................................................................................................................................................................................TAAGATTTGGAGCTGGACTG--------GAGC...............................................................................................................2412.0020100000100
...........................................................................................................................................................................................................................................................................................................................................................................................................................CACTGTCAACGGAGAGCGTCGTTCCGC......................................................................2711.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................GCGGACTGGAGCGGATCACTGTC..........................................................................................2311.0010000000001
........GTTCTACTACGCCCATGGCAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000100
......ATGTTCTACTACGCCCATGGCAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
.....TATGTTCTACTACGCCCATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
........................................................................................................................................................................................................CGT--GC-------------------------------------------------------------------------TGT---CTCCTGTT-----CCC..............................................................................................................................................................................................................1911.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................G--------GAGCGGACTGGAGCGGATCA...............................................................................................2111.0010000000100
.........................................................................................................................................................................................................................................................................................................................................................................................................GAGCGGACTGGAGCGGAT.................................................................................................1811.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................GCGGATCACTGTCAACGGA....................................................................................1940.7530000001011
...........CTACTACGCCCATGGCAAGCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................TGGAGCGGATCACTGTCAACG......................................................................................2140.5020000000020
.....................................................................................................................................................................................................................................................................................................................................................................................................................GCGGATCACTGTCAACGGAGA..................................................................................2140.5020000000020
.............ACTACGCCCATGGCAAGCGAA---------------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................GAGCGGATCACTGTCAACGGA....................................................................................2140.5020000000020
...........CTACTACGCCCATGGCAAGCGAA---------------TC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.5010010000000
...............................................................................................................................................................................................................................................................................................................................................................................................TG--------GAGCGGACTGGAG......................................................................................................1520.5010000000010
...................................................................................................................................................................................................................................................................................................................................................................................................................GAGCGGATCACTGTCAACGG.....................................................................................2050.4020100001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGCGTCGTTCCGCGGAGCT................................................................2130.3310000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................AACGGAGAGCGTCGTTCCGCGG....................................................................2230.3310100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGAGCGTCGTTCCGCGGA...................................................................2030.3310000000010
....................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGATCACTGTCAACGGAG...................................................................................2140.2510000000010
..................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCGGATCACTGTCAACGG.....................................................................................2140.2510100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................TGGAGCGGATCACTGTCAAC.......................................................................................2040.2510000000010
....................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGATCACTGTCAACG......................................................................................1850.2010000000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................TCACTGTCAACGGAGAGCGTCGTTC.........................................................................2570.1410100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................GGATCACTGTCAACGGAGAGC................................................................................2170.1410010000000
