ID:

dpe_338

 Coordinate:

scaffold_1:4544398-4544461 +

 Confidence:

Known Ortholog

 Class:

Mirtron

 Genomic Locale:

intron

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-15.9

Flybase annnotation

intron [Dper\GL19340-in]; utr3 [utr3_minus_1584]; CDS [Dper\GL19340-cds]; CDS [Dper\GL19340-cds]

No Repeatable elements found

Sense Strand Reads

ATGGTATCAGCACTCTGATCCGCATTCTGTCGACTCGCGTCAACTTTCAGGTGAGTTTGAAATTGAAATGTGTAAATTGTTTGTGCCAATTTAAATTCGATTTCTTATTCATAGGTGCAATACCAGCTGATCTTCTGCCTGTGGGTGCTGACCTTCAACCCCCT

**************************************************((((((..(((((((((.....(((((((.......)))))))..)))))))))..))))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M042

female body

 V050

head

 V111

male body		 V057

head

 M021

embryo

 V042

embryo
...........................................................................................TAAATTCGATTTCTTATTCATAG.................................................. 23 0 1 1291.00 1291 1174 70 1 13 15 18
...........................................................................................TAAATTCGATTTCTTATTCAT.................................................... 21 0 1 405.00 405 205 96 2 96 0 6
...........................................................................................TAAATTCGATTTCTTATTCATA................................................... 22 0 1 209.00 209 186 12 1 9 0 1
...........................................................................................TAAATTCGATTTCTTATTCATAGT................................................. 24 1 1 139.00 139 41 43 8 46 0 1
..................................................GTGAGTTTGAAATTGAAATGTGT........................................................................................... 23 0 1 136.00 136 4 3 114 15 0 0
............................................................................................AAATTCGATTTCTTATTCATAG.................................................. 22 0 1 96.00 96 96 0 0 0 0 0
..................................................GTGAGTTTGAAATTGAAATGTGTAAA........................................................................................ 26 0 1 96.00 96 1 5 75 14 0 1
...........................................................................................TAAATTCGATTTCTTATTCA..................................................... 20 0 1 63.00 63 27 27 0 9 0 0
..................................................GTGAGTTTGAAATTGAAATGTGTA.......................................................................................... 24 0 1 45.00 45 1 1 39 3 0 1
...........................................................................................TAAATTCGGTTTCTTATTCATAG.................................................. 23 1 1 34.00 34 34 0 0 0 0 0
..................................................GTGAGTTTGAAATTGAAATGTGTAA......................................................................................... 25 0 1 22.00 22 1 0 18 3 0 0
............................................................................................AAATTCGATTTCTTATTCATAGT................................................. 23 1 1 21.00 21 11 4 0 6 0 0
............................................................................................AAATTCGATTTCTTATTCAT.................................................... 20 0 1 20.00 20 18 0 0 1 0 1
...........................................................................................TAAATTCGATTTCTTATTCATAGA................................................. 24 1 1 15.00 15 14 0 0 0 0 1
..................................................GTGAGTTTGAAATTGAAATGTG............................................................................................ 22 0 1 13.00 13 2 0 8 3 0 0
..................................................GTGAGTTTGAAATTGAAATGTGTAAAT....................................................................................... 27 0 1 12.00 12 0 0 9 3 0 0
..........................................................................................TTAAATTCGATTTCTTATTCATAG.................................................. 24 0 1 12.00 12 12 0 0 0 0 0
.......................ATTCTGTCGACTCGCGTC........................................................................................................................... 18 0 1 11.00 11 0 0 0 0 11 0
............................................................................................AAATTCGATTTCTTATTCATA................................................... 21 0 1 10.00 10 10 0 0 0 0 0
...............................................................................................TTCGATTTCTTATTCATAGTTT............................................... 22 2 1 10.00 10 2 5 0 3 0 0
...........................................................................................TAAATTCGCTTTCTTATTCATAG.................................................. 23 1 1 8.00 8 8 0 0 0 0 0
...........................................................................................TAAATTCGATTTCTTATTCATAA.................................................. 23 1 1 8.00 8 8 0 0 0 0 0
...........................................................................................TAAATTCGGTTTCTTATTCATA................................................... 22 1 1 7.00 7 7 0 0 0 0 0
.............................................................................................AATTCGATTTCTTATTCATAG.................................................. 21 0 1 7.00 7 7 0 0 0 0 0
...........................................................................................TAAATTCGTTTTCTTATTCATAG.................................................. 23 1 1 6.00 6 6 0 0 0 0 0
...........................................................................................TAAATTCGATTTCTTATTCATAT.................................................. 23 1 1 6.00 6 3 2 0 1 0 0
..........................................................................................TTAAATTCGATTTCTTATTCAT.................................................... 22 0 1 6.00 6 4 0 0 2 0 0
