dpe_489

CDS [Dper\GL24551-cds]; exon [dper_GLEANR_6833:1]; CDS [Dper\GL24551-cds]; exon [dper_GLEANR_6833:2]; intron [Dper\GL24551-in]

------------------################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------################################################## ACCTGCCTCTTTGTCACGATGATGGTCAACAATGAATCAATGCTCACGAAGTAAGTCCACGATCTTTCTATTTGCATTTGAAGTTATTAAGCCTCATTTAATTCAGGAATGGAAGTAAAGGAGGTGATGGTTTGGATGTCTATGGATCCACACACACGCATGCGGGTCAATGGCTGACTGGATTTCTCTTCGGGTACTTCTTGCACCTGAATCGTGGAAGGAAGCTCCAGCTAAGCCGCATCCAAGTTTAGGGCTCCTCCTCTAACCATACTCGAGGAGTCTCTCTACTACACGCTTACCC ***************************************************************************************************************************************************************************.........((.((((((((((.........)))))).....)).)).))****************************************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M021 embryo	M042 female body	V111 male body	V042 embryo	V057 head
.............................................................................................................................................................................CTGACTGGATTTCTCTTCGGGT..........................................................................................................	22	0	6	1.00	6	5	0	0	1	0
.......................................................................................................GAAGAATGGAAGTAAAGGAGGTGATG............................................................................................................................................................................	26	2	4	0.50	2	0	0	2	0	0
........................GTCAACAATGAATCAATGCT.................................................................................................................................................................................................................................................................	20	0	4	0.50	2	2	0	0	0	0
...........................................................................................................................................................................GGCTGACTGGATTTCTCTT...............................................................................................................	19	0	6	0.33	2	2	0	0	0	0
.................GATGATGGTCAACAATGAATC.......................................................................................................................................................................................................................................................................	21	0	6	0.33	2	2	0	0	0	0
....................................................................................................................................................................................................CTTCTTGCACCTGAATCGTGGAA..................................................................................	23	0	6	0.33	2	2	0	0	0	0
...........................................................................................................................................................................GGCTGACTGGATTTCTCTTCGG............................................................................................................	22	0	6	0.33	2	2	0	0	0	0
..CTGCCTCTTTGTCACGATG........................................................................................................................................................................................................................................................................................	19	0	6	0.33	2	2	0	0	0	0
.........................................................................................................................................................................ATGGCTGACTGGATTTCTCTTCGG............................................................................................................	24	0	6	0.33	2	2	0	0	0	0
.............................................................................................................................................................................CTGACTGGATTTCTCTTCGG............................................................................................................	20	0	6	0.17	1	0	0	0	1	0
..........................................................................................................................................................................................................GCACCTGAATCGTGGAAGGAA..............................................................................	21	0	6	0.17	1	0	1	0	0	0
.........................................................................................................................................................................ATGGCTGACTGGGTTTCTCTTCGG............................................................................................................	24	1	6	0.17	1	1	0	0	0	0
.............TCACGATGATGGTCAACAATGAAT........................................................................................................................................................................................................................................................................	24	0	6	0.17	1	0	1	0	0	0
.....................................................................................................................................................................................................TTCTTGCACCTGAATCGTGGAAGGA...............................................................................	25	0	6	0.17	1	0	1	0	0	0
........................................................................................................................................................................................................TTGCACCTGAATCGTGGAAGG................................................................................	21	0	6	0.17	1	0	1	0	0	0
..............................................................................................................................................................................TGACTGGATTTCTCTTCGG............................................................................................................	19	0	6	0.17	1	0	1	0	0	0
...........TGTCACGATGATGGTCAACAATGA..........................................................................................................................................................................................................................................................................	24	0	6	0.17	1	0	1	0	0	0
..........................................................................................................................................................................TGGCTGACGGGATTTCTCTTCGGGT..........................................................................................................	25	1	6	0.17	1	0	1	0	0	0
.........................................................................................................................................................................ATGGCTGACTGGATTTCTCTTCGGG...........................................................................................................	25	0	6	0.17	1	1	0	0	0	0
...........................................................................................................................................................................GGCTGACTGGATTTCTCTTC..............................................................................................................	20	0	6	0.17	1	1	0	0	0	0
.........................................................................................................................................................................ATGGCTGACTGGATTTCTCTTCGGGTA.........................................................................................................	27	0	6	0.17	1	0	1	0	0	0
.....................................................................................................................................................................................................................................................................CTAACCATACGCGAGAGGT.....................	19	3	8	0.13	1	0	0	0	0	1
.................................................................................................................................................................................................................AATCGAGGAAGGAAGCCC..........................................................................	18	2	9	0.11	1	0	0	0	0	1
...............................................................................................................GAAGCAAGGGGGGTGATGGT..........................................................................................................................................................................	20	3	11	0.09	1	0	0	0	1	0

TGGACGGAGAAACAGTGCTACTACCAGTTGTTACTTAGTTACGAGTGCTTCATTCAGGTGCTAGAAAGATAAACGTAAACTTCAATAATTCGGAGTAAATTAAGTCCTTACCTTCATTTCCTCCACTACCAAACCTACAGATACCTAGGTGTGTGTGCGTACGCCCAGTTACCGACTGACCTAAAGAGAAGCCCATGAAGAACGTGGACTTAGCACCTTCCTTCGAGGTCGATTCGGCGTAGGTTCAAATCCCGAGGAGGAGATTGGTATGAGCTCCTCAGAGAGATGATGTGCGAATGGG ****************************************************************************.........((.((((((((((.........)))))).....)).)).))***************************************************************************************************************************************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	V111 male body
..................................................................................CAATAGTGCGGAGTAGATT........................................................................................................................................................................................................	19	3	10	0.10	1	1
.............................................................................................................................................................................GCCTGAGCTAAAGAGAAGCCG...........................................................................................................	21	3	11	0.09	1	1
...............................................................................................................................................................................CTGAGCTAAAGAGATGCCGA..........................................................................................................	20	3	14	0.07	1	1
...............................................................................................................................................................................CTGAGCTAAAGAGATGCCG...........................................................................................................	19	3	20	0.05	1	1