................................................................................................................................................................................................................................................................................................................................................................................................................................TCAACGGAGAGCGTCGTTCCG.......................................................................2180.1310000000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................ATCACTGTCAACGGAGAGC................................................................................1980.1310100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................ATCACTGTCAACGGAGAGCGTC.............................................................................2280.1310100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................GGATCACTGTCAACGGAGA..................................................................................19100.1010000000010
droWil2
TCGGATATGATTTACTATGCCCATGGCAAGAGAATCGATGCCATGGACATTAATGGCAAAAATAAGTGAGTGGGAAAAATCTTTCT----------------------------GGA-AAACATTTACTA---------------------AAGTTCTT-----GG---------------------------------------TT-------------------------------------------------------------------------TGT---------TT-----GTTTC-TTTGTAGGAAAACTCTTGTGTCCATGCACATATCCCAAGTGATTAATATAGCAGCTTTGGGCGGATTCGTCTATTGGTTGGATGACAAGACGGGAGTGGAACGCATCACGGTGACGGGTGAACGCCGTTCGGCGGAGTTAC--------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.............................................................................................................................................................................................................................................................................................................................................................................................................................CGGTGACGGGTGAACGCCGT...........................................................................2011.00100010
.............................................................................................................................................................................................................................................................................................................................................................................................GTTGGATGACAAGACGGGAGTGGA.......................................................................................................2411.00100010
...............................................CATTAATGGCAAAAATAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100001
.........................................................................................................................................................................................................................................................................................................................................................................................................................ATCACGGTGACGGGTGAACGCC.............................................................................2211.00101000
...........................AAGAGAATCGATGCCATG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
..........................................................................................................................................................................................................................................................................................................................................................................................................................TCACGGTGACGGGTGAACGCCGTTCGGC......................................................................2811.00100100
..........................CAAGAGAATCGATGCCATG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
............................................................................................................................................................CTT-----GG---------------------------------------TT-------------------------------------------------------------------------TGT---------TT-----GTTTC-TTTG.......................................................................................................................................................................................................2111.00110000
..........................................................................................................................................................................................................................................................................................................................................................................TGGGCGGATTCGTCTATTGGTTG...........................................................................................................................2311.00100100
............................................................................................................................................................................................................................................................................................................................................................................................................GGGAGTGGAACGCATCACGGT...........................................................................................2111.00101000
.CGGATATGATTTACTATGCCCATGGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CACGGTGACGGGTGAACGC..............................................................................1911.00100010
......................................................................................................................................................................................................................................................................................................................................................................GCTTTGGGCGGATTCGTC....................................................................................................................................1811.00100010
................................................................................................................................................................................................................................................................................................................................................................................................GGATGACAAGACGGGAGTG.........................................................................................................1911.00100010
droVir3
