ID:

dpe_344

 Coordinate:

scaffold_15:1452159-1452229 +

 Confidence:

Known Ortholog

 Class:

Mirtron

 Genomic Locale:

intron

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-23.1 -23.0 -22.4

Flybase annnotation

intron [Dper\GL16575-in]; CDS [Dper\GL16575-cds]; CDS [Dper\GL16575-cds]

No Repeatable elements found

Sense Strand Reads

CGCTGATTATCCTCCTCAGCTTCATCTATCCGTGCACGTACATCACAAAGGTAAGTGGCTATGCCGCGACGGGATTGAACCTCTCATCTCTCACCTCTCACGGCATATCAATCACTTGCAGTACATCACCGCCGAGAAGGAGAAGCAGCTTAAGGAGGTAATGAAGATCAT

**************************************************((((((((.(((((((.((.(((..(((............)))))).)).)))))))....))))))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042

female body

 V057

head

 V050

head

 M021

embryo

 V042

embryo

 V111

male body
...............................................................................................TCTCACGGCATATCAATCACTTGCAG.................................................. 26 0 1 216.00 216 152 27 16 11 10 0
...............................................................................................TCTCACGGCATATCAATCACTTGCA................................................... 25 0 1 173.00 173 136 13 10 10 4 0
...............................................................................................TCTCACGGCATATCAATCACTTG..................................................... 23 0 1 106.00 106 96 9 1 0 0 0
...............................................................................................TCTCACGGCATATCAATCACTTGC.................................................... 24 0 1 62.00 62 58 3 1 0 0 0
...............................................................................................TCTCACGGCATATCAATCACTT...................................................... 22 0 1 59.00 59 20 17 12 7 2 1
...............................................................................................TCTCACGGCATATCAATCACTTGCAGT................................................. 27 0 1 19.00 19 7 7 4 0 0 1
...............................................................................................TCTCACGGCATATCAATCACT....................................................... 21 0 1 19.00 19 7 6 5 1 0 0
................................................................................................CTCACGGCATATCAATCACTTGCAG.................................................. 25 0 1 12.00 12 12 0 0 0 0 0
..................................................GTAAGTGGCTATGCCGCGACGGGT................................................................................................. 24 1 1 10.00 10 3 2 2 0 0 3
..................................................GTAAGTGGCTATGCCGCGACGGG.................................................................................................. 23 0 1 9.00 9 7 2 0 0 0 0
................................................................................................CTCACGGCATATCAATCACTTGCA................................................... 24 0 1 8.00 8 8 0 0 0 0 0
...............................................................................................TCTCACGGCATATCAATC.......................................................... 18 0 1 8.00 8 1 0 0 7 0 0
...............................................................................................TCTCACGGGATATCAATCACTTGCA................................................... 25 1 1 6.00 6 6 0 0 0 0 0
...............................................................................................TCTCACGGCATATCAATCACTTGCAGA................................................. 27 1 1 5.00 5 1 2 0 2 0 0
...............................................................................................TCTCACGGGATATCAATCACTTGCAG.................................................. 26 1 1 5.00 5 5 0 0 0 0 0
...................................................TAAGTGGCTATGCCGCGACGGGT................................................................................................. 23 1 1 5.00 5 0 2 1 0 0 2
...............................................................................................TCTCACGGGATATCAATCACTTG..................................................... 23 1 1 4.00 4 4 0 0 0 0 0
...................................................TAAGTGGCTATGCCGCGACGGG.................................................................................................. 22 0 1 4.00 4 4 0 0 0 0 0
.......................................................................................................................................GAAGGAGAAGCAGCTTAAGGA............... 21 0 1 4.00 4 0 0 0 0 0 4
................................................................................................CTCACGGCATATCAATCACTTGC.................................................... 23 0 1 4.00 4 4 0 0 0 0 0
................................................................................................CTCACGGCATATCAATCACTTG..................................................... 22 0 1 4.00 4 4 0 0 0 0 0
...............................................................................................TCTCACGGCATATCAATCACTTGCAC.................................................. 26 1 1 3.00 3 2 1 0 0 0 0
................................................................................................CTCACGGCATATCAATCACTT...................................................... 21 0 1 3.00 3 1 2 0 0 0 0
...............................................................................................TCTCACGGCATATCAATCACTTGCAA.................................................. 26 1 1 2.00 2 2 0 0 0 0 0
...............................................................................................TCTCACGGAATATCAATCACTTGCAG.................................................. 26 1 1 2.00 2 2 0 0 0 0 0
...............................................................................................TCTCACGGCATATCAATCACTGGC.................................................... 24 1 1 2.00 2 2 0 0 0 0 0
...............................................................................................CCTCACGGCATATCAATCACTTGCAG.................................................. 26 1 1 2.00 2 1 1 0 0 0 0
...............................................................................................ACTCACGGCATTTCATTCACTTGCAG.................................................. 26 3 1 2.00 2 2 0 0 0 0 0
.................................................................................................TCTCGGCATATCAATCACTTGCAGT................................................. 25 1 1 2.00 2 0 0 0 0 0 2
...............................................................................................TCTCACGGAATATCAATCACTTG..................................................... 23 1 1 2.00 2 2 0 0 0 0 0
...............................................................................................TCTCACGGCATATCAATCACTTGTAG.................................................. 26 1 1 2.00 2 2 0 0 0 0 0
...............................................................................................TCTCACGGCATATCAATCACTTCC.................................................... 24 1 1 2.00 2 1 1 0 0 0 0
..............................................................................................TTCTCACGGCATATCAATCACTTGCAG.................................................. 27 1 1 2.00 2 2 0 0 0 0 0
...............................................................................................TCTCACGGCATATCAATCACTTGG.................................................... 24 1 1 2.00 2 2 0 0 0 0 0
...............................................................................................TCTCACGGGATATCAATCACTT...................................................... 22 1 1 2.00 2 2 0 0 0 0 0
...................................................TAAGTGGCTATGCCGCGACGGGA................................................................................................. 23 0 1 2.00 2 0 1 0 0 1 0
...............................................................................................ACTCACGGCATTTCATTCACTTG..................................................... 23 3 1 2.00 2 0 0 0 2 0 0
...............................................................................................TCTCACGGCATATCAATCACTTGT.................................................... 24 1 1 2.00 2 2 0 0 0 0 0
...............................................................................................TCTCACGGAATATCAATCACTTGCA................................................... 25 1 1 2.00 2 2 0 0 0 0 0
...............................................................................................TCTCACGGCATATCAATCACTTGCAT.................................................. 26 1 1 2.00 2 1 1 0 0 0 0
..................................................GTAAGTGGCTATGCCGCGACGGGG................................................................................................. 24 1 1 2.00 2 0 1 1 0 0 0
...............................................................................................TCTCACGGTATATCAATCACTTGCA................................................... 25 1 1 2.00 2 2 0 0 0 0 0
...................................................TAAGTGGCTATGCCGCGACGG................................................................................................... 21 0 1 2.00 2 2 0 0 0 0 0
...............................................................................................TCTCACGGCATATCAATCAC........................................................ 20 0 1 2.00 2 2 0 0 0 0 0
...............................................................................................TCTCACGGCATATCATTCACTTGCAG.................................................. 26 1 1 1.00 1 0 1 0 0 0 0
...............................................................................................TCTCACGGCATATCAATCTCTT...................................................... 22 1 1 1.00 1 0 1 0 0 0 0
...............................................................................................TCTCAAGGCATATCCATCACTT...................................................... 22 2 1 1.00 1 0 1 0 0 0 0
.........................................................................................................................................AGGAGAAGCAGCTTAAGGAGGTAAT......... 25 0 1 1.00 1 1 0 0 0 0 0
.....................................................................................ATCTCTCACCTCTCACGGCATATC.............................................................. 24 0 1 1.00 1 1 0 0 0 0 0
...............................................................................................TCTCACGGCATATCAATCACTTGA.................................................... 24 1 1 1.00 1 0 0 1 0 0 0
...............................................................................................................................................AGCAGCTTAAGGAGGTAATG........ 20 0 1 1.00 1 0 0 0 1 0 0
...............................................................................................TCGCACGGCATATCAATCACT....................................................... 21 1 1 1.00 1 0 1 0 0 0 0
...............................................................................................TCTCACGGGATATCAATCACT....................................................... 21 1 1 1.00 1 1 0 0 0 0 0
..................................................GTAAGTGGCTATGCCCCGACGGGT................................................................................................. 24 2 1 1.00 1 0 1 0 0 0 0
...............................................................................................TCTAACGGCCTATCAATCAGTTGCAG.................................................. 26 3 1 1.00 1 0 0 0 0 1 0
.................................................................................................ACACGGCATATCAATCACTTGCAGA................................................. 25 2 1 1.00 1 0 1 0 0 0 0
...............................................................................................TCTCACAGCATATCAATCACTTGCAG.................................................. 26 1 1 1.00 1 0 1 0 0 0 0
...............................................................................................TCCCACGGCATATCAATCACTTGCAG.................................................. 26 1 1 1.00 1 1 0 0 0 0 0
...............................................................................................TCTCACGGCATATCATTCACTTGT.................................................... 24 2 1 1.00 1 0 1 0 0 0 0
...............................................................................................TCTCACGGGATATCAATCACTCGCAG.................................................. 26 2 1 1.00 1 1 0 0 0 0 0
...............................................................................................TCGCACGGCATATCAATCACTT...................................................... 22 1 1 1.00 1 0 1 0 0 0 0
...............................................................................................TCTCACGGCATATCAATCACCTGCAG.................................................. 26 1 1 1.00 1 1 0 0 0 0 0
...............................................................................................GCTCACTGCATATCAATCACTTGCAG.................................................. 26 2 1 1.00 1 0 1 0 0 0 0
..............................................................................................ATCTCACGGCATATCAATCACTTGCAG.................................................. 27 1 1 1.00 1 1 0 0 0 0 0
...............................................................................................TCTCACTGCATATCAATCACTTGCAG.................................................. 26 1 1 1.00 1 0 1 0 0 0 0
...............................................................................................TCTCACGGTATATCAATCACTTG..................................................... 23 1 1 1.00 1 1 0 0 0 0 0
.................................................................................................TCACGGCATATCAATCACTTGCA................................................... 23 0 1 1.00 1 1 0 0 0 0 0
...............................................................................................TATCACGGCATATCAATCACTT...................................................... 22 1 1 1.00 1 0 1 0 0 0 0
...................................................................................................................................................GCTTAAGGAGGTAATGAAG..... 19 0 1 1.00 1 0 0 0 0 1 0
................................................................................................CTCACGGCGTATCAATCACTTCCAG.................................................. 25 2 1 1.00 1 1 0 0 0 0 0
...............................................................................................TCTCACGTCATATCAATCACTTGCA................................................... 25 1 1 1.00 1 0 0 1 0 0 0
.................................................................................................TCACGGCATATCAATCACTTGCAG.................................................. 24 0 1 1.00 1 0 1 0 0 0 0
..................................................GTAAGTGGATATGCCGCGACGGG.................................................................................................. 23 1 1 1.00 1 1 0 0 0 0 0
...............................................................................................TCTCACGGCATATCAATGACTT...................................................... 22 1 1 1.00 1 0 1 0 0 0 0
.............................................................................................CTTCTCACGGCATATCAATCACTTGCAG.................................................. 28 1 1 1.00 1 1 0 0 0 0 0
.....................................................AGTGGCTATGCCGCGACGGGT................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0
...................................................................................................ACGGCATATCAATCACTTGCA................................................... 21 0 1 1.00 1 1 0 0 0 0 0
...............................................................................................TCGCACGGCATATCAAGCACT....................................................... 21 2 1 1.00 1 0 1 0 0 0 0
...............................................................................................TCTCACGGGATATCAATCACTTGCAGT................................................. 27 1 1 1.00 1 1 0 0 0 0 0
................................................................................................CTCACGGCATATCAATCACTTGCAGT................................................. 26 0 1 1.00 1 1 0 0 0 0 0
.................................................................................................................................................CAGCTTAAGGAGGTAATGA....... 19 0 1 1.00 1 1 0 0 0 0 0
.......................................................................................................................................GAAGGAGAAGCAGCTTAAGGAG.............. 22 0 1 1.00 1 1 0 0 0 0 0
..............................................................................................GTCTCACGGCATATCAATCACTTG..................................................... 24 1 1 1.00 1 1 0 0 0 0 0
..................................................GTAAGTGGCTATGCCGCGACGGGA................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0
...............................................................................................TCTCACGGCATATCAATCACTTGGAG.................................................. 26 1 1 1.00 1 1 0 0 0 0 0
...............................................................................................TCTCACGGCATATCAATCACTAG..................................................... 23 1 1 1.00 1 1 0 0 0 0 0
................................................................................................CTCACGGCATATCAATCACTTGCAGTT................................................ 27 1 1 1.00 1 1 0 0 0 0 0
...............................................................................................TCTCACGGCATATCAATCACTAGC.................................................... 24 1 1 1.00 1 1 0 0 0 0 0
...............................................................................................TCTCACGGGATATCAATCACTTGC.................................................... 24 1 1 1.00 1 1 0 0 0 0 0
...............................................................................................TATCACAGCATATTAATCACTT...................................................... 22 3 1 1.00 1 0 1 0 0 0 0
...............................................................................................TCTCACGGGATAGCAATCACTTGC.................................................... 24 2 1 1.00 1 1 0 0 0 0 0
..........................................................................................................................ACATCACCGCCGAGAAGGAGAA........................... 22 0 1 1.00 1 0 0 0 0 0 1
...............................................................................................TCTCACGGCATACCAATCACTTGCAG.................................................. 26 1 1 1.00 1 1 0 0 0 0 0
.........................................................................ATTGAACCTCTCATCTCTCAC............................................................................. 21 0 1 1.00 1 1 0 0 0 0 0
...............................................................................................TCTCACGGAATATCAATCACTT...................................................... 22 1 1 1.00 1 0 1 0 0 0 0
..................................................GTAAGTGGCTATGCCCCGACGGG.................................................................................................. 23 1 1 1.00 1 0 1 0 0 0 0
...............................................................................................TCGCACGGCATATAAATCACTT...................................................... 22 2 1 1.00 1 0 1 0 0 0 0
................................................................................................CTCACGGCATATCAATCACT....................................................... 20 0 1 1.00 1 1 0 0 0 0 0
...............................................................................................TCTCACGGAATATCAATCACTTGC.................................................... 24 1 1 1.00 1 1 0 0 0 0 0
.................................................................................................TCACGGCATATCAATCACTT...................................................... 20 0 1 1.00 1 0 1 0 0 0 0
...............................................................................................TCTCACGGCATATCACTCACTT...................................................... 22 1 1 1.00 1 0 0 1 0 0 0
...............................................................................................TCTCACGGCTTATCAATCACTTGCAG.................................................. 26 1 1 1.00 1 0 1 0 0 0 0
...............................................................................................TCTCACGGCATATCAATCACCTCCA................................................... 25 2 1 1.00 1 0 1 0 0 0 0
...............................................................................................TCTCACGGTATATCAATCACTTGCAG.................................................. 26 1 1 1.00 1 1 0 0 0 0 0
..............................................................................................................................CACCGCCGAGAAGGAGAAGC......................... 20 0 1 1.00 1 1 0 0 0 0 0
...............................................................................................TCTCACGGCATATCAATCACTTGCT................................................... 25 1 1 1.00 1 0 0 0 0 1 0
...........................................................................................................................................GAGAAGCAGCTTAAGGAGGTAATGAA...... 26 0 1 1.00 1 0 0 0 0 0 1
.................................................................................................TCACGGCATATCAATCACTTGCAA.................................................. 24 1 1 1.00 1 1 0 0 0 0 0
..................................................GTAAGTGGCTATGTCGCGACGGGT................................................................................................. 24 2 1 1.00 1 0 1 0 0 0 0
..............................................................................................CTCTCACCGCATATCAATCACTT...................................................... 23 1 1 1.00 1 0 1 0 0 0 0
...............................................................................................TCTCACGGCAAATCAATCACTTGCA................................................... 25 1 1 1.00 1 1 0 0 0 0 0
...............................................................................................TCTCACGGCATATCAATCACTGGCA................................................... 25 1 1 1.00 1 1 0 0 0 0 0
...............................................................................................TCTCACGGCAGATCAATCACTT...................................................... 22 1 1 1.00 1 0 1 0 0 0 0
...............................................................................................TCTCACGGGATATCAATCACTTGCAA.................................................. 26 2 1 1.00 1 1 0 0 0 0 0
...............................................................................................ACTCACGGCATATCAATCACTTGCA................................................... 25 1 1 1.00 1 1 0 0 0 0 0
.............................................................................................................................................GAAGCAGCTTAAGGAGGT............ 18 0 1 1.00 1 0 0 0 0 0 1
......................................................GTGGCTATGCCGCGACGGG.................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0
...............................................................................................ACTCACGGCATTTCATTCACTTGCA................................................... 25 3 1 1.00 1 1 0 0 0 0 0
...............................................................................................TCTCACGGCATATCAATCACTTTCAG.................................................. 26 1 1 1.00 1 0 0 1 0 0 0
...........................................................................................................................CATCACCGCCGAGAAGGA.............................. 18 0 1 1.00 1 1 0 0 0 0 0
...............................................................................................TCTCACGGCATATCAATCACTTGGA................................................... 25 1 1 1.00 1 1 0 0 0 0 0
...............................................................................................TCTCACGGCATATCAGTCACTTGCT................................................... 25 2 1 1.00 1 0 1 0 0 0 0
..............................................................................................TTCTCACGGCATATCAATCACTTGCAA.................................................. 27 2 1 1.00 1 1 0 0 0 0 0
..............................................................................................GTCTCACGGCATATCAATCACTTGCAG.................................................. 27 1 1 1.00 1 1 0 0 0 0 0
......................CATCTATCCGTGCACGTAC.................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0
...............................................................................................TTTCACGGCATATCAATCACTTGCAG.................................................. 26 1 1 1.00 1 1 0 0 0 0 0
...............................................................................................TCTCACGGCATATCAATCACTTGCCG.................................................. 26 1 1 1.00 1 0 1 0 0 0 0
..................................................GTAAGTGGGTATGCCGCGACGGG.................................................................................................. 23 1 1 1.00 1 1 0 0 0 0 0
....................................................................................................................................CGTGAAGGAATAGCAGCTT.................... 19 3 20 0.25 5 3 0 0 0 0 2
............................................................................GAACCTCGCATCCTTCACC............................................................................ 19 3 12 0.25 3 1 0 0 2 0 0
...........................................................................................................................................GAGAAGCAGCGTAAGGAGC............. 19 2 7 0.14 1 0 0 0 0 1 0
..................................................................................................................................GCCGAGAAGGAGGAGCAG....................... 18 1 9 0.11 1 1 0 0 0 0 0