Species	Coordinate	ID	Alignment
droPer2	scaffold_0:11772170-11772470 +	dpe_489	ACCTGCCTCTTTGTCACGATGATGGTCAACAATGAATCAATGCTCACGAAGTAAGT---CCACGATCTTT---------------------CT--ATTTGCATTTGA-----AGTTAT--------------------T-A------------AGCCTCATT---TA--ATTCAGGAATGGAAGTAAAG---GAGGTGA----------T---GGTTTGGATGTCTATGGATCCACACACACGCATGCGGGTCAATGGCTGACTGGATTTCTCTTCGGGTACTTCTTGCACCTGAATCGTGGAAGGAAGCTCCAGCTAAGCCGCAT-----------------------------------------------------------------------CCAAGTTTAGGGCTCCTCCTCTAACCATACTCGAGGAGTCTCTCTACTACACGCTTACCC
dp5	2:2913898-2914269 -		ACCTGCCTCTTTGTCACGATGATGGTCAACAATGAATCAATGCTCACGAAGTAAGT---CCACGATCTTT---------------------CT--ATTTGAATTTGA-----AGTTAT--------------------T-A------------AGCCTCATT---TC--ATTCAGGAATGGAAGTAAAG---GAGGTGA----------T---GGTTTGGATGTCTATGGATCCACACACACGCATGCGGGTCCATGGCTGACTGGATTTCTCTTCGGGTATTTCTTGCACCTGAATCGTGGAAGGAAGTTCCAGTTAAGTTGGATTATCGTGTGGTCTGGATGGCTGCTTAGCCTGGCCATGATCTTCACCTCAATCTTTGCCATGTATCCCGCATCCAAGTTTAGGGCTCCTCCTCTAACCATACTCGAGGAGTCTCTCTACTACACGCTTACCC
droWil2	scf2_1100000004943:2473929-2474318 -		GCATGCCTCTTTGCCACCATGATGATTGGCAAATATTCCCTCCAGTTCAAATTGTAAGTCCATTAGAATC--CA---------TGTTT---CG--ATCTCCTTT----------TTAT--------------------T-TGGCCT-------CCC-ATCCC---TC--TTTAAGGAA----TATGAAT---ATCATGCTAGCTGCGGAGTCGATGAAGAAACTTTATTTGGCAACACACACGCATGCAGCTCCCTGGCTAATTGGTTTCCTTTTTGGCTATTTTCTCCATTCGAGTCGTGGCAAAAGCTTCCAGCTAAACCGTTTGGTCATCTGGCTAGCTTGGATACTTAGTCTGGGTATGATTTTCACATCACTCTTTAGCAAATATTCCACTGCGCAGTGGAGAGCTCCGGCAATGTCGACTCTCGAGGAATCTTTTTATTATACACTCACCC
droVir3	scaffold_13047:9546618-9547002 +		GCCTGCCTCTTCAGCACGATGATGACCAATAAGTATCCCATTAATATGGAGTAAGT---TACTGGGCTTT-AAA---AGGCAT------CAAT--ATTGGTATTACT-----AATTAT--------------------T-T-------------GACTCTCT---CT--ATGCAGGCAAGGACTCCTCG---CTGGTGA----------AGGTCAACGCAAACTTTACTTTGCCACACACACGCATGCAGCTCCTTGGTTGATCGGCGCTCTGTTCGGCTATTTCCTGCATGTGAATCGCAACAAGAATTTTCAGCTGAGCCGCATTATGATCTGGCTAGGCTGGCTCATTAGCTTGACACTGATATTCACCTCTATATTCGCCCTCCACGCATCTGCTCAATGGTCTGCGCCAAACCTGACCTTGCTGGAGGCGGCCTCCTACTATACACTAAGCC
droMoj3	scaffold_6540:12118082-12118462 +		GCTTGCCTCTTCTGCACAATGATGACCGACAAGTACTACATTTATCTGGAGTAGGT---CCATTGGCTGTCCAATAGTTT---------A-GT--T----------------------------T-TTCGTA----CTATA------------TCTAGTTTT---CTTTTCACAGAAATGGAAAACTTT---CTGATGA----------GGCGCAACGCAAGATCTACTATGCCACTCATACACATGCAGCTCCTTGGCTGATCGGCGTGCTCTTTGGCTATTTCCTACATGTGAATCGCAGCAAGAAGTTTCAGCTGAATCGCATCGAGATCTGGATGGGTTGGATTGCGTCCCTGGTTCTGCTATTCACCTGTGTGTTTGCCTTGTATCCATCTGCCAAACTGAGAAGGCCAGCTCTATCCCTACTAAAGGAGTCGTCCTACTATACGTTCACCC
droGri2	scaffold_14906:2442395-2442775 +		GCCTGCCTCTTTAGCACAATGATGATTAAGAAGTATCCCATTCAAGTAGAGTAAGG---AGCTTACTTAA--GC------------TTTCTTT---------G-A------------T------TTCAGCTAATACGATTA------------T-TATCATA---TT--TTACAGAAATGGAGTCACGC---CTGACTT----------GGCTCAACGTAGGCTTTACTATGCAACACACGTGCATGCAGCTCCTTGGTTAATCGGAGCACTCTTCGGATATTTCGTGCATGTGAATCGCAACAAGTCCTTTCAACTGAATTGGATTGCGGTCTGCTTGGGCTGGCTGATCAGTTTGGGCTTGATGTTCACCGTGCTGTTTGTACTCTTACCATATGTCGATTTCTTAAATCCACATTTATCGATGTTGTCGGAGGCATCCTATTATACACTGGCCC
droAna3	scaffold_13340:20129662-20130036 +		GCCTGCCTCTTTGCCACAATGATGGTCAATGACTACTCAATGCTTATGAAGTATGC---ATAAATTTTGT---------------------TT---------A-TAGTCTAAGACTC-------T-CAACTA----CTTTC------------TATAATCTA---CT--TTACAGGAGAACTAGTGTAG---AT----------------GCCATGGCAAATATGTACTATGCAACTCACACCCATGCTGCTCCGTGGCTTATTGGATTTCTGTTTGGATACTTCCTTCACCTCAACAGGGCCAAGAAGTTCCAGCTAAACTGGATGATCGTGGGGCTGGGTTGGATCCTTAGCCTGGCCATGATCTTCACCTCAATCTTTGCTCTATATCCGTCAGGAAAGTGGATTGGTGCCTCCGTTTCCATTTTGGGCGAATCTTTCTACCACACCTTCACTA
droBip1	scf7180000396413:2277094-2277465 -		GGCTGTCTCTTTGCCACTCAAATGGTTAATAATTATTCTCTGCTTATTAGGTAAGT---ACTATTCCTGG--AA---------------TT-------------TAA---------------------CTCT----AAG-A------------ACTCTGATAATATC-ATTGCAGAAATGATGATGAAG---ACCGTGT----------GGCCAATAAAAATTTGTACTTTGCCACACACACCCACGCGGCACCTTGGCTGATTGGATTTCTTTTTGGATACTTCTTGCATCTGAATCGTGGCAAGAAGTTCCAGCTTTCAAAGTTAATGGTGTGGGCTGGTTGGCTTTTTAGCCTGACCATGCTCTTCACTTCGATTTTCGCCCTCTACCCAGCTGGTAAGTTTGATGCTCCGCCACTTTCTACATTGGCGGAATCCTTCTACTACACCCTGACCC
droKik1	scf7180000302639:3163823-3164202 +		GGCTGCCTGTTTGCCACACAGATGATCAACAAGTACTCACTACTCATTAAGTAAGT---AGCTCCCAAGTA-TA---CGATGT------TACA--A----------------------------T-TACCTA----ATA-A------------CAT-TTTAA---TT--GTTTAGAAATAACTCAGAAGTTACTGAAAT----------TGCCAATAAGAAACTGTACTTGGCCACGCACAGGCATGCTGCTCCCTGGCTGATTGGATTTCTGTTCGGTTACTTCCTTCATGTAAATCGAGGCATAAAGTTCCTGATAAGAAGGCCAATAGTGTGGACAGGATGGTTGCTAAGCCTGGCTATGATCTTCACCTCAATCTTTGCCCTCTATCCGGCGGCCCAATGGAGTGCTCCTCCTCTGTCCATCCTCGAGGAGTCCCTGTACTATACCCTCACCC
droFic1	scf7180000453906:394921-395300 +		GGTTGTCTGTTTGGCACCCAAATGGTCAACCATTATTCGATGAGTATAAAGTATGT---ATTGACTTTT--GAATTGAGGAGT------TATT--AT-----------------TTATTTATAAT----------------------------TAT-TTTAC---TT--TTATAGAAATGGCGGTGGTG---ATGATGA----------AGCAAATCGAAAGCTGTATTTGGCCACGCACACTCATGCTGCTCCTTGGCTGATTGGATTCCTGTTCGGTTACTTCCTGCACCTGAATCGTGGCAGGAAATTCGAAATGAGTCGACTGGTTGTTTGGTCCGGTTGGATCCTCAGCTTGGCCATGATCTTCACCTCAATTTTCGCGCTCTATCCTTCTGGAAAGTGGAGTGCTCCTCCTCTGCCAACTGTGGAGGAGTCCCTGTACTACACACTCACTC