...................................................................................................................................CTTCTGCCTGTGGGTGCT............... 18 0 1 5.00 5 0 0 0 0 5 0
..........................................................................................TTAAATTCGATTTCTTATTCA..................................................... 21 0 1 5.00 5 2 3 0 0 0 0
...........................................................................................TAAATTCGGTTTCTTATTCAT.................................................... 21 1 1 4.00 4 4 0 0 0 0 0
.........................................................................................................................ACCAGCTGATCTTCTGCCTGTGGGTGCT............... 28 0 1 4.00 4 0 0 0 0 4 0
............................................................................................AAATTCGAATTCTTATTCATAG.................................................. 22 1 1 4.00 4 4 0 0 0 0 0
...........................................................................................TAAATTCGATTTCTTATTC...................................................... 19 0 1 4.00 4 0 3 0 1 0 0
.......................ATTCTGTCGACTCGCGTCA.......................................................................................................................... 19 0 1 4.00 4 0 0 0 0 4 0
............CTCTGATCCGCATTCTGTCGACT................................................................................................................................. 23 0 1 4.00 4 0 0 0 0 4 0
..............................................................................................ATTCGATTTCTTATTCATAGTT................................................ 22 1 1 4.00 4 1 0 0 3 0 0
.......................ATTCTGTCGACTCGCGTCAACT....................................................................................................................... 22 0 1 4.00 4 0 0 0 0 4 0
...........................................................................................TAAATTCGATTTCTTATTCATAAA................................................. 24 2 1 4.00 4 4 0 0 0 0 0
...........ACTCTGATCCGCATTCTGTCGACTCGC.............................................................................................................................. 27 0 1 3.00 3 0 0 0 0 3 0
.............TCTGATCCGCATTCTGTC..................................................................................................................................... 18 0 1 3.00 3 0 0 0 0 3 0
...........................................................................................TAAATTCGATTTCTTATTCATAGTT................................................ 25 1 1 3.00 3 1 2 0 0 0 0
.....ATCAGCACTCTGATCCGC............................................................................................................................................. 18 0 1 3.00 3 0 0 0 0 3 0
.............................................................................................AATTCGATTTCTTATTCATAGT................................................. 22 1 1 3.00 3 2 0 0 1 0 0
...........................................................................................TAAATTCGCTTTCTTATTCAT.................................................... 21 1 1 3.00 3 3 0 0 0 0 0
...........................................................................................TAAATTCGATTTCTTATTCATATT................................................. 24 2 1 3.00 3 0 1 0 2 0 0
..........................................................................................TTAAATTCGATTTCTTATTCATA................................................... 23 0 1 3.00 3 1 1 0 1 0 0
.............................................................................................AATTCGATTTCTTATTCAT.................................................... 19 0 1 3.00 3 2 0 0 1 0 0
..........................................................................................................................CCAGCTGATCTTCTGCCTGTGGGTGCT............... 27 0 1 3.00 3 0 0 0 0 3 0
............................................................................................................................AGCTGATCTTCTGCCTGTGGGTGCT............... 25 0 1 3.00 3 0 0 0 0 2 1
...........................................................................................TAAATTCGCTTTCTTCTTCAT.................................................... 21 2 1 2.00 2 0 0 0 2 0 0
............................................................................................AAATTCGATTTCTTATTC...................................................... 18 0 1 2.00 2 2 0 0 0 0 0
.......................ATTCTGTCGACTCGCGTCAA......................................................................................................................... 20 0 1 2.00 2 0 0 0 0 2 0
...........ACTCTGATCCGCATTCTGTCGACT................................................................................................................................. 24 0 1 2.00 2 0 0 0 0 2 0
...........................................................................................GAAATTCGATTTCTTATTCAT.................................................... 21 1 1 2.00 2 2 0 0 0 0 0
.......CAGCACTCTGATCCGCATTCTGTCGA................................................................................................................................... 26 0 1 2.00 2 0 0 0 0 2 0
..........................................................................................CTAAATTCGATTTCTTATTCATAG.................................................. 24 1 1 2.00 2 2 0 0 0 0 0
..........................................................................................TTAAATTCGATTTCTTATTCATAGT................................................. 25 1 1 2.00 2 2 0 0 0 0 0
...........................................................................................TAAATTCGATTGCTTATTCA..................................................... 20 1 1 2.00 2 0 0 0 2 0 0
.................................CTCGCGTCAACTTTCAGGT................................................................................................................ 19 0 1 2.00 2 2 0 0 0 0 0