Anti-sense strand reads

GCGACTAATAGGAGGAGTCGAAGTAGATAGGCACGTGCATGTAGTGTTTCCATTCACCGATACGGCGCTGCCCTAACTTGGAGAGTAGAGAGTGGAGAGTGCCGTATAGTTAGTGAACGTCATGTAGTGGCGGCTCTTCCTCTTCGTCGAATTCCTCCATTACTTCTAGTA

**************************************************((((((((.(((((((.((.(((..(((............)))))).)).)))))))....))))))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042

female body

 V111

male body
.......................................................................CCTAACTTGGACACTAGGGA................................................................................ 20 3 2 0.50 1 1 0
......................................................................CCCTAGCTTGGCGACTAG................................................................................... 18 3 20 0.30 6 5 1
.....................................................................GCCCTAGCTTGGCGACTAG................................................................................... 19 3 9 0.11 1 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droPer2 scaffold_15:1452109-1452279 + dpe_344 confident CGCTGATTATCCTCCTCAGCTTCATCTATCCGTGCACGTACATCACAAAGGTAAGTGG--------CTATGCCGCG-ACGGGATTG--------A------A---C------CTCT-CAT-CTCTCACCTCT--CACGGC-ATA--TCAAT-CACTTGCAGTACATCACCGCCGAGAAGGAGAAGCAGCTTAAGGAGGTAATGAAGATCAT
dp5 XL_group1a:9058655-9058825 + dps-mir-2535 Known_mirbase CGCTGATTATCCTCCTCAGCTTCATCTATCCGTGCACGTACATCACAAAGGTAAGTGG--------CTATGCCGCG-ACGGGATTG--------A------A---C------CTCT-CAT-CTCTCACCTCT--CACGGC-ATA--TCAAT-CACTTGCAGTACATCACCGCCGAGAAGGAGAAGCAGCTCAAGGAGGTAATGAAGATCAT
droWil2 scf2_1100000004515:164744-164800 - C----------------------------------------------------------------------------------------------------------------------------------------------------------TTACAGTACATTACATCGGAGAAGGAGAAACAACTGAAGGAGGTGATGAAAATAAT
droVir3 scaffold_12970:7928276-7928355 - C-------------------------------------------------------------------------------------------------------------------------------TTCT--CACGAC-ATCCCTTAAT-CCCTTGCAGTACGTTGCCAACGAAAAGGAATTGCAACTGAAGGAGGTCATGAAAATAAT
droMoj3 scaffold_6482:1598135-1598194 + CCCTAATTATTCTGCTAAGTTTCATCTATCCGTGCACATGCATAACCAGGGTAAGTAA--------CT-----------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15203:11132581-11132751 + CATTGATAATACTGCTGAGCTTCATCTATCCCTGTACCTACATTACTAAGGTATGTT--------------CGA------TGATTT--------TGGTTTTTTTTGGCT---T----T--ACTTTCACCGTTTACACGACAATT--TCATC-CTTTTGCAGTACGTGACCAGTGAGAAGGAGAAGCAGCTGAAGGAGGTGATGAAAATAAT
droAna3 scaffold_13337:14423181-14423280 - CGTTCATTATTATGCTGAGCTTTATATATCCTAGCACCGTGGTCGCCAGAG---------------------------------------------------------------------------------------------------------------CCGTAACCAACGAAAAGGAGCTGCAGTTGAAGGAGATCATGAAGCTAAT
droBip1 scf7180000396733:700607-700772 + CGCTGATCATACTGCTCAGTTTCATATATCCCTGCACGTATATAACAAAGGTGAGAGGGACGAGGTCTATA----------------------------GCTTTCGGGTTGTG----T--A------ATACT--TTAAAT-ATT--TTATTCCAATTTCAGTATATAACCGCCGAAAAGGAAAAACAACTGAAGGAAGTCATGAAGATCAT
droKik1 scf7180000302395:540372-540537 - CACTGATCATCTTGCTGAGCTTCATCTATCCGTGCACGTACATCACCAAGGTAAGTCT--------C-----CGAGAACGGGAACGAATCGCACAGATCCATATCT------G----T--ATC----------------T-GTA--TCCTT-CTTGTGTAGTACATCACCGCCGAGAAGGAGAAGCAGCTCAAGGAGGTGATGAAGATCAT
droFic1 scf7180000454077:620807-620969 - CGTTGATTATACTGCTCAGCTTCATTTATCCCTGCACGTACATCACCAAGGTAAGTTT--------ATATTTATTT-GTGTTGGT---------------------------G----T--ACCTCCTCCACT--CACAAC-ATT--TCATT-CACCTGCAGTTCATTACCGCCGAGAAGGAGAAGCAGCTCAAGGAGGTGATGAAGATCAT
droEle1 scf7180000490214:747345-747515 + CGCTAATCATACTGCTGAGCTTCATCTATCCGTGCACGTACATCACCAAGGTAAGTGG--------GTATGCCG------GGACTG--------TGGTTCTAAATG------C----C--ATCACCACCACT--CACGGC-ATT--TCATT-CACTTGCAGTACATCACCGCCGAGAAGGAGAAACAGCTCAAGGAGGTGATGAAGATCAT
droRho1 scf7180000780082:43736-43902 + CGCTGATCATACTGCTGAGCTTCATCTATCCCTGCACGTACATCACCAAGGTAAGTGG--------GTATGCCG------GGATTG--------TGGTTAAT----------A----C--ACCTCCTCCACT--CACGGC-ATT--TCATT-CACTTGCAGTACATCACCGCCGAGAAGGAGAAACAGCTGAAGGAGGTGATGAAGATCAT
droBia1 scf7180000302187:362196-362368 + CGCTGATCATACTGCTCAGCTTCATCTACCCCTGCACGTACATCACCAAAGTAAGTGG--------CCATGCCG------GGATTG--------TGGTTTAA---C------CAGA-GGTTCCTCCTCCACT--CACGGC-ATT--TCATT-CACTTGCAGTACATCACCGCCGAGAAGGAGAAACAGCTCAAGGAGGTGATGAAGATCAT
droTak1 scf7180000415158:278047-278220 + CGCTGATCATACTGCTGAGCTTCATCTATCCCTGCACGTACATCACCAAGGTAAGTGG--------CTATGCCG------GGATTG--------TGGTTTACAATA--------GAAAG-ATCCCCTCCACT--CACGGC-ATT--TCATT-CACTTGCAGTACATCACCGCCGAGAAGGAGAAGCAGCTGAAGGAGGTGATGAAGATCAT
droEug1 scf7180000408193:312993-313163 + CGCTGATCATACTGTTGAGCTTCATCTATCCATGCACGTATATCACCAAGGTAAGTGG--------CTATGCCG------GGATCG--------TGGTTGATCTAT------G----T--ACCTTCTCCACT--CACGGC-ATT--TCATT-CACTTGTAGTACATCACCGCTGAAAAGGAGAAGCAGCTCAAGGAGGTAATGAAGATCAT
dm3 chrX:21169252-21169422 - dme-mir-2535b Known_mirbase CGCTGATCATACTGTTGAGCTTCATTTATCCCTGCACGTACATCACTAAGGTAAGTGA--------CTATGCCG------GGATTG--------TGGTTATTGAAC------T----T--AGCGTCTCCACT--CACGGC-ATT--TCATT-CACTTGCAGTACATCACCGCCGAGAAGGAGAAACAGCTGAAGGAGGTGATGAAGATCAT
droSim2 x:19901605-19901775 - dsi_22 confident CGCTGATCATACTGCTGAGCTTCATTTATCCCTGCACGTACATCACCAAGGTAAGTGA--------CTATGCCG------GGATTG--------TGGTTATTATAC------T----T--AGCGTCTCCACT--CACGGC-ATT--TCATT-CACTTGCAGTACATCACCGCCGAGAAGGAGAAACAGCTGAAGGAGGTGATGAAGATCAT
droSec2 scaffold_8:3476259-3476429 - dse_87 confident CGCTGATCATACTGCTGAGCTTCATTTATCCCTGCACGTACATCACCAAGGTAAGTGA--------CTATGCCG------GGATTG--------TGGTTATTATAC------T----T--AGAGTCTCCACT--CACGGC-ATT--TCATT-CACTTGCAGTACATCACCGCCGAGAAGGAGAAACAGCTGAAGGAGGTGATGAAGATCAT
droYak3 X:20344975-20345145 - dya_174 confident CGCTGATCATACTGCTGAGCTTTATTTACCCATGCACGTACATCACCAAGGTAAGTGA--------CAATGCCG------GGATTG--------TGGTTATTGAAA------A----T--ACCTTCTCCACT--CACGGC-ATT--ATATT-CACTTGCAGTACATCACCGCCGAGAAGGAGAAACAGCTCAAGGAGGTGATGAAGATCAT
droEre2 scaffold_4690:17698609-17698779 - der_64 confident CGCTGATCATACTGTTGAGCTTTATTTATCCCTGCACGTACATCACCAAGGTAAGTGA--------CAGTGCCG------GGATTG--------TGGTTATTAAAA------A----T--ACCTTCTCCACT--CACGGC-ATT--TCATT-CACTTGCAGTACATCACCGCCGAGAAGGAGAAACAGCTCAAGGAGGTGATGAAGATCAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
CGCTGATTATCCTCCTCAGCTTCATCTATCCGTGCACGTACATCACAAAGGTAAGTGG--------CTATGCCGCG-ACGGGATTG--------A------A---C------CTCT-CAT-CTCTCACCTCT--CACGGC-ATA--TCAAT-CACTTGCAGTACATCACCGCCGAGAAGGAGAAGCAGCTTAAGGAGGTAATGAAGATCATSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
.................................................................................................................................TCT--CACGGC-ATA--TCAAT-CACTTGCAG..................................................261216.00216111521016270
.................................................................................................................................TCT--CACGGC-ATA--TCAAT-CACTTGCA...................................................251173.0017310136410130
.................................................................................................................................TCT--CACGGC-ATA--TCAAT-CACTTG.....................................................231106.001060960190
.................................................................................................................................TCT--CACGGC-ATA--TCAAT-CACTTGC....................................................24162.00620580130
.................................................................................................................................TCT--CACGGC-ATA--TCAAT-CACTT......................................................22159.0059720212171
.................................................................................................................................TCT--CACGGC-ATA--TCAAT-CACTTGCAGT.................................................27119.0019070471
.................................................................................................................................TCT--CACGGC-ATA--TCAAT-CACT.......................................................21119.0019170560
..................................................................................................................................CT--CACGGC-ATA--TCAAT-CACTTGCAG..................................................25112.00120120000
..................................................GTAAGTGG--------CTATGCCGCG-ACGGGT................................................................................................................................24110.0010030223
..................................................GTAAGTGG--------CTATGCCGCG-ACGGG.................................................................................................................................2319.009070020
..................................................................................................................................CT--CACGGC-ATA--TCAAT-CACTTGCA...................................................2418.008080000
.................................................................................................................................TCT--CACGGC-ATA--TCAAT-C..........................................................1818.008710000
.................................................................................................................................TCT--CACGGC-ATA--TCAAT-CACTTGCAGA.................................................2715.005210020
...................................................TAAGTGG--------CTATGCCGCG-ACGGGT................................................................................................................................2315.005000122
...................................................TAAGTGG--------CTATGCCGCG-ACGGG.................................................................................................................................2214.004040000
...............................................................................................................................................................................GAAGGAGAAGCAGCTTAAGGA...............2114.004000004
..................................................................................................................................CT--CACGGC-ATA--TCAAT-CACTTGC....................................................2314.004040000
..................................................................................................................................CT--CACGGC-ATA--TCAAT-CACTTG.....................................................2214.004040000
.................................................................................................................................TCT--CACGGC-ATA--TCAAT-CACTTGCAC..................................................2613.003020010
..................................................................................................................................CT--CACGGC-ATA--TCAAT-CACTT......................................................2113.003010020
.................................................................................................................................TCT--CACGGC-ATA--TCAAT-CACTTGCAA..................................................2612.002020000
.................................................................................................................................TCT--CACGGC-ATA--TCAAT-CACTTGG....................................................2412.002020000
...................................................TAAGTGG--------CTATGCCGCG-ACGGGA................................................................................................................................2312.002001010
.................................................................................................................................TCT--CACGGC-ATA--TCAAT-CACTTGT....................................................2412.002020000
.................................................................................................................................TCT--CACGGC-ATA--TCAAT-CACTTGCAT..................................................2612.002010010
..................................................GTAAGTGG--------CTATGCCGCG-ACGGGG................................................................................................................................2412.002000110
...................................................TAAGTGG--------CTATGCCGCG-ACGG..................................................................................................................................2112.002020000
.................................................................................................................................TCT--CACGGC-ATA--TCAAT-CAC........................................................2012.002020000
.................................................................................................................................................................................AGGAGAAGCAGCTTAAGGAGGTAAT.........2511.001010000
......................................................................................................................AT-CTCTCACCTCT--CACGGC-ATA--TC...............................................................2411.001010000
.................................................................................................................................TCT--CACGGC-ATA--TCAAT-CACTTGA....................................................2411.001000100
.......................................................................................................................................................................................AGCAGCTTAAGGAGGTAATG........2011.001100000
...................................................................................................................................T--CACGGC-ATA--TCAAT-CACTTGCA...................................................2311.001010000
...........................................................................................................................................................................................GCTTAAGGAGGTAATGAAG.....1911.001001000
...................................................................................................................................T--CACGGC-ATA--TCAAT-CACTTGCAG..................................................2411.001000010
.....................................................AGTGG--------CTATGCCGCG-ACGGGT................................................................................................................................2111.001010000
.......................................................................................................................................ACGGC-ATA--TCAAT-CACTTGCA...................................................2111.001010000
..................................................................................................................................CT--CACGGC-ATA--TCAAT-CACTTGCAGT.................................................2611.001010000
.........................................................................................................................................................................................CAGCTTAAGGAGGTAATGA.......1911.001010000
...............................................................................................................................................................................GAAGGAGAAGCAGCTTAAGGAG..............2211.001010000
..................................................GTAAGTGG--------CTATGCCGCG-ACGGGA................................................................................................................................2411.001010000
..................................................................................................................................CT--CACGGC-ATA--TCAAT-CACTTGCAGTT................................................2711.001010000
..................................................................................................................................................................ACATCACCGCCGAGAAGGAGAA...........................2211.001000001
..................................................................................ATTG--------A------A---C------CTCT-CAT-CTCTCAC...................................................................................2111.001010000
..................................................................................................................................CT--CACGGC-ATA--TCAAT-CACT.......................................................2011.001010000
...................................................................................................................................T--CACGGC-ATA--TCAAT-CACTT......................................................2011.001000010
......................................................................................................................................................................CACCGCCGAGAAGGAGAAGC.........................2011.001010000
.................................................................................................................................TCT--CACGGC-ATA--TCAAT-CACTTGCT...................................................2511.001001000
...................................................................................................................................................................................GAGAAGCAGCTTAAGGAGGTAATGAA......2611.001000001
...................................................................................................................................T--CACGGC-ATA--TCAAT-CACTTGCAA..................................................2411.001010000
.....................................................................................................................................................................................GAAGCAGCTTAAGGAGGT............1811.001000001
......................................................GTGG--------CTATGCCGCG-ACGGG.................................................................................................................................1911.001010000
...................................................................................................................................................................CATCACCGCCGAGAAGGA..............................1811.001010000
......................CATCTATCCGTGCACGTAC..........................................................................................................................................................................1911.001010000
dp5
CGCTGATTATCCTCCTCAGCTTCATCTATCCGTGCACGTACATCACAAAGGTAAGTGG--------CTATGCCGCG-ACGGGATTG--------A------A---C------CTCT-CAT-CTCTCACCTCT--CACGGC-ATA--TCAAT-CACTTGCAGTACATCACCGCCGAGAAGGAGAAGCAGCTCAAGGAGGTAATGAAGATCATSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
.................................................................................................................................TCT--CACGGC-ATA--TCAAT-CACTTGCA...................................................2511041.0010411817788628194035
.................................................................................................................................TCT--CACGGC-ATA--TCAAT-CACTTGCAG..................................................2611039.0010391833886619129092
.................................................................................................................................TCT--CACGGC-ATA--TCAAT-CACTTGC....................................................241892.00892138566414472238
.................................................................................................................................TCT--CACGGC-ATA--TCAAT-CACTTG.....................................................231845.0084516401912314142527
.................................................................................................................................TCT--CACGGC-ATA--TCAAT-CACTT......................................................221234.00234115353112042512
.................................................................................................................................TCT--CACGGC-ATA--TCAAT-CACT.......................................................21191.00911535121125110
..................................................................................................................................CT--CACGGC-ATA--TCAAT-CACTTGCAG..................................................25176.007607402000000
..................................................................................................................................CT--CACGGC-ATA--TCAAT-CACTTGCA...................................................24175.007507311000000
.................................................................................................................................TCT--CACGGC-ATA--TCAAT-CACTTGCAGT.................................................27166.006604660149000
..................................................GTAAGTGG--------CTATGCCGCG-ACGGG.................................................................................................................................23148.004803772110000
..................................................GTAAGTGG--------CTATGCCGCG-ACGGGT................................................................................................................................24146.004603911203000
..................................................................................................................................CT--CACGGC-ATA--TCAAT-CACTTG.....................................................22143.004304300000000
..................................................................................................................................CT--CACGGC-ATA--TCAAT-CACTTGC....................................................23133.003302705000001
.................................................................................................................................TCT--CACGGC-ATA--TCAAT-CACTTGCAC..................................................26114.00140535010000
.................................................................................................................................TCT--CACGGC-ATA--TCAAT-CACTTGCAA..................................................26114.001401200110000
...................................................................................................................................T--CACGGC-ATA--TCAAT-CACTTGCAG..................................................24113.001301110000010
.................................................................................................................................TCT--CACGGC-ATA--TCAAT-CACTTGCAGTT................................................28111.001101000001000
.................................................................................................................................TCT--CACGGC-ATA--TCAAT-CACTTGT....................................................24111.00110901010000
..................................................................................................................................CT--CACGGC-ATA--TCAAT-CACTT......................................................21111.001101100000000
....................................................AAGTGG--------CTATGCCGCG-ACGGGT................................................................................................................................2219.0090800100000
..................................................................................ATTG--------A------A---C------CTCT-CAT-CTCTCACC..................................................................................2219.0090701000010
...................................................TAAGTGG--------CTATGCCGCG-ACGGGT................................................................................................................................2316.0060600000000
