ID:

dpe_487

 Coordinate:

scaffold_0:11668628-11668683 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-7.1 -7.0 -6.9 -6.9

Flybase annnotation

CDS [Dper\GL24536-cds]; exon [dper_GLEANR_6819:2]; exon [dper_GLEANR_6819:3]; CDS [Dper\GL24536-cds]; intron [Dper\GL24536-in]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------##################################################
GAAAGGGTTGGAGAAGCCGCGTTCCCTCGTCCTCGAGCCGCGTCGTGGGGGTACATGTACATGGGCAGACTCCATACGCCGCGCCACAATGGACGGATCCAACCAGCAACCATGGCCGGGAGTTCATATTCGACCAGGAGACGAGACGCGACAAGA
**************************************************...................((..........((((.....)).)).........))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 M021
embryo
 V111
male body
............................GTCCTCGAGCCGCGTCGTGGGG.......................................................................................................... 22 0 1 11.00 11 11 0 0
............................GTCCTCGAGCCGCGTCGTGGG........................................................................................................... 21 0 1 4.00 4 4 0 0
......................................................................................................................GGAGTTCATATTCGACCAGGAGACGA............ 26 0 1 3.00 3 3 0 0
............................GTCCTCGAGCCGCGTCGTGG............................................................................................................ 20 0 1 3.00 3 3 0 0
......................................................................................................................GGAGTTCATATTCGACCAGGAGA............... 23 0 1 3.00 3 3 0 0
............................GTCCTCGAGCCGCGTCGTGGGGG......................................................................................................... 23 0 1 2.00 2 2 0 0
...................................................................................CCACAATGGACGGATCCAACCAGC................................................. 24 0 3 2.00 6 6 0 0
.............................................................TGGGCAGACTCCATACGCCGCGCCAC..................................................................... 26 0 1 2.00 2 2 0 0
............................GTCCTCGAGCCGCGTCGTGGGGGT........................................................................................................ 24 0 1 2.00 2 2 0 0
...................................................................................CCACAATGGACGGATCCAACCAG.................................................. 23 0 3 1.33 4 4 0 0
...........................................................................................................................TCATATTCGACCAGGAGACGAGA.......... 23 0 5 1.20 6 6 0 0
....GGGTTGGAGAAGCCGCGTTC.................................................................................................................................... 20 0 1 1.00 1 1 0 0
............................................................ATGGGCAGACTCCATACGCCG........................................................................... 21 0 1 1.00 1 1 0 0
..........................TCGTCCTCAAGCCGCGTCGTGCG........................................................................................................... 23 2 1 1.00 1 1 0 0
.......................................................TGTACATGGGCAGACTCCATACG.............................................................................. 23 0 1 1.00 1 1 0 0
......................TCCCTCGTCCTCGAGCCGCGTCGTGG............................................................................................................ 26 0 1 1.00 1 1 0 0
......................................................................................................................GGAGTTCATATTCGACCAGGAGAC.............. 24 0 1 1.00 1 1 0 0
......................................................ATGTACATGGGCAGACTCCATACGC............................................................................. 25 0 1 1.00 1 1 0 0
.....................................................CATGTACATGGGCAGACTCC................................................................................... 20 0 1 1.00 1 1 0 0
..........................TCGTCCTCGAGCCGCGTCGTGT............................................................................................................ 22 1 1 1.00 1 1 0 0
......................TCCCTCGTCCTCGAGCCGCGT................................................................................................................. 21 0 1 1.00 1 1 0 0
...................................................TACATGTACATGGGCAGACT..................................................................................... 20 0 1 1.00 1 1 0 0
.........................................................TACATGGGGAGACTCCATACGCCG........................................................................... 24 1 1 1.00 1 1 0 0
......................TCCCTCGTCCTCGAGCCGCGTCGT.............................................................................................................. 24 0 1 1.00 1 1 0 0
............GATGCCGCGTTCCCTCGTCCTCGAGC...................................................................................................................... 26 1 1 1.00 1 1 0 0
.........................................................TACATGGGCAGACTCCATACGC............................................................................. 22 0 1 1.00 1 1 0 0
............................GTCCTCGATCCGCGTCGTGGGGG......................................................................................................... 23 1 1 1.00 1 1 0 0
......................................................................................................................GGAGTTCATATTCGACCAGGAGACGAT........... 27 1 1 1.00 1 0 1 0
..........................TCGTCCTCGAGCCGCGTCGTGGGGG......................................................................................................... 25 0 1 1.00 1 1 0 0
.............................................TGGGGGTACATGTACATGGGCAA........................................................................................ 23 1 1 1.00 1 1 0 0
...................................................................................CCACAATGGACGGATCCAACCA................................................... 22 0 3 0.67 2 2 0 0
........................................................................................ATGGACGGATCCAACCAGCAACCA............................................ 24 0 2 0.50 1 1 0 0
...................................................................................CCACAATGGACGGATCCAACCAGCAA............................................... 26 0 2 0.50 1 1 0 0
..................................................................................................CCAACCAGCAACCATGGCCGGGAG.................................. 24 0 2 0.50 1 1 0 0
.....................................................................................ACAATGGACGGATCCAACCAGCAACCA............................................ 27 0 2 0.50 1 1 0 0
.......................................................................................AATGGACGGATCCAACCAGCAAC.............................................. 23 0 2 0.50 1 1 0 0
......................................................................................CAATGGACGGATCCAACCAGCAACAA............................................ 26 1 2 0.50 1 1 0 0
.....................................................................................CCAATGGACGGATCCAACCAGCAAC.............................................. 25 1 2 0.50 1 1 0 0
.........................................................................................TGGACGGATCCAACCAGCAACCATGGCC....................................... 28 0 2 0.50 1 1 0 0
.............................................................................................CGGATCCAACCAGCAACCATGGCCG...................................... 25 0 2 0.50 1 1 0 0
.........................................................................................TGGACGGATCCAACCAGCAACCATGGC........................................ 27 0 2 0.50 1 1 0 0
............................GTCCTCGAGCCGTGTCGTGGGG.......................................................................................................... 22 1 2 0.50 1 1 0 0
.........................................................................................TGGACGGATCCAACCAGCAACCATG.......................................... 25 0 2 0.50 1 1 0 0
...........................................................................................GACGGATCCAACCAGCAACCATGGCCG...................................... 27 0 2 0.50 1 1 0 0
......................................................................................CAATGGACGGATCCAACCAGCAA............................................... 23 0 2 0.50 1 1 0 0
.........................................GTCGTGGGGGTTCAAGTCC................................................................................................ 19 3 13 0.38 5 5 0 0
......................................................................TCCATACGCCGCGCCACAATGGACG............................................................. 25 0 3 0.33 1 1 0 0
...................................................................................CCACAATGGACGGATCCAACCAGCA................................................ 25 0 3 0.33 1 1 0 0
....................................................................................CACAATGGACGGATCCAACCA................................................... 21 0 3 0.33 1 1 0 0
...................................................................................CCACAATGGACGGATCCAACC.................................................... 21 0 3 0.33 1 1 0 0
.................................................................................CGCCACAATGGACGGATCCAACCAGC................................................. 26 0 3 0.33 1 1 0 0
............................................................................................................................CATATTCGACCAGGAGACGAGAC......... 23 0 5 0.20 1 1 0 0
...........................................................................................................................TCATATTCGACCAGGAGACGAGACG........ 25 0 5 0.20 1 1 0 0
...........................................................................................................................TCATATTCGACCAGGAGACGAGAC......... 24 0 5 0.20 1 1 0 0
...........................................................................................................................TCATATTCGACCAGGAGACGAG........... 22 0 5 0.20 1 1 0 0
...........................................................................................................................TCATATTCGACCAGGAGACGAGACGC....... 26 0 5 0.20 1 1 0 0
...........................................................................................................................TCATATTCGACCAGGAGACGA............ 21 0 5 0.20 1 1 0 0
..................................................................................................................................CGACCAGGAGACGAGACGC....... 19 0 7 0.14 1 0 0 1
.........GGAGAAGCCGCGTTCCCTCG............................................................................................................................... 20 0 15 0.07 1 1 0 0
........TGGAGAAGCCGCGTTCCCTCGTC............................................................................................................................. 23 0 15 0.07 1 1 0 0
........TGGAGAAGCCGCGTTCCCTCGTCCT........................................................................................................................... 25 0 15 0.07 1 1 0 0
...................CGTTCCCTCGTCCTCGAGACGCGTCGT.............................................................................................................. 27 1 16 0.06 1 1 0 0

Anti-sense strand reads

CTTTCCCAACCTCTTCGGCGCAAGGGAGCAGGAGCTCGGCGCAGCACCCCCATGTACATGTACCCGTCTGAGGTATGCGGCGCGGTGTTACCTGCCTAGGTTGGTCGTTGGTACCGGCCCTCAAGTATAAGCTGGTCCTCTGCTCTGCGCTGTTCT
**************************************************...................((..........((((.....)).)).........))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 M021
embryo
 V111
male body		 V042
embryo
 V057
head
.......................................................................................................GTCGTTGGTACCGGCCCTCAAGTAT............................ 25 0 1 15.00 15 15 0 0 0 0
................GGCGCAAGGGAGCAGGAGCTCG...................................................................................................................... 22 0 1 6.00 6 4 1 0 1 0
.............................................................................................................GGTACCGGCCCTCAAGTATAAGCT....................... 24 0 1 5.00 5 5 0 0 0 0
.........................................................................................................CGTTGGTACCGGCCCTCAAGTAT............................ 23 0 1 5.00 5 2 3 0 0 0
...............CGGCGCAAGGGAGCAGGAGCTCG...................................................................................................................... 23 0 1 5.00 5 4 0 1 0 0
......................................................................................................GGTCGTTGGTACCGGCCCTCAAGTAT............................ 26 0 1 5.00 5 5 0 0 0 0
..............TCGGCGCAAGGGAGCAGGAGCTCG...................................................................................................................... 24 0 1 3.00 3 3 0 0 0 0
..........................................................................................................GTTGGTACCGGCCCTCAAGTAT............................ 22 0 1 2.00 2 2 0 0 0 0
....................................................................................................................................TGGTCCTCTGCTCTGCGCTGTTCT 24 0 1 1.00 1 1 0 0 0 0
.....................................................GTACATGTACCCGTCTGAGGTATG............................................................................... 24 0 1 1.00 1 1 0 0 0 0
.................................................CCATGTACATGTACCCGTCTGAGGTAT................................................................................ 27 0 1 1.00 1 1 0 0 0 0
........................................GCAGCACCCCCATGTACAT................................................................................................. 19 0 1 1.00 1 1 0 0 0 0
......................................................................................................GGTCGTTGGTACCGGCCGTCAAGTAT............................ 26 1 1 1.00 1 1 0 0 0 0
.....................................................................................................................................GGTCCTCTGCTCTGCGCTGTTC. 22 0 1 1.00 1 1 0 0 0 0
......................................GCGCAGCACCCCCATGTACATGT............................................................................................... 23 0 1 1.00 1 1 0 0 0 0
...................................TCGGCGCAGCACCCCCATGTACATGTAC............................................................................................. 28 0 1 1.00 1 1 0 0 0 0
...................................TCGGCGCAGCACCCCCATGTACATG................................................................................................ 25 0 1 1.00 1 1 0 0 0 0
.........................................................................................................TGTTGGTACCGGCCATCAAGTAT............................ 23 2 1 1.00 1 1 0 0 0 0
.......................................................................................................GTCGTTGGTACCGGCCCTCAAGTA............................. 24 0 1 1.00 1 1 0 0 0 0
....................................CGGCGCAGCACCCCCATGTACATGT............................................................................................... 25 0 1 1.00 1 1 0 0 0 0
............................................................................................................TGGTACCGGCCCTCAAGTATAAGCT....................... 25 0 1 1.00 1 1 0 0 0 0
..............................................................CCCGTCTGAGGTATGCGGCGCGG....................................................................... 23 0 1 1.00 1 1 0 0 0 0
......................................................................................................GGTCGTTGGTACCGGCCCTCAAGT.............................. 24 0 1 1.00 1 1 0 0 0 0
..............................GGAGCTCGGCGCAGCAACCCCATGT..................................................................................................... 25 1 1 1.00 1 1 0 0 0 0
.....................................GGCGCAGCACCCCCATGTACATGTA.............................................................................................. 25 0 1 1.00 1 1 0 0 0 0
.......................................................................................................GTCATTGGTACCGGCCGTCAAGTAT............................ 25 2 1 1.00 1 1 0 0 0 0
.............TTCGGCGCAAGGGAGCAGGAGCTCG...................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
..............TCGGCGCAAGCGAGCAGGAGCTCG...................................................................................................................... 24 1 1 1.00 1 1 0 0 0 0
...................GCAAGGGAGCAGGAGCTCGGCG................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
..................CGCAAGGGAGCGGGAGCTCG...................................................................................................................... 20 1 1 1.00 1 1 0 0 0 0
...............CGGCGCAAGGGAGCAGGAGCTC....................................................................................................................... 22 0 15 0.80 12 12 0 0 0 0
.....................................................................GAGGTATGCGGCGCGGTGTTACCT............................................................... 24 0 3 0.67 2 2 0 0 0 0
................GGCGCAAGGGAGCAGGAGCTC....................................................................................................................... 21 0 15 0.60 9 9 0 0 0 0
...................................................................................GGTGTTACCTGCCTAGGCTGGTCGTT............................................... 26 1 2 0.50 1 1 0 0 0 0
................................................................CGTCTGAGGTATGCGGCGCGGTGT.................................................................... 24 0 2 0.50 1 1 0 0 0 0
..............TCGGCGCAAGGGAGCAGGAGCTC....................................................................................................................... 23 0 15 0.40 6 6 0 0 0 0
..................................................................................TGGTGTTACCTGCCTAGGTTGGTCGT................................................ 26 1 3 0.33 1 1 0 0 0 0
.......................................................................GGTATGCGGCGCGGTGTTACC................................................................ 21 0 3 0.33 1 1 0 0 0 0
............................................................................GCGGCGCGGTGTTACCTGCCTAGGTT...................................................... 26 0 3 0.33 1 1 0 0 0 0
................................................................................CGCGGTGTTACCTGCCTAGGTT...................................................... 22 0 3 0.33 1 1 0 0 0 0
...................................................................CTGAGGTATGCGGCGCGGTGTTACCT............................................................... 26 0 3 0.33 1 1 0 0 0 0
.......................................................................GGTATGCGGCGCGGTGTTACCT............................................................... 22 0 3 0.33 1 1 0 0 0 0
........................................................................GTATGCGGCGCGGTGTTACCT............................................................... 21 0 3 0.33 1 1 0 0 0 0
.............................................................................CGGCGCGGTGTTACCTGCCTAGGTT...................................................... 25 0 3 0.33 1 1 0 0 0 0
................GGCGCAAGGGAGCAGGAGCT........................................................................................................................ 20 0 15 0.20 3 2 0 1 0 0
.............TTCGGCGCAAGGGAGCAGGAGC......................................................................................................................... 22 0 15 0.20 3 2 0 1 0 0
.............................................................................................................................TATAAGCTGGTCCTCTGCTCTG......... 22 0 7 0.14 1 1 0 0 0 0
.........CCTCTTCGGCGCAAGGGAGCAGG............................................................................................................................ 23 0 15 0.13 2 1 0 1 0 0
...........TCTTCGGCGCAAGGGAGCAGG............................................................................................................................ 21 0 15 0.13 2 1 0 1 0 0
..............TCGGCGCAAGGGAGCAGGAGCT........................................................................................................................ 22 0 15 0.13 2 2 0 0 0 0
.................GCGCAAGGGAGCAGGAGCTC....................................................................................................................... 20 0 15 0.13 2 2 0 0 0 0
..................................................................TCGGAGATAGGCGGCGCGGT...................................................................... 20 3 8 0.13 1 0 0 0 0 1
................................................................................................................................AAGCTGGTCCTCTGCTCTGC........ 20 0 8 0.13 1 1 0 0 0 0
...................GCAAGGGAGCAGGAGCTC....................................................................................................................... 18 0 16 0.13 2 2 0 0 0 0
......................................................................AGGTATGCGGCGCAGTGTGC.................................................................. 20 3 10 0.10 1 0 0 0 0 1
........................................................................................................................................CCAATGCTCTGCGCTGTTA. 19 3 13 0.08 1 0 0 0 1 0
................AGCGCAAGGGAGCAGGAGCT........................................................................................................................ 20 1 15 0.07 1 1 0 0 0 0
............CTTCGGCGCAAGGGAGCAGG............................................................................................................................ 20 0 15 0.07 1 0 0 1 0 0
...............CGGCGCAAGGGAGCAGGAGC......................................................................................................................... 20 0 15 0.07 1 1 0 0 0 0
.........CCTCTTCGGCGCAAGGGAGCAG............................................................................................................................. 22 0 15 0.07 1 1 0 0 0 0
...........TCTTCGGCGCAAGGGAGCAGGAG.......................................................................................................................... 23 0 15 0.07 1 1 0 0 0 0
..........CTCTTCGGCGCAAGGGAGCAGGAGC......................................................................................................................... 25 0 15 0.07 1 1 0 0 0 0
...........TCTTCGGCGCAAGGGAGCAGGAGC......................................................................................................................... 24 0 15 0.07 1 1 0 0 0 0
.............TTCGGCGCAAGGGAGCAGGAGCTC....................................................................................................................... 24 0 15 0.07 1 1 0 0 0 0
.............TTCGGCGCAAGGGAGCAGGA........................................................................................................................... 20 0 15 0.07 1 1 0 0 0 0
...............TGGCGCAAGGGAGCAGGAGCTC....................................................................................................................... 22 1 15 0.07 1 1 0 0 0 0
........ACCTCTTCGGCGCAAGGGAGCAGG............................................................................................................................ 24 0 15 0.07 1 1 0 0 0 0
..........CTCTTCGGCGCAAGGGAGCAGG............................................................................................................................ 22 0 15 0.07 1 1 0 0 0 0
.............TTCGGCGCAAGGGAGCAGGAGCT........................................................................................................................ 23 0 15 0.07 1 1 0 0 0 0
................GGCGCAAGGGAGCAGGAGCTCA...................................................................................................................... 22 1 15 0.07 1 1 0 0 0 0
..........CTCTTCGGCGCAAGGGAGCAGGAGCT........................................................................................................................ 26 0 15 0.07 1 0 1 0 0 0
...............CGGCGCAAGGGAGCAGGAGCT........................................................................................................................ 21 0 15 0.07 1 0 0 0 1 0
................GGCGCAAGGGAGCAGGAGC......................................................................................................................... 19 0 15 0.07 1 1 0 0 0 0
........ATCTCTTCGGCGCAAGGGAG................................................................................................................................ 20 1 15 0.07 1 1 0 0 0 0
.............TTCGGCGCAAGGGAGCAGGAGCTG....................................................................................................................... 24 1 15 0.07 1 1 0 0 0 0
............GTTCGGCGCAAGGGAGCAGGAGC......................................................................................................................... 23 1 15 0.07 1 1 0 0 0 0
.............ATCGGCGCAAGGGAGCAGGAGC......................................................................................................................... 22 1 16 0.06 1 1 0 0 0 0
...........TCTTCGGCGCAAGAGATTAG............................................................................................................................. 20 3 20 0.05 1 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_0:11668578-11668733 + dpe_487 GAAAGGGTTGGAGAAGCCGCGTTCCCTCGTCCTCGAGCCGCGTCGTGGGGGTACATGTACATG-----------GGCAGACTCCATACGCCGCGCCACAATGGACGGATCCAACCAGCA--------------------ACCATGGCCGGGAGTTCATATTCGACCAGGAGACGAGACGC------------------------------------------------------GACAAGA
dp5 2:17464465-17464613 - GAAAGGGTTGTAGTAGCCGCGTTCCCTGGACCTCGGGCCGCGTCGCGGGGGTACATGTACATGA-----------GCAGACTCCATACGCCGCGCCACAATGGACGGATCCAACCAGCA--------------------ACCATGGCCGGGAGTTTATATTCGACCAGGAGACGAGACGA-------------------------------------------------------------
droWil2 scf2_1100000004514:2829747-2829923 + GAAGGGAGTGGAGGAGCCGCGTTCGCTAGTCCTTGAACCGCGACGT--GGTTACATGTATTGGACAGAATCACCATCGGACTCTATACGAAGAGCCACCATGGATGGCAATGAGTTGCAGACAATCATAGCGGGAGCTAATCATGCGGCTGGTCTCACTTTTGACCAGGAAACAAGACG--------------------------------------------------------------
droVir3 scaffold_13324:2558173-2558349 - GAAAGGTGTGGAAGAGCCCCGTTCTCTTGTACTAGAACCTCGACGC--GGCTACATGTACTGGACCGAATCACCATCCGATTCTATTCGTCGCGCAACTATGGATGGTAACGAGCTGCAAACAATTATAGCGGGTGCTAATCATGCCGCTGGCTTGACCTTTGACCAGGGGACTAGACG--------------------------------------------------------------
droMoj3 scaffold_6496:26313421-26313597 + GAAGGGAGTGGAAGAGCCCCGTTCTCTTGTACTAGAGCCACGTCGT--GGCTATATGTACTGGACGGAATCTCCATCCGATTCTATTCGCCGCGCCACAATGGATGGCAATGAACTACAAACAATTATCGCAGCTGCTAATCACGCCGCGGGGTTGACTTTTGATCAGGACACTAGACG--------------------------------------------------------------
droGri2 scaffold_15112:4824269-4824445 + GAAAGGTGTGGAGGAGCCGCGTTCCCTTGTCCTGGAACCAGGACGT--GGTTACATGTACTGGACGGAATCACCGTCCGATTTGATACGACGCGCCACCATGGATGGCAATGACCTCCAAACAATTATTGCGGGTGCAAATCATGCGGCCGGTTTGACCTTTGACCAGGACACAAGGCG--------------------------------------------------------------
droAna3 scaffold_13266:16647162-16647400 - GAAGCTGGTGGAGGAGCCGCGATCTCTGGTCCTGGAACCGAAGCGG--GGATACATGTACTGGACAGAGTCTCCGACGGACTCTATTCGTCGCGCCGCCATGGATGGATCCGATTTGCAGACCATTGTGACGGGAGCCAATCATGCCGCAGGCCTGACATTCGACCAAGAGACCAGGCGCCTCTACTGGGCCACCCAATCCCGGCCCGCCAAGATCGAGTGCGCCGACTGGGATGGCAAGA
droBip1 scf7180000396384:755704-755942 - GAAGCTGGTGGAGGAGCCGCGGTCTCTGGTCCTGGAGCCGAAGCGG--GGGTACATGTATTGGACAGAGTCCCCCACCGACTCCATTCGTCGCGCCGCCATGGACGGATCCGACTTGCAGACCATCGTGACGGGAGCCAACCATGCCGCCGGCTTGACATTTGACCAGGAGACCCGGCGCCTCTACTGGGCCACCCAATCGCGGCCGGCGAAGATCGAGAGCGCCGACTGGGATGGCAAGA
droKik1 scf7180000302277:491350-491588 + GAAGGGAGTGGAGGAGCCGCGCTCCCTGGTTCTAGAGCCGCGTCGT--GGTTACATGTACTGGACAGAATCGCCCATGGACGTGATTCGACGAGCTGCGATGGATGGCACCGATATGCAAACCATTGTCTCAAATGCCAATCATGCCTCTGGCCTGACCTTTGACCAGGAGACGCGACGCCTCTACTGGGCCACCCAGTCGCGACCGGCAAAGATCGAAAGCGCCGACTGGGATGGTAAAA
droFic1 scf7180000454039:152681-152919 - GAAGGGAGTAGAGGAACCACGATCCCTCGTTTTGGAACCGAGAAGA--GGTTACATGTACTGGACGGAATCTCCGACGGATTCGATTCGACGAGCGGCGATGGATGGAACCGAATTGCAAACTATTGTAGCGGGTGCAAATCATGCGGCGGGACTTACTTTTGACCAGGAAACACGACGTCTCTACTGGGCCACTCAATCCCGGCCAGCGAAAATCGAAAGCGCCGATTGGGATGGCAAGA
droEle1 scf7180000491282:575603-575841 - GAAGGGAGTGGAGGAGCCACGTTCGCTGGTGTTGGAGCCGCGACGC--GGTTACATGTACTGGACGGAATCGCCAACGGATTCAATTCGCAGAGCGGCCATGGACGGCAGCGATCTGCAGACGATTGTGGCAGGTGCTAATCACGCCGCAGGGTTGACTTTCGACCAGGAGACCAGACGTTTGTACTGGGCCACCCAATCGCGGCCGGCTAAGATCGAAAGTGCCGATTGGGATGGCAAGA
droRho1 scf7180000759836:20347-20585 + GAAGGGAGTGGAGGAGCCACGTTCCCTGGTCTTGGAGCCGCGACGC--GGCTACATGTACTGGACGGAATCACCCTCGGACTCAATTCGCAGGGCGGCAATGGATGGTTCCGATTTGCAGACCATTGTAGCAGGTGCAAATCATGCCGCAGGGCTCACTTTCGACCAGGAGACAAGGCGTCTGTACTGGGCCACCCAATCCCGACCAGCTAAAATCGAAAGTGCTGATTGGGATGGCAAAA
droBia1 scf7180000302291:828929-829167 + GAAGGGAGTGGAGGAGCCGCGATCACTGGTGCTGGAGCCACGACGA--GGTTACATGTACTGGACGGAATCGCCGTCGGACTCGATCCGCCGAGCGGCCATGGATGGATCCGACTTGCAGACAATCGTAGCGGGGGCGAATAACGCCGCTGGACTAACCTTCGACCAGGAGACTAGGCGTCTGTACTGGGCCACCCAATCAAGACCGGCTAAAATCGAAAGCGCCGACTGGGATGGCAAGA
droTak1 scf7180000415379:516235-516473 - GAAGGGAGTCGAGGAGCCACGATCCCTGGTGCTGGAGCCGCGACGC--GGTTACATGTACTGGACGGAATCGCCGACGGACTCGATTCGCAGGGCGGCCATGGATGGAACCGAATTGCAGACAATCGTAGCGGGCGCTAATCATGCCGCCGGACTTACATTCGATCAGGAGGCGAGGCGTCTGTACTGGGCCACCCAATCCCGGCCAGCTAAAATCGAAAGCGCCGATTGGGACGGCAAGA
droEug1 scf7180000409758:383000-383238 + GAAGGGAGTGGAGGAGCCGCGATCCCTGGTTCTGGAACCACGACGT--GGTTATATGTACTGGACAGAATCGCCAACGGACTCGATTCGCAGAGCTGCAATGGACGGTTCTGACTTGCAGACTATTGTAGCGGGTGCCAATCACGCAGCTGAGCTTACCTTTGACCAGGAGACTCGTCGTCTGTACTGGGCCACCCAATCTCGCCCAGCCAAAATCGAAAGTGCCGATTGGGATGGTAAGA
dm3 chr2R:9344517-9344755 - GAAAGGAGTGGAGGAGCCACGTTCCTTGGTCCTAGAACCGCGACGA--GGCTATATGTACTGGACGGAATCGCCGACAGATTCGATTCGCAGAGCGGCAATGGACGGATCTGACTTGCAGACCATCGTAGCGGGTGCCAATCATGCCGCCGGACTAACCTTCGACCAGGAGACAAGACGTCTGTACTGGGCCACCCAATCGCGGCCAGCTAAAATCGAAAGTGCTGATTGGGATGGTAAGA
droSim2 2r:10007509-10007747 - GAAAGGAGTGGAGGAGCCACGTTCCTTGGTTCTAGAACCGCGACGA--GGCTATATGTACTGGACGGAATCACCGACAGATTCGATTCGCAGAGCGGCAATGGACGGATCTGACTTGCAGACCATCGTAGCGGGTGCCAATCATGCCGCCGGACTAACCTTCGACCAGGAGACAAGGCGTCTGTACTGGGCCACCCAATCGCGGCCAGCTAAAATCGAAAGTGCTGATTGGGATGGTAAGA
droSec2 scaffold_1:6863611-6863849 - GAAAGGAGTGGAGGAGCCACGTTCCTTGGTTCTAGAACCGCGAAGA--GGCTATATGTACTGGACGGAATCGCCAACAGATTCGATTCGCAGAGCGGCAATGGACGGGTCTGACTTGCAGACCATCGTAGCGGGTGCCAATCATGCCGCCGGACTAACCTTCGACCAGGAGACAAGACGTCTGTACTGGGCCACCCAATCGCGGCCAGCTAAAATCGAAAGTGCTGACTGGGATGGTAAGA
droYak3 2R:7612949-7613187 + GAAAGGTGTGGAGGAGCCACGTTCCCTGGTCCTGGAACCGCGACGC--GGTTACATGTACTGGACGGAATCGCCGACAGACTCAATTCGCAGAGCGGCCATGGACGGATCTGACTTGCAGACCATCGTAGCGGGTGCCAATCATGCCGCCGGCCTAACCTTCGACCAGGAGACAAGACGACTGTATTGGGCAACCCAATCGCGGCCAGCTAAAATCGAAAGTGCTGATTGGGATGGTAAGA
droEre2 scaffold_4845:16472222-16472460 + GAAAGGTGTGGAGGAGCCACGTTCCCTGGTCCTGGAACCGCGTCGC--GGATATATGTACTGGACGGAATCACCGACAGATTCAATTCGCAGAGCGGCCATGGACGGATCTGACTTGCAGACCATCGTAGCGGGTGCCAATCATGCCGCCGGACTAACTTTCGACCAGGAGACAAGACGTCTGTACTGGGCCACCCAATCGCGGCCAGCTAAAATCGAAAGTGCTGATTGGGATGGTAAGA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
GAAAGGGTTGGAGAAGCCGCGTTCCCTCGTCCTCGAGCCGCGTCGTGGGGGTACATGTACATG-----------GGCAGACTCCATACGCCGCGCCACAATGGACGGATCCAACCAGCA--------------------ACCATGGCCGGGAGTTCATATTCGACCAGGAGACGAGACGC------------------------------------------------------GACAAGASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
............................GTCCTCGAGCCGCGTCGTGGGG...............................................................................................................................................................................................22111.00110110000
............................GTCCTCGAGCCGCGTCGTGGG................................................................................................................................................................................................2114.004040000
.....................................................................................................................................................GGAGTTCATATTCGACCAGGAGACGA..................................................................2613.003030000
............................GTCCTCGAGCCGCGTCGTGG.................................................................................................................................................................................................2013.003030000
.....................................................................................................................................................GGAGTTCATATTCGACCAGGAGA.....................................................................2313.003030000
............................GTCCTCGAGCCGCGTCGTGGGGG..............................................................................................................................................................................................2312.002020000
..............................................................................................CCACAATGGACGGATCCAACCAGC...........................................................................................................................2432.006060000
.............................................................TG-----------GGCAGACTCCATACGCCGCGCCAC...............................................................................................................................................2612.002020000
............................GTCCTCGAGCCGCGTCGTGGGGGT.............................................................................................................................................................................................2412.002020000
..............................................................................................CCACAATGGACGGATCCAACCAG............................................................................................................................2331.334040000
..........................................................................................................................................................TCATATTCGACCAGGAGACGAGA................................................................2351.206060000
....GGGTTGGAGAAGCCGCGTTC.........................................................................................................................................................................................................................2011.001010000
............................................................ATG-----------GGCAGACTCCATACGCCG.....................................................................................................................................................2111.001010000
.......................................................TGTACATG-----------GGCAGACTCCATACG........................................................................................................................................................2311.001010000
......................TCCCTCGTCCTCGAGCCGCGTCGTGG.................................................................................................................................................................................................2611.001010000
.....................................................................................................................................................GGAGTTCATATTCGACCAGGAGAC....................................................................2411.001010000
......................................................ATGTACATG-----------GGCAGACTCCATACGC.......................................................................................................................................................2511.001010000
.....................................................CATGTACATG-----------GGCAGACTCC.............................................................................................................................................................2011.001010000
..........................TCGTCCTCGAGCCGCGTCGTGT.................................................................................................................................................................................................2211.001010000
......................TCCCTCGTCCTCGAGCCGCGT......................................................................................................................................................................................................2111.001010000
...................................................TACATGTACATG-----------GGCAGACT...............................................................................................................................................................2011.001010000
......................TCCCTCGTCCTCGAGCCGCGTCGT...................................................................................................................................................................................................2411.001010000
.........................................................TACATG-----------GGCAGACTCCATACGC.......................................................................................................................................................2211.001010000
.....................................................................................................................................................GGAGTTCATATTCGACCAGGAGACGAT.................................................................2711.001100000
..........................TCGTCCTCGAGCCGCGTCGTGGGGG..............................................................................................................................................................................................2511.001010000
.............................................TGGGGGTACATGTACATG-----------GGCAA..................................................................................................................................................................2311.001010000
..............................................................................................CCACAATGGACGGATCCAACCA.............................................................................................................................2230.672020000
...................................................................................................ATGGACGGATCCAACCAGCA--------------------ACCA..................................................................................................2420.501010000
..............................................................................................CCACAATGGACGGATCCAACCAGCA--------------------A.....................................................................................................2620.501010000
.............................................................................................................CCAACCAGCA--------------------ACCATGGCCGGGAG........................................................................................2420.501010000
................................................................................................ACAATGGACGGATCCAACCAGCA--------------------ACCA..................................................................................................2720.501010000
..................................................................................................AATGGACGGATCCAACCAGCA--------------------AC....................................................................................................2320.501010000
....................................................................................................TGGACGGATCCAACCAGCA--------------------ACCATGGCC.............................................................................................2820.501010000
........................................................................................................CGGATCCAACCAGCA--------------------ACCATGGCCG............................................................................................2520.501010000
....................................................................................................TGGACGGATCCAACCAGCA--------------------ACCATGGC..............................................................................................2720.501010000
....................................................................................................TGGACGGATCCAACCAGCA--------------------ACCATG................................................................................................2520.501010000
......................................................................................................GACGGATCCAACCAGCA--------------------ACCATGGCCG............................................................................................2720.501010000
.................................................................................................CAATGGACGGATCCAACCAGCA--------------------A.....................................................................................................2320.501010000
.................................................................................TCCATACGCCGCGCCACAATGGACG.......................................................................................................................................2530.331010000
..............................................................................................CCACAATGGACGGATCCAACCAGCA--------------------......................................................................................................2530.331010000
...............................................................................................CACAATGGACGGATCCAACCA.............................................................................................................................2130.331010000
..............................................................................................CCACAATGGACGGATCCAACC..............................................................................................................................2130.331010000
............................................................................................CGCCACAATGGACGGATCCAACCAGC...........................................................................................................................2630.331010000
...........................................................................................................................................................CATATTCGACCAGGAGACGAGAC...............................................................2350.201010000
..........................................................................................................................................................TCATATTCGACCAGGAGACGAGACG..............................................................2550.201010000
..........................................................................................................................................................TCATATTCGACCAGGAGACGAGAC...............................................................2450.201010000
..........................................................................................................................................................TCATATTCGACCAGGAGACGAG.................................................................2250.201010000
..........................................................................................................................................................TCATATTCGACCAGGAGACGAGACGC------------------------------------------------------.......2650.201010000
..........................................................................................................................................................TCATATTCGACCAGGAGACGA..................................................................2150.201010000
.................................................................................................................................................................CGACCAGGAGACGAGACGC------------------------------------------------------.......1970.141000001
.........GGAGAAGCCGCGTTCCCTCG....................................................................................................................................................................................................................20150.071010000
........TGGAGAAGCCGCGTTCCCTCGTC..................................................................................................................................................................................................................23150.071010000
........TGGAGAAGCCGCGTTCCCTCGTCCT................................................................................................................................................................................................................25150.071010000
dp5
GAAAGGGTTGTAGTAGCCGCGTTCCCTGGACCTCGGGCCGCGTCGCGGGGGTACATGTACATGA-----------GCAGACTCCATACGCCGCGCCACAATGGACGGATCCAACCAGCA--------------------ACCATGGCCGGGAGTTTATATTCGACCAGGAGACGAGACGA-------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................................................................................................................................................TTCGACCAGGAGACGAGACG..............................................................2080.6350000000050
..............................................................................................................................................................ATTCGACCAGGAGACGAGACG..............................................................2180.3830000000030
..............................................................................................................................................................ATTCGACCAGGAGACGAGA................................................................1980.3830000001020
..............................................................................................................................................................ATTCGACCAGGAGACGAGAC...............................................................2080.1310000000010
................................................................................................................................................................TCGACCAGGAGACGAGACG..............................................................1980.1310100000000
...............................................................................................................................................................TTCGACCAGGAGACGAGAC...............................................................1980.1310000000010
droWil2
GAAGGGAGTGGAGGAGCCGCGTTCGCTAGTCCTTGAACCGCGACGT--GGTTACATGTATTGGACAGAATCACCATCGGACTCTATACGAAGAGCCACCATGGATGGCAATGAGTTGCAGACAATCATAGCGGGAGCTAATCATGCGGCTGGTCTCACTTTTGACCAGGAAACAAGACG--------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..........................................................................................................................................AATCATGCGGCTGGTCTCA....................................................................................1911.00110000
..........................................................ATTGGACAGAATCACCATCGGACT...............................................................................................................................................................2411.00100010
.......................................................................................................................................GCTAATCATGCGGCTGGT........................................................................................1811.00100010
................................................................CAGAATCACCATCGGACT...............................................................................................................................................................1811.00110000
....................................................................................ATACGAAGAGCCACCATGGATGGCAATGA................................................................................................................................2911.00100100
..................................................TTACATGTATTGGACAGAATCACCATC....................................................................................................................................................................2711.00100010
...................................................................................TATACGAAGAGCCACCATGGATGGC.....................................................................................................................................2511.00100100
...................................................................AATCACCATCGGACTCTATACGAAGA....................................................................................................................................................2611.00110000
...................................................................................TATACGAAGAGCCACCATGGATGGCA....................................................................................................................................2611.00100100
..............................................................GACAGAATCACCATCGGACTC..............................................................................................................................................................2111.00100100
droVir3
GAAAGGTGTGGAAGAGCCCCGTTCTCTTGTACTAGAACCTCGACGC--GGCTACATGTACTGGACCGAATCACCATCCGATTCTATTCGTCGCGCAACTATGGATGGTAACGAGCTGCAAACAATTATAGCGGGTGCTAATCATGCCGCTGGCTTGACCTTTGACCAGGGGACTAGACG--------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
................................................................................................................................................GCCGCTGGCTTGACCTTTGAC............................................................................2112.002000000000000000000000000000000000000000000000000000000000000002
..................................................................................................TATGGATGGTAACGAGCTGCA..........................................................................................................................2111.001000000000000000000000000001000000000000000000000000000000000000
...........................................................................................................TAACGAGCTGCAAACAAT....................................................................................................................1811.001000000000000010000000000000000000000000000000000000000000000000
...................................................................................................ATGGATGGTAACGAGCTGC...........................................................................................................................1911.001000000000000010000000000000000000000000000000000000000000000000
...................................................................................................ATGGATGGTAACGAGCTGCA..........................................................................................................................2011.001000000000000010000000000000000000000000000000000000000000000000
..................................................................................CTATTCGTCGCGCAACTATGG..........................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
................................................................................TTCTATTCGTCGCGCAACTATGGA.........................................................................................................................................2411.001000000000000000000000001000000000000000000000000000000000000000
....................................ACCTCGACGC--GGCTACATGTT......................................................................................................................................................................................2111.001000000000000000000000000000000000001000000000000000000000000000
droMoj3
GAAGGGAGTGGAAGAGCCCCGTTCTCTTGTACTAGAGCCACGTCGT--GGCTATATGTACTGGACGGAATCTCCATCCGATTCTATTCGCCGCGCCACAATGGATGGCAATGAACTACAAACAATTATCGCAGCTGCTAATCACGCCGCGGGGTTGACTTTTGATCAGGACACTAGACG--------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
............................GTACTAGAGCCACGTCGT--GGCTA............................................................................................................................................................................................2311.001000001
......................................................................................................................................TGCTAATCACGCCGCGGGGT.......................................................................................2011.001100000
......................................................................................................................AAACAATTATCGCAGCTGC........................................................................................................1911.001001000
....................................................ATATGTACTGGACGGAATCTC........................................................................................................................................................................2111.001000001
droGri2
GAAAGGTGTGGAGGAGCCGCGTTCCCTTGTCCTGGAACCAGGACGT--GGTTACATGTACTGGACGGAATCACCGTCCGATTTGATACGACGCGCCACCATGGATGGCAATGACCTCCAAACAATTATTGCGGGTGCAAATCATGCGGCCGGTTTGACCTTTGACCAGGACACAAGGCG--------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droAna3
GAAGCTGGTGGAGGAGCCGCGATCTCTGGTCCTGGAACCGAAGCGG--GGATACATGTACTGGACAGAGTCTCCGACGGACTCTATTCGTCGCGCCGCCATGGATGGATCCGATTTGCAGACCATTGTGACGGGAGCCAATCATGCCGCAGGCCTGACATTCGACCAAGAGACCAGGCGCCTCTACTGGGCCACCCAATCCCGGCCCGCCAAGATCGAGTGCGCCGACTGGGATGGCAAGASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...........................GGTCCTGGAACCGAAGCGG--GG...............................................................................................................................................................................................2111.001100000
...............................................................................................................................................................................................................GCCAAGATCGAGTGCGCCGACTGGG.........2511.001000010
....................................................................................................................................................................................................................GATCGAGTGCGCCGACTGGGAC.......2211.001010000
..................................................................................................CATGGATGGATCCGATTTGC...........................................................................................................................2011.001010000
............................................GG--GGATACATGTACTGGAC................................................................................................................................................................................1911.001100000
.....................................................................................................................................................................................................ATCCCGGCCCGCCAAGATCGAGTGCG..................2611.001100000
...........................................CGG--GGATACATGTACTGGACAGA.............................................................................................................................................................................2311.001100000
............................GTCCTGGAACCGAAGCGG--G................................................................................................................................................................................................1911.001001000
.................................................GATACATGTACTGGACAGA.............................................................................................................................................................................1911.001100000
droBip1
GAAGCTGGTGGAGGAGCCGCGGTCTCTGGTCCTGGAGCCGAAGCGG--GGGTACATGTATTGGACAGAGTCCCCCACCGACTCCATTCGTCGCGCCGCCATGGACGGATCCGACTTGCAGACCATCGTGACGGGAGCCAACCATGCCGCCGGCTTGACATTTGACCAGGAGACCCGGCGCCTCTACTGGGCCACCCAATCGCGGCCGGCGAAGATCGAGAGCGCCGACTGGGATGGCAAGASizeHit CountTotal NormTotal
No Reads
droKik1
GAAGGGAGTGGAGGAGCCGCGCTCCCTGGTTCTAGAGCCGCGTCGT--GGTTACATGTACTGGACAGAATCGCCCATGGACGTGATTCGACGAGCTGCGATGGATGGCACCGATATGCAAACCATTGTCTCAAATGCCAATCATGCCTCTGGCCTGACCTTTGACCAGGAGACGCGACGCCTCTACTGGGCCACCCAGTCGCGACCGGCAAAGATCGAAAGCGCCGACTGGGATGGTAAAASizeHit CountTotal NormTotal
No Reads
droFic1
GAAGGGAGTAGAGGAACCACGATCCCTCGTTTTGGAACCGAGAAGA--GGTTACATGTACTGGACGGAATCTCCGACGGATTCGATTCGACGAGCGGCGATGGATGGAACCGAATTGCAAACTATTGTAGCGGGTGCAAATCATGCGGCGGGACTTACTTTTGACCAGGAAACACGACGTCTCTACTGGGCCACTCAATCCCGGCCAGCGAAAATCGAAAGCGCCGATTGGGATGGCAAGASizeHit CountTotal NormTotal
No Reads
droEle1
GAAGGGAGTGGAGGAGCCACGTTCGCTGGTGTTGGAGCCGCGACGC--GGTTACATGTACTGGACGGAATCGCCAACGGATTCAATTCGCAGAGCGGCCATGGACGGCAGCGATCTGCAGACGATTGTGGCAGGTGCTAATCACGCCGCAGGGTTGACTTTCGACCAGGAGACCAGACGTTTGTACTGGGCCACCCAATCGCGGCCGGCTAAGATCGAAAGTGCCGATTGGGATGGCAAGASizeHit CountTotal NormTotal
No Reads
droRho1
GAAGGGAGTGGAGGAGCCACGTTCCCTGGTCTTGGAGCCGCGACGC--GGCTACATGTACTGGACGGAATCACCCTCGGACTCAATTCGCAGGGCGGCAATGGATGGTTCCGATTTGCAGACCATTGTAGCAGGTGCAAATCATGCCGCAGGGCTCACTTTCGACCAGGAGACAAGGCGTCTGTACTGGGCCACCCAATCCCGACCAGCTAAAATCGAAAGTGCTGATTGGGATGGCAAAASizeHit CountTotal NormTotal
No Reads
droBia1
GAAGGGAGTGGAGGAGCCGCGATCACTGGTGCTGGAGCCACGACGA--GGTTACATGTACTGGACGGAATCGCCGTCGGACTCGATCCGCCGAGCGGCCATGGATGGATCCGACTTGCAGACAATCGTAGCGGGGGCGAATAACGCCGCTGGACTAACCTTCGACCAGGAGACTAGGCGTCTGTACTGGGCCACCCAATCAAGACCGGCTAAAATCGAAAGCGCCGACTGGGATGGCAAGASizeHit CountTotal NormTotal
No Reads
droTak1
GAAGGGAGTCGAGGAGCCACGATCCCTGGTGCTGGAGCCGCGACGC--GGTTACATGTACTGGACGGAATCGCCGACGGACTCGATTCGCAGGGCGGCCATGGATGGAACCGAATTGCAGACAATCGTAGCGGGCGCTAATCATGCCGCCGGACTTACATTCGATCAGGAGGCGAGGCGTCTGTACTGGGCCACCCAATCCCGGCCAGCTAAAATCGAAAGCGCCGATTGGGACGGCAAGASizeHit CountTotal NormTotal
No Reads
droEug1
GAAGGGAGTGGAGGAGCCGCGATCCCTGGTTCTGGAACCACGACGT--GGTTATATGTACTGGACAGAATCGCCAACGGACTCGATTCGCAGAGCTGCAATGGACGGTTCTGACTTGCAGACTATTGTAGCGGGTGCCAATCACGCAGCTGAGCTTACCTTTGACCAGGAGACTCGTCGTCTGTACTGGGCCACCCAATCTCGCCCAGCCAAAATCGAAAGTGCCGATTGGGATGGTAAGASizeHit CountTotal NormTotal
No Reads
dm3
GAAAGGAGTGGAGGAGCCACGTTCCTTGGTCCTAGAACCGCGACGA--GGCTATATGTACTGGACGGAATCGCCGACAGATTCGATTCGCAGAGCGGCAATGGACGGATCTGACTTGCAGACCATCGTAGCGGGTGCCAATCATGCCGCCGGACTAACCTTCGACCAGGAGACAAGACGTCTGTACTGGGCCACCCAATCGCGGCCAGCTAAAATCGAAAGTGCTGATTGGGATGGTAAGASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.......................................................................................................................................................................GGAGACAAGACGTCTGTACTGGGC..................................................2418.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................GCCAGCTAAAATCGAAAGTGC.................2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................TGGACGGATCTGACTTGCAGACC......................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................AATGGACGGATCTGACTTGC...........................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................TTCGCAGAGCGGCAATGGACGGATCTGAC...............................................................................................................................2913.0030000000000000000000000000000000000000000000000000000000000000000000000000000001110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................CCGGACTAACCTTCGACCAGGAGACA...................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................AATGGACGGATCTGACTTGCAGAC.......................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................ATCGCCGACAGATTCGATTCGCAGAG...................................................................................................................................................2612.0020000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TTGGTCCTAGAACCGCGACGA--GGCTA............................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
................................................................................................GCAATGGACGGATCTGACTTG............................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................ACCCAATCGCGGCCAGCTAAC............................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................AAAGTGCTGATTGGGATGGT....2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..............................................................................................................................................................................AGACGTCTGTACTGGGCCACCC.............................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................CGACAGATTCGATTCGCAGAGCGGCA..............................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TTGGTCCTAGAACCGCGACGA--GGC..............................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................CCCAATCGCGGCCAGCTAAAATCGA.......................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................GACAAGACGTCTGTACTGGGC..................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
......................................................................................TCGCAGAGCGGCAATGGACGGATCT..................................................................................................................................2511.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TCCTTGGTCCTAGAACCGCGACGA--GGC..............................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................CGAAAGTGCTGATTGGGATGG.....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................GACGGAATCGCCGACAGATTCGATTCGCA......................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................CCAATCGCGGCCAGCTAAAAT..........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
..AAGGAGTGGAGGAGCCACG............................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..............................................................................................................................................................................AGACGTCTGTACTGGGCCACCCAAT..........................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................AAAGTGCTGATTGGGATGGTAA..2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
................................................GGCTATATGTACTGGACG...............................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................CATCGTAGCGGGTGCCAATCATG................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................AGCTAAAATCGAAAGTGCTGATTG...........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................TCGACCAGGAGACAAGACGTCTGT.........................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................GCAGACCATCGTAGCGGGTGCC.......................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...............................................................................................................................................................................................CACCCAATCGCGGCCAGCTAAAATCG........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................................................................................GGACGGATCTGACTTGCA..........................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................CTGATTGGGATGGTAAGA1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
..........................................................................GACAGATTCGATTCGCAGAGCGGC...............................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................TGACTTGCAGACCATCGTAGCGGGTG.........................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......................................................................................................................................................................................GTACTGGGCCACCCAATCG........................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................TGCCAATCATGCCGCCGGACTAACCT.................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................GGACGGATCTGACTTGCAGAC.......................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.......................................................................................................................................................................................................................CGAAAGTGCTGATTGGGATG......2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
........................................................................................GCAGAGCGGCAATGGACGGATCTG.................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
......................................CGCGACGA--GGCTATATGTACTGGACGG..............................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................TCGCAGAGCGGCAATGGACGGATCTGAC...............................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................GAAAGTGCTGATTGGGATGGT....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................................................................................................................................................................................................AATCGAAAGTGCTGATTGGGATGG.....2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
....................................................................................................................................................................................................AATCGCGGCCAGCTAAAATCGAAAGT...................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................ACCATCGTAGCGGGTGCCA......................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................GCCGGACTAACCTTCGACCAGGAGA.....................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................CGCCGACAGATTCGATTCGCAGAGC..................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................................TAAAATCGAAAGTGCTGATTGGGATGG.....2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................ACCATCGTAGCGGGTGCCAATCATGCC..............................................................................................2711.0010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CGTTCCTTGGTCCTAGAACCG.........................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................CGCAGAGCGGCAATGGACGT......................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.....................................................................................................................................................................CAGGAGACAAGACGTCTGTACTGGGC..................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
............................................................................................................................................................................CAAGACGTCTGTACTGGGC..................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................TGCAGACCATCGTAGCGGGTGCCAA.....................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................GCCGACAGATTCGATTCGCAGAGCGG................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..............................................................................GATTCGATTCGCAGAGCGGC...............................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................AAGTGCTGATTGGGATG......1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................ATCTGACTTGCAGACCATCGTAGCGGG...........................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................ATATGTACTGGACGGAATCGCC.......................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................ACGTCTGTACTGGGCCACCC.............................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................CTATATGTACTGGACGGAATCGCATC.....................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................TATGTACTGGACGGAATCGCC.......................................................................................................................................................................2111.0010000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................GAGCGGCAATGGACGGATC...................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................ACGGATCTGACTTGCAGACC......................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................GACAAGACGTCTGTACTGGGCCACCC.............................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................................................TCGCAGAGCGGCAATGGACGGAT....................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
......................................................ATGTACTGGACGGAATCGCCGAC....................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
GAAAGGAGTGGAGGAGCCACGTTCCTTGGTTCTAGAACCGCGACGA--GGCTATATGTACTGGACGGAATCACCGACAGATTCGATTCGCAGAGCGGCAATGGACGGATCTGACTTGCAGACCATCGTAGCGGGTGCCAATCATGCCGCCGGACTAACCTTCGACCAGGAGACAAGGCGTCTGTACTGGGCCACCCAATCGCGGCCAGCTAAAATCGAAAGTGCTGATTGGGATGGTAAGASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.................................................................................................................................................................................CGTCTGTACTGGGCCACCCAA...........................................2111.00110000000000000000
.......................................................................................................ACGGATCTGACTTGCAGACC......................................................................................................................2011.00110000000000000000
.........................................................................................................................................................................AGACAAGGCGTCTGTACTGGGCCACCCA............................................2811.00101000000000000000
.....................................................................................................................................................................................................................ATCGAAAGTGCTGATTGGGAT.......2111.00100100000000000000
..................................................CTATATGTACTGGACGGAAT...........................................................................................................................................................................2011.00100100000000000000
.....................................................................................................GGACGGATCTGACTTGCA..........................................................................................................................1811.00101000000000000000
................................................GGCTATATGTACTGGACGGA.............................................................................................................................................................................2011.00100100000000000000
.............................................A--GGCTATATGTACTGGACGGA.............................................................................................................................................................................2111.00100000000000001000
......................................................................................TCGCAGAGCGGCAATGGAC........................................................................................................................................1911.00110000000000000000
....................................................ATATGTACTGGACGGAAT...........................................................................................................................................................................1811.00101000000000000000
........................................................................................................CGGATCTGACTTGCAGACC......................................................................................................................1911.00100100000000000000
.............................................................................................................................................CATGCCGCCGGACTAACCTTCGACCA..........................................................................2611.00100100000000000000
......................................................................................................................................TGCCAATCATGCCGCCGGA........................................................................................1911.00100100000000000000
droSec2
GAAAGGAGTGGAGGAGCCACGTTCCTTGGTTCTAGAACCGCGAAGA--GGCTATATGTACTGGACGGAATCGCCAACAGATTCGATTCGCAGAGCGGCAATGGACGGGTCTGACTTGCAGACCATCGTAGCGGGTGCCAATCATGCCGCCGGACTAACCTTCGACCAGGAGACAAGACGTCTGTACTGGGCCACCCAATCGCGGCCAGCTAAAATCGAAAGTGCTGACTGGGATGGTAAGASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................................................................................................GACTTGCAGACCATCGTAGCGGGTGCC.......................................................................................................2711.0010100
...................................................................................GATTCGCAGAGCGGCAATGGACGG......................................................................................................................................2411.0011000
......................................................................CGCCAACAGATTCGATTCG........................................................................................................................................................1911.0010010
.................................................................................TCGATTCGCAGAGCGGCAAT............................................................................................................................................2011.0010010
..........................................................................................................................CATCGTAGCGGGTGCCAATCATGCC..............................................................................................2511.0010010
.......................................................................................................................................................................................................CGCGGCCAGCTAAAATCG........................1811.0010010
.......................................................................................CGCAGAGCGGCAATGGACGGGT....................................................................................................................................2211.0010010
droYak3
GAAAGGTGTGGAGGAGCCACGTTCCCTGGTCCTGGAACCGCGACGC--GGTTACATGTACTGGACGGAATCGCCGACAGACTCAATTCGCAGAGCGGCCATGGACGGATCTGACTTGCAGACCATCGTAGCGGGTGCCAATCATGCCGCCGGCCTAACCTTCGACCAGGAGACAAGACGACTGTATTGGGCAACCCAATCGCGGCCAGCTAAAATCGAAAGTGCTGATTGGGATGGTAAGASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................................................................................................................................................CTAACCTTCGACCAGGAGACAAGACGACT...........................................................2912.00200000020000
......TGTGGAGGAGCCACGTTCCCT......................................................................................................................................................................................................................2111.00101000000000
.......................................................TGTACTGGACGGAATCGCCGA.....................................................................................................................................................................2111.00100000010000
.................................................................................................................................................................CGACCAGGAGACAAGACGACTGT.........................................................2311.00100000010000
................................................................................................................................................................................................................CTAAAATCGAAAGTGCTGATTGGG.........2411.00100000010000
............................................................................................................................................................................CAAGACGACTGTATTGGGCAACCCAAT..........................................2711.00101000000000
.................................................................................................................................................................................................................TAAAATCGAAAGTGCTGATTGGGATG......2611.00100000010000
..............................................................................................................................................................CTTCGACCAGGAGACAAGACGACTG..........................................................2511.00101000000000
..............................................................................GACTCAATTCGCAGAGCGGCCATGGAC........................................................................................................................................2711.00101000000000
.............................................................................................................................................................................AAGACGACTGTATTGGGCA.................................................1911.00100000010000
...................................................TACATGTACTGGACGGAATCGCCGA.....................................................................................................................................................................2511.00100000010000
......................................................................................................GACGGATCTGACTTGCAGA........................................................................................................................1911.00100000100000
.......................................................................................................................................................................................................................CGAAAGTGCTGATTGGGATG......2011.00100000010000
..........................................................................GACAGACTCAATTCGCAGAGC..................................................................................................................................................2111.00101000000000
..........................................................................................................................................................................................................................AAGTGCTGATTGGGATGGTAAGA2311.00100000010000
.......................................................................................................................................................................................................................CGAAAGTGCTGATTGGGAT.......1911.00100000010000
droEre2
GAAAGGTGTGGAGGAGCCACGTTCCCTGGTCCTGGAACCGCGTCGC--GGATATATGTACTGGACGGAATCACCGACAGATTCAATTCGCAGAGCGGCCATGGACGGATCTGACTTGCAGACCATCGTAGCGGGTGCCAATCATGCCGCCGGACTAACTTTCGACCAGGAGACAAGACGTCTGTACTGGGCCACCCAATCGCGGCCAGCTAAAATCGAAAGTGCTGATTGGGATGGTAAGASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
......................................................................................................................................................................................................TCGCGGCCAGCTAAAATCGAA......................2111.0010000010
.................................................GATATATGTACTGGACGGAATCACCGA.....................................................................................................................................................................2711.0010000100
....................................................ATATGTACTGGACGGAATCACCGA.....................................................................................................................................................................2411.0010000100
..........................................................ACTGGACGGAATCACCGACA...................................................................................................................................................................2011.0010000100
..............................................................................GATTCAATTCGCAGAGCGGCCATGGAC........................................................................................................................................2711.0010000100
..............................................................................GATTCAATTCGCAGAGCGGCCATG...........................................................................................................................................2411.0010000100
........................................................................................................................................................ACTAACTTTCGACCAGGAG......................................................................1911.0010000010
.AAAGGTGTGGAGGAGCCACGT...........................................................................................................................................................................................................................2111.0010000100
........................................CGTCGC--GGATATATGTACT....................................................................................................................................................................................1911.0010000010
....................................................ATATGTACTGGACGGAATCA.........................................................................................................................................................................2011.0010000010
.......................................................................................................................GACCATCGTAGCGGGTGCC.......................................................................................................1911.0010000010
....................................................................................ATTCGCAGAGCGGCCATGGACGGATCT..................................................................................................................................2711.0010000100
.............................................................................................................CTGACTTGCAGACCATCGTAGC..............................................................................................................2211.0010001000

Generated: 06/08/2015 at 02:43 PM