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAAAAACGCTGGTGTCGATGCACATCTCACAGGTTATCAATATTGCGGCGCTAGGTGGTTTTGTCTATTGGTTGGATGACAAGACTGGTGTAGAGCGCATCACAGTCACGGGGGAACGCCGGTCGGCGGAACTTCAACG----------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................ACAAGACTGGTGTAGAGCGC...................................................................................................2013.003300000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................TGGTTTTGTCTATTGGTTGGA.........................................................................................................................2112.002000000000200000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................TATTGGTTGGATGACAAG..................................................................................................................1811.001000000000000000000000000000000000000100000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................GTAGAGCGCATCACAGTCACGGGGGAA.................................................................................2711.001000000000000000000000000000000000000000000000000000000000000010
............................................................................................................................................................................................................................................................................................................................................................CAATATTGCGGCGCTAGGTGGTTTTGT.....................................................................................................................................2711.001000000000001000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................CACAGGTTATCAATATTGCGG.....................................................................................................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................GACTGGTGTAGAGCGCATCACAGT...........................................................................................2411.001000000000001000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................ATTGCGGCGCTAGGTGGTT.........................................................................................................................................1911.001000000000000000100000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................AGTCACGGGGGAACGCCGGT..........................................................................2011.001000000000001000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................GTGGTTTTGTCTATTGGTTGGAT........................................................................................................................2311.001000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................TTTGTCTATTGGTTGGATGAC.....................................................................................................................2111.001000000010000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................GGCGCTAGGTGGTTTTGT.....................................................................................................................................1811.001000000000000010000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................ATCACAGTCACGGGGGAACGCCG............................................................................2311.001000000000000010000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................TGGATGACAAGACTGGTGTA.........................................................................................................2011.001000000000000000000000000000010000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................GTTATCAATATTGCGGCGCT.................................................................................................................................................2011.001000000000000000000000001000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................AACGCCGGTCGGCGGAACTTCAAC...........................................................2411.001000000000000000000000000000000000000100000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................GCATCACAGTCACGGGGGAACGC..............................................................................2311.001000000001000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................AGTCACGGGGGAACGCCGGTCGGCGGA...................................................................2711.001000000000000000000000010000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................CGGTCGGCGGAACTTCAAC...........................................................1911.001000000000000000000000100000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................TGGATGACAAGACTGGTGTAG........................................................................................................2111.001000000000000010000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................ATTGGTTGGATGACAAGACTG..............................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................CATCACAGTCACGGGGGAACGCCGGT..........................................................................2611.001000000000000000000000000000000000000000000000000000000000000010
.......................................................................................................................................................................................................................................................................................................................................................................................CTATTGGTTGGATGACAAGAC................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
.........................................................................................................................................................................................................................................................................................................................................................................CTAGGTGGTTTTGTCTATTGGTTGGAT........................................................................................................................2711.001000000000000000000000000000000000000100000000000000000000000000
droMoj3
TCCGATATGATTTATTATGCACATGGAAAGCGAATTGATGCGATGGATATCAATGGGAAGAACGTGTAAGTGAACAGC----TTT-------------------------------------------------------------------------------GATTTGACATTAA-AACTTATGTAC----------TTAT--GATGTAGACCCAAGACTGCAAAGCAAGACATTATAGATCATACTTAATTAGCCTTAGACTGATTTACCATTTTCTAAC---TTAT--TC-----TATTA-CTCCTAGAAAAACACTTGTGTCCATGCACATCTCACAGGTTATCAACATTGCGGCGTTAGGTGGATTTGTCTACTGGTTGGATGACAAAACTGGAGTGGAACGAATTACAGTGACGGGAGAACATCGCTCAGCAGAGCTTCAGCGACTACCACAAATTACGGATATCCGA---------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...................................TGATGCGATGGATATCAATGGGAAGAAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000001