droEle1	scf7180000491214:734597-734965 -		GCTTGCCTTTTTGCCACCATGATGGTGAATGACTACTCAATGACCTTTCAGTATGA---TGAAAAT--GA--CT---------TGTGCTGGTGTTAT-----------------TTGTTTAAA-------------------------------CCTCCTTT---CC--ATTTAGGAACTTGT---------CTGTCGA----------AGCCATGAAGCACATGTACCTTGCCACCCACACACATGCCACACCTTGGCTGATTGGATTTCTCTTCGGCTACTTTTTGCACCTGAACAAGGGCAAAAAGTTCCAGCTGAACTGGATGGCTGTGTGGGCGGGCTGGATCCTTTGTCTGGCCGTGATCTTCACCTCGATCTATGCCCCCTACCCGTCGGCCCAAAAGGGTGCTCCTGCCATGACGACCTTGGAGAACTCCTTCTACTACACCCTCACTC
droRho1	scf7180000777784:80921-81297 +		GGTTGCCTGTTTGCCACCCAGATGGTCAATCATTACTCAATGAGTATAAAGTATGT---CTTGAATGTGG--CG---------TAATTTG-AG----------A--------------------T-CACTTT----ACTTA------------TACCCTCTA---AA--TTGCAGAAATGGTGGTGGTG---ATGATGA----------GGCCAATCGAAAGCTTTACCTGGCCACGCACACACATGCTGCCCCTTGGCTGATTGGATTCCTGTTCGGCTACTTCCTGCACCTGAATCGTGGCAAGAAGTTCCAGATGAGCCGGCTGGTGGTATGGTCAGGATGGATCCTCAGCTTGGCCATGATCTTTACCTCGATCTTTGCTCTATATCCATCCGGAAAGTGGAGTGCTCCTGCGCTGCCCACTGTGGAGGAATCTCTTTACTACACTCTCACCC
droBia1	scf7180000302075:4958762-4959138 -		GCCTGCCTGTTTGCCACCCAGATGGTCAATCATTACACAATGAGTATTAAGTAAGT---CCTATTGATGTTCAAATGTTG------------T----------G--------------------T-TACCTT----ACTTA------------AACATTTTA---TT--TCACAGAAATGGTGGTGGCG---ATGATGA----------GGCCAATGCGAAGCTTTACCTGGCCACTCATACCCATGCTGCTCCCTGGCTGATTGGCTTCCTGTTTGGCTACTTCCTGCACCTGAATCGTGGCAAGAAATTCGAGTTGAGTCGGCTCGTTGTTTGGTCAGGATGGATCCTCTGCCTGGCCATGATCTTCACCTCGATCTTCGCCCTCTATCCGTCCGGCAAGTGGAGTGCTCCGCCTCTGCCAACTGTGGAGGAGTCTGTGTACTACACCCTCACCC
droTak1	scf7180000415765:1518290-1518666 +		GCTTGCCTGTTTGCCACCCAGATGGTCAATCATTACTCAATGAGTATAAAGTATGT---ACCATTGTCAT--AA------------TTTTTCC----------G--------------------G-CACTTT----ACTTA------------CCCCTTTAA-TTTT--GTGCAGAAATGGTGGTGGCG---ATGATGA----------GGCCAATTCAAAGCTTTACCTGGCCACTCATACACATGCTGCCCCTTGGCTGATTGGCTTCCTGTTCGGTTACTTCCTGCACCTGAATCGTGGCAAAAAGTTCGAGTTGAGTCGGCTGGTCGTGTGGTCGGGTTGGATCCTCAGCCTGGCCATGATTTTTACCTCGATCTTTGCTCTCTATCCGTCCGGAAAGTGGAGTGCTCCACCGCTACCGACAGTGGAGGAATCTCTGTACTACACCCTGACTC
droEug1	scf7180000409798:983076-983452 +		GGTTGCCTGTTTGCCACCCAGATGGTCAATCATTACTCGATGAGTATTAAGTATGT---CCTTGAATAGA--CT---------TGATTTGACA----------G--------------------T-CACTTT----ATTGA------------GAC-CTTTA---CT--TTGCAGGAATGGCGGTGGCG---ATGATGA----------AGCCAATTCAAAGTTGTATTTGGCCACACATACACATGCTGCTCCTTGGCTGATTGGATTCCTGTTCGGCTACTTCCTGCACTTAAATCGTGGCAGGAAGTTCGAGTTGAGTCGTTTGGTTGTTTGGTCTGGTTGGCTCTTCAGTCTGGCCATGATCTTCACCTCGATCTTTGCCCTCTATCCATCTGGAAAGTGGAGTGCCCCCCCTCTGTCAACTGTGGAGGAATCTGTTTACTACACCTTCACTC
dm3	chr3R:19422738-19423106 -		---TGCCTGTTTGCCACCCAAATGGTCAATCATTACTCAATGAGTATTAAGTATGT---CCTTTTACCGC--TA---------------TGCA----------G--------------------T-CACTTT----ATTTA------------CGCCTGTTA---TT--TTGCAGAAATGGTGGTGGCG---ATGATGA----------AGCCAACTCAAAGCTGTACCTTGCCACGCACACACATGCAACTCCTTGGCTGATTGGATTCCTGTTCGGATACTTTCTGCACATGAATCGTGGCAGAAAGTTCCAGCTGAGCTGGCTGGTCCTGTGGTCTGGTTGGTTCATCAGCCTGGCGATGATCTTCACCTCGATCTTTGCAACCTATCCGTCTGCGAAGTGGAGTGCTCCTCCGCTATCTACCTTGGATGAATCTCTGTACTACACTCTCACTC
droSim2	3r:18973317-18973685 -		---TGTCTGTTTGCCACCCAAATGGTCAATCATTACTCAATGAGTATTAAGTATGT---CCTTGTACCTC--CA---------------TGCA----------G--------------------T-CACTTT----ACTTA------------CTCCTGTTA---TT--TTGCAGAAATGGTGGTGGCG---ATGATGA----------AGCCAACTCAAAGCTGTACCTTGCCACGCACACACATGCGGCTCCTTGGCTGATTGGATTTCTGTTCGGATACTTCCTGCACCTGAATCGTGGCAGAAAGTTCCAGATTAGCTGGCTGGTACTATGGTTGGGTTGGATCATCAGCTTGGCGATGTTCCTTACCTCGATCTTTGCAACCTATCCGTCTGCGAAGTGGAGTGCTCCTCCGCTCTCCACCTTGGAGGAATCTCTGTACTACACTCTCACTC
droSec2	scaffold_1:6539348-6539716 +		GCCTGTCTATTTGCCACCCTGATGGTCAATGGATATACAATGATGATCACGTAAGT---CATACTTTTTG--GT---------------------A------T-TAAGATCAAGTTCT-------------T----ACAT--------------AACCCTTT---CT--ATCCAGGACTGCCTCTC---------CAGA----------AGCCATGCGAGATGGGTACTATGCAACCCATACTCATGCTACACCCTGGCTGATAGGATTCCTCTTCGGATACTTCCTGCATCTGAACAGAGGGAAGAAGTTCCAGCTCAGCTGGGTAGCCGTGTGGTCAGGATGGATCCTCTGTCTGGCCATGATCTTCACATCGATCTTTGCCCTGTATCCGCCGTCCAAGTTGTCTGGACCTGACGCGTCCACCTTGGCGGAGTCTTTATACTACACTTTAACCA
droYak3	3R:20316085-20316453 -		---TGCCTGTTTGCCACCCAAATGGTCAATCATTACTCAATGAGTATTAAGTATGT---TCTTGCAACGC--CT---------------TGCT----------G--------------------T-CAACTT----ATTAA------------CCGCTGATA---TC--TTACAGAAATGGTGGTGGCG---ATGATGA----------GGCCAACTCAAAGTTGTACCTGGCCACGCACACACATGCGGCTCCTTGGCTGATTGGATTCCTGTTCGGATACTTCCTGCACCTGAATCGTGGCAGAAAGTTCCAGTTGAGTCGACTGGTCGTGTGGTCGGGTTGGCTCCTCAGCCTGGCCATGATCTTCACCTCGATTTTTGCACTTTATCCGTCTGCCAAGTGGAGTGCTCCTCCTCTTTCCACGCTGGAGGAATCTCTGTACTACACTCTCACTC
droEre2	scaffold_4820:8630284-8630655 +		GGCTGTCTCTTTGCCACCATAATGGTCAACAAATACTCCTTGGTGCTCAAGTATGA---ACGACTACTCC--CA---------------TTTC----------G--------------------A-GAATTC----GTTTT-----TCATACCGTG-TATGT---TT--GTGTAGGAAGTTTTCAG---------CGGA----------TGCGCAAAAGGATCTGTATTATGCCACCCACACCCATGCTACGCCTTGGTTGATAGGATTCCTCTTCGGCTGCATTCTACACATGAACAGGGGAAAGAAGTTTCAGCTCAGCAGGATAGTCGTGTGGTCGGGATGGATCCTTTGCCTGGCCATGATCTTCACCTCGATCTTCGCCCTCTACCCGTACGCCAAGTGGTTTGGTCCAGAGCTGTCCACCTTTGCGGAGGCTTCCTACTACACTCTAACTC