................................................................................................................................CTCT--CACGGC-ATA--TCAAT-CACTTGC....................................................2516.0060204000000
.................................................................................................................................TCT--CACGGC-ATA--TCAAT-CACC.......................................................2116.0060006000000
.................................................................................................................................TCT--CACGGC-ATA--TCAAT-CACTTGA....................................................2415.0050301010000
..................................................GTAAGTGG--------CTATGCCGCG-ACGGGATT..............................................................................................................................2615.0050410000000
..................................................................................................................................CT--CACGGC-ATA--TCAAT-CACTTGCAGT.................................................2615.0050500000000
.................................................................................................................................TCT--CACGGC-ATA--TCAAT-CACTTGCAGC.................................................2714.0040031000000
................................................................................................................................CTCT--CACGGC-ATA--TCAAT-CACTTGCAG..................................................2714.0040400000000
..................................................GTAAGTGG--------CTATGCCGCG-ACGGGATTG--------.....................................................................................................................2714.0040210001000
...................................................................................................................................T--CACGGC-ATA--TCAAT-CACTTGCA...................................................2314.0040101200000
..................................................GTAAGTGG--------CTATGCCGCG-ACG...................................................................................................................................2114.0040400000000
...................................................................................................................................T--CACGGC-ATA--TCAAT-CACTTG.....................................................2114.0040300000010
.......................................................................................................................................ACGGC-ATA--TCAAT-CACTTGCA...................................................2113.0030300000000
.................................................................................................................................TCT--CACGGC-ATA--TCAAT-CACTTGCAGA.................................................2713.0030300000000
.................................................................................................................................TCT--CACGGC-ATA--TCAAT-CACTTGCG...................................................2513.0030102000000
.................................................................................................................................TCT--CACGGC-ATA--TCAAT-CACTTGCAGTTT...............................................2913.0030210000000
..................................................................................................................................CT--CACGGC-ATA--TCAAT-CACT.......................................................2013.0030300000000
..................................................GTAAGTGG--------CTATGCCGCG-ACGGGA................................................................................................................................2413.0030300000000
.................................................................................................................................TCT--CACGGC-ATA--TCAAT-C..........................................................1813.0030300000000
.................................................................................................................................TCT--CACGGC-ATA--TCAAT-CACTTT.....................................................2313.0030201000000
..................................................GTAAGTGG--------CTATGCCGCG-ACGGGG................................................................................................................................2413.0030000300000
.................................................................................................................................TCT--CACGGC-ATA--TCAAT-CAC........................................................2013.0030201000000
.......................................................................................................................................ACGGC-ATA--TCAAT-CACTTG.....................................................1912.0020200000000
..................................................GTAAGTGG--------CTATGCCGCG-AC....................................................................................................................................2012.0020200000000
......................................................................................................................................CACGGC-ATA--TCAAT-CACTTGCAG..................................................2312.0020200000000
.................................................................................................................................TCT--CACGGC-ATA--TCAAT-CACTTGCAAA.................................................2712.0020000000020
...................................................................................................................................T--CACGGC-ATA--TCAAT-CACTTGC....................................................2212.0020200000000
......................................................GTGG--------CTATGCCGCG-ACGGGATT..............................................................................................................................2212.0020200000000
................................................................................................................................CTCT--CACGGC-ATA--TCAAT-CACTT......................................................2312.0020200000000
..................................................GTAAGTGG--------CTATGCCGCG-ACGG..................................................................................................................................2212.0020200000000
..................................................GTAAGTGG--------CTATGCCGCG-ACGGGC................................................................................................................................2412.0020011000000
..................................................................................................................................CT--CACGGC-ATA--TCAAT-CACTTGA....................................................2312.0020200000000
..................GCTTCATCTATCCGTGCACGT............................................................................................................................................................................2112.0020200000000
..................................................................................................................................CT--CACGGC-ATA--TCAAT-CACTTGCAGTTT...............................................2812.0020200000000
..................................................................................................................................................................ACATCACCGCCGAGAAGGAGA............................2112.0020200000000
..................................................................................................................................CT--CACGGC-ATA--TCAAT-CACTTGCAGTT................................................2712.0020200000000
...............................................................................................................................................................................GAAGGAGAAGCAGCTCAAGGA...............2112.0020100001000
.................................................................................................................................TCT--CACGGC-ATA--TCAAT-CACTTGCAT..................................................2612.0020200000000
...................................................................................................................................................................CATCACCGCCGAGAAGGAGAAGC.........................2312.0020200000000
..........................................................................................................................................GC-ATA--TCAAT-CACTTGCAG..................................................1911.0010100000000
......................................................................................................................................CACGGC-ATA--TCAAT-CACTTGC....................................................2111.0010100000000
...................................................................................................................................T--CACGGC-ATA--TCAAT-CACTTGCAGT.................................................2511.0010001000000
..................................................GTAAGTGG--------CTATGCCGCG-A.....................................................................................................................................1911.0010100000000
..................................................................................ATTG--------A------A---C------CTCT-CAT-CTCTCA....................................................................................2011.0010100000000
..................................................GTAAGTGG--------CTATGCCGCG-ACTT..................................................................................................................................2211.0010100000000
.................................................................................................................................TCT--CACGGC-ATA--TCAAT-CACTTGCC...................................................2511.0010000010000
................................TGCACGTACATCACAAAGT................................................................................................................................................................1911.0010100000000
....................................................................ATGCCGCG-ACGGGATTG--------A------A---C------CT.................................................................................................2211.0010100000000
..............................................................................................A------A---C------CTCT-CAT-CTCTCACCTCT--.............................................................................2111.0010100000000
................................................................................................................................................................GTACATCACCGCCGAGAAGGA..............................2111.0010100000000
..................................................................................................................................................................ACATCACCGCCGAGAAGGAGAAGC.........................2411.0010100000000
...................................................TAAGTGG--------CTATGCCGCG-ACGG..................................................................................................................................2111.0010100000000
..................................................................................................................................................................................GGAGAAGCAGCTCAAGGAGGT............2111.0010100000000
........................TCTATCCGTGCACGTACATCACA....................................................................................................................................................................2311.0010100000000
......................................................................................................................................CACGGC-ATA--TCAAT-CACTTGCA...................................................2211.0010100000000
.........................CTATCCGTGCACGTACATCACA....................................................................................................................................................................2211.0010100000000
..................................................................................................................................................................................GGAGAAGCAGCTCAAGGA...............1821.0020200000000
......................................................................................................................................................................CACCGCCGAGAAGGAGAAGCAGCTC....................2511.0010001000000
.....................................................................................................................CAT-CTCTCACCTCT--CACGGC-ATA--T................................................................2411.0010100000000
................................................................................................................................CTCT--CACGGC-ATA--TCAAT-CACT.......................................................2211.0010001000000
...................................................TAAGTGG--------CTATGCCGCG-ACGGGA................................................................................................................................2311.0010100000000
.......................ATCTATCCGTGCACGTACATCACAAAGT................................................................................................................................................................2811.0010100000000
...........................................................................................................................................................................................GCTCAAGGAGGTAATGAAGAT...2111.0010100000000
.....................................................................................................................................................................................GAAGCAGCTCAAGGAGGTAAT.........2111.0010100000000
....................................................................................................................................................................ATCACCGCCGAGAAGGAGAAGCAGCTC....................2711.0010000010000
...............................................AAGGTAAGTGG--------CTATGCCGCG-ACGGG.................................................................................................................................2611.0010100000000
..................................................GTAAGTGG--------CTATGCCGCG-ACGGT.................................................................................................................................2311.0010100000000
....................................................AAGTGG--------CTATGCCGCG-ACGGGA................................................................................................................................2211.0010000100000
...............................................................................................................................................................................GAAGGAGAAGCAGCTCAAGGAGG.............2311.0010100000000
...............................................................................................................................................................................GAAGGAGAAGCAGCTCAAGGAG..............2211.0010100000000
.................................................................................................................................TCT--CACGGC-ATA--TCAAT-CACTTGG....................................................2411.0010100000000
...............................................................................................................................................................AGTACATCACCGCCGAGAAGGAGAAGC.........................2711.0010100000000
...........................................................................................................................................................................CCGAGAAGGAGAAGCAGCTC....................2011.0010100000000
.................................................................................................................................TCT--CACGGC-ATA--TCAAT-CACTTCA....................................................2411.0010001000000
.................................................................................................................................TCT--CACGGC-ATA--TCAAT-CACTTGCT...................................................2511.0010001000000
.................................................................................................................................TCT--CACGGC-ATA--TCAAT-CACTA......................................................2211.0010100000000
......................................................................................................................................CACGGC-ATA--TCAAT-CACTTG.....................................................2011.0010100000000
........ATCCTCCTCAGCTTCATCT........................................................................................................................................................................................1911.0010100000000
..................................................................................................................................................................ACATCACCGCCGAGAAGGA..............................1911.0010100000000
..................................................................................................................................................................ACATCACCGCCGAGAAGGAGAAG..........................2311.0010100000000
......................................................GTGG--------CTATGCCGCG-ACGGGT................................................................................................................................2011.0010100000000
.....................................................AGTGG--------CTATGCCGCG-ACGGGAT...............................................................................................................................2211.0010100000000
..........................................................................................................................................................................................AGCTCAAGGAGGTAATGAAG.....2011.0010100000000
.......................................................................................................................................ACGGC-ATA--TCAAT-CACTTGCAG..................................................2211.0010000100000
................................................................................................................................CTCT--CACGGC-ATA--TCAAT-CACTTGCAGTT................................................2911.0010100000000
.................................................................................................................................TCT--CACGGC-ATA--TCAAT-CACA.......................................................2111.0010100000000
............................................................................................................................TCACCTCT--CACGGC-ATA--TC...............................................................1911.0010100000000
..................................................................................................................................................................ACATCACCGCCGAGAAGGAGAA...........................2211.0010100000000
....................................................................................................................................................................ATCACCGCCGAGAAGGAGAAGC.........................2211.0010100000000
.................................................................................................................................TCT--CACGGC-ATA--TCAAT-CACTTA.....................................................2311.0010000000010
........................................................................................................................................CGGC-ATA--TCAAT-CACTTGC....................................................1911.0011000000000
...................................................................TATGCCGCG-ACGGGATTG--------A------A---C------C..................................................................................................2211.0010100000000
................................................................................................................................CTCT--CACGGC-ATA--TCAAT-CACTTGCC...................................................2611.0010001000000
.................................................................................................................................TCT--CACGGC-ATA--TCAAT-CACTC......................................................2211.0010001000000
................................................................................................................................................................................AAGGAGAAGCAGCTCAAGGAG..............2111.0010100000000
.....................................................AGTGG--------CTATGCCGCG-ACGGGT................................................................................................................................2111.0010100000000
........................................................GG--------CTATGCCGCG-ACGGGATTG--------.....................................................................................................................2111.0010100000000
...................................................TAAGTGG--------CTATGCCGCG-ACGGGATT..............................................................................................................................2511.0010100000000
..............................CGTGCACGTACATCACAAAGT................................................................................................................................................................2111.0010100000000
...................................................................................................................................T--CACGGC-ATA--TCAAT-CACTTGCAT..................................................2411.0010100000000
................................................................................................................................CTCT--CACGGC-ATA--TCAAT-CACTTGCA...................................................2611.0010100000000
droWil2
C----------------------------------------------------------------------------------------------------------------------------------------------------------TTACAGTACATTACATCGGAGAAGGAGAAACAACTGAAGGAGGTGATGAAAATAATSizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
.....................................................................................................................................................................TTACATCGGAGAAGGAGA............................1811.00100010
...................................................................................................................................................................CATTACATCGGAGAAGGA..............................1811.00100010
......................................................................................................................................................................TACATCGGAGAAGGAGAA...........................1811.00101000
................................................................................................................................................................GTACATTACATCGGAGAAGGA..............................2111.00100100
..................................................................................................................................................................ACATTACATCGGAGAAGGAGAAAC.........................2411.00100010
.........................................................................................................................................................................................CAACTGAAGGAGGTGATGA.......1911.00100010
......................................................................................................................................................................................AAACAACTGAAGGAGGTGAT.........2011.00100010
.................................................................................................................................................................................AGGAGAAACAACTGAAGGAGGT............2211.00100010
........................................................................................................................................................................................ACAACTGAAGGAGGTGATGAAAATAAT2711.00100100
......................................................................................................................................................................TACATCGGAGAAGGAGAAA..........................1911.00100010
................................................................................................................................................................GTACATTACATCGGAGAAGGAGAA...........................2411.00100100
.....................................................................................................................................................................................GAAACAACTGAAGGAGGTGA..........2011.00100010
droVir3
C-------------------------------------------------------------------------------------------------------------------------------TTCT--CACGAC-ATCCCTTAAT-CCCTTGCAGTACGTTGCCAACGAAAAGGAATTGCAACTGAAGGAGGTCATGAAAATAATSizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
...................................................................................................................................T--CACGAC-ATCCCTTAAT-CCCTTGCAG..................................................2611.0010000000000000000000000000000010000000000000000000000000000000000000000000000000
....................................................................................................................................................................................AATTGCAACTGAAGGAGGTC...........2011.0010000000000000000000000000000000000000000000000000000000000000000000001000000000
....................................................................................................................................................................GTTGCCAACGAAAAGGAATTGCAA.......................2411.0010000000100000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................ATTGCAACTGAAGGAGGTC...........1911.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................AAAGGAATTGCAACTGAAGGAG..............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................................................................................................................GAAAAGGAATTGCAACTGAAGGA...............2311.0010000000000000000000000000000000000000000000000000000000000000100000000000000000
....................................................................................................................................................................................AATTGCAACTGAAGGAGGT............1911.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................GTACGTTGCCAACGAAAAGGAATTGC.........................2611.0010000000000000001000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................GTTGCCAACGAAAAGGAA.............................1811.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
droMoj3
CCCTAATTATTCTGCTAAGTTTCATCTATCCGTGCACATGCATAACCAGGGTAAGTAA--------CT-----------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
............TGCTAAGTTTCATCTATCCGT..................................................................................................................................................................................2111.001100000
.........................CTATCCGTGCACATGCATA.......................................................................................................................................................................1911.001100000
droGri2
CATTGATAATACTGCTGAGCTTCATCTATCCCTGTACCTACATTACTAAGGTATGTT--------------CGA------TGATTT--------TGGTTTTTTTTGGCT---T----T--ACTTTCACCGTTTACACGACAATT--TCATC-CTTTTGCAGTACGTGACCAGTGAGAAGGAGAAGCAGCTGAAGGAGGTGATGAAAATAATSizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
....................TTCATCTATCCCTGTACCTA...........................................................................................................................................................................2011.00110
droAna3
CGTTCATTATTATGCTGAGCTTTATATATCCTAGCACCGTGGTCGCCAGAG---------------------------------------------------------------------------------------------------------------CCGTAACCAACGAAAAGGAGCTGCAGTTGAAGGAGATCATGAAGCTAATSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
No Reads
droBip1
CGCTGATCATACTGCTCAGTTTCATATATCCCTGCACGTATATAACAAAGGTGAGAGGGACGAGGTCTATA----------------------------GCTTTCGGGTTGTG----T--A------ATACT--TTAAAT-ATT--TTATTCCAATTTCAGTATATAACCGCCGAAAAGGAAAAACAACTGAAGGAAGTCATGAAGATCATSizeHit CountTotal NormTotal
No Reads
droKik1
CACTGATCATCTTGCTGAGCTTCATCTATCCGTGCACGTACATCACCAAGGTAAGTCT--------C-----CGAGAACGGGAACGAATCGCACAGATCCATATCT------G----T--ATC----------------T-GTA--TCCTT-CTTGTGTAGTACATCACCGCCGAGAAGGAGAAGCAGCTCAAGGAGGTGATGAAGATCATSizeHit CountTotal NormTotal
No Reads
droFic1
CGTTGATTATACTGCTCAGCTTCATTTATCCCTGCACGTACATCACCAAGGTAAGTTT--------ATATTTATTT-GTGTTGGT---------------------------G----T--ACCTCCTCCACT--CACAAC-ATT--TCATT-CACCTGCAGTTCATTACCGCCGAGAAGGAGAAGCAGCTCAAGGAGGTGATGAAGATCATSizeHit CountTotal NormTotal
No Reads
droEle1
CGCTAATCATACTGCTGAGCTTCATCTATCCGTGCACGTACATCACCAAGGTAAGTGG--------GTATGCCG------GGACTG--------TGGTTCTAAATG------C----C--ATCACCACCACT--CACGGC-ATT--TCATT-CACTTGCAGTACATCACCGCCGAGAAGGAGAAACAGCTCAAGGAGGTGATGAAGATCATSizeHit CountTotal NormTotal
No Reads
droRho1
CGCTGATCATACTGCTGAGCTTCATCTATCCCTGCACGTACATCACCAAGGTAAGTGG--------GTATGCCG------GGATTG--------TGGTTAAT----------A----C--ACCTCCTCCACT--CACGGC-ATT--TCATT-CACTTGCAGTACATCACCGCCGAGAAGGAGAAACAGCTGAAGGAGGTGATGAAGATCATSizeHit CountTotal NormTotal
No Reads
droBia1
CGCTGATCATACTGCTCAGCTTCATCTACCCCTGCACGTACATCACCAAAGTAAGTGG--------CCATGCCG------GGATTG--------TGGTTTAA---C------CAGA-GGTTCCTCCTCCACT--CACGGC-ATT--TCATT-CACTTGCAGTACATCACCGCCGAGAAGGAGAAACAGCTCAAGGAGGTGATGAAGATCATSizeHit CountTotal NormTotal
No Reads
droTak1
CGCTGATCATACTGCTGAGCTTCATCTATCCCTGCACGTACATCACCAAGGTAAGTGG--------CTATGCCG------GGATTG--------TGGTTTACAATA--------GAAAG-ATCCCCTCCACT--CACGGC-ATT--TCATT-CACTTGCAGTACATCACCGCCGAGAAGGAGAAGCAGCTGAAGGAGGTGATGAAGATCATSizeHit CountTotal NormTotal
No Reads
droEug1
CGCTGATCATACTGTTGAGCTTCATCTATCCATGCACGTATATCACCAAGGTAAGTGG--------CTATGCCG------GGATCG--------TGGTTGATCTAT------G----T--ACCTTCTCCACT--CACGGC-ATT--TCATT-CACTTGTAGTACATCACCGCTGAAAAGGAGAAGCAGCTCAAGGAGGTAATGAAGATCATSizeHit CountTotal NormTotal
No Reads
dm3
CGCTGATCATACTGTTGAGCTTCATTTATCCCTGCACGTACATCACTAAGGTAAGTGA--------CTATGCCG------GGATTG--------TGGTTATTGAAC------T----T--AGCGTCTCCACT--CACGGC-ATT--TCATT-CACTTGCAGTACATCACCGCCGAGAAGGAGAAACAGCTGAAGGAGGTGATGAAGATCATSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTT......................................................2211462.00146200000000000000000100000000102223280310000002000102111010009320000000000000000067551003000000040310200004270212010010000018604040704098000000000001100020006000000000300000821320641050302242925157400010174424100010130000001000000001010001010011200240000000147020021130100023002000210510310635213643217020201513193900000000020011090045020002100021600021028560
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTGCAG..................................................2611149.00114900001000000000000000000000003348430101112202200001300210003134400000000000000000115662000001000220130200211606100000010000100002050100200000000000100000011150100000000000002318011004513573170262000002020540000093000000000000000002048122235108894100208000030014001002102130230001000121232203292942607121002031440001003214011543124303000140001500011112230
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTGCA...................................................251915.0091500001000000001200000100000003000000200200000030000120000252580000000000000000071813222300101100010240200011150717000010000012000003000010000000000010000200215000000000000000132008008410393703700000026104000000200000000000000301320122101410452230018110000002101020101223052622001100204501008010503051103312730014100000001363020103100221000800000011000
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACT.......................................................211825.0082500001000000000100000000200001014111000010000100010100100000120000000000000000004421008000010200000400017036500000000002052102130302210000000000110001010300000000000010035610220020120141511590000109020200000010000000000000030000000101000010080000000264020128452002112011120080411111173163412412200191372200001002000010010018121000010011901014046580
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTGC....................................................241696.006960000000000000020020000000000100000000110001000000001000029451200000000000000000182492100100000001101700000190500000000000000000000000000000000000010001000070000110002020050303001809210120034003000000000100000000000000031010024112031105400023300001000000100010242062100000000003010001000300020000201430101101000001214010000100020000210000003010
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------TGG..................................................................................................................251605.006050000000000000000000000000000000000000100000000000001000000000000000000000000000000001010000000300000020000000000000000000000000001000000000000000000010000000000000001001000000010200000000012000000000000000000001001121400225451004000000000100100101031100100010110030000406170311010032292211009111100024347309126060641801007213151250146122170
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTGCAGT.................................................271486.00486000000000000000000000000000000000000000000220250102200008600000000000000000000020000000000000000000010000000000000000000000000000000000000010000010017000000000000000430000030100012000000304200000400000000000000000291301020000200110000210626220323720022021141100402214101153117382141120043335213200512513205127212129007241001740401061116200
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTG.....................................................231458.00458000000000000001000000000000001106010000000010100000000000363414000000000000000001312581000001010000020000013100021000000000000000020000000000000000000000001110000000005000702401100611306019001010800000000000000000000000010000001164210212107500000000000000000112002010000001102100000000100130004201700000000000000013000120000000000410100000000
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------.....................................................................................................................221395.0039500000000000000000000000000001000001000000000000000000000000000000000000000000000010000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000000010000000000000000000018300021000111120000000000001000000019100000000703020110002110501200200010120100000021121001422722722401612003200111113140
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------TG...................................................................................................................241251.002510000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000001001001000000000000000000000000000000000000000010000000000000004803110001020010000000010100111000110910000100061100000000001241120080000011001001100091001315604374015312070000200161290
...................................................................................................................................T--CACGGC-ATT--TCATT-CACTTGCAGT.................................................251182.001820000000000010000000000000000000000001000001000002010000000000000000000000000020000000010000000010000000001000010000000000000000000000000000001000000040000000000000000000001000001000000004041000701000000000000008021200000000000005000031000011000301003201105020012314320000011004460010100000000200110020011612900290000100101054480
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------T....................................................................................................................231136.00136000000000000000000000000000000000000010000000100000000001000000000000000000000000000000000000010000000001021000000000000000000000000000000000000100000000300000000000110000000000000000000000000010200000000004000200001310131220000000000000100100000000011001100000021000000006120014002101220011000020210111433650372102700005072010
..................................................................................................................................CT--CACGGC-ATT--TCATT-CACTTGCAGT.................................................26186.00860000000000000000000000000000000000001000000000000000000010000000000000000000000000000000001000000000000000000000000000000000000010000000000000000000010000000000000000000000000000000000002120000102000000000000000201400100101001003000000020002000000000101002000010120000000210102010100211001001100000020001115001111101000000001510
..................................................GTAAGTGA--------CTATGCCG------GGATT..............................................................................................................................21183.0083000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000100000000000001000000000000000001000000000000000000000000000000000000000000000000000000000000000000001002120111000100000000000000000000110000100001040100010001100420001101010200001010111000202690242100010000040250
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTGCAA..................................................26167.0067000000000000000000000000000000000000100000000101000000000000000000000000000000110000000000000020000000000000000000000000000000000000000000000000001000000000000000000200200110101060000000001000000000000001000000000000001111020300600000000000000000000000000000000000000033618010000010010000000000000002000000000000000000002000000
...................................................TAAGTGA--------CTATGCCG------GGATTG--------T....................................................................................................................22154.0054000000000000000000000000000000000001000000000000000000000000000000000000000000100000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000100000200000000000200000000000100000001000000010000020000000000000100001000201002143000900001210001023140
...................................................TAAGTGA--------CTATGCCG------GGATTG--------TGG..................................................................................................................24151.005100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001010000000000000000000010000000000000000000000000000100000000000000000000000001070030010201011000000113420
...................................................................................................................................T--CACGGC-ATT--TCATT-CACTTGCA...................................................23150.0050000000000100000000000000000000000000000000000000000000000010000000000000000020000000001000010010000003000100000000000001000100001000000000000000000000000000000000000120200230104030000007001000000000000000000000000000000000000100000000000010000010000000010000001001000000010001000000000000000000000000000000000000000000000010010
...................................................................................................................................T--CACGGC-ATT--TCATT-CACTTGCAG..................................................24145.0045000000000000001000000000000000000000000000000000000000000200000000000000000023111000000000000010000005020030000000001000000100000000000000000000000001000000000000000000200020000000000000001000000000000000000000002000000100000100100000000000000000000001000001001002001000000000000000000000000000000000000100000000000000000020100
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------TGGT.................................................................................................................26140.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000011001420001000000000000000000000000000000000000000000000000000000000010000003000110002104310401101000003011000
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTGATC..................................................26139.003900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002811000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CA.........................................................19139.0039000000000000000000000000000010000000001000000000000000001000000000000000000020200000000000000000000000000000000000000020010000000000000000000000000000000000000000000110000100012155000003000000000000000000000000000000000000000000000000000000000200000000000000001000000000000000000011040000000000000000000000000000000000000000000
..................................................................................................................................CT--CACGGC-ATT--TCATT-CACTTGCA...................................................24136.0036000000000000000000000000000000000000000000000000000000001000000000000000000000011000000000000010000000000000000000001000000100000000000000000000000003000000000000000020000000100050000001000000000000000000000000000000101000000200400000000000000010100000000000000001100000000000000000010000000000000011000000000000000100010010000
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTGCAGA.................................................27136.0036000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000120000030003040000001020000000000000000000000000000000003001400101000000000000000000010000000000000000010101010000010000000000000001000000000100001000000000000000
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTGCATC.................................................27133.003300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002013000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................T--CACGGC-ATT--TCATT-CACTTGC....................................................22131.0031000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000010000000000000000000500000000000000000000000000000000000000000000000000100100100001000000002000000000000000000000000001000101000000000000000000000000000100010100000000010000000000000000000020000000000000000000400000000000000000023000
.................................................................................................TTATTGAAC------T----T--AGCGTCTCC..................................................................................20130.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000010000000000000000000000000000000100000000000000000300200010000005000000000000000000000000000000000000000000100001000000000000000000100010000000000000000000000000100001000000010010001100000111000100000000000001000
...................................................TAAGTGA--------CTATGCCG------GGATTG--------.....................................................................................................................21125.0025000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110002000000000000000000000000100000000000000000100000000000000001100000000001100000000021610000000110000002000
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------TGGTT................................................................................................................27123.0023000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010000000000000000100000000000000000000000000000000000000100000000000000000000001000000000000000000000000000000000000000000000000200002100130003010310000010
..................................................GTAAGTGA--------CTATGCCG------GGA................................................................................................................................19123.0023000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000001000000000100100000010000000001000000000000011000100000001000000000000000001000000000100100010000000000010011010000000011010
..................................................GTAAGTGA--------CTATGCCG------GGAT...............................................................................................................................20122.0022000000000000000000000000000000000040000000000000000000000000000000000000000000000000301000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000001000000000000100000000000001000000000000000010000101110001000100000001200
..................................................................................................................................CT--CACGGC-ATT--TCATT-CACTTGCAG..................................................25119.0019000000000000000000000000000000000000000000000000000000001000000000000000000011010000000100000010200000000000000000000000000000000000000000000000000000000000000000000200100010010010000000000000000000000000000000000000000000000300100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTGA....................................................24117.0017000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000120200000001040000000000000000000000000000000000000001000000000110000001000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------TGT..................................................................................................................25117.0017000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000002000000000000000100000000000000000000010000000000000000000000000001000011000000001000000001000100230000100000000000
...................................................TAAGTGA--------CTATGCCG------GGATTG--------TG...................................................................................................................23116.0016000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000100000000000100000000000000000000000000000000000000002000001010110200000000000000000200
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CAC........................................................20116.0016000000000000000000000000000000000000000000000000000000000100000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000120000120000030000001000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000010000000000000000000000000000000000000000000
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTGT....................................................24114.0014000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000200000000000000000000000000000000010000020000000010000011000000000000000000000000100000000010000110
..................................................................................................................................CT--CACGGC-ATT--TCATT-CACTT......................................................21111.0011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000330100000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000000000000000000000000100
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTA.....................................................23110.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000010014000000000000000000000000100000000000000000000000010000
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTGCAGTA................................................28110.0010000000000000000000000000000000000000000000000000000000002600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................T--CACGGC-ATT--TCATT-CACTT......................................................20110.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000080000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................CT--CACGGC-ATT--TCATT-CACTTGC....................................................23110.0010000000000000000000000000000000000000000000000000000000000100000000000000000010100000000000000000000000000000000000000000000000010000000000000000000000000000000000000010000100000000000001000000000000000000000000000000000000000100100000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------TGGA.................................................................................................................2619.009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000010000000000000000000000000000000000100000001000000000000000000000000110101000000010000
.................................................................................................................................ACT--CACGGC-ATT--TCATT-C..........................................................1819.009000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
.....................................................................................................TGAAC------T----T--AGCGTCTCCACT--CACGGC-A.....................................................................2618.008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000020000000010100001000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000001000
..................................................................................................................................CT--CACGGC-ATT--TCATT-CACTTG.....................................................2218.008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000102000000000000000000000000000000000000000100200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................TATTGAAC------T----T--AGCGTCTCCACT--CACG.........................................................................2617.007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000001000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000001000000000
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTGCAT..................................................2617.007000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000010000000000000000100000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
...................................................................................................................................T--CACGGC-ATT--TCATT-CACTTG.....................................................2117.007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000010001000000000000000000000000000000000000000000000000000000000000000100000000000
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTT.....................................................2317.007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000002000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTG......................................................2217.007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000002030000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTGCAGTT................................................2817.007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000400000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTGCAAA.................................................2716.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000301000000000000000000000000000000000000000000000000000000
....................................................................................................TTGAAC------T----T--AGCGTCTCCACT--CACGGC-A.....................................................................2716.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000001001000000000000100000000
..................................................................................................TATTGAAC------T----T--AGCGTCTCCACT--CACGG........................................................................2716.006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000020000000010000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
...................................................TAAGTGA--------CTATGCCG------GGATTG--------TGGT.................................................................................................................2515.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100200000000001000000
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTC......................................................2215.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTGCT...................................................2515.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000000000000000000000000000000000001000000000000000000000000000
...................................................TAAGTGA--------CTATGCCG------GGATTG--------TAA..................................................................................................................2415.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000010000000010000000000000000
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTGCAGC.................................................2715.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000100
...........................................................................................................................................C-ATT--TCATT-CACTTGCAGT.................................................1915.005000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..................................................GTAAGTGA--------CTATGCCG------GG.................................................................................................................................1815.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000001000000000000000000000000000000000000000000000000000000100100000000000000000000
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTGCAC..................................................2615.005000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000010000000000000000010000000000000000000000000000000000000000000000000000000000
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------A....................................................................................................................2315.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000001000000000000000000000000000000000000000000000010000100
....................................................AAGTGA--------CTATGCCG------GGATTG--------TGG..................................................................................................................2315.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000110000000000001100
......................................................................................................................................CACGGC-ATT--TCATT-CACTTGCAG..................................................2314.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000001000000000000000000000000000
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTGCAGG.................................................2714.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000010010000000000000000000000000000000000000000000000
......................................................GTGA--------CTATGCCG------GGATTG--------TG...................................................................................................................2014.004000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000001000000010000
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------TGA..................................................................................................................2514.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000010000
.....................................................AGTGA--------CTATGCCG------GGATTG--------TGG..................................................................................................................2214.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000
.....................................................................................................................................................................TCACCGCCGAGAAGGAGAAACAG.......................2314.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................TTGAAC------T----T--AGCGTCTCCACT--CACGGC-......................................................................2614.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
....................................................AAGTGA--------CTATGCCG------GGATTG--------TG...................................................................................................................2214.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000100000000000000000000000000000100000100000000
.....................................................................................................................T--AGCGTCTCCACT--CACGGC-ATT--TCAT.............................................................2614.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................T--CACGGC-ATT--TCATT-CACTTGCAGA.................................................2514.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000100000000000000000000010000000000000000000000000000000000000000000000100
..................................................................................................................................CT--CACGGC-ATT--TCATT-CACT.......................................................2013.003000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000001000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................C-ATT--TCATT-CACTTGCAGTT................................................2013.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................CT--CACGGC-ATT--TCATT-CACTTGCAGA.................................................2613.003000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTGCG...................................................2513.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000100000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................TATTGAAC------T----T--AGCGTCTCCACT--CACGGC-A.....................................................................2913.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................G--------TGGTTATTGAAC------T----T--AGCGTCTCCA.................................................................................2513.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
...................................................................................................................................T--CACGGC-ATT--TCATT-CACTTGCATC.................................................2513.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................ATT--TCATT-CACTTGCAGT.................................................1813.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000100000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
........................................................GA--------CTATGCCG------GGATTG--------TGGTT................................................................................................................2113.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000100000000000000000000010000000
...................................................................TATGCCG------GGATTG--------TGGTTATTG............................................................................................................2213.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101010000000
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACG.......................................................2113.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000100000000000000000000000000000000000000000000
..................................................................CTATGCCG------GGATTG--------TGGTTATT.............................................................................................................2212.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000
......................................................................................................................................CACGGC-ATT--TCATT-CACTTGCAGT.................................................2412.002000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................TAAGTGA--------CTATGCCG------GGATTG--------TGGA.................................................................................................................2512.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000100
........................................................GA--------CTATGCCG------GGATTG--------TGG..................................................................................................................1912.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
......................................................GTGA--------CTATGCCG------GGATTG--------TGGT.................................................................................................................2212.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTGG....................................................2412.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.GCTGATCATACTGTTGAGCTT.............................................................................................................................................................................................2112.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CGCTGATCATACTGCTGAGCTTCATTTATCCCTGCACGTACATCACCAAGGTAAGTGA--------CTATGCCG------GGATTG--------TGGTTATTATAC------T----T--AGCGTCTCCACT--CACGGC-ATT--TCATT-CACTTGCAGTACATCACCGCCGAGAAGGAGAAACAGCTGAAGGAGGTGATGAAGATCATSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTG.....................................................231423.0042329439252768100000023000
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTT......................................................221326.0032679521722136898443524000
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACT.......................................................211325.00325732342064445230214323000
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CAC........................................................201163.00163101002412710000000000
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTGCAG..................................................261140.00140345915134803000229000
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTGC....................................................241134.00134295010127800000000000
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTGCA...................................................25173.007322631351601100302010
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CA.........................................................19166.00660000105500000001000
.................................................................................................................................ACT--CACGGC-ATT--TCATT-C..........................................................18160.0060101094900000000000
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------TGG..................................................................................................................25141.0041641810002000109000
..................................................GTAAGTGA--------CTATGCCG------GGAT...............................................................................................................................20132.0032246100001000000000
..................................................GTAAGTGA--------CTATGCCG------GGATT..............................................................................................................................21129.0029187300010000000000
..................................................GTAAGTGA--------CTATGCCG------GGA................................................................................................................................19115.001581301100000100000
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTGCAGT.................................................27111.001110200010000502000
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTGCAA..................................................2619.00900030031020000000
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------T....................................................................................................................2319.00921102000000003000
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTGCAGA.................................................2717.00700000013300000000
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------.....................................................................................................................2217.00720200000100002000
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTGCAGTA................................................2816.00600001500000000000
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACC.......................................................2116.00651000000000000000
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTGA....................................................2415.00502000001000002000
...................................................TAAGTGA--------CTATGCCG------GGATTG--------.....................................................................................................................2115.00510000001110010000
...................................................................................................................................T--CACGGC-ATT--TCATT-CACTTGC....................................................2214.00420000100000001000
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTGCAAA.................................................2714.00400000020110000000
..................................................................................................................................CT--CACGGC-ATT--TCATT-CACTTG.....................................................2214.00420010000000001000
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------TGGTT................................................................................................................2713.00302100000000000000
...................................................TAAGTGA--------CTATGCCG------GGATTG--------T....................................................................................................................2213.00312000000000000000
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------TG...................................................................................................................2413.00310100000000100000
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACG.......................................................2112.00220000000000000000
.....................................................................................................................................................................................GAAACAGCTGAAGGAGGTG...........1912.00200200000000000000
..................................................................................................................................CT--CACGGC-ATT--TCATT-CAC........................................................1912.00200000200000000000
...................................................................................................................................T--CACGGC-ATT--TCATT-CACTTGCAG..................................................2412.00200001100000000000
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------TGT..................................................................................................................2512.00200200000000000000
.................................................................................................TTATTATAC------T----T--AGCGTCTCC..................................................................................2012.00220000000000000000
..................................................................................................................................CT--CACGGC-ATT--TCATT-CACTTGCAGT.................................................2612.00200110000000000000
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTGT....................................................2412.00201100000000000000
CGCTGATCATACTGCTGAGC...............................................................................................................................................................................................2012.00200110000000000000
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------TGGT.................................................................................................................2612.00200100000001000000
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTGCAC..................................................2612.00210010000000000000
..................................................................................................................................CT--CACGGC-ATT--TCATT-CACTTGCA...................................................2411.00100000100000000000
.............GCTGAGCTTCATTTATCCC...................................................................................................................................................................................1911.00100100000000000000
..................................................GTAAGTGA--------CTATGCCG------GGATTT--------.....................................................................................................................2211.00101000000000000000
..................................................GTAAGTGA--------CTATGCCG------GGATG..............................................................................................................................2111.00101000000000000000
........ATACTGCTGAGCTTCATTTATCCCG..................................................................................................................................................................................2511.00100100000000000000
...................................................................................................................................T--CACGGC-ATT--TCATT-CACTTG.....................................................2111.00110000000000000000
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------TGGAA................................................................................................................2711.00100100000000000000
......................................................................................................................................CACGGC-ATT--TCATT-CACTTGCAG..................................................2311.00110000000000000000
................................................................................................................................................................GTACATCACCGCCGAGAAGGAGAAAC.........................2611.00100000000000100000
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTGCAGG.................................................2711.00101000000000000000
..................................................GTAAGTGA--------CTATGCCG------...................................................................................................................................1611.00100000000001000000
...................................................................................................................................T--CACGGC-ATT--TCATT-CACT.......................................................1911.00100000100000000000
..................................................GTAAGTGA--------CTATGCCG------GGAA...............................................................................................................................2011.00100100000000000000
..................................................................................................................................................................ACATCACCGCCGAGAAGGA..............................1911.00100001000000000000
....GATCATACTGCTGAGCTT.............................................................................................................................................................................................1811.00100010000000000000
.....................................................................................................TATAC------T----T--AGCGTCTCCACT--CACGGC-G.....................................................................2611.00100000001000000000
..................................................................................................................................CT--CACGGC-ATT--TCATT-CACTTGCAG..................................................2511.00100010000000000000
.....................................................................................................................................................................................GAAACAGCTGAAGGAGGTGATGAA......2411.00100010000000000000
....................................................AAGTGA--------CTATGCCG------GGAT...............................................................................................................................1811.00101000000000000000
.....................................................................................................................T--AGCGTCTCCACT--CACGGC-ATT--TCATT-...........................................................2711.00100010000000000000
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTAA....................................................2411.00110000000000000000
...................................................................................................................................T--CACGGC-ATT--TCATT-CACTTGCA...................................................2311.00100000100000000000
...TGATCATACTGCTGAGCT..............................................................................................................................................................................................1811.00100100000000000000
..................................................................CTATGCCG------GGATTG--------TGGTT................................................................................................................1911.00100010000000000000
.....ATCATACTGCTGAGCTTCATTTATCCCT..................................................................................................................................................................................2811.00100100000000000000
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------G....................................................................................................................2311.00110000000000000000
................................................................................................................................CACT--CACGGC-ATT--TCATT-CACT.......................................................2211.00100000100000000000
...................................................................................................................................T--CACGGC-ATT--TCATT-CACTTGCAGT.................................................2511.00100000000000100000
..................................................GTAAGTGA--------CTATGCCG------GGG................................................................................................................................1911.00101000000000000000
..................................................................................................................................CT--CACGGC-ATT--TCATT-CACTTGC....................................................2311.00100000100000000000
......................................................................................................................................CACGGC-ATT--TCATT-CACTTGC....................................................2111.00100000000001000000
....................................................................................................TTATAC------T----T--AGCGTCTCCACT--CACGGC-A.....................................................................2711.00100000001000000000
.............................................................................................................................................ATT--TCATT-CACTTGCA...................................................1611.00100000000001000000
...................................................................................................................................T--CACGGC-ATT--TCATT-CAC........................................................1811.00110000000000000000
...TGATCATACTGCTGAGCTTCATTTATC.....................................................................................................................................................................................2711.00100000001000000000
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------AA...................................................................................................................2411.00100000000000010000
...................................................................................................................................T--CACGGC-ATT--TCATT-CACTT......................................................2011.00100000100000000000
.........................................................................................................C------T----T--AGCGTCTCCACT--CACGGC-......................................................................2111.00101000000000000000
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTGCAGTT................................................2811.00100010000000000000
.................................................................................................TTATTATAC------T----T--AGCGTCTCCACT--.............................................................................2311.00110000000000000000
..................................................................................................TATTATAC------T----T--AGCGTCTCCACT--CACGGC-A.....................................................................2911.00100000010000000000
..................................................................................................................................CT--CACGGC-ATT--TCATT-CACTTGCT...................................................2411.00110000000000000000
...................................................................TATGCCG------GGATTG--------TGGTTATT.............................................................................................................2111.00100000000000100000
...................................................TAAGTGA--------CTATGCCG------GGATTG--------TGG..................................................................................................................2411.00100000000000010000
..............................................................................................................................................TT--TCATT-CACTTGCAA..................................................16200.05100000000010000000
droSec2
CGCTGATCATACTGCTGAGCTTCATTTATCCCTGCACGTACATCACCAAGGTAAGTGA--------CTATGCCG------GGATTG--------TGGTTATTATAC------T----T--AGAGTCTCCACT--CACGGC-ATT--TCATT-CACTTGCAGTACATCACCGCCGAGAAGGAGAAACAGCTGAAGGAGGTGATGAAGATCATSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTG.....................................................231170.00170169001
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTGCAG..................................................261166.00166152158
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTGCA...................................................251150.00150146211
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTT......................................................221105.00105550347
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTGC....................................................24177.007776001
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACT.......................................................21171.0071241046
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTGCAGT.................................................27165.00651253018
...................................................................................................................................T--CACGGC-ATT--TCATT-CACTTGCAGT.................................................25125.002541155
..................................................................................................................................CT--CACGGC-ATT--TCATT-CACTTGCAG..................................................25117.001716001
..................................................................................................................................CT--CACGGC-ATT--TCATT-CACTTG.....................................................22116.001616000
..................................................................................................................................CT--CACGGC-ATT--TCATT-CACTTGCA...................................................24113.001312001
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------TGG..................................................................................................................25111.00110083
...................................................................................................................................T--CACGGC-ATT--TCATT-CACTTGCAG..................................................24110.00108002
..................................................................................................................................CT--CACGGC-ATT--TCATT-CACTTGC....................................................2319.0099000
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------T....................................................................................................................2317.0071312
...................................................................................................................................T--CACGGC-ATT--TCATT-CACTTGC....................................................2216.0064002
...................................................TAAGTGA--------CTATGCCG------GGATTG--------.....................................................................................................................2116.0062220
..................................................................................................................................CT--CACGGC-ATT--TCATT-CACTT......................................................2116.0066000
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTGCAA..................................................2615.0055000
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTGT....................................................2415.0055000
..................................................GTAAGTGA--------CTATGCCG------GGAT...............................................................................................................................2014.0041111
....................................................AAGTGA--------CTATGCCG------GGATTG--------TGGTT................................................................................................................2514.0040301
........................................................GA--------CTATGCCG------GGATTG--------TGGTTATT.............................................................................................................2414.0042020
..................................................................................................................................CT--CACGGC-ATT--TCATT-CACTTGCAGT.................................................2614.0042020
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------.....................................................................................................................2214.0041201
...................................................................................................................................T--CACGGC-ATT--TCATT-CACTTGCA...................................................2313.0032001
..................................................................................................................................CT--CACGGC-ATT--TCATT-CACT.......................................................2013.0033000
...................................................TAAGTGA--------CTATGCCG------GGATTG--------T....................................................................................................................2213.0030111
..................................................GTAAGTGA--------CTATGCCG------GGATT..............................................................................................................................2113.0031200
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTGCAGA.................................................2713.0032010
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CAC........................................................2013.0032001
..........................................................................................................................AGTCTCCACT--CACGGC-ATT--TCATT-C..........................................................2512.0022000
........................................................................................................AC------T----T--AGAGTCTCCACT--CAC..........................................................................1912.0022000
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------TG...................................................................................................................2412.0020020
.......................................................................................................TAC------T----T--AGAGTCTCCACT--CACGGC-A.....................................................................2412.0022000
........................................................GA--------CTATGCCG------GGATTG--------TGGTTA...............................................................................................................2212.0020020
..................................................................CTATGCCG------GGATTG--------TGGTTATTA............................................................................................................2312.0021100
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------TGGTT................................................................................................................2712.0020110
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTGA....................................................2412.0022000
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTGCAC..................................................2612.0022000
........................................................GA--------CTATGCCG------GGATTG--------TGGTT................................................................................................................2112.0020200
...................................................................................................................................T--CACGGC-ATT--TCATT-CACTTGCAGA.................................................2512.0020020
.............................................................................................................................................ATT--TCATT-CACTTGCAGT.................................................1812.0020020
................................................................................................................T----T--AGAGTCTCCACT--CACGGC-A.....................................................................2112.0022000
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTT.....................................................2312.0022000
...................................................................................................................................T--CACGGC-ATT--TCATT-CACTTG.....................................................2112.0020002
................................................................................................................................CACT--CACGGC-ATT--TCATT-CACTTG.....................................................2412.0022000
.....................................................................................................TATAC------T----T--AGAGTCTCCACT--CACGGC-A.....................................................................2611.0010010
..................................................................CTATGCCG------GGATTG--------TGGTTATT.............................................................................................................2211.0010100
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTGCACA.................................................2711.0011000
........................................................................................................................................CGGC-ATT--TCATT-CACTTGCAGTTT...............................................2411.0011000
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTGCAT..................................................2611.0010010
......................................................GTGA--------CTATGCCG------GGATTG--------TGGTT................................................................................................................2311.0010100
....................................................AAGTGA--------CTATGCCG------GGATTG--------.....................................................................................................................2011.0010100
.................................................................................................TTATTATAC------T----T--AGAGTCTCCACT--CACGGC-......................................................................2911.0011000
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTGCAGTT................................................2811.0011000
..................................................................................................................................CT--CACGGC-ATT--TCATT-CACTTGCG...................................................2411.0011000
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CA.........................................................1911.0010010
........................................................GA--------CTATGCCG------GGATTG--------TGGTTAT..............................................................................................................2311.0010100
.........................................................A--------CTATGCCG------GGATTG--------TGG..................................................................................................................1811.0011000
..................................................................................................................................CT--CACGGC-ATT--TCATT-CACTTGT....................................................2311.0010001
.......................................................TGA--------CTATGCCG------GGATTG--------TGGTTATTA............................................................................................................2611.0011000
.....................................................................................................................T--AGAGTCTCCACT--CACGGC-ATT--TCATT-...........................................................2711.0010100
....................................................AAGTGA--------CTATGCCG------GGATTG--------TGGTTAT..............................................................................................................2711.0011000
...................................................................................................................................................................................GAGAAACAGCTGAAGGAGGT............2011.0010010
...................................................TAAGTGA--------CTATGCCG------GGATTG--------TT...................................................................................................................2311.0011000
..................................................................................................................................CT--CACGGC-ATT--TCATT-CACTTGA....................................................2311.0011000
......................................................................................................................................CACGGC-ATT--TCATT-CACTTGCAGTTT...............................................2611.0011000
.....................................................................................................................................................................................GAAACAGCTGAAGGAGGT............1811.0010010
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACG.......................................................2111.0011000
.............................................................................................................................CTCCACT--CACGGC-ATT--TCATT-CACTT......................................................2611.0010010
.....................................................................................................TATAC------T----T--AGAGTCTCCACT--CACGGC-......................................................................2511.0011000
......................................................................................................................................CACGGC-ATT--TCATT-CACTTG.....................................................2011.0011000
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------TGGA.................................................................................................................2611.0011000
...................................................................................................ATTATAC------T----T--AGAGTCTCCACT--CACGGC-A.....................................................................2811.0010001
...........................................................................................................................................C-ATT--TCATT-CACTTGCAGTT................................................2011.0010100
......................................................................................................................................................................................AAACAGCTGAAGGAGGTGAT.........2011.0010010
...................................................................................................................................T--CACGGC-ATT--TCATT-CACTT......................................................2011.0010001
...................................................................TATGCCG------GGATTG--------TGGTTAT..............................................................................................................2011.0011000
......................................................................................................................................CACGGC-ATT--TCATT-CACTTGCAGT.................................................2411.0011000