............................................GGATATCAATGGGAAGAACG............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
..............................................ATATCAATGGGAAGAACGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000010
...................................................................................................................................................................................................................................................................................................................................................................................................................GAACGAATTACAGTGACGGGA....................................................................................2111.001000001
..............................................................................................................................................................................................................................................................................................................................................................................................................GAGTGGAACGAATTACAGTGACGGGA....................................................................................2611.001000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAGCAGAGCTTCAGCGACT.......................................................2111.001100000
droGri2
TCTGATATGATATACTATGCACACGGCAAGCGGATAGATGCAATGGACATTAATGGCAAAAACATGTAAGTAA--------ATCATT---------------GACAAA-----TATG-A----------------------------CCCG------TAGCATTGCTT----------TGCTTACA--ATTA----------A--TT-------------------------------------------------------------------------TCCAC----TTCTC-----ATTTG-CAATCAGAAAAACGCTGGTGTCCATGCATATTTCGCAGGTGATAAACATTGCGGCGTTGGGTGGTTTTGTCTACTGGCTGGATGACAAAACCGGAGTGGAACGCATCACGGTGACAGGAGAGCGTCGTTCGGCCGAGCTTCAGCGACTGCTGCAGATCACGGACATACGCGCTGTGTGGACACCG------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACGCGCTGTGTGGACACCG------------------2111.00101
..........................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTCGTTCGGCCGAGCTT...............................................................1911.00110
.........................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGTCGTTCGGCCGAGC.................................................................1811.00110
droAna3
TCCGACATGATCTACTACGCCCACGGCAAGCGAATCGATGTGATCGATATTAACGGCAAAAATAAGTAGGTTCTTGGG---------------------------------------T---------TTTCTTTTGTGAAATAA-------ACTAACAT------------------T-------------------------------------------------------------------------------------------------------------TCATG-------TCCTT-TTTTCAGAAAAACCCTTGTGTCCATGCACATCTCCCAGGTGATCAACATTGCCGCCCTGGGTGGCTTCGTCTACTGGCTGGATGACAAAACTGGCGTGGAGCGGATCACCGTCAATGGCGGCAGTCGCTCTGCTGAGTTGCAACGCCTG------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..............................................................................................................................................................................................................................................................................................................................................ATCTCCCAGGTGATCAACATTGCC......................................................................................................................................................2411.001010000
....................................................................................................................................................................................................................................................................................................................................................................................................GACAAAACTGGCGTGGAGC.....................................................................................................1911.001010000
...............................................................................................................................................................................................................................................................................................................................................................................................TGGATGACAAAACTGGCGTGG........................................................................................................2111.001100000
....................................GATGTGATCGATATTAACGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................TCACCGTCAATGGCGGCAGTC.............................................................................2111.001000010
......................................................................................................................................................................................................................................................................................................................................................................GCCCTGGGTGGCTTCGTCTACTGGCTG...........................................................................................................................2711.001100000
.................CGCCCACGGCAAGCGAATCGATA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
...........................................................................................................................................................................................................................................................................................................................................................................GGGTGGCTTCGTCTACTGGCTGG..........................................................................................................................2311.001010000
...............................................................................................................................................................................................................................................................................................................................................................................................................CGTGGAGCGGATCACCGTCAATGGC....................................................................................2511.001001000
.....................................................................................................................................................................................................................................................................................................................................................................................GTCTACTGGCTGGATGACAAAACTGGC............................................................................................................2711.001100000