.......CAGCACTCTGATCCGCATTCTGTCGACT................................................................................................................................. 28 0 1 2.00 2 0 0 0 0 2 0
..........................................................................................GTAAATTCGATTTCTTATTCAT.................................................... 22 1 1 2.00 2 2 0 0 0 0 0
..................................................GTGAGTTTGAAATTGAAATGTGTAAAA....................................................................................... 27 1 1 2.00 2 0 0 2 0 0 0
...........................................................................................TAAATGCGATTTCTTATTCATAG.................................................. 23 1 1 2.00 2 0 0 0 2 0 0
............................................................................................................................AGCTGATCTTCTGTCTGTGGGTGCT............... 25 1 1 2.00 2 0 0 0 0 2 0
...........................................................................................TAAATTCGGTTTCTTATTCA..................................................... 20 1 1 2.00 2 2 0 0 0 0 0
.....................................................................................................................CAATACCAGCTGATCTTCTGCCTGTGGGG.................. 29 1 1 2.00 2 0 0 0 0 2 0
..................................................GTGAGTTTGAAATTGAAATGT............................................................................................. 21 0 1 2.00 2 0 0 1 1 0 0
...........................................................................................TAAATTCGATTTCTTATTCATCG.................................................. 23 1 1 2.00 2 1 0 0 0 0 1
...........................................................................................TAAATGCGATTTCTTATTCA..................................................... 20 1 1 2.00 2 0 2 0 0 0 0
...........................................................................ATTGTTTGTGCCAATTTAAATTCGAT............................................................... 26 0 1 2.00 2 0 0 0 0 2 0
.............TCTGATCCGCATTCTGTCGACTCGCGT............................................................................................................................ 27 0 1 2.00 2 0 0 0 0 2 0
............................................................................................AAATTCGAGTTCTTATTCATAG.................................................. 22 1 1 2.00 2 2 0 0 0 0 0
............................................................................................AAATTCGATTTCTTATTCA..................................................... 19 0 1 2.00 2 2 0 0 0 0 0
...........................................................................................TAAATTCGCTTTCTTATTCATA................................................... 22 1 1 2.00 2 2 0 0 0 0 0
...........................................................................................TAAATTCGATTTCTTATTCATTG.................................................. 23 1 1 2.00 2 1 0 0 0 0 1
.........GCACTCTGATCCGCATTCTGTCGAC.................................................................................................................................. 25 0 1 2.00 2 0 0 0 0 2 0
...........................................................................................GAAATTCGATTTCTTATTCATAG.................................................. 23 1 1 2.00 2 2 0 0 0 0 0
...........................................................................................TAAATTCGAGTTCTTATTCATAG.................................................. 23 1 1 2.00 2 1 0 0 1 0 0
............CTCTGATCCGCATTCTGTCGACTCGCGTC........................................................................................................................... 29 0 1 2.00 2 0 0 0 0 2 0
.......CAGCACTCTGATCCGCATTCT........................................................................................................................................ 21 0 1 2.00 2 0 0 0 0 2 0
...........................................................................................TAAATTCGATTTCTTGTTCATAG.................................................. 23 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................TAAATACGATTTCTTATTCATAG.................................................. 23 1 1 1.00 1 0 1 0 0 0 0
...........................................................................................CTAATTCGATTTCTTATTCATAG.................................................. 23 2 1 1.00 1 1 0 0 0 0 0
.............TCTGATCCGCATTCTGTCGACT................................................................................................................................. 22 0 1 1.00 1 0 0 0 0 1 0
............................................................................................AAATTCGATTTCTTATTCATAA.................................................. 22 1 1 1.00 1 1 0 0 0 0 0
................................................................................................TCGATGTCTTATTCATAGGCT............................................... 21 3 1 1.00 1 0 0 0 1 0 0
..................................................GTGAGTTTGAAATTGATATGTGT........................................................................................... 23 1 1 1.00 1 0 0 0 1 0 0
...........................................................................................TAAATTCGATTTCTTATTCATG................................................... 22 1 1 1.00 1 1 0 0 0 0 0
............................................................................................AAATTCGAGTTCTTATTCAT.................................................... 20 1 1 1.00 1 1 0 0 0 0 0
..................................................GTGATTTTGAAATTGAAATGTGTA.......................................................................................... 24 1 1 1.00 1 0 0 1 0 0 0
............................................................................................AAATTCGATTTCTTATTCATAGA................................................. 23 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................GTAAATTCGATTTCTTATTCATAA.................................................. 24 2 1 1.00 1 1 0 0 0 0 0