......................................................GTGA--------CTATGCCG------GGATTG--------TGGTTA...............................................................................................................2411.0010100
..............CTGAGCTTCATTTATCCCTGCACGTA...........................................................................................................................................................................2611.0010010
....................................................AAGTGA--------CTATGCCG------GGATTG--------TGT..................................................................................................................2311.0010001
........................................................................................................................................CGGC-ATT--TCATT-CACTTGC....................................................1911.0011000
..................................................GTAAGTGA--------CTATGCCG------GG.................................................................................................................................1811.0010001
CGCTGATCATACTGCTGAGC...............................................................................................................................................................................................2011.0010010
..................................................GTAAGTGA--------CTATGCCG------GGATTG--------TGGT.................................................................................................................2611.0010100
........................................................................................................AC------T----T--AGAGTCTCCACT--CACGGC-......................................................................2211.0011000
.......................................................................................................................................ACGGC-ATT--TCATT-CACTTGCA...................................................2111.0011000
....................................................AAGTGA--------CTATGCCG------GGATTG--------TGGTTATT.............................................................................................................2811.0011000
......................................................................................................ATAC------T----T--AGAGTCTCCACT--CACGGC-A.....................................................................2511.0010100
.........................................................................................................C------T----T--AGAGTCTCCACT--CACGGC-A.....................................................................2211.0011000
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTA.....................................................2311.0010001
...................................................................................................ATTATAC------T----T--AGAGTCTCCACT--.............................................................................2111.0010010
..............................................................................................................................................TT--TCATT-CACTTGCAGTT................................................1840.2511000
droYak3
CGCTGATCATACTGCTGAGCTTTATTTACCCATGCACGTACATCACCAAGGTAAGTGA--------CAATGCCG------GGATTG--------TGGTTATTGAAA------A----T--ACCTTCTCCACT--CACGGC-ATT--ATATT-CACTTGCAGTACATCACCGCCGAGAAGGAGAAACAGCTCAAGGAGGTGATGAAGATCATSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
.................................................................................................................................ACT--CACGGC-ATT--ATATT-CACTTG.....................................................231210.0021016147100100000
.................................................................................................................................ACT--CACGGC-ATT--ATATT-CACTTGCA...................................................251109.001093276000010000
.................................................................................................................................ACT--CACGGC-ATT--ATATT-CACTTGCAG..................................................26187.00871261812300000
.................................................................................................................................ACT--CACGGC-ATT--ATATT-CACTTGC....................................................24182.00822947600000000
.................................................................................................................................ACT--CACGGC-ATT--ATATT-CACTT......................................................22132.00321312003400000
.................................................................................................................................ACT--CACGGC-ATT--ATATT-CACT.......................................................21127.0027168000300000
.................................................................................................................................ACT--CACGGC-ATT--ATATT-CACTTGCAGT.................................................27123.0023213232100000
..................................................GTAAGTGA--------CAATGCCG------GGATTG--------T....................................................................................................................23111.001122000070000
..................................................................................................................................CT--CACGGC-ATT--ATATT-CACTTGCAG..................................................25111.0011010001000000
..................................................GTAAGTGA--------CAATGCCG------GGATTG--------TGG..................................................................................................................25110.001071100010000
..................................................................................................................................CT--CACGGC-ATT--ATATT-CACTTGCA...................................................2417.00707000000000
..................................................GTAAGTGA--------CAATGCCG------GGATTG--------TGGTT................................................................................................................2717.00740100020000
..................................................GTAAGTGA--------CAATGCCG------GGATTG--------.....................................................................................................................2215.00501110020000
..................................................GTAAGTGA--------CAATGCCG------GGATTG--------TGGT.................................................................................................................2615.00520000030000
..................................................................................................................................CT--CACGGC-ATT--ATATT-CACTTG.....................................................2215.00505000000000
.....................................................................................................................T--ACCTTCTCCACT--CACGGC-AT....................................................................2114.00404000000000
..................................................GTAAGTGA--------CAATGCCG------GG.................................................................................................................................1814.00404000000000
..................................................................................................................................CT--CACGGC-ATT--ATATT-CACTTGC....................................................2314.00404000000000
........................................................GA--------CAATGCCG------GGATTG--------TGGTT................................................................................................................2114.00402000020000
....................................................................................................................................................................................AGAAACAGCTCAAGGAGGT............1913.00301100010000
..................................................GTAAGTGA--------CAATGCCG------GGAT...............................................................................................................................2013.00311100000000
..................................................GTAAGTGA--------CAATGCCG------GGATTG--------TGGTTAT..............................................................................................................2913.00330000000000
....................................................AAGTGA--------CAATGCCG------GGATTG--------TGG..................................................................................................................2313.00303000000000
..................................................GTAAGTGA--------CAATGCCG------GGATTG--------TG...................................................................................................................2413.00301000020000
..................................................................................................................................................................................GGAGAAACAGCTCAAGGAGGT............2112.00200000020000
..................................................................CAATGCCG------GGATTG--------TGGTT................................................................................................................1912.00200000020000
.................................................................................................................................ACT--CACGGC-ATT--ATATT-CACTTGCAGC.................................................2712.00201100000000
..CTGATCATACTGCTGAGCTTTATTTACCC....................................................................................................................................................................................2912.00220000000000
..................................................................................................................................CT--CACGGC-ATT--ATATT-CACTTGCAGT.................................................2612.00201100000000
......................................................GTGA--------CAATGCCG------GGATTG--------T....................................................................................................................1912.00202000000000
................................................................................................................A----T--ACCTTCTCCACT--CACGGC-......................................................................2012.00202000000000
.................................................................................................................................ACT--CACGGC-ATT--ATATT-CACTTGCG...................................................2512.00220000000000
...................................................................................................ATTGAAA------A----T--ACCTTCTCCACT--CACGGC-......................................................................2712.00202000000000
................................................................................................................................................................GTACATCACCGCCGAGAAGGA..............................2112.00201000010000
...................................................................................................................................................................CATCACCGCCGAGAAGGAG.............................1912.00200000020000
.................................................................................................................................ACT--CACGGC-ATT--ATATT-CACC.......................................................2112.00220000000000
.....................................................................................................................T--ACCTTCTCCACT--CACGGC-A.....................................................................2012.00202000000000
....................................................AAGTGA--------CAATGCCG------GGATTG--------TGGTTATTG............................................................................................................2912.00200000020000
.....................................................AGTGA--------CAATGCCG------GGATTG--------T....................................................................................................................2012.00200100010000
.............................................................................................................................................ATT--ATATT-CACTTGCAGTT................................................1912.00202000000000
.......................................................TGA--------CAATGCCG------GGATTG--------TGGTTATTG............................................................................................................2612.00202000000000
.....................................................................................................................T--ACCTTCTCCACT--CACGGC-......................................................................1912.00202000000000
.........................................................................................................................................GGC-ATT--ATATT-CACTTGCAG..................................................2012.00202000000000
...................................................TAAGTGA--------CAATGCCG------GGATTG--------TGG..................................................................................................................2411.00101000000000
........................................................................................................................ACCTTCTCCACT--CACGGC-A.....................................................................1911.00101000000000
..........................................................................................................................CTTCTCCACT--CACGGC-ATT--.................................................................1911.00101000000000
..................................................GTAAGTGA--------CAATGCCG------GGAC...............................................................................................................................2011.00100100000000
........................................................................................................................ACCTTCTCCACT--CACGGC-ATT--.................................................................2111.00101000000000
.................................................................................................................................ACT--CACGGC-ATT--ATATT-CACTTGCAGTA................................................2811.00101000000000
.......................................................................................................AAA------A----T--ACCTTCTCCACT--CACGGC-ATT--.................................................................2611.00101000000000
..................................................GTAAGTGA--------CAATGCCG------GGA................................................................................................................................1911.00100000010000
...................................................................................................................................T--CACGGC-ATT--ATATT-CACTTGC....................................................2211.00101000000000
...................................................................................................................................................................................GAGAAACAGCTCAAGGAGGTGATGA.......2511.00101000000000
....................................................................................................................................................................ATCACCGCCGAGAAGGAGAAACAGCC.....................2611.00100100000000
....................................................AAGTGA--------CAATGCCG------GGATTG--------TG...................................................................................................................2211.00100000010000
..............................................................................................................................................................................AGAAGGAGAAACAGCTCAAGGA...............2211.00100000010000
......................................................GTGA--------CAATGCCG------GGATTG--------TGG..................................................................................................................2111.00101000000000
...................................................................................................................................T--CACGGC-ATT--ATATT-CACTTGCA...................................................2311.00101000000000
.......................................................................................................................................................................................AACAGCTCAAGGAGGTGATGAAGATCAT2811.00100000010000
......................................................GTGA--------CAATGCCG------GGATTG--------TGGTTATT.............................................................................................................2611.00101000000000
....................................................AAGTGA--------CAATGCCG------GGATTG--------TGGT.................................................................................................................2411.00100000010000
......................................................GTGA--------CAATGCCG------GGATTG--------TGGTTATTG............................................................................................................2711.00101000000000
.....................................................AGTGA--------CAATGCCG------GGATTG--------TGGTTA...............................................................................................................2511.00100100000000
.............................................................................................................................................................................GAGAAGGAGAAACAGCTCAAG.................2111.00101000000000
...............................................................................................................................................................................GAAGGAGAAACAGCTCAAGGAGGT............2411.00100000010000
.................................................................................................................................ACT--CACGGC-ATT--ATATT-CACTTGCAGTT................................................2811.00100000010000
..................................................................CAATGCCG------GGATTG--------TGGTTATTG............................................................................................................2311.00100000010000
.................................................................................................TTATTGAAA------A----T--ACCTTCTCCACT--CACGGC-......................................................................2911.00101000000000
....................................................................ATGCCG------GGATTG--------TGGTTATTGAA..........................................................................................................2311.00101000000000
...................................................................................................ATTGAAA------A----T--ACCTTCTCCACT--CACGG........................................................................2611.00101000000000
.........................................................................................................................................GGC-ATT--ATATT-CACTTGCAGT.................................................2111.00101000000000
...................................................................AATGCCG------GGATTG--------TGGTTA...............................................................................................................1911.00100000010000
........................................................GA--------CAATGCCG------GGATTG--------TGG..................................................................................................................1911.00100100000000
....GATCATACTGCTGAGCTTT............................................................................................................................................................................................1911.00100000010000
..................................................................................................................................CT--CACGGC-ATT--ATATT-CACTTGTT...................................................2411.00101000000000
...........................................................................................................................................C-ATT--ATATT-CACTTGCAGTT................................................2011.00100000010000
................................................................................................................................CACT--CACGGC-ATT--ATATT-CACTTGCAG..................................................2711.00101000000000
................................................................................................................................CACT--CACGGC-ATT--ATATT-CACT.......................................................2211.00100100000000
......................................................................................................GAAA------A----T--ACCTTCTCCACT--CACGG........................................................................2311.00101000000000
................................................................................................................................CACT--CACGGC-ATT--ATATT-CACTTGCAGT.................................................2811.00101000000000
........................................................GA--------CAATGCCG------GGATTG--------TGGTTAT..............................................................................................................2311.00100000010000
..................................................................CAATGCCG------GGATTG--------TGGT.................................................................................................................1811.00101000000000
.................................................................................................................................ACT--CACGGC-ATT--ATATT-CACTTGG....................................................2411.00110000000000
CGCTGATCATACTGCTGAGC...............................................................................................................................................................................................2011.00101000000000
.....................................................................................................................T--ACCTTCTCCACT--CACGGC-ATT--.................................................................2211.00101000000000
......................................................................................................................................CACGGC-ATT--ATATT-CACTTGCA...................................................2211.00110000000000
.................................................................................................................................................................................AGGAGAAACAGCTCAAGGAGGTGATG........2611.00100000010000
.................................................................................................................................ACT--CACGGC-ATT--ATATT-CACTTGCAC..................................................2611.00101000000000
..................................................GTAAGTGA--------CAATGCCG------GGATT..............................................................................................................................2111.00101000000000
................................................................................................................................................................................AAGGAGAAACAGCTCAAGGAGGT............2311.00100000010000
..................................................GTAAGTGA--------CAATGCCG------GGATTG--------TGA..................................................................................................................2511.00101000000000
....................................................................ATGCCG------GGATTG--------TGGTTATT.............................................................................................................2011.00100000010000
....................................................AAGTGA--------CAATGCCG------GGATTG--------T....................................................................................................................2111.00100000010000
....................................................AAGTGA--------CAATGCCG------GGATTG--------.....................................................................................................................2011.00100000010000
...................................................................................................................................T--CACGGC-ATT--ATATT-CACTTGCAGT.................................................2511.00100000100000
.....................................................................................................................................................................................GAAACAGCTCAAGGAGGT............1811.00101000000000
.......CATACTGCTGAGCTTTATTTACCCATG.................................................................................................................................................................................2711.00100000010000
.........................................................................................................A------A----T--ACCTTCTCCACT--CACGGC-......................................................................2111.00101000000000
...................................................TAAGTGA--------CAATGCCG------GGATTG--------TG...................................................................................................................2311.00101000000000
......................................................................GCCG------GGATTG--------TGGTTATTGAA..........................................................................................................2111.00101000000000
.................................................................................................................................ACT--CACGGC-ATT--ATATT-CACTTGCT...................................................2511.00110000000000
.GCTGATCATACTGCTGAGCT..............................................................................................................................................................................................2011.00100000010000
.........................................................................................................A------A----T--ACCTTCTCCACT--CACGGC-ATT--AT...............................................................2611.00101000000000
....................................................AAGTGA--------CAATGCCG------GGAT...............................................................................................................................1811.00101000000000
.............................................................................................................................................ATT--ATATT-CACTTGCAGT.................................................1811.00101000000000
.................................................................................................................................................................................AGGAGAAACAGCTCAAGGAGGT............2211.00100000010000
...................................................TAAGTGA--------CAATGCCG------GGA................................................................................................................................1811.00101000000000
...........................................................................................................................TTCTCCACT--CACGGC-ATT--ATATT-CACTTG.....................................................2911.00101000000000
......................................................................................................................................CACGGC-ATT--ATATT-CACTTGCAGT.................................................2411.00100000100000
......................................................GTGA--------CAATGCCG------GGATTG--------TGGT.................................................................................................................2211.00101000000000
......................................................................................................................................................................CACCGCCGAGAAGGAGAAACAGCC.....................2411.00100100000000
.....................................................AGTGA--------CAATGCCG------GGATTG--------.....................................................................................................................1911.00100000010000
......................................................................................................................................CACGGC-ATT--ATATT-CACTTGC....................................................2111.00110000000000
.................................................................................GATTG--------TGGTTATTGAAA------A----T--ACC........................................................................................2211.00100100000000
.....................................................................................................................................................................................GAAACAGCTCAAGGAGGTGAT.........2111.00100000010000
.....................................................AGTGA--------CAATGCCG------GGATTG--------TGG..................................................................................................................2211.00101000000000
......................................................GTGA--------CAATGCCG------GGATTG--------TG...................................................................................................................2011.00101000000000
.............................................................................................................................................................................GAGAAGGAGAAACAGCTCAAGGAGGTGA..........2811.00100000010000
................................................................................................................A----T--ACCTTCTCCACT--CACGGC-ATT--.................................................................2311.00101000000000
..................................................GTAAGTGA--------CAATGCCG------GGATTG--------G....................................................................................................................2311.00110000000000
.............................................................................................................................................ATT--ATATT-CACTTGCAGTTT...............................................2080.13101000000000
droEre2
CGCTGATCATACTGTTGAGCTTTATTTATCCCTGCACGTACATCACCAAGGTAAGTGA--------CAGTGCCG------GGATTG--------TGGTTATTAAAA------A----T--ACCTTCTCCACT--CACGGC-ATT--TCATT-CACTTGCAGTACATCACCGCCGAGAAGGAGAAACAGCTCAAGGAGGTGATGAAGATCATSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTG.....................................................231184.00184180200020
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTGCA...................................................251179.00179123113021129
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTT......................................................221159.001594903011060
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTGCAG..................................................261149.001491137011243
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACT.......................................................211147.001472511081120
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTGC....................................................241111.00111931520010
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTGCAGT.................................................27126.002612015170
..................................................GTAAGTGA--------CAGTGCCG------GGATTG--------TGG..................................................................................................................25122.002210003171
..................................................GTAAGTGA--------CAGTGCCG------GGA................................................................................................................................19121.002130001440
..................................................................................................................................CT--CACGGC-ATT--TCATT-CACTTGC....................................................23118.001818000000
..................................................................................................................................CT--CACGGC-ATT--TCATT-CACTTGCA...................................................24114.001413000100
..................................................GTAAGTGA--------CAGTGCCG------GGAT...............................................................................................................................20113.00132000830
..................................................................................................................................CT--CACGGC-ATT--TCATT-CACTTG.....................................................22112.001212000000
..................................................GTAAGTGA--------CAGTGCCG------GGATT..............................................................................................................................2119.0092000430
..................................................................................................................................CT--CACGGC-ATT--TCATT-CACTTGCAG..................................................2519.0099000000
...................................................TAAGTGA--------CAGTGCCG------GGATTG--------T....................................................................................................................2216.0060000150
..................................................GTAAGTGA--------CAGTGCCG------GGATTG--------.....................................................................................................................2215.0050000320
..................................................GTAAGTGA--------CAGTGCCG------GGATTG--------TG...................................................................................................................2415.0051000220
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CAC........................................................2014.0042010010
......................................................................................................................................CACGGC-ATT--TCATT-CACTTGCAGT.................................................2413.0030100110
..................................................GTAAGTGA--------CAGTGCCG------GGATTG--------T....................................................................................................................2313.0030000120
...................................................TAAGTGA--------CAGTGCCG------GGATTG--------TGG..................................................................................................................2413.0030000030
..................................................................................................................................CT--CACGGC-ATT--TCATT-CACT.......................................................2013.0031000020
..................................................GTAAGTGA--------CAGTGCCG------GGATTG--------TGGT.................................................................................................................2613.0031000200
...................................................................................................................................T--CACGGC-ATT--TCATT-CACTTGCA...................................................2312.0022000000
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTGCAGA.................................................2712.0020000020
..................................................GTAAGTGA--------CAGTGCCG------GGATTG--------TGGTT................................................................................................................2712.0020100100
..................................................................................................................................CT--CACGGC-ATT--TCATT-CACTTGCAGT.................................................2612.0020010100
.................................................................................................................................................................................AGGAGAAACAGCTCAAGGAGGT............2212.0020000110
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CA.........................................................1912.0021010000
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTGCAGC.................................................2712.0021100000
................................................................................................................................CACT--CACGGC-ATT--TCATT-CACTTGCAG..................................................2712.0022000000
......................................................................................................................................CACGGC-ATT--TCATT-CACTTGCA...................................................2212.0021000010
..................................................GTAAGTGA--------CAGTGCCG------GG.................................................................................................................................1812.0020000110
..................................................................................................................................CT--CACGGC-ATT--TCATT-CACTT......................................................2112.0022000000
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTGCAA..................................................2612.0022000000
.............................................................................................................................................ATT--TCATT-CACTTGCAGT.................................................1812.0020000020
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTGCAT..................................................2612.0021000010
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTGCAC..................................................2612.0020200000
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTGT....................................................2412.0020000110
.....................................................................................................................................................................................GAAACAGCTCAAGGAGGT............1812.0020000110
...................................................TAAGTGA--------CAGTGCCG------GGATTG--------TG...................................................................................................................2311.0010000010
....................................................................................................................................................................................AGAAACAGCTCAAGGAGGT............1911.0010000100
...............................................................................................................................................................................GAAGGAGAAACAGCTCAAGGAGGTGA..........2611.0010000010
...................................................................................................................................T--CACGGC-ATT--TCATT-CACTTGC....................................................2211.0011000000
..................................................................CAGTGCCG------GGATTG--------TGGTTATTAAA..........................................................................................................2511.0010000100
....................................................................................................................................................................................AGAAACAGCTCAAGGAGGTGATGAA......2511.0010000100
.....................................................................................................................................................................................GAAACAGCTCAAGGAGGTGATGAA......2411.0010000100
................................................................................................................................CACT--CACGGC-ATT--TCATT-CACTT......................................................2311.0011000000
........................................................GA--------CAGTGCCG------GGATTG--------TGGT.................................................................................................................2011.0010001000
.................................................................................................TTATTAAAA------A----T--ACCTTCTCC..................................................................................2011.0011000000
...................................................................AGTGCCG------GGATTG--------TGGTT................................................................................................................1811.0010000010
............................................................................................................................TCTCCACT--CACGGC-ATT--TCATT-CACTT......................................................2711.0011000000
.....................................................................................................................T--ACCTTCTCCACT--CACGGC-ATT--.................................................................2211.0011000000
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTC.....................................................2311.0011000000
........................................................................................................................ACCTTCTCCACT--CACGGC-......................................................................1811.0011000000
...........................................................................................................................TTCTCCACT--CACGGC-ATT--TCATT-CACT.......................................................2711.0011000000
....................TTTATTTATCCCTGCACGTACAT........................................................................................................................................................................2311.0010000010
......................................................................................................................................CACGGC-ATT--TCATT-CACTTGCAG..................................................2311.0010000010
...................................................TAAGTGA--------CAGTGCCG------GGATTG--------.....................................................................................................................2111.0010000100
...............................................................................................................................................................................GAAGGAGAAACAGCTCAAGGA...............2111.0010000010
......................................................................................................................................................................................AAACAGCTCAAGGAGGTGAT.........2011.0010000100
......................................................GTGA--------CAGTGCCG------GGATTG--------.....................................................................................................................1811.0010000100
....................................................AAGTGA--------CAGTGCCG------GGATTG--------.....................................................................................................................2011.0011000000
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTGCC...................................................2511.0011000000
....................................................AAGTGA--------CAGTGCCG------GGATTG--------TG...................................................................................................................2211.0010000100
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTGCAGTT................................................2811.0011000000
.......................................................TGA--------CAGTGCCG------GGATTG--------T....................................................................................................................1811.0010000010
................................................................................................................................................................GTACATCACCGCCGAGAAGGAGA............................2311.0010000100
......................................................GTGA--------CAGTGCCG------GGATTG--------TGGTTAT..............................................................................................................2511.0010000010
...................................................................................................................................T--CACGGC-ATT--TCATT-CACT.......................................................1911.0011000000
..................................................................................................................................CT--CACGGC-ATT--TCATT-CACTTGCT...................................................2411.0011000000
.................................................................................................................................................................................AGGAGAAACAGCTCAAGGAGGTGATGA.......2711.0010000100
.................................................................................................................................ACT--CACGGC-ATT--TCATT-CACTTCA....................................................2411.0011000000
......................................................GTGA--------CAGTGCCG------GGATTG--------TG...................................................................................................................2011.0010000100
...................................................................................................................................T--CACGGC-ATT--TCATT-CACTTG.....................................................2111.0011000000
........................................................GA--------CAGTGCCG------GGATTG--------TGGTTATT.............................................................................................................2411.0010000010
...................................................................................................................................T--CACGGC-ATT--TCATT-CACTTGCAG..................................................2411.0011000000
.............................................................................................................................................ATT--TCATT-CACTTGCAGTT................................................1920.5010000100

Generated: 10/20/2015 at 07:25 PM