...........CTACTACGCCCACGGCAAGCGAATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
droBip1
TCCGACATGATCTACTATGCCCACGGCAAGAGGATCGATGTGATTGACATTAACGGCAAGAATAAGTAGGTTCTT--------------------------------------TGGGG---------TTTACTTTGTGAATTTGTCC----ACTAACAT------AT----------T-------------------------------------------------------------------------------------------------------------GGA----------TATC-CCTCTAGGAAAACCCTGGTCTCCATGCACATCTCCCAAGTCATCAACATCGCCGCTCTGGGTGGCTTCGTCTACTGGCTGGATGACAAAACGGGCGTGGAGCGCATCACAGTCAATGGCGGCAGTCGCTCTGCCGAGCTGCAACGCCTGCCACAGATCACCGACATCCGGGCCGTGTGGACACCAGATCCCAG----------SizeHit CountTotal NormTotal
No Reads
droKik1
TCGGATATGATCTACTATGCGCATGGCAAGCGTATAGATGCCATCGATATCAATGGCAAAAACAAGTGAGTTTTGGATAAGATAATATTCCCTGGAAATATC-----------TTTA-A--------------------------------AATAATTA-------------------------------------------------------------------------------------------------------------------------------------TT-----GTTTT-CTCTTAGGAAAACCCTGGTTTCCATGCACATCTCCCAGGTGATCAACATAGCTGCCCTTGGGGGCTTTGTTTATTGGCTGGACGACAAGACCGGGGTTGAACGCATCACCGTTACCGGTGAACGTCGCTCCGCCGAACTGCAGCGTCTGC-----------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
TCCGATATGATTTACTATGCTCATGGCAAGCGGATCGATGCCATCGATATCAATGGCAAAAACAAGTGAGTATAGATTATAACTAGA---------------TATAATACATCTTAA-A---------------------------------------------------------------------C----------TTAC--GT-------------------------------------------------------------------------TGTAC-----CTTCC----TTTGT-TCCCCAGAAAAACCCTGGTTTCCATGCACATCTCTCAAGTAATCAACATCGCCGCTTTGGGTGGCTTTGTCTATTGGTTGGATGACAAAACCGGAGTGGAACGCATCACAGTCACCGGTGAACGTCGATCGGCTGAGTTGCAGCGCCTGCCGCAGATCACGGACATCCGTGCTGTGTGGACACCGGATGCGAA----------SizeHit CountTotal NormTotal
No Reads
droEle1
TCTGATATGATTTACTATGCGCACGGAAAGCGCATCGATGCCATCGATATCAATGGCAAGAACAAGTGCGTTTTGAAGATTA------------------------------------A-----------------------------------------------------------AACTTCTT--ACTACTTTGACTTACTTCT-------------------------------------------------------------------------TGTCC-----GTTTCTTTGTTGTG-CTGTCAGAAAAACTCTGGTTTCCATGCACATCTCGCAGGTGATCAACATCGCTGCGCTGGGTGGTTTTGTCTACTGGCTGGATGACAAGACCGGTGTGGAACGCATCACAGTCACCGGCGAGAGGCGATCCGCTGAGCTGCAGCGGCTGCCGCAGATCACCGACATCCGGGCCGTGTGGACGCCCGATCCGAA----------SizeHit CountTotal NormTotal
No Reads
droRho1
TCCGATATGATTTACTATGCACATGGCAAGCGGATTGATGCTATCGATATCAATGGAAAGAACAAGTGAGTTTAAAAGTTTATAGAGCC---------ATT------------CGGGG---------TTT------------------------------------------------AACTTATT--ATTA----------A--TT-------------------------------------------------------------------------TGT-----TTTATT-----TTTTG-CCTCCAGAAAAACTCTGGTTTCTATGCACATATCGCAGGTTATCAACATAGCCGCTTTGGGTGGATTTGTCTACTGGCTGGATGACAAAACCGGTGTGGAACGAATAACAGTTACTGGCGAAAGGCGATCCGCTGAGCTGCAGCGGCTGCCGCAAATCACCGACATTCGGGCCGTGTGGACGCCGGATGCGAA----------SizeHit CountTotal NormTotal
No Reads
droBia1
TCCGATATGATTTACTATGCTCACGGCAAGCGGATTGATGCCATCGATATCAATGGAAAGAACAAGTGAGTTTGGAAGACTATTGTTCT---------TGTT-------CGTCTTAA-T---------------------------------------------------------------------C----------TTAT--AT----------------------------------------------------------CGTTTATCAATT---T-----------CT-----ATTTT-ATCGCAGAAAAACATTGGTTTCTATGCACATCTCGCAAGTGATTAATATTGCCGCCCTGGGCGGATTTGTCTACTGGTTGGATGACAAAACCGGTGTGGAACGCATAACTGTCACTGGCGAAAGGCGATCTGCTGAGCTGCAGCGCTTGCCGCAGATCACCGACATCCGTGCCGTGTGGACACCTGATCCAAA----------SizeHit CountTotal NormTotal
No Reads
droTak1
TCCGATATGATTTACTATGCTCACGGCAAGCGGATTGATGCCATCGATATCAACGGAAAGAACAAGTGAGTTTAAAGTA----TT-------------------------------------------------------------------------------GATGTGT------------TTGGTT----------CTTT--CT-------------------------------------------------------------------------AAC---TTTTTGTC-----TATTTTCCACTAGAAAAACCCTGGTTTCAATGCACATCTCGCAAGTGATCAATATTGCCGCCCTGGGTGGTTTTGTCTACTGGCTGGATGACAAAACCGGTGTGGAACGCATCACTGTCACGGGCGAAAGGCGATCTGCTGAGCTACAGCGCCTGCCACAGATCACCGACATACGTGCCGTCTGGACACCCGATGCGAA----------SizeHit CountTotal NormTotal
No Reads
droEug1
TCCGATATGATCTACTATGCCCATGGCAAAAGGATTGATGCCATTGATATCAATGGGAAGAACAAGTGAGTTTAAATAA---TTATA---------------GATAAA-----AAAG-C---------------------------------------------------------------------ATAA----------A--CT-------------------------------------------------------------------------TATACTTTCCTCTT-----CTTTG-CCCACAGAAAAACCCTAGTTTCCATGCATATATCGCAGGTGATCAATATCGCCGCACTGGGAGGATTTGTCTATTGGCTGGATGATAAAACGGGAGTTGAACGCATCACTGTTACTGGCGAAAGAAGATCAGCTGAGCTTCAGCG----------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
TCCGATATGATTTACTATGCACATGGCAAGCGGATCGATGCCATTGACATCAACGGAAAAAACAAGTAAGTTTTAAGGAAAATTATACT---------TATT-----------TTGG-A--------------------------------TTTGAATA------------------T--------------------------------------------------------------------------------------------------------C---ATTGTGTT------TGCT-CCCCTAGAAAAACACTTGTTTCTATGCACATTTCGCAAGTGATCAACATCGCTGCCTTGGGTGGCTTTGTCTACTGGCTGGATGATAAAACCGGCGTGGAACGTATCACGGTGAATGGCGAAAGACGATCTGCTGAACTGCAGCGCCTACCTCAGATCACCGATATCCGGGCCGTTTGGACGCCAGATCCGAAAGTCCTGCGASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCTCAGATCACCGATATCC...................................2117.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGAACTGCAGCGCCTA......................................................1916.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................TTGAATA------------------T--------------------------------------------------------------------------------------------------------C---ATTGTGTT------TGCT-CCCCTAG....................................................................................................................................................................................................2814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000010000010000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAGATCACCGATATCCGGGCCGT............................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000001000000000000
..............................................................................................................................................................................................................................................................................................................................................................................TGGCTTTGTCTACTGGCTGGA.........................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................CGAAAGACGATCTGCTGAACTGC..............................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000100000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CACGGTGAATGGCGAAAGACGATCTG.......................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................TGAATGGCGAAAGACGATCTGCTGA...................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................GGATGATAAAACCGGCGTGGAACGTAT.................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................TCAACATCGCTGCCTTGGG..............................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................AAGACGATCTGCTGAACT................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................TGAATGGCGAAAGACGATCTGCT.....................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................GGCGTGGAACGTATCACGGT...........................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................TCGATGCCATTGACATCAACGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGCTGAACTGCAGCGCCTACCTCAGA...............................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACCGATATCCGGGCCGTTTGGACGC....................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................TAAAACCGGCGTGGAACGTATCACG.............................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGAAAGACGATCTGCTGAACTGC..............................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................CACATTTCGCAAGTGATCA..............................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGCGAAAGACGATCTGCTGAACTGC..............................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
...................................................................................................................................................................................................................................................................................................................................................................................................TGATAAAACCGGCGTGGAACGTATT................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................GGCTTTGTCTACTGGCTGGAT........................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................ATCACGGTGAATGGCGAAAGACG............................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................CGATCTGCTGAACTGCAGCGCCTAC.....................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAAAGACGATCTGCTGAACT................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................TGCCTTGGGTGGCTTTGTCTACTGGC.............................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................ATGCACATGGCAAGCGGATCGAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................GTCTACTGGCTGGATGATAA...................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................ACCGGCGTGGAACGTATCACG.............................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGACGCCAGATCCGAAAGTCCTGCGC2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGATCACCGATATCCGGGCC..............................2111.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCCGGGCCGTTTGGACGC....................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................TCACGGTGAATGGCGAAAGACGATCT........................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCGAAAGACGATCTGCTGAACTGC..............................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................CACATTTCGCAAGTGATCAACATCGCT......................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGAAAGACGATCTGCT.....................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCAGATCCGAAAGTCCTGCGA2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................GCACATGGCAAGCGGATCGAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCTCAGATCACCGATATCCGGGCCGT............................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TATGCACATGGCAAGCGGATCGATGCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
droSim2
TCCGATATGATTTACTATGCACATGGCAAGCGGATCGATGCCATTGATATCAACGGAAAAAACAAGTAAGTTCTAAAGAAAATTATACT---------TATT-----------TTTA-A--------------------------------ATTAACTA------------------T-------------------------------------------------------------------------------------------------------------CAATG-------TTTTT-CCCCTAGAAAAACACTTGTTTCTATGCACATTTCGCAAGTGATCAACATCGCTGCCTTGGGTGGATTTGTTTACTGGCTGGATGACAAAACCGGCGTGGAACGTATTACAGTGAATGGCGAAAGACGATCTGCTGAACTGCAGCG----------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......................................................................................................................................................................................................................................................................................................................................................................................................................CGTATTACAGTGAATGGCGAA.................................................................................2112.00200000020000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCGAAAGACGATCTGCTGAACTGC..............................................................2611.00100000000010000000
....................ACATGGCAAGCGGATCGATGCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCGAAAGACGATCTGCTGAACTGCAGC...........................................................2911.00100000001000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAAAGACGATCTGCTGAA..................................................................2011.00100000000000001000
.........................................................................................................................................................................................................................................................................................................................................................................................................................ATTACAGTGAATGGCGAAAGAC.............................................................................2211.00100100000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................TGGAACGTATTACAGTGAATGGCGAA.................................................................................2611.00100000010000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGGCGAAAGACGATCTGC......................................................................2111.00101000000000000000
droSec2
TCCGATATGATTTACTATGCACATGGCAAGCGGATCGATGCCATTGATATCAACGGAAAAAACAAGTAAGTTTGAAAGAAAATTATACT---------TATT-----------TTTA-A--------------------------------ATTAACTA------------------T-------------------------------------------------------------------------------------------------------------ACA---T-----TTTTT-CCCCCAGAAAAACACTTGTTTCTATGCACATTTCGCAAGTGATCAACATCGCTGCCTTGGGTGGCTTTGTCTACTGGCTGGATGATAAAACCGGCGTGGAACGTATTACAGTGAATGGCGAAAGACGATCTGCCGAACTGCAGCGACTACCTCAGATCACCGACATCCGGGCCGTTTGGACGCCGGATCCGAAAGT-------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
......................................................................................................................................................................................................................................................................................................................................................................................................................CGTATTACAGTGAATGGCGAAAGAC.............................................................................2511.0010100
droYak3
TCCGATATGATTTACTATGCACATGGCAAGCGAATAGATGCCATTGACATCAACGGGAAGAACAAGTAAGTTTGAAAGTAAATTGTACA---------CATT-----------TTGG-A---------------------------------------------------------------------A----------TTAT--CT-------------------------------------------------------------------------TATAT---GTTTTT-----TTTTT-TACCTAGAAAAACACTTGTTTCTATGCACATTTCGCAAGTGATCAACATCGCCGCCTTGGGTGGCTTTGTCTACTGGCTAGATGACAAAACCGGTGTAGAACGGATTACGGTCAATGGCGAAAGACGATCTGCTGAACTGCAGCG----------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................GTAGAACGGATTACGGTCAATGGC....................................................................................2412.00200000020000
.............................................................................................................................................................................................................................................................................................................................................................................................................GGTGTAGAACGGATTACGGTCAATGG.....................................................................................2611.00101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................TTACGGTCAATGGCGAAAGAC.............................................................................2111.00100000010000
..................................................................................................................................................................................................................................................................................................................................GTTTCTATGCACATTTCGCAAGT...................................................................................................................................................................2311.00101000000000
.........................................................................................................................................................................................................................................................................................................................................................GATCAACATCGCCGCCTTGGGTG............................................................................................................................................2311.00101000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................AGAACGGATTACGGTCAATGGCGAA.................................................................................2511.00100000010000
......ATGATTTACTATGCACATGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
droEre2
TCCGATATGATTTACTATGCACATGGCAAGCGAATCGATGCCATTGACATCAACGGGAAGAACAAGTAAGTTTGAAAGCAAATTTTACA---------CATT-----------TTGA-A--------------------------------ATTAACTT------------------C-------------------------------------------------------------------------------------------------------------ACGTGTT-------CTC-TACCTAGAAAAACACTTGTTTCTATGCACATATCGCAAGTGATCAACATCGCTGCCTTGGGCGGCTTTGTCTACTGGCTGGATGACAAAACCGGTGTGGAACGAATCACAGTCAATGGCGAAAGACGATCTGCTGAACTGCAGCGGCTACCTCAGATCACCGACATACGGGCCGTTTGGACGCCGGATCCGAAAGTGCTGCGASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................................AAGACGATCTGCTGAACTGCAGC...........................................................2311.0010000100
........................................................................................................................................................................................................................................................................................................................................................................................................AAACCGGTGTGGAACGAATCACA.............................................................................................2311.0010100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAACTGCAGCGGCTACCT...................................................2011.0010000010
....................................................................................................................................................................................................................................................................................................................................................................................TGTCTACTGGCTGGATGAC.....................................................................................................................1911.0011000000
..........................................................................................................................................................................................................................................................................................................................................................ATCAACATCGCTGCCTTGGGC.............................................................................................................................................2111.0010001000
.............................................................................................................................................................................................................................................................................................................................................................AACATCGCTGCCTTGGGCGG...........................................................................................................................................2011.0010000010
.......................................................................................................................................................................................................................................................................................................................................................................................CTACTGGCTGGATGACAA...................................................................................................................1820.5010000010

Generated: 06/08/2015 at 02:47 PM