................................................................................................................................GATCTTCTGCCTGTGGGTGCTGACC........... 25 0 1 1.00 1 1 0 0 0 0 0
..............................................................................................ATTCGATTTCTTATTCATAGT................................................. 21 1 1 1.00 1 0 0 0 1 0 0
...........................................................................................TAAATTCGTTTTCTTATTCAT.................................................... 21 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................TAAAATCGATTTCTTATTCAT.................................................... 21 1 1 1.00 1 1 0 0 0 0 0
..................................................GTGAGTTTTAAATTGAAATGTGTAA......................................................................................... 25 1 1 1.00 1 0 0 1 0 0 0
..................................................GTGAGTATGAAATTGAAATGTGTAAA........................................................................................ 26 1 1 1.00 1 0 0 0 1 0 0
.........................................................................................ATTAAATTCGATTTCTTATTCATAG.................................................. 25 1 1 1.00 1 1 0 0 0 0 0
....................................................GAGTTTGAAATTGAAATGTGTAAA........................................................................................ 24 0 1 1.00 1 0 1 0 0 0 0
...........................................................................................TAAATTCGAATTCTTATTCATAG.................................................. 23 1 1 1.00 1 0 0 0 1 0 0
...........................................................................................TAACTTCGATTTCTTCTTCAT.................................................... 21 2 1 1.00 1 0 0 0 1 0 0
............................................................................................GAATTCGATTTCTTATTCATAG.................................................. 22 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................TAAATTCGATTTCTTATT....................................................... 18 0 1 1.00 1 1 0 0 0 0 0
...........................................................................................TAAATGCGATATCTTATTCAT.................................................... 21 2 1 1.00 1 0 1 0 0 0 0
..........................................................................................................................CCAGCTGATCTTCTGCCTGTGGGTGCG............... 27 1 1 1.00 1 0 0 0 0 1 0
...............................................................................................TTCGATTTCTTATTCATAGTT................................................ 21 1 1 1.00 1 0 1 0 0 0 0
..................................................GTGAGTTGGAAATTGAAATGTG............................................................................................ 22 1 1 1.00 1 0 0 1 0 0 0
..................................................GTGAGTTTGAAATTGAAAT............................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0
............................................................................................................................ACCTGATCTTCTGCCTGTGGGTGCTGACC........... 29 1 1 1.00 1 0 0 0 0 1 0
..........................................................................................TTAAATTCAATTTCTTATTCATAG.................................................. 24 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................TAAATTCGTTTTCTTATTCATA................................................... 22 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................TAAATGCGATTTCTTATTCAT.................................................... 21 1 1 1.00 1 0 1 0 0 0 0
..................................................GAGAGTTTGAAATTTAAATGTGT........................................................................................... 23 2 1 1.00 1 0 0 0 1 0 0
..................................................GGGAGGTTGAAATTGAAATGTGT........................................................................................... 23 2 1 1.00 1 0 0 0 1 0 0
...........................................................................................TAAATTCGATTTCTTATTCATGGT................................................. 24 2 1 1.00 1 1 0 0 0 0 0
...........................................................................................TAAATTCGATTTCTTTTTCA..................................................... 20 1 1 1.00 1 0 1 0 0 0 0
...................................................TGAGTTTGAAATTGAAATGTGT........................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0
...........................................................................................TAAATTCGATTGCTTATTCAT.................................................... 21 1 1 1.00 1 0 0 0 1 0 0
...........................................................................................GAAATTCGATTTCTTATTCATAGT................................................. 24 2 1 1.00 1 0 1 0 0 0 0
.............................................................................................................................................TGGGTGCTGACCTTCAACCC... 20 0 1 1.00 1 1 0 0 0 0 0
...........................................................................................TAAAGTCGATTTCTTATTCATAGT................................................. 24 2 1 1.00 1 0 0 0 1 0 0
...........................................................................................TAAATTCGATTTATTATTCAGAG.................................................. 23 2 1 1.00 1 0 0 0 1 0 0
...........................................................................................TAAATTCGATCTCTTATTCAT.................................................... 21 1 1 1.00 1 0 0 0 1 0 0
...........................................................................................TAAATTCGATTTCTTATTