ID:

dpe_463

 Coordinate:

scaffold_0:10354207-10354357 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

CDS [Dper\GL23085-cds]; exon [dper_GLEANR_5444:2]; intron [Dper\GL23085-in]

Repeatable elements

NameClassFamilyStrand
(TTG)nSimple_repeatSimple_repeat+

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GTGGCGCGGCAGGAAGGTCTACAACAGAAACAACAACGACTAATGAAAATACAATAACAACAACAACAACGACAGGAAACACAATAGCAATAGCAACAACAACAACAACAACAATAGCATTAGAAACGAACAAAACAACAATAGAAAGACTTAGTAGTAGCAACAACTTAAGCAGTTTAACACCAACAACAACACCAACAGGAAAAGGAGAAGGAAACACACCAACAACGCCAACAACGACACCAACAATC
**************************************************....................................................................................................................((...............................))************************************************** 		Read size # Mismatch Hit Count Total Norm Total V042
embryo
 M042
female body
..................CTACAACAGAAACAACAACG..................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0
...............................................................................................................................................................................................ACACCAACAGGACAGGTAGA........................................ 20 3 9 0.11 1 0 1

Anti-sense strand reads

CACCGCGCCGTCCTTCCAGATGTTGTCTTTGTTGTTGCTGATTACTTTTATGTTATTGTTGTTGTTGTTGCTGTCCTTTGTGTTATCGTTATCGTTGTTGTTGTTGTTGTTGTTATCGTAATCTTTGCTTGTTTTGTTGTTATCTTTCTGAATCATCATCGTTGTTGAATTCGTCAAATTGTGGTTGTTGTTGTGGTTGTCCTTTTCCTCTTCCTTTGTGTGGTTGTTGCGGTTGTTGCTGTGGTTGTTAG
**************************************************....................................................................................................................((...............................))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 V057
head
 V111
male body
...............................................................................................................................................................................................TGTGGTTGTCCTGTCCATCT........................................ 20 3 9 1.33 12 10 0 2
............................................CTTGTATGTTACTGTTGTTGTTCTT...................................................................................................................................................................................... 25 3 1 1.00 1 1 0 0
......................................................................................................GTTGTTTTTGTGATCGCAATCT............................................................................................................................... 22 3 3 0.33 1 0 1 0
.................................................................................................................................................................................................TGGTTGTCCTGTTCATCTACC..................................... 21 3 6 0.17 1 1 0 0
.................................................................................................................................................................................................TGGTTGTCCTTTCCATCTAC...................................... 20 3 7 0.14 1 1 0 0
.................................................................................................................................................................................................TGGTTGTCCTGTCCATCTT....................................... 19 3 20 0.05 1 1 0 0
.................................................................TGCTGTTGTCCTTAGTGTTA...................................................................................................................................................................... 20 3 20 0.05 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_0:10354157-10354407 - dpe_463 GTGGCGCGGCAGGAAG---GTCTACAAC------------------AGA------------A------ACAACAA------CGACTAATGAAA------------------ATAC-------AATAACAA---CAACAACAA---------------------------------------CGACAGGAAAC---------A------------CAATAGCAATAGCAACAACAACAACA------------ACAACAAT-------AGCATTA------GAAA-CGAACAAA-----------------------------------------A---------CAACAA------------------------TAGAAA---------------GACTTAGTAGTAGCAACAACT------------TAA-GCAGT-------------TTAAC-ACCAACAACAACACCAACAGGAAAAG---------GAGA---AGGAA---A--------------------------------------------CACACC------AACAACGCCAACAACGACACCAA---CAATC
dp5 2:10127008-10127267 + dps_453 GTGGCGCGGCAGGAAG---GTCTACAAC------------------AGA------------A------ACAACAA------CGACTAATGAAA------------------ATAC-------AATAACAA---CAACAACAA---------------------------------------CAACAGGAAAC---------A------------CAATAGCAATAGCAACAACAACAACA------------ACAACAAT-------AGCATTA------GAAA-CGAACAAA-----------------------------------------A---------CAACAT------------------------TAGAAA---------------GACTTAGTAGTAGCAACAACT------------TAA-GCAGT-------------TTAAC-ACCAACAACAACACCAACAGGAAGAGGAGAAGGACCAAC---ACCAA---C--------------------------------------------AACGCC------AACAATGCCAACAACAACACCAA---CAATC
droWil2 scf2_1100000004515:3347658-3347900 + GTTGTACAACAACAAC---AACAACAAC------------------AAC------------A------ACAACAA------C------------------AACAACAACAACAAC-------AACAACAA---CAACAACAA---------------------------------------CAACAACAACA---------ACAA------------CAACAACAACAACAACAACAACA------------ACAACAAC---AACA-AC---A---ACAA----CAACAACA-----------------------------------------A------CAA---C------------------------AACAACAA-CAA---------------------CAACAACAACA------------ACA-ACAACAACAACAACAA----------CAACA------ACAACAACAACAA---------CAAC---AACAA---C--------------------------------------------AACAAC------AACAACAACAACAACAACAACAACAACAA--
droVir3 scaffold_13042:4678648-4678889 - CTGGCTGTCTGGCAAT---GCCGTCAAC------------------AACAACAGCAACAACAACA---ACAACAG------C------------------AACAACAACA-------------------A---CAGCAACAA------------------------------------------CAACAACA---------ACAA------------CAGCAACAGCAACAACAACAACA------------GCAACAACAACAACA-GC---A---ACAA-------CAACA-----------------------------------------A------CAG---C------------------------AACAACAA-CAA---------------------CAGCAACAACA------------ACA-ACAGCAACAACAACAA----------CAGCA------ACAACAACAACAG---------CAAC---AACAA---C--------------------------------------------AACAGC------AACAACAACAACAACAACAACAA---CAGCA
droMoj3 scaffold_6473:7805935-7806147 - GCA-----ACAG------------C---AACAGCAACAGC------AGC------------A------ACAACAA------C------------------AACAACAGTAACAAC-------AACAACAG---CAACGACAG---------------------------------------CAA------------------------------C---------------A-----------------------------------------------------ACAATCACAATAGCAACAACAACAACAACAACAACAG-----C---------------------------------------AG-------------CAG---------------------CAGCAGCAACA---------TTAACAA-C---AGCAACAACATTCACAAC----ATTA------ACAATAACAGCAG---------CAGCAACATTAA---T--------------------------------------------AACAGC------AACAACAACAACAACAACAACAA---CTGTC
droGri2 scaffold_15203:1310498-1310749 - GCA-----GCAGGAGC---------------AGCTACAGCAACAACAGC------------A------ACAACAA------C------------------------AGCAACAAC-------AACAGCAA---CAACAACAT---------------------------------------------CAACA---------ACAACAGCAAGAAC---------AACAGCAACAACAACTGCAACAACA---AGAGCAAC-------AGCAAGA------GCAA----CACCA-----------------------------------------A---------------------CATCAACAACAACAGCAACAACAA-CAG---------------------CAACAACAACT------------GCA-ACAACAACTGCAACAA----------CAACT------GCAACAACAAGAG---------CAAC---AACAA---C--------------------------------------------ATCAAC------AACAACAGCAACAACAACAGCAA---CAACA
droAna3 scaffold_13117:3143856-3144069 - GCA-----ACAA------------A---A---------------------------------------CCAACAA------T------------------AA-------------------------------CAACAACAACAACATTGTTAATAA---------------------------TAATAATA---ACAACACTAAT------AAT---------------A-----------------------------------------------------ATAATAATAATAGCAACAAAAACAACAACAACATGTACGCTG--------GCCTTAA-AACAGTAG------------------------TAGA--------------GC-------------------ACAAAATGAACATCAAAAA-T---AGCAACA-------------------------ACAATAGCAAC------------------ATCAA---C--------------------------------------------AACGCCAACAACAACAACAACAACAACAATGGCGA--ACAATC
droBip1 scf7180000396434:620307-620552 - CAA------CAAAAAA---AACAACAAC------------------AAA------------A------ATTACAA------C------------------AATAACAAAAACAAC-------AACAAAAATTACAACAACAA---------------------------------------CAACAAAAATT---------A------------CAACAATAACAACAACAACAAAAATT------------ACAACAAC------A-AC---A---ACAAAA---------------------------------------------------ATTACAACAACAACAA------------------------CAGA--------------AT-TACAACAAAACAACAAAAATT------------ACA-ACAACAACAAACACAA----------AAATT------ACAAAAGCAACAA---------CAAA---AACAA---A--------------------------------------------AACAAC------AACAAAAACAACAACAACAACAA---CAACA
droKik1 scf7180000302698:119932-120179 + GCA-----GCAA------------C---AACATCAGCAGC------AGC------------A------ACAACAT------TCTCCAGAATTAAGCCAACATCAA----------------------------CAGCAACAGCAACACCAGCAG---------------------------CAACATCAACA---------ACAACATCAACAAC---------AACTTCAACAGCAACT------------TCAACAAC---AGCA-GC---A------A-------ATTCA-----------------------------------------A---------CAACAGCAGAAAAATCAACAACAG-------------CAG---------------------CAACATCAACA------------AGA-GC---AACTTCAACAA----------CA---------G---CAACTTCAA---------CAAC---AG------C---A------------GC--------------------------AACATC------AACAGCACCAACAACTTCAACAA---CATC-
droFic1 scf7180000453438:44481-44717 - GCG-----TCAG-GAA---AACAGCAAC------------------AGG------------AACAGCAACAGCAA------G------------------AGCAA------CAGC----------------------AACAG------------CAACAACAACAG---------------CAACAGCAACA---------GCGACAGGATCAGC------------AGCAGCAGCAACA---------GCAACAGGATC---AGC-------AGCAGCAG-------CAACA-----------------------------------------A------CAA---C------------------------AGCAATC-GCAACAGGAGTCGGG---------------------------------ACAA-C---AGCAACAGCAGCAGCAACA-AAA---------TCAGCAGCAGCAG---------CAGCAACAG------G--------------------------------------------ATCATC------AGCAGCAGCAGCAACAACAACAA---CAA--
droEle1 scf7180000491249:3221463-3221709 + CAC----AACACAAAA---GATTACAAC------------AAA---AAC------------A---ATTACAACAA------C------------------AACAA------AAAC-------AATTACAA---CAACAACAA------------------------------------------GAACAATTACAACAACAACAAA---------------------AACAATTACAACAACAACAAAAACAATTACAAC---AACA-AC---A---AAAA-------CA--------------------------------------------ATTA------------------C---------------------G-ACAACAAAAACCATT-A--------CAATAACAACA------------AAA-ACTATTACAACAACAA------CA-AAA---------ACCATTACAACAA---------CAAA---AACCA---T--------------------------------------------TACAAC------AACAACAAAAACCATTACAACAA---CAACA
droRho1 scf7180000762853:122268-122501 - GCA-----GCAGGCGCAACATCAGCAAC------------------AGG------------C------GCAACAA------CAGC---------------------TGCTAATGC-------AGCAACAA---CAACGACAG------------------------------------------CAGCAGCA---------GCAA------------CAACAACAACAACAACAACAACAACA---------ACAACAAC---AACA-AC---A---ACAA-------CAACA-----------------------------------------A------CAA---C------------------------AACAACAA-CAG---------------------CATCAACAGCA------------TCA-ACAGCATCAACAGCAT----------CAACA------GCATCAACAACAA---------CAAC---AGCAG---C--------------------------------------------AGCAGC------AGCAACAACAACAGCAGCAACAG---CAACA
droBia1 scf7180000302126:2974491-2974721 - CAG------TATGAAC---AGCAACAAC------------------AGC------------C------ACAGCAA------C------------------AACGGGAATGGTTTGAACAAAAA------A---CAACAGCAA------------------------------------------CAGCAACA---------ACGGGAGTAA---T------A---TGAACAGTACCAACA---------GCGACAGCAAC---AAC-------AGTATGAA-------CACTA-----------------------------------------A------CAA---C------------------------AGCAACAA-CAG------------------------TATGAACA---------CTAACAA-C---AGCAACAACAGTATGAAC----------------ACTAACAACAG---------CAAC---AACAG---T--------------------------------------------AAGAAC------ACTAACAACAGCAACAACAGCAT---GAACA
droTak1 scf7180000414445:283385-283608 + GCA-----GCAG------------C---AAAATATGCATCATC---ACC------------A------ACAGCAG------C------------------AGCAGCA-------------------CCAA---CAACAGCAG---------------------------------------CAGCAGCATAT---------G------------CAACAGCAGCAGCAACACCAACAGCA------------GCAGCAAC-----------------------------------------------------AACATCAA-----C---------------------------------------AG-------------CAG---------------------CA---------------------GCAG-C------------------AACA-------------TCAACAGCAGC------------------AGCAGCAGCATCAACAACAGCAGCAGCAACAACATCAGAGCATTGGAATGTTTGATGCC------AACGAGGTTAACGATGTCATCCA---GAATC
droEug1 scf7180000409631:95053-95264 + ACAAACAAACAAACAA---ACAAACAA-------------------ACA------------A------ACAA-------------------------------------------------------------CAACAACAA------------------------------------------CAACAACA---------ACAACAA---------CAACA---ACAACAACAACAACA---------ACAACAACAAC---AAC-------AACA---A----CAACAACA-----------------------------------------A------CAA---C------------------------AACAACAA-CAA------------------CAACAACAACA---------------ACAA-CAACAACAACA---ACAACAACA-ACA---------ACAACAACAACAA---------CAAC---AA------C---A------------AC--------------------------AACAAC------AACAACAACAACAACAACAACAA---CAA--
dm3 chr3L:9702015-9702236 + TGG-CGGAGCAGAGCT---ACTGGCAAC------------------AGC------------A------CCAGCAA------C------------------ATCAC----------------------------CACCAACAG------------CAGCAGCAGCAG---------------CAGCATCAACA---------ACAACAGCAGCAGC------------AACATCAACAGCA------------GCAACATC----------------------------------------------------------------------------------------------------------AGCAGCAGCAGCAA-CA------------------------------------------CCAACAA-C---AGCAACA---CCAACAGCA-GCAACA------GCAACAGAAGCAG---------CTCC---------------AGCAGCAGCAGCAGCAGC-----------------------ATCAAT------G-GAGCGCCAACAACGGCAGCAG---CAACC
droSim2 3r:324976-325196 + GAA------CAA---------CTACAAC------AACAAC------AAC------------A------ACTACTA------C------------------AACAACACCA-------------------A---CTACAACAA------------------------------------------CACCAACC---------ACAA------------CGACACCAACTACAACAACAACA------------ACTACAACAACGCCA-AC---T---A-------CAACGACA-----------------------------------------C------CAA---C------------------------TACAACAA-CAA---------------------TAACAACTACT------------ACA-ACAACACCAACTACAA----------CAACA------CCAACCACAACGA---------CACC---AACTA---C--------------------------------------------AACTAC------AACAACGCCAACTACAACGACAT---CAACT
droSec2 scaffold_6:466731-466952 + CGC------CCAGAAC---AACTACAAC------AACAAC------AAC------------A------ACTACTA------C------------------AACAA------CACC----------------------------------AACCACAACGACACCAACTACACCTACAACAACG------------------CCAA------CTAC---------------AACG------------------ACACCAAC---TACG-AC---A------A-------CACCA-----------------------------------------A---------------------CTACAACAACAACAACTACAACAA-CAC---------------------CA---------------------ACTA-C---AACAACA---CCAACTACA-ACA---------ACGACAACTACAA---------CAAC---AC------C---A------------AC--------------------------TACAAC------AACAACTACAACAACGCCAACTA---CAA--
droYak3 X:15323212-15323450 + ACA-----ACAA------------C---AACAACAAC---------GAA------------GAC---TGGC-CTAAATCGACGCCAAATAGAA------------------ACAA-------CACAACAA---CCACAACAA------CAACAACAA---------------------------CAACGACA---GCAACACCAAG------AAC---------------A-----------------------------------------------------ACAAGCACAGAGGCAACCATAACAACAATTGCACCAT-----CAGGATTAGCAA------------------C---------------------C-ACAATAAGCACCAGC---------------------------------ACAA-C---AACAATAGCA----------------------G---CAGCAACAA---------CAAT---AA------G---T------------G--------------CAACAC-------AACA--------ACCACCACCAACAACAACAACAA---CAACA
droEre2 scaffold_4644:1858756-1858992 + CTGCAGAGGCAGGCGG---CGCAACTGC------------------GGC------------T------GCAGCCA------CGTGCAGCCC-----CAGCAAGTG----------------------------CAACAAGTGCAACGC------------------------------------GCACAACA---------A---------------CAACAGCAACTGCAACAATAACA------------ATAATACCATCAGCA-------------ACA-ACAACAATA-----------------------------------------A------CAA---T------------------------AATAATAA-TAC---------------------AAGCAGCAATA------------CAA-CCATTGCCAACAACAA----------CAACA------ACAACAACAACAG---------CAAC---AACAA---T--------------------------------------------AATAAC------AATAACCATTACAACAATTACAA---TAACT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
GTGGCGCGGCAGGAAG---GTCTACAAC------------------AGA------------A------ACAACAA------CGACTAATGAAA------------------ATAC-------AATAACAA---CAACAACAA---------------------------------------CGACAGGAAAC---------A------------CAATAGCAATAGCAACAACAACAACA------------ACAACAAT-------AGCATTA------GAAA-CGAACAAA-----------------------------------------A---------CAACAA------------------------TAGAAA---------------GACTTAGTAGTAGCAACAACT------------TAA-GCAGT-------------TTAAC-ACCAACAACAACACCAACAGGAAAAG---------GAGA---AGGAA---A--------------------------------------------CACACC------AACAACGCCAACAACGACACCAA---CAATCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.....................CTACAAC------------------AGA------------A------ACAACAA------CG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000
dp5
GTGGCGCGGCAGGAAG---GTCTACAAC------------------AGA------------A------ACAACAA------CGACTAATGAAA------------------ATAC-------AATAACAA---CAACAACAA---------------------------------------CAACAGGAAAC---------A------------CAATAGCAATAGCAACAACAACAACA------------ACAACAAT-------AGCATTA------GAAA-CGAACAAA-----------------------------------------A---------CAACAT------------------------TAGAAA---------------GACTTAGTAGTAGCAACAACT------------TAA-GCAGT-------------TTAAC-ACCAACAACAACACCAACAGGAAGAGGAGAAGGACCAAC---ACCAA---C--------------------------------------------AACGCC------AACAATGCCAACAACAACACCAA---CAATCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................................................................................................................................................................................................................TAGCAACAACAACAACA------------ACAACAAT-------.......................................................................................................................................................................................................................................................................................................................................2560.1710100000000
............................................................................................................................................................................................................................CAATAGCAACAACAACAACA------------......................................................................................................................................................................................................................................................................................................................................................20110.0910100000000
.............................................................................................................................................................................................................................AATAGCAACAACAACAACA------------ACA...................................................................................................................................................................................................................................................................................................................................................22160.0610100000000
........................................................................................................................................................................................................................................CAACAACA------------ACAACAAT-------AGC....................................................................................................................................................................................................................................................................................................................................19200.0510100000000
..........................................................................................................................AATAACAA---CAACAACAA---------------------------------------CAACA........................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510010000000
droWil2
GTTGTACAACAACAAC---AACAACAAC------------------AAC------------A------ACAACAA------C------------------AACAACAACAACAAC-------AACAACAA---CAACAACAA---------------------------------------CAACAACAACA---------ACAA------------CAACAACAACAACAACAACAACA------------ACAACAAC---AACA-AC---A---ACAA----CAACAACA-----------------------------------------A------CAA---C------------------------AACAACAA-CAA---------------------CAACAACAACA------------ACA-ACAACAACAACAACAA----------CAACA------ACAACAACAACAA---------CAAC---AACAA---C--------------------------------------------AACAAC------AACAACAACAACAACAACAACAACAACAA--SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
CTGGCTGTCTGGCAAT---GCCGTCAAC------------------AACAACAGCAACAACAACA---ACAACAG------C------------------AACAACAACA-------------------A---CAGCAACAA------------------------------------------CAACAACA---------ACAA------------CAGCAACAGCAACAACAACAACA------------GCAACAACAACAACA-GC---A---ACAA-------CAACA-----------------------------------------A------CAG---C------------------------AACAACAA-CAA---------------------CAGCAACAACA------------ACA-ACAGCAACAACAACAA----------CAGCA------ACAACAACAACAG---------CAAC---AACAA---C--------------------------------------------AACAGC------AACAACAACAACAACAACAACAA---CAGCASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAACAA---CAGCA20200.153003000000000000000000000000000000000000000000000000000000000000
..............................................................ACA---ACAACAG------C------------------AACAACAACA-------------------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102000000000000000010000000100000000000000000000000000000000000000
............................................................................................................................................AA------------------------------------------CAACAACA---------ACAA------------CAGCA....................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000000001000000000000000000000000000000
.......................................................................ACAG------C------------------AACAACAACA-------------------A---CAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................AACA------------ACA-ACAGCAACAACAACAA----------........................................................................................................................................23200.051000000000000000001000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAACAACAACAA----------CAGC....................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................AACAACAACA-GC---A---ACAA-------CAACA-----------------------------------------A------.............................................................................................................................................................................................................................................................23200.051000000000000000001000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................CAACA------------GCAACAACAACAAC........................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000000000100000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAA----------CAGCA------ACAACAACAA...................................................................................................................23200.051000000000000000001000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................AGCAACAACAACAACA------------GCA...................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000000000000000000000000000000000001000
...............................................................................................................................................................................................................................................................................................................................................................................................A---------------------CAGCAACAACA------------ACA-ACAGC.............................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................GCAACAGCAACAACAACAACA------------GC....................................................................................................................................................................................................................................................................................................................................................23200.051000000000000001000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................ACA------------GCAACAACAACAACA-GC---.................................................................................................................................................................................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAA---C--------------------------------------------AACAGC------AACAACAACAA....................23200.051000000000000000001000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................AA-------CAACA-----------------------------------------A------CAG---C------------------------AACAACAA-CAA---------------------.............................................................................................................................................................................................23200.051000000000000000001000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................GCAACAACAACAACA------------GCAAC.................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000001000000000000000000000000000000000000000000000
.......................................................................................................AACAACA-------------------A---CAGCAACAA------------------------------------------CAACAA....................................................................................................................................................................................................................................................................................................................................................................................................................23200.051000000000000000001000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACAG---------CAAC---AACAA---C--------------------------------------------AA.........................................23200.051000000000000000001000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................AACAA-CAA---------------------CAGCAACAACA------------ACA-A.................................................................................................................................................................23200.051000000000000000001000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................A------CAG---C------------------------AACAACAA-CAA---------------------CAGC.........................................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAACAACAACAA---CAGC.25200.051001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAG---------CAAC---AACAA---C--------------------------------------------AACAGC------...............................20200.051001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................A----------CAGCA------ACAACAACAACAG---------C......................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................ACA-GC---A---ACAA-------CAACA-----------------------------------------A------CAG---C------------------------..............................................................................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
.....................................................GCAACAACAACA---ACAACAG------C------------------A.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
droMoj3
GCA-----ACAG------------C---AACAGCAACAGC------AGC------------A------ACAACAA------C------------------AACAACAGTAACAAC-------AACAACAG---CAACGACAG---------------------------------------CAA------------------------------C---------------A-----------------------------------------------------ACAATCACAATAGCAACAACAACAACAACAACAACAG-----C---------------------------------------AG-------------CAG---------------------CAGCAGCAACA---------TTAACAA-C---AGCAACAACATTCACAAC----ATTA------ACAATAACAGCAG---------CAGCAACATTAA---T--------------------------------------------AACAGC------AACAACAACAACAACAACAACAA---CTGTCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...........................................................................................................GTAACAAC-------AACAACAG---CAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................20180.061100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--------------------------------------------AACAGC------AACAACAACAACAACAAC.............25200.051000010
........................................................................CAA------C------------------AACAACAGTAACAAC-------AACAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------ACAATAACAGCAG---------CAGCA..................................................................................................19200.051100000
..A-----ACAG------------C---AACAGCAACAGC------AGC------------A------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000001
droGri2
GCA-----GCAGGAGC---------------AGCTACAGCAACAACAGC------------A------ACAACAA------C------------------------AGCAACAAC-------AACAGCAA---CAACAACAT---------------------------------------------CAACA---------ACAACAGCAAGAAC---------AACAGCAACAACAACTGCAACAACA---AGAGCAAC-------AGCAAGA------GCAA----CACCA-----------------------------------------A---------------------CATCAACAACAACAGCAACAACAA-CAG---------------------CAACAACAACT------------GCA-ACAACAACTGCAACAA----------CAACT------GCAACAACAAGAG---------CAAC---AACAA---C--------------------------------------------ATCAAC------AACAACAGCAACAACAACAGCAA---CAACASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAAGAG---------CAAC---AACA............................................................................................20200.05110
....................................................................ACAACAA------C------------------------AGCAACAAC-------AACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101
droAna3
GCA-----ACAA------------A---A---------------------------------------CCAACAA------T------------------AA-------------------------------CAACAACAACAACATTGTTAATAA---------------------------TAATAATA---ACAACACTAAT------AAT---------------A-----------------------------------------------------ATAATAATAATAGCAACAAAAACAACAACAACATGTACGCTG--------GCCTTAA-AACAGTAG------------------------TAGA--------------GC-------------------ACAAAATGAACATCAAAAA-T---AGCAACA-------------------------ACAATAGCAAC------------------ATCAA---C--------------------------------------------AACGCCAACAACAACAACAACAACAACAATGGCGA--ACAATCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.................................................................................................................................................................................................................................................................................................................................................TTAA-AACAGTAG------------------------TAGA--------------GC-------------------A....................................................................................................................................................................................1911.001000010
.........................................................................................................................................................................................................................................................................................................................................................................................................C-------------------ACAAAATGAACATCAAAAA-T---.............................................................................................................................................................2111.001010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................TGAACATCAAAAA-T---AGCAA........................................................................................................................................................1911.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAACATCAAAAA-T---AGCAACA-------------------------ACA..........................................................................................................................2511.001100000
.....................................................................................................................................................................................................................................................................................................................................G--------GCCTTAA-AACAGTAG------------------------TAG.........................................................................................................................................................................................................................1911.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA-------------------------ACAATAGCAAC------------------ATCAA---C--------------------------------------------AACGCC.....................................2711.001010000
......................................................................................................................................................................................................................................................................................................................................................AACAGTAG------------------------TAGA--------------GC-------------------ACAAAA...............................................................................................................................................................................2011.001000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------------------------ACAATAGCAAC------------------ATCAA---C--------------------------------------------AACGC......................................2311.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC------------------ATCAA---C--------------------------------------------AACGCCAACA.................................1911.001010000
.....................................................................................................................................................................................................................................................................................................................................G--------GCCTTAA-AACAGTAG------------------------TAGA--------------GC-------------------AC...................................................................................................................................................................................2411.001000001
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAACAACAATGGCGA--AC....2111.001000010
..............................................................................................................................................................................................................................................................................................................................................GCCTTAA-AACAGTAG------------------------TAGA--------------GC-------------------ACAAAAT..............................................................................................................................................................................2811.001000010
................................................................................................................................................................................................................................................................................................................AACAACAACAACATGTACGCTG--------GC..................................................................................................................................................................................................................................................................2411.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAACAACAACAACAATGGC..........2820.501010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACA-------------------------ACAATAGCAAC------------------ATC.............................................................................................2020.501010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAACAACAACAACAACAATGGC..........2630.331010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAACAATGGC..........19130.081010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAACAACAACAACAACAAC...................20200.051010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACAACAATGGC..........18200.051010000
droBip1
CAA------CAAAAAA---AACAACAAC------------------AAA------------A------ATTACAA------C------------------AATAACAAAAACAAC-------AACAAAAATTACAACAACAA---------------------------------------CAACAAAAATT---------A------------CAACAATAACAACAACAACAAAAATT------------ACAACAAC------A-AC---A---ACAAAA---------------------------------------------------ATTACAACAACAACAA------------------------CAGA--------------AT-TACAACAAAACAACAAAAATT------------ACA-ACAACAACAAACACAA----------AAATT------ACAAAAGCAACAA---------CAAA---AACAA---A--------------------------------------------AACAAC------AACAAAAACAACAACAACAACAA---CAACASizeHit CountTotal NormTotal
No Reads
droKik1
GCA-----GCAA------------C---AACATCAGCAGC------AGC------------A------ACAACAT------TCTCCAGAATTAAGCCAACATCAA----------------------------CAGCAACAGCAACACCAGCAG---------------------------CAACATCAACA---------ACAACATCAACAAC---------AACTTCAACAGCAACT------------TCAACAAC---AGCA-GC---A------A-------ATTCA-----------------------------------------A---------CAACAGCAGAAAAATCAACAACAG-------------CAG---------------------CAACATCAACA------------AGA-GC---AACTTCAACAA----------CA---------G---CAACTTCAA---------CAAC---AG------C---A------------GC--------------------------AACATC------AACAGCACCAACAACTTCAACAA---CATC-SizeHit CountTotal NormTotal
No Reads
droFic1
GCG-----TCAG-GAA---AACAGCAAC------------------AGG------------AACAGCAACAGCAA------G------------------AGCAA------CAGC----------------------AACAG------------CAACAACAACAG---------------CAACAGCAACA---------GCGACAGGATCAGC------------AGCAGCAGCAACA---------GCAACAGGATC---AGC-------AGCAGCAG-------CAACA-----------------------------------------A------CAA---C------------------------AGCAATC-GCAACAGGAGTCGGG---------------------------------ACAA-C---AGCAACAGCAGCAGCAACA-AAA---------TCAGCAGCAGCAG---------CAGCAACAG------G--------------------------------------------ATCATC------AGCAGCAGCAGCAACAACAACAA---CAA--SizeHit CountTotal NormTotal
No Reads
droEle1
CAC----AACACAAAA---GATTACAAC------------AAA---AAC------------A---ATTACAACAA------C------------------AACAA------AAAC-------AATTACAA---CAACAACAA------------------------------------------GAACAATTACAACAACAACAAA---------------------AACAATTACAACAACAACAAAAACAATTACAAC---AACA-AC---A---AAAA-------CA--------------------------------------------ATTA------------------C---------------------G-ACAACAAAAACCATT-A--------CAATAACAACA------------AAA-ACTATTACAACAACAA------CA-AAA---------ACCATTACAACAA---------CAAA---AACCA---T--------------------------------------------TACAAC------AACAACAAAAACCATTACAACAA---CAACASizeHit CountTotal NormTotal
No Reads
droRho1
GCA-----GCAGGCGCAACATCAGCAAC------------------AGG------------C------GCAACAA------CAGC---------------------TGCTAATGC-------AGCAACAA---CAACGACAG------------------------------------------CAGCAGCA---------GCAA------------CAACAACAACAACAACAACAACAACA---------ACAACAAC---AACA-AC---A---ACAA-------CAACA-----------------------------------------A------CAA---C------------------------AACAACAA-CAG---------------------CATCAACAGCA------------TCA-ACAGCATCAACAGCAT----------CAACA------GCATCAACAACAA---------CAAC---AGCAG---C--------------------------------------------AGCAGC------AGCAACAACAACAGCAGCAACAG---CAACASizeHit CountTotal NormTotal
No Reads
droBia1
CAG------TATGAAC---AGCAACAAC------------------AGC------------C------ACAGCAA------C------------------AACGGGAATGGTTTGAACAAAAA------A---CAACAGCAA------------------------------------------CAGCAACA---------ACGGGAGTAA---T------A---TGAACAGTACCAACA---------GCGACAGCAAC---AAC-------AGTATGAA-------CACTA-----------------------------------------A------CAA---C------------------------AGCAACAA-CAG------------------------TATGAACA---------CTAACAA-C---AGCAACAACAGTATGAAC----------------ACTAACAACAG---------CAAC---AACAG---T--------------------------------------------AAGAAC------ACTAACAACAGCAACAACAGCAT---GAACASizeHit CountTotal NormTotal
No Reads
droTak1
GCA-----GCAG------------C---AAAATATGCATCATC---ACC------------A------ACAGCAG------C------------------AGCAGCA-------------------CCAA---CAACAGCAG---------------------------------------CAGCAGCATAT---------G------------CAACAGCAGCAGCAACACCAACAGCA------------GCAGCAAC-----------------------------------------------------AACATCAA-----C---------------------------------------AG-------------CAG---------------------CA---------------------GCAG-C------------------AACA-------------TCAACAGCAGC------------------AGCAGCAGCATCAACAACAGCAGCAGCAACAACATCAGAGCATTGGAATGTTTGATGCC------AACGAGGTTAACGATGTCATCCA---GAATCSizeHit CountTotal NormTotal
No Reads
droEug1
ACAAACAAACAAACAA---ACAAACAA-------------------ACA------------A------ACAA-------------------------------------------------------------CAACAACAA------------------------------------------CAACAACA---------ACAACAA---------CAACA---ACAACAACAACAACA---------ACAACAACAAC---AAC-------AACA---A----CAACAACA-----------------------------------------A------CAA---C------------------------AACAACAA-CAA------------------CAACAACAACA---------------ACAA-CAACAACAACA---ACAACAACA-ACA---------ACAACAACAACAA---------CAAC---AA------C---A------------AC--------------------------AACAAC------AACAACAACAACAACAACAACAA---CAA--SizeHit CountTotal NormTotal
No Reads
dm3
TGG-CGGAGCAGAGCT---ACTGGCAAC------------------AGC------------A------CCAGCAA------C------------------ATCAC----------------------------CACCAACAG------------CAGCAGCAGCAG---------------CAGCATCAACA---------ACAACAGCAGCAGC------------AACATCAACAGCA------------GCAACATC----------------------------------------------------------------------------------------------------------AGCAGCAGCAGCAA-CA------------------------------------------CCAACAA-C---AGCAACA---CCAACAGCA-GCAACA------GCAACAGAAGCAG---------CTCC---------------AGCAGCAGCAGCAGCAGC-----------------------ATCAAT------G-GAGCGCCAACAACGGCAGCAG---CAACCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAGC-----------------------ATCAAT------G-GAGCGCC......................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAT------G-GAGCGCCAACAACGG..............1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGC-----------------------ATCAAT------G-GAGC.........................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000020000000000000000000
........GCAGAGCT---ACTGGCAAC------------------AGC------------A------CCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAT------G-GAGCGCCAACAACGGC.............2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCA-GCAACA------GCAACAGAAGCAG---------C......................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------G-GAGCGCCAACAACGGCAGCAG---CAAC.2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000010000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................ACAA-C---AGCAACA---CCAACAGCA-G........................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGC-----------------------ATCAAT------G-GAGCGCC......................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000001000000
...........GAGCT---ACTGGCAAC------------------AGC------------A------CCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA------GCAACAGAAGCAG---------CTCC---------------AGCA................................................................................2312.0020000000000000000000000000000000000000010000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-----------------------ATCAAT------G-GAGCGCCAACAACGGC.............2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT------G-GAGCGCCAACAACGGCAG...........2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000010000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGCAA-CA------------------------------------------CCAACAA-C---.............................................................................................................................................................2422.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAT------G-GAGCGCCAACAACGG..............2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................AGCATCAACA---------ACAACAGCAGC..............................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAT------G-GAGCGCCAACAACGGC.............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGC-----------------------ATCAAT------G-GAGCGCCAAC...................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAAT------G-GAGCGCCAACAACG...............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA------GCAACAGAAGCAG---------CTCC---------------AGC.................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACA------GCAACAGAAGCAG---------CTCC---------------A...................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAT------G-GAGCGCCAACAACGGCAG...........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAT------G-GAGCGCCAACAACGGCA............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGC-----------------------ATCAAT------G-GAGCGC.......................2011.0010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGC-----------------------ATCAAT------G-GAGCGCC......................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGC-----------------------ATCAAT------G-GAGCGCC......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAGC-----------------------ATCAAT------G-GAGCGCCA.....................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC-----------------------ATCAAT------G-GAGCGCCAACA..................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA-GCAACA------GCAACAGAAGCAG---------.......................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGC-----------------------ATCAAT------G-GAGCGC.......................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGC-----------------------ATCAAT------G-GAGCGC.......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGC-----------------------ATCAAT------G-GAGCGCC......................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................CAGCAG---------------CAGCATCAACA---------ACAACAGC.................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................CAG---------------CAGCATCAACA---------ACAACAGC.................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------G-GAGCGCCAACAACGGCAGCAG---CAACC2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT------G-GAGCGCCAACAACGGCAGCAG---C....2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAT------G-GAGCGCCAACAACGGCAGCAG---.....2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGC-----------------------ATCAAT------G-GAGCGCCA.....................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCA-GCAACA------GCAACAGAAGCAG---------.......................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAAGCAG---------CTCC---------------AGCAGCAGCA..........................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
........GCAGAGCT---ACTGGCAAC------------------AGC------------A------C.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGC-----------------------ATCAAT------G-GAGC.........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA------GCAACAGAAGCAG---------CTCC---------------AGCAGCAGCA..........................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGC-----------------------ATCAAT------G-GAGC.........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAGC-----------------------ATCAAT------G-GAGCGC.......................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.GG-CGGAGCAGAGCT---ACTGGCAAC------------------AGC------------A------CC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGC-----------------------ATCAAT------G-GAG..........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGAAGCAG---------CTCC---------------AGCAGCAGCAGC........................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................CAG---------------CAGCATCAACA---------ACAACAGCAG...............................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA------GCAACAGAAGCAG---------CTCC---------------A...................................................................................2011.0010000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAT------G-GAGCGCCAACAACGGCAGCAG---C....2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.......................................................................................................................................................................................GCATCAACA---------ACAACAGCAGCAGC------------A..............................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GAGCT---ACTGGCAAC------------------AGC------------A------CCAGCAA------C------------------A.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAT------G-GAGCGCCAACAACGGCAGCAG---C....2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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droSim2
GAA------CAA---------CTACAAC------AACAAC------AAC------------A------ACTACTA------C------------------AACAACACCA-------------------A---CTACAACAA------------------------------------------CACCAACC---------ACAA------------CGACACCAACTACAACAACAACA------------ACTACAACAACGCCA-AC---T---A-------CAACGACA-----------------------------------------C------CAA---C------------------------TACAACAA-CAA---------------------TAACAACTACT------------ACA-ACAACACCAACTACAA----------CAACA------CCAACCACAACGA---------CACC---AACTA---C--------------------------------------------AACTAC------AACAACGCCAACTACAACGACAT---CAACTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................................................................................................................................................................................................................................................................CCA-AC---T---A-------CAACGACA-----------------------------------------C------CAA---C------------------------TACAA.........................................................................................................................................................................................................................2520.50100010000000000000
.........................AAC------AACAAC------AAC------------A------ACTACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1930.33100010000000000000
droSec2
CGC------CCAGAAC---AACTACAAC------AACAAC------AAC------------A------ACTACTA------C------------------AACAA------CACC----------------------------------AACCACAACGACACCAACTACACCTACAACAACG------------------CCAA------CTAC---------------AACG------------------ACACCAAC---TACG-AC---A------A-------CACCA-----------------------------------------A---------------------CTACAACAACAACAACTACAACAA-CAC---------------------CA---------------------ACTA-C---AACAACA---CCAACTACA-ACA---------ACGACAACTACAA---------CAAC---AC------C---A------------AC--------------------------TACAAC------AACAACTACAACAACGCCAACTA---CAA--SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
ACA-----ACAA------------C---AACAACAAC---------GAA------------GAC---TGGC-CTAAATCGACGCCAAATAGAA------------------ACAA-------CACAACAA---CCACAACAA------CAACAACAA---------------------------CAACGACA---GCAACACCAAG------AAC---------------A-----------------------------------------------------ACAAGCACAGAGGCAACCATAACAACAATTGCACCAT-----CAGGATTAGCAA------------------C---------------------C-ACAATAAGCACCAGC---------------------------------ACAA-C---AACAATAGCA----------------------G---CAGCAACAA---------CAAT---AA------G---T------------G--------------CAACAC-------AACA--------ACCACCACCAACAACAACAACAA---CAACASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................................................................TAAATCGACGCCAAATAGAA------------------AC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110000000000
...........................................................................................................................................CAA------CAACAACAA---------------------------CAACG.....................................................................................................................................................................................................................................................................................................................................................................................................................17200.6513000000000013
droEre2
CTGCAGAGGCAGGCGG---CGCAACTGC------------------GGC------------T------GCAGCCA------CGTGCAGCCC-----CAGCAAGTG----------------------------CAACAAGTGCAACGC------------------------------------GCACAACA---------A---------------CAACAGCAACTGCAACAATAACA------------ATAATACCATCAGCA-------------ACA-ACAACAATA-----------------------------------------A------CAA---T------------------------AATAATAA-TAC---------------------AAGCAGCAATA------------CAA-CCATTGCCAACAACAA----------CAACA------ACAACAACAACAG---------CAAC---AACAA---T--------------------------------------------AATAAC------AATAACCATTACAACAATTACAA---TAACTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAA---T--------------------------------------------AATAAC------AATAACC........................1911.0011000000

Generated: 06/08/2015 at 02:42 PM