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droPer2

ACCTGCCTCTTTGTCACGATGATGGTCAACAATGAATCAATGCTCACGAAGTAAGT---CCACGATCTTT---------------------CT--ATTTGCATTTGA-----AGTTAT--------------------T-A------------AGCCTCATT---TA--ATTCAGGAATGGAAGTAAAG---GAGGTGA----------T---GGTTTGGATGTCTATGGATCCACACACACGCATGCGGGTCAATGGCTGACTGGATTTCTCTTCGGGTACTTCTTGCACCTGAATCGTGGAAGGAAGCTCCAGCTAAGCCGCAT-----------------------------------------------------------------------CCAAGTTTAGGGCTCCTCCTCTAACCATACTCGAGGAGTCTCTCTACTACACGCTTACCC	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
..................................................................................................................................................................................................................................................................CTGACTGGATTTCTCTTCGGGT.................................................................................................................................................................................	22	6	1.00	6	5	0	1	0	0	0
........................GTCAACAATGAATCAATGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................	20	4	0.50	2	2	0	0	0	0	0
................................................................................................................................................................................................................................................................GGCTGACTGGATTTCTCTT......................................................................................................................................................................................	19	6	0.33	2	2	0	0	0	0	0
.................GATGATGGTCAACAATGAATC...................................................................................................................................................................................................................................................................................................................................................................................................................................	21	6	0.33	2	2	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................CTTCTTGCACCTGAATCGTGGAA.........................................................................................................................................................	23	6	0.33	2	2	0	0	0	0	0
................................................................................................................................................................................................................................................................GGCTGACTGGATTTCTCTTCGG...................................................................................................................................................................................	22	6	0.33	2	2	0	0	0	0	0
..CTGCCTCTTTGTCACGATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	6	0.33	2	2	0	0	0	0	0
..............................................................................................................................................................................................................................................................ATGGCTGACTGGATTTCTCTTCGG...................................................................................................................................................................................	24	6	0.33	2	2	0	0	0	0	0
..................................................................................................................................................................................................................................................................CTGACTGGATTTCTCTTCGG...................................................................................................................................................................................	20	6	0.17	1	0	0	1	0	0	0
...............................................................................................................................................................................................................................................................................................GCACCTGAATCGTGGAAGGAA.....................................................................................................................................................	21	6	0.17	1	0	1	0	0	0	0
.............TCACGATGATGGTCAACAATGAAT....................................................................................................................................................................................................................................................................................................................................................................................................................................	24	6	0.17	1	0	1	0	0	0	0
..........................................................................................................................................................................................................................................................................................TTCTTGCACCTGAATCGTGGAAGGA......................................................................................................................................................	25	6	0.17	1	0	1	0	0	0	0
.............................................................................................................................................................................................................................................................................................TTGCACCTGAATCGTGGAAGG.......................................................................................................................................................	21	6	0.17	1	0	1	0	0	0	0
...................................................................................................................................................................................................................................................................TGACTGGATTTCTCTTCGG...................................................................................................................................................................................	19	6	0.17	1	0	1	0	0	0	0
...........TGTCACGATGATGGTCAACAATGA......................................................................................................................................................................................................................................................................................................................................................................................................................................	24	6	0.17	1	0	1	0	0	0	0
..............................................................................................................................................................................................................................................................ATGGCTGACTGGATTTCTCTTCGGG..................................................................................................................................................................................	25	6	0.17	1	1	0	0	0	0	0
................................................................................................................................................................................................................................................................GGCTGACTGGATTTCTCTTC.....................................................................................................................................................................................	20	6	0.17	1	1	0	0	0	0	0
..............................................................................................................................................................................................................................................................ATGGCTGACTGGATTTCTCTTCGGGTA................................................................................................................................................................................	27	6	0.17	1	0	1	0	0	0	0

dp5

ACCTGCCTCTTTGTCACGATGATGGTCAACAATGAATCAATGCTCACGAAGTAAGT---CCACGATCTTT---------------------CT--ATTTGAATTTGA-----AGTTAT--------------------T-A------------AGCCTCATT---TC--ATTCAGGAATGGAAGTAAAG---GAGGTGA----------T---GGTTTGGATGTCTATGGATCCACACACACGCATGCGGGTCCATGGCTGACTGGATTTCTCTTCGGGTATTTCTTGCACCTGAATCGTGGAAGGAAGTTCCAGTTAAGTTGGATTATCGTGTGGTCTGGATGGCTGCTTAGCCTGGCCATGATCTTCACCTCAATCTTTGCCATGTATCCCGCATCCAAGTTTAGGGCTCCTCCTCTAACCATACTCGAGGAGTCTCTCTACTACACGCTTACCC	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
..................................................................................................................................................................................................................................................................................................................................................................CTGGCCATGATCTTCACCTC...................................................................................	20	2	8.50	17	0	16	1	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................TGCTTAGCCTGGCCATGATCTTCACCTC...................................................................................	28	2	7.50	15	0	14	1	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................TATCGTGTGGTCTGGATGGC...............................................................................................................	20	2	6.00	12	0	9	0	0	2	0	1	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................AATCTTTGCCATGTATCCCGC..............................................................	21	2	4.50	9	0	9	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................ATCGTGTGGTCTGGATGGC...............................................................................................................	19	2	3.00	6	0	5	0	0	0	0	1	0	0	0
..........................................................................................................................................................................................................................................................................................................................GTTAAGTTGGATTATCGTGTGGTCTGG....................................................................................................................	27	2	2.50	5	0	5	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................TATCGTGTGGTCTGGATGG................................................................................................................	19	2	2.00	4	0	4	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................CCTGGCCATGATCTTCACCTC...................................................................................	21	2	2.00	4	0	4	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................GTCTGGATGGCTGCTTAGC.......................................................................................................	19	2	2.00	4	0	3	1	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................ATCGTGTGGTCTGGATGG................................................................................................................	18	2	2.00	4	0	4	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................CTGCTTAGCCTGGCCATGATCTTCACCTC...................................................................................	29	2	1.50	3	0	3	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................AATCGTGGAAGGAAGTTCCA...............................................................................................................................................	20	2	1.50	3	0	0	0	0	0	0	3	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................TGGCCATGATCTTCACCTC...................................................................................	19	2	1.50	3	0	2	0	0	1	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................CTTTGCCATGTATCCCGCATC...........................................................	21	2	1.50	3	0	2	1	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................ATTATCGTGTGGTCTGGATGGC...............................................................................................................	22	2	1.50	3	0	2	0	0	0	0	1	0	0	0
.....................................................................................................................................................................................................................................................................................................................................TTATCGTGTGGTCTGGATGGC...............................................................................................................	21	2	1.50	3	0	1	0	0	1	0	1	0	0	0
......................................................................................................................................................................................................................................................................................................................................TATCGTGTGGTCTGGATG.................................................................................................................	18	2	1.50	3	0	3	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................TTATCGTGTGGTCTGGATG.................................................................................................................	19	2	1.00	2	0	1	1	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................ATTATCGTGTGGTCTGGATG.................................................................................................................	20	2	1.00	2	0	2	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................TCTTGCACCTGAATCGTGGA..........................................................................................................................................................	20	2	1.00	2	0	2	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................GA----------T---GGTTTGGATGTCTATGGATCC...............................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	1	0	0	0	0	0
.............................................................................................................................................................................................................................................CACACGCATGCGGGTCCATGGCT.....................................................................................................................................................................................................	23	2	1.00	2	0	2	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................TAAGTTGGATTATCGTGTGGTCTGGATG.................................................................................................................	28	2	1.00	2	0	2	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................CTGGCCATGATCTTCACCTCAAT................................................................................	23	2	1.00	2	0	2	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................GA----------T---GGTTTGGATGTCTATGG...................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	1	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................GATTATCGTGTGGTCTGGATG.................................................................................................................	21	2	1.00	2	0	2	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................GTTAAGTTGGATTATCGTGT...........................................................................................................................	20	2	1.00	2	0	2	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................ACACACGCATGCGGGTCCATGG.......................................................................................................................................................................................................	22	2	1.00	2	0	1	0	0	1	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................AATCGTGGAAGGAAGTTCCAGT.............................................................................................................................................	22	2	1.00	2	0	2	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................TGCTTAGCCTGGCCATGATCTTCACCT....................................................................................	27	2	1.00	2	0	1	0	0	1	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................GGATGGCTGCTTAGCCTGGC..................................................................................................	20	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................CACACGCATGCGGGTCCATGG.......................................................................................................................................................................................................	21	2	0.50	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................ACGCATGCGGGTCCATGGCTGACTGGA..............................................................................................................................................................................................	27	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTCGAGGAGTCTCTCTAC.............	21	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................CGCATGCGGGTCCATGGCTGACTGGA..............................................................................................................................................................................................	26	2	0.50	1	0	0	1	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................GGAAGTTCCAGTTAAGTTG......................................................................................................................................	19	2	0.50	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................TTAAGTTGGATTATCGTGTGGTCTGG....................................................................................................................	26	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................GGCTGCTTAGCCTGGCCATGATCTTCAC......................................................................................	28	2	0.50	1	0	0	1	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................CACACACACGCATGCGGGTC............................................................................................................................................................................................................	20	2	0.50	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................CACCTGAATCGTGGAAGGA......................................................................................................................................................	19	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................GGTCCATGGCTGACTGGA..............................................................................................................................................................................................	18	2	0.50	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................TCTTGCACCTGAATCGTGG...........................................................................................................................................................	19	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................TGCACCTGAATCGTGGAAGGA......................................................................................................................................................	21	2	0.50	1	0	0	1	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................AGGAAGTTCCAGTTAAGTTGGAT...................................................................................................................................	23	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................CTGCTTAGCCTGGCCATGAT............................................................................................	20	2	0.50	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................GGGTCCATGGCTGACTGGA..............................................................................................................................................................................................	19	2	0.50	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................AATCGTGGAAGGAAGTTCC................................................................................................................................................	19	2	0.50	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................CACCTCAATCTTTGCCATGTATCCCG...............................................................	26	2	0.50	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................ATTATCGTGTGGTCTGGAT..................................................................................................................	19	2	0.50	1	0	0	0	0	1	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................CTGAATCGTGGAAGGAAGTT..................................................................................................................................................	20	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................CGTGTGGTCTGGATGGCT..............................................................................................................	18	2	0.50	1	0	1	0	0	0	0	0	0	0	0
........................GTCAACAATGAATCAATGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................	20	2	0.50	1	0	0	0	0	1	0	0	0	0	0
............................................................................................................................................................................................................................................ACACACGCATGCGGGTCCAT.........................................................................................................................................................................................................	20	2	0.50	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................CACGCATGCGGGTCCATGGCTGACTGGA..............................................................................................................................................................................................	28	2	0.50	1	0	0	1	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................ATTATCGTGTGGTCTGGATGGCTG.............................................................................................................	24	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................GGATTATCGTGTGGTCTGGATG.................................................................................................................	22	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................TGCACCTGAATCGTGGAAG........................................................................................................................................................	19	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................TGGATGGCTGCTTAGCCTGGC..................................................................................................	21	2	0.50	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................TATCGTGTGGTCTGGATGGCTGCTTAGCC......................................................................................................	29	2	0.50	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................GCTGCTTAGCCTGGCCAT...............................................................................................	18	2	0.50	1	0	0	1	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................GAAGGAAGTTCCAGTTAAGTTG......................................................................................................................................	22	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................TGGATGGCTGCTTAGCCTGGCCATG..............................................................................................	25	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................GCATGCGGGTCCATGGCTGACTGGA..............................................................................................................................................................................................	25	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................ACCTCAATCTTTGCCATGTATCCCGC..............................................................	26	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................AGTTAAGTTGGATTATCGT.............................................................................................................................	19	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................AGTTGGATTATCGTGTGGTCTGGATG.................................................................................................................	26	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................TGCTTAGCCTGGCCATGATCTT.........................................................................................	22	2	0.50	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................GATTATCGTGTGGTCTGG....................................................................................................................	18	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................TTATCGTGTGGTCTGGATGG................................................................................................................	20	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................GGCTGCTTAGCCTGGCCATGATCTTCA.......................................................................................	27	2	0.50	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................TATCGTGTGGTCTGGATGGCTGCTTAGC.......................................................................................................	28	2	0.50	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................CTTGCACCTGAATCGTGGAA.........................................................................................................................................................	20	2	0.50	1	0	0	0	0	1	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGAGGAGTCTCTCTACT............	19	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................ACACGCATGCGGGTCCATG........................................................................................................................................................................................................	19	2	0.50	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................CTGAATCGTGGAAGGAAG....................................................................................................................................................	18	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................GGTCTGGATGGCTGCTTAGC.......................................................................................................	20	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................TGCACCTGAATCGTGGAAGGAA.....................................................................................................................................................	22	2	0.50	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................CACCTGAATCGTGGAAGGAA.....................................................................................................................................................	20	2	0.50	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................GATTATCGTGTGGTCTGGATGGC...............................................................................................................	23	2	0.50	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................CACACACGCATGCGGGTCCATGGCTG....................................................................................................................................................................................................	26	2	0.50	1	0	0	0	0	0	0	1	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................TGCTTAGCCTGGCCATGATCTTCACCTCA..................................................................................	29	2	0.50	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................GATTATCGTGTGGTCTGGATGGCTGCTT..........................................................................................................	28	2	0.50	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................GTTGGATTATCGTGTGGTCTG.....................................................................................................................	21	2	0.50	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................ATGCGGGTCCATGGCTGACTGGA..............................................................................................................................................................................................	23	2	0.50	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................GTTGGATTATCGTGTGGTCTGG....................................................................................................................	22	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................TGCTTAGCCTGGCCATGAT............................................................................................	19	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................TTATCGTGTGGTCTGGAT..................................................................................................................	18	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................TGCTTAGCCTGGCCATGATC...........................................................................................	20	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................GTTAAGTTGGATTATCGTGTG..........................................................................................................................	21	2	0.50	1	0	0	1	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................GGCTGCTTAGCCTGGCCATGATCTT.........................................................................................	25	2	0.50	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................ATTATCGTGTGGTCTGGATT.................................................................................................................	20	2	0.50	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................GATTATCGTGTGGTCTGGAT..................................................................................................................	20	2	0.50	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................TAAGTTGGATTATCGTGT...........................................................................................................................	18	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................GTTAAGTTGGATTATCGTGTGGTCTG.....................................................................................................................	26	2	0.50	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................CACACACGCATGCGGGTCCATGGCT.....................................................................................................................................................................................................	25	2	0.50	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................ATGCGGGTCCATGGCTGACTGG...............................................................................................................................................................................................	22	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................CCTGGCCATGATCTTCACCTCAAT................................................................................	24	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................GGTCTGGATGGCTGCTTAGCCTGGC..................................................................................................	25	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................CTTTGCCATGTATCCCGCATCCAAGTT.....................................................	27	2	0.50	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................ATTATCGTGTGGTCTGGATGG................................................................................................................	21	2	0.50	1	0	0	0	0	0	0	1	0	0	0
..................................................................................................................................................................................................................................................................................................................................GGATTATCGTGTGGTCTGG....................................................................................................................	19	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................ATCGTGTGGTCTGGATGGCTGCTTAGC.......................................................................................................	27	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................AAGTTGGATTATCGTGTGGT........................................................................................................................	20	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.................GATGATGGTCAACAATGAATCA..................................................................................................................................................................................................................................................................................................................................................................................................................................	22	3	0.33	1	0	1	0	0	0	0	0	0	0	0
..............CACGATGATGGTCAACAAT........................................................................................................................................................................................................................................................................................................................................................................................................................................	19	3	0.33	1	0	1	0	0	0	0	0	0	0	0
..CTGCCTCTTTGTCACGATGATGGTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................	25	3	0.33	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTCTCTACTACACGCTT....	19	3	0.33	1	0	1	0	0	0	0	0	0	0	0
....................GATGGTCAACAATGAATCA..................................................................................................................................................................................................................................................................................................................................................................................................................................	19	3	0.33	1	0	1	0	0	0	0	0	0	0	0
...TGCCTCTTTGTCACGATGATGGTCAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................	27	3	0.33	1	0	1	0	0	0	0	0	0	0	0
....GCCTCTTTGTCACGATGATG.................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	3	0.33	1	0	1	0	0	0	0	0	0	0	0
................CGATGATGGTCAACAATGAAT....................................................................................................................................................................................................................................................................................................................................................................................................................................	21	3	0.33	1	0	1	0	0	0	0	0	0	0	0

droWil2

GCATGCCTCTTTGCCACCATGATGATTGGCAAATATTCCCTCCAGTTCAAATTGTAAGTCCATTAGAATC--CA---------TGTTT---CG--ATCTCCTTT----------TTAT--------------------T-TGGCCT-------CCC-ATCCC---TC--TTTAAGGAA----TATGAAT---ATCATGCTAGCTGCGGAGTCGATGAAGAAACTTTATTTGGCAACACACACGCATGCAGCTCCCTGGCTAATTGGTTTCCTTTTTGGCTATTTTCTCCATTCGAGTCGTGGCAAAAGCTTCCAGCTAAACCGTTTGGTCATCTGGCTAGCTTGGATACTTAGTCTGGGTATGATTTTCACATCACTCTTTAGCAAATATTCCACTGCGCAGTGGAGAGCTCCGGCAATGTCGACTCTCGAGGAATCTTTTTATTATACACTCACCC	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
.....................................................................................................................................................................................................................................................................ATTGGTTTCCTTTTTGGCT.................................................................................................................................................................................	19	1	1.00	1	0	0	0	1	0
.....................................................................................................................................................................................................................................................................ATTGGTTTCCTTTTTGGC..................................................................................................................................................................................	18	1	1.00	1	0	0	0	1	0

droVir3

GCCTGCCTCTTCAGCACGATGATGACCAATAAGTATCCCATTAATATGGAGTAAGT---TACTGGGCTTT-AAA---AGGCAT------CAAT--ATTGGTATTACT-----AATTAT--------------------T-T-------------GACTCTCT---CT--ATGCAGGCAAGGACTCCTCG---CTGGTGA----------AGGTCAACGCAAACTTTACTTTGCCACACACACGCATGCAGCTCCTTGGTTGATCGGCGCTCTGTTCGGCTATTTCCTGCATGTGAATCGCAACAAGAATTTTCAGCTGAGCCGCATTATGATCTGGCTAGGCTGGCTCATTAGCTTGACACTGATATTCACCTCTATATTCGCCCTCCACGCATCTGCTCAATGGTCTGCGCCAAACCTGACCTTGCTGGAGGCGGCCTCCTACTATACACTAAGCC	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
.........................................................................................................................................................................................................................................................................................................................................GATCTGGCTAGGCTGGCT..............................................................................................................	18	2	0.50	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

GCTTGCCTCTTCTGCACAATGATGACCGACAAGTACTACATTTATCTGGAGTAGGT---CCATTGGCTGTCCAATAGTTT---------A-GT--T----------------------------T-TTCGTA----CTATA------------TCTAGTTTT---CTTTTCACAGAAATGGAAAACTTT---CTGATGA----------GGCGCAACGCAAGATCTACTATGCCACTCATACACATGCAGCTCCTTGGCTGATCGGCGTGCTCTTTGGCTATTTCCTACATGTGAATCGCAGCAAGAAGTTTCAGCTGAATCGCATCGAGATCTGGATGGGTTGGATTGCGTCCCTGGTTCTGCTATTCACCTGTGTGTTTGCCTTGTATCCATCTGCCAAACTGAGAAGGCCAGCTCTATCCCTACTAAAGGAGTCGTCCTACTATACGTTCACCC	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
No Reads

droGri2

GCCTGCCTCTTTAGCACAATGATGATTAAGAAGTATCCCATTCAAGTAGAGTAAGG---AGCTTACTTAA--GC------------TTTCTTT---------G-A------------T------TTCAGCTAATACGATTA------------T-TATCATA---TT--TTACAGAAATGGAGTCACGC---CTGACTT----------GGCTCAACGTAGGCTTTACTATGCAACACACGTGCATGCAGCTCCTTGGTTAATCGGAGCACTCTTCGGATATTTCGTGCATGTGAATCGCAACAAGTCCTTTCAACTGAATTGGATTGCGGTCTGCTTGGGCTGGCTGATCAGTTTGGGCTTGATGTTCACCGTGCTGTTTGTACTCTTACCATATGTCGATTTCTTAAATCCACATTTATCGATGTTGTCGGAGGCATCCTATTATACACTGGCCC	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
.............................................................................................................................................................................................................................................................CTTGGTTAATCGGAGCACTC........................................................................................................................................................................................	20	1	1.00	1	1	0

droAna3

GCCTGCCTCTTTGCCACAATGATGGTCAATGACTACTCAATGCTTATGAAGTATGC---ATAAATTTTGT---------------------TT---------A-TAGTCTAAGACTC-------T-CAACTA----CTTTC------------TATAATCTA---CT--TTACAGGAGAACTAGTGTAG---AT----------------GCCATGGCAAATATGTACTATGCAACTCACACCCATGCTGCTCCGTGGCTTATTGGATTTCTGTTTGGATACTTCCTTCACCTCAACAGGGCCAAGAAGTTCCAGCTAAACTGGATGATCGTGGGGCTGGGTTGGATCCTTAGCCTGGCCATGATCTTCACCTCAATCTTTGCTCTATATCCGTCAGGAAAGTGGATTGGTGCCTCCGTTTCCATTTTGGGCGAATCTTTCTACCACACCTTCACTA	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
......................................................................................................................................................................................................................................................GCTGCTCCGTGGCTTATTGGAT.............................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0
...........................................................................................................................................................................................................................................CTCACACCCATGCTGCTCCGC.........................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0

droBip1

GGCTGTCTCTTTGCCACTCAAATGGTTAATAATTATTCTCTGCTTATTAGGTAAGT---ACTATTCCTGG--AA---------------TT-------------TAA---------------------CTCT----AAG-A------------ACTCTGATAATATC-ATTGCAGAAATGATGATGAAG---ACCGTGT----------GGCCAATAAAAATTTGTACTTTGCCACACACACCCACGCGGCACCTTGGCTGATTGGATTTCTTTTTGGATACTTCTTGCATCTGAATCGTGGCAAGAAGTTCCAGCTTTCAAAGTTAATGGTGTGGGCTGGTTGGCTTTTTAGCCTGACCATGCTCTTCACTTCGATTTTCGCCCTCTACCCAGCTGGTAAGTTTGATGCTCCGCCACTTTCTACATTGGCGGAATCCTTCTACTACACCCTGACCC	Size	Hit Count	Total Norm	Total
No Reads

droKik1

GGCTGCCTGTTTGCCACACAGATGATCAACAAGTACTCACTACTCATTAAGTAAGT---AGCTCCCAAGTA-TA---CGATGT------TACA--A----------------------------T-TACCTA----ATA-A------------CAT-TTTAA---TT--GTTTAGAAATAACTCAGAAGTTACTGAAAT----------TGCCAATAAGAAACTGTACTTGGCCACGCACAGGCATGCTGCTCCCTGGCTGATTGGATTTCTGTTCGGTTACTTCCTTCATGTAAATCGAGGCATAAAGTTCCTGATAAGAAGGCCAATAGTGTGGACAGGATGGTTGCTAAGCCTGGCTATGATCTTCACCTCAATCTTTGCCCTCTATCCGGCGGCCCAATGGAGTGCTCCTCCTCTGTCCATCCTCGAGGAGTCCCTGTACTATACCCTCACCC	Size	Hit Count	Total Norm	Total
No Reads

droFic1

GGTTGTCTGTTTGGCACCCAAATGGTCAACCATTATTCGATGAGTATAAAGTATGT---ATTGACTTTT--GAATTGAGGAGT------TATT--AT-----------------TTATTTATAAT----------------------------TAT-TTTAC---TT--TTATAGAAATGGCGGTGGTG---ATGATGA----------AGCAAATCGAAAGCTGTATTTGGCCACGCACACTCATGCTGCTCCTTGGCTGATTGGATTCCTGTTCGGTTACTTCCTGCACCTGAATCGTGGCAGGAAATTCGAAATGAGTCGACTGGTTGTTTGGTCCGGTTGGATCCTCAGCTTGGCCATGATCTTCACCTCAATTTTCGCGCTCTATCCTTCTGGAAAGTGGAGTGCTCCTCCTCTGCCAACTGTGGAGGAGTCCCTGTACTACACACTCACTC	Size	Hit Count	Total Norm	Total
No Reads

droEle1

GCTTGCCTTTTTGCCACCATGATGGTGAATGACTACTCAATGACCTTTCAGTATGA---TGAAAAT--GA--CT---------TGTGCTGGTGTTAT-----------------TTGTTTAAA-------------------------------CCTCCTTT---CC--ATTTAGGAACTTGT---------CTGTCGA----------AGCCATGAAGCACATGTACCTTGCCACCCACACACATGCCACACCTTGGCTGATTGGATTTCTCTTCGGCTACTTTTTGCACCTGAACAAGGGCAAAAAGTTCCAGCTGAACTGGATGGCTGTGTGGGCGGGCTGGATCCTTTGTCTGGCCGTGATCTTCACCTCGATCTATGCCCCCTACCCGTCGGCCCAAAAGGGTGCTCCTGCCATGACGACCTTGGAGAACTCCTTCTACTACACCCTCACTC	Size	Hit Count	Total Norm	Total
No Reads

droRho1

GGTTGCCTGTTTGCCACCCAGATGGTCAATCATTACTCAATGAGTATAAAGTATGT---CTTGAATGTGG--CG---------TAATTTG-AG----------A--------------------T-CACTTT----ACTTA------------TACCCTCTA---AA--TTGCAGAAATGGTGGTGGTG---ATGATGA----------GGCCAATCGAAAGCTTTACCTGGCCACGCACACACATGCTGCCCCTTGGCTGATTGGATTCCTGTTCGGCTACTTCCTGCACCTGAATCGTGGCAAGAAGTTCCAGATGAGCCGGCTGGTGGTATGGTCAGGATGGATCCTCAGCTTGGCCATGATCTTTACCTCGATCTTTGCTCTATATCCATCCGGAAAGTGGAGTGCTCCTGCGCTGCCCACTGTGGAGGAATCTCTTTACTACACTCTCACCC	Size	Hit Count	Total Norm	Total
No Reads

droBia1

GCCTGCCTGTTTGCCACCCAGATGGTCAATCATTACACAATGAGTATTAAGTAAGT---CCTATTGATGTTCAAATGTTG------------T----------G--------------------T-TACCTT----ACTTA------------AACATTTTA---TT--TCACAGAAATGGTGGTGGCG---ATGATGA----------GGCCAATGCGAAGCTTTACCTGGCCACTCATACCCATGCTGCTCCCTGGCTGATTGGCTTCCTGTTTGGCTACTTCCTGCACCTGAATCGTGGCAAGAAATTCGAGTTGAGTCGGCTCGTTGTTTGGTCAGGATGGATCCTCTGCCTGGCCATGATCTTCACCTCGATCTTCGCCCTCTATCCGTCCGGCAAGTGGAGTGCTCCGCCTCTGCCAACTGTGGAGGAGTCTGTGTACTACACCCTCACCC	Size	Hit Count	Total Norm	Total
No Reads

droTak1

GCTTGCCTGTTTGCCACCCAGATGGTCAATCATTACTCAATGAGTATAAAGTATGT---ACCATTGTCAT--AA------------TTTTTCC----------G--------------------G-CACTTT----ACTTA------------CCCCTTTAA-TTTT--GTGCAGAAATGGTGGTGGCG---ATGATGA----------GGCCAATTCAAAGCTTTACCTGGCCACTCATACACATGCTGCCCCTTGGCTGATTGGCTTCCTGTTCGGTTACTTCCTGCACCTGAATCGTGGCAAAAAGTTCGAGTTGAGTCGGCTGGTCGTGTGGTCGGGTTGGATCCTCAGCCTGGCCATGATTTTTACCTCGATCTTTGCTCTCTATCCGTCCGGAAAGTGGAGTGCTCCACCGCTACCGACAGTGGAGGAATCTCTGTACTACACCCTGACTC	Size	Hit Count	Total Norm	Total
No Reads

droEug1

GGTTGCCTGTTTGCCACCCAGATGGTCAATCATTACTCGATGAGTATTAAGTATGT---CCTTGAATAGA--CT---------TGATTTGACA----------G--------------------T-CACTTT----ATTGA------------GAC-CTTTA---CT--TTGCAGGAATGGCGGTGGCG---ATGATGA----------AGCCAATTCAAAGTTGTATTTGGCCACACATACACATGCTGCTCCTTGGCTGATTGGATTCCTGTTCGGCTACTTCCTGCACTTAAATCGTGGCAGGAAGTTCGAGTTGAGTCGTTTGGTTGTTTGGTCTGGTTGGCTCTTCAGTCTGGCCATGATCTTCACCTCGATCTTTGCCCTCTATCCATCTGGAAAGTGGAGTGCCCCCCCTCTGTCAACTGTGGAGGAATCTGTTTACTACACCTTCACTC	Size	Hit Count	Total Norm	Total
No Reads

dm3

---TGCCTGTTTGCCACCCAAATGGTCAATCATTACTCAATGAGTATTAAGTATGT---CCTTTTACCGC--TA---------------TGCA----------G--------------------T-CACTTT----ATTTA------------CGCCTGTTA---TT--TTGCAGAAATGGTGGTGGCG---ATGATGA----------AGCCAACTCAAAGCTGTACCTTGCCACGCACACACATGCAACTCCTTGGCTGATTGGATTCCTGTTCGGATACTTTCTGCACATGAATCGTGGCAGAAAGTTCCAGCTGAGCTGGCTGGTCCTGTGGTCTGGTTGGTTCATCAGCCTGGCGATGATCTTCACCTCGATCTTTGCAACCTATCCGTCTGCGAAGTGGAGTGCTCCTCCGCTATCTACCTTGGATGAATCTCTGTACTACACTCTCACTC	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
.........................................................................................................................................................................................................................................................................................................................................................TTCATCAGCCTGGCGATGATCTTC........................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................AATGAGTATTAAGTATGT---CCTTTTAC......................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................ACCTCGATCTTTGCAACCTATCCGTC..............................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................TTGGTTCATCAGCCTGGCGATGATC...........................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................GCTGGTCCTGTGGTCTGGAA..................................................................................................................	20	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droSim2

---TGTCTGTTTGCCACCCAAATGGTCAATCATTACTCAATGAGTATTAAGTATGT---CCTTGTACCTC--CA---------------TGCA----------G--------------------T-CACTTT----ACTTA------------CTCCTGTTA---TT--TTGCAGAAATGGTGGTGGCG---ATGATGA----------AGCCAACTCAAAGCTGTACCTTGCCACGCACACACATGCGGCTCCTTGGCTGATTGGATTTCTGTTCGGATACTTCCTGCACCTGAATCGTGGCAGAAAGTTCCAGATTAGCTGGCTGGTACTATGGTTGGGTTGGATCATCAGCTTGGCGATGTTCCTTACCTCGATCTTTGCAACCTATCCGTCTGCGAAGTGGAGTGCTCCTCCGCTCTCCACCTTGGAGGAATCTCTGTACTACACTCTCACTC

Size

Hit Count

Total Norm

Total

M023
Head

M024
Male-body

M025
Embryo

M053
Female-body

O001
Testis

O002
Head

SRR553485
Ovary

SRR553486
Ovary

SRR553487
Ovary

SRR553488
Ovary

SRR618934
Ovary

V044
Embryo

SRR902008
Ovary

SRR902009
Testis

SRR1275487
Male larvae

SRR1275485
Male prepupae

SRR1275483
Male prepupae

No Reads

droSec2

GCCTGTCTATTTGCCACCCTGATGGTCAATGGATATACAATGATGATCACGTAAGT---CATACTTTTTG--GT---------------------A------T-TAAGATCAAGTTCT-------------T----ACAT--------------AACCCTTT---CT--ATCCAGGACTGCCTCTC---------CAGA----------AGCCATGCGAGATGGGTACTATGCAACCCATACTCATGCTACACCCTGGCTGATAGGATTCCTCTTCGGATACTTCCTGCATCTGAACAGAGGGAAGAAGTTCCAGCTCAGCTGGGTAGCCGTGTGGTCAGGATGGATCCTCTGTCTGGCCATGATCTTCACATCGATCTTTGCCCTGTATCCGCCGTCCAAGTTGTCTGGACCTGACGCGTCCACCTTGGCGGAGTCTTTATACTACACTTTAACCA	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
.........................................................................................................................................................................................................................................................................................CTTCCTGCATCTGAACAGAGG...........................................................................................................................................................	21	1	1.00	1	0	1	0	0
...............................................................................................................................................................................................................................................................................................................................GCTGGGTAGCCGTGTGGTCAGGATGG................................................................................................................	26	1	1.00	1	0	0	1	0
.................................................................................................................................................................................................................................................................................................ATCTGAACAGAGGGAAGAAGTTCCA...............................................................................................................................................	25	1	1.00	1	0	1	0	0
................................................................................................................................................................................................................................GTACTATGCAACCCATACTC.....................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0

droYak3

---TGCCTGTTTGCCACCCAAATGGTCAATCATTACTCAATGAGTATTAAGTATGT---TCTTGCAACGC--CT---------------TGCT----------G--------------------T-CAACTT----ATTAA------------CCGCTGATA---TC--TTACAGAAATGGTGGTGGCG---ATGATGA----------GGCCAACTCAAAGTTGTACCTGGCCACGCACACACATGCGGCTCCTTGGCTGATTGGATTCCTGTTCGGATACTTCCTGCACCTGAATCGTGGCAGAAAGTTCCAGTTGAGTCGACTGGTCGTGTGGTCGGGTTGGCTCCTCAGCCTGGCCATGATCTTCACCTCGATTTTTGCACTTTATCCGTCTGCCAAGTGGAGTGCTCCTCCTCTTTCCACGCTGGAGGAATCTCTGTACTACACTCTCACTC

Size

Hit Count

Total Norm

Total

M026
Head

M043
Female-body

M056
Embryo

V046
Embryo

V052
Head

V058
Head

V120
Male-body

SRR1275488
Male larvae

SRR1275486
Male prepupae

SRR1275484
Male prepupae

GSM1528802
follicle cells

No Reads

droEre2

GGCTGTCTCTTTGCCACCATAATGGTCAACAAATACTCCTTGGTGCTCAAGTATGA---ACGACTACTCC--CA---------------TTTC----------G--------------------A-GAATTC----GTTTT-----TCATACCGTG-TATGT---TT--GTGTAGGAAGTTTTCAG---------CGGA----------TGCGCAAAAGGATCTGTATTATGCCACCCACACCCATGCTACGCCTTGGTTGATAGGATTCCTCTTCGGCTGCATTCTACACATGAACAGGGGAAAGAAGTTTCAGCTCAGCAGGATAGTCGTGTGGTCGGGATGGATCCTTTGCCTGGCCATGATCTTCACCTCGATCTTCGCCCTCTACCCGTACGCCAAGTGGTTTGGTCCAGAGCTGTCCACCTTTGCGGAGGCTTCCTACTACACTCTAACTC	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
...........................................................................................................................................................................................................................GATCTGTATTATGCCACCCACACCC.....................................................................................................................................................................................................................	25	1	2.00	2	0	2	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................GCTCAGCAGGATAGTCGTGTGGTC.......................................................................................................................	24	1	1.00	1	0	0	0	1	0	0	0
....................................................................................................................................................................................................................................................................................................................................................GATGGATCCTTTGCCTGGCC.................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................AAGAAGTTTCAGCTCAGCAGGAT...................................................................................................................................	23	1	1.00	1	0	0	0	1	0	0	0
.....................................................................................................................................................................................................................................................................ATAGGATTCCTCTTCGGCTGC...............................................................................................................................................................................	21	1	1.00	1	0	0	0	1	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................CTTCACCTCGATCTTCGCCCTCTACCC.................................................................	27	1	1.00	1	0	1	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................TGGATCCTTTGCCTGGCC.................................................................................................	18	1	1.00	1	0	1	0	0	0	0	0
..............................................................................................................................................................................................................................CTGTATTATGCCACCCACACCC.....................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0
....................................................................................................................................................................................................................................................................GATAGGATTCCTCTTCGGCTGCATT............................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0
......................................................................................................................................................................................................A----------TGCGCAAAAGGATCTGT.......................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	1	0	0	0
.......................................................................................................................................................................................................................................................................AGGATTCCTCTTCGGCTGCA..............................................................................................................................................................................	20	1	1.00	1	0	0	0	1	0	0	0
..................................................................................................................................................................................................................................................................................................................................................GGGATGGATCCTTTGCCTGGC..................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0
...........................................................................................................................................................................................................................................................................TTCCTCTTCGGCTGCATTCTACAC......................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................GTTTCAGCTCAGCAGGAT...................................................................................................................................	18	1	1.00	1	0	0	0	1	0	0	0
............................................................................................................................................................................................................................ATCTGTATTATGCCACCCACACCC.....................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	1	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................AGAGCTGTCCACCTTTGCGGA.......................	21	1	1.00	1	0	1	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................ATCCTTTGCCTGGCCATGATCTTCA.......................................................................................	25	1	1.00	1	0	1	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................CAGGGGAAAGAAGTTTCAGCTC...........................................................................................................................................	22	1	1.00	1	0	0	0	1	0	0	0
........................................................................................................................................................................................................................................................................GGATTCCTCTTCGGCTGCATTCTACAC......................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................CTTCGCCCTCTACCCGTACGCC..........................................................	22	1	1.00	1	0	1	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................GGTTTGGTCCAGAGCTGTC...................................	19	1	1.00	1	0	0	0	1	0	0	0
..............................................................................................................................................................................................................................................................................................................................................GGTCGGGATGGATCCTTTGCCTGGC..................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................CCTCTACCCGTACGCCAAGTGGT...................................................	23	1	1.00	1	0	0	0	1	0	0	0
........................................................................................................................................................................................................................AAGGATCTGTATTATGCCACCCACACCC.....................................................................................................................................................................................................................	28	1	1.00	1	0	1	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCCACCTTTGCGGAGGCT...................	20	1	1.00	1	1	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................AGCAGGATAGTCGTGTGGTCGGGATG.................................................................................................................	26	1	1.00	1	0	0	0	1	0	0	0
....................................................................................................................................................................................................................................................................GATAGGATTCCTCTTCGGCTGC...............................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0
.........................................................................................................................................................................................................................................................................GATTCCTCTTCGGCTGCA..............................................................................................................................................................................	18	1	1.00	1	0	0	0	1	0	0	0
..............................................................................................................................................................................................................................................................................................................AAAGAAGTTTCAGCTCAGCAGG.....................................................................................................................................	22	1	1.00	1	0	0	0	1	0	0	0
...................................................................................................................................................................................................................................................................................................................AGTTTCAGCTCAGCAGGATA..................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0
.........................................................................................................................................................................................................................................................................GATTCCTCTTCGGCTGCAT.............................................................................................................................................................................	19	1	1.00	1	0	0	0	1	0	0	0
..........................................................................................................................................................................................................................................................................ATTCCTCTTCGGCTGCATT............................................................................................................................................................................	19	1	1.00	1	0	0	0	1	0	0	0
.............................................................................................................................................................................................................................TCTGTATTATGCCACCCACACCC.....................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0
....................................................................................................................................................................................................................................................................GATAGGATTCCTCTTCGGC..................................................................................................................................................................................	19	1	1.00	1	0	0	0	1	0	0	0

-10.4	-9.8	-9.8	-9.4

dpe_489

scaffold_0:11772220-11772420 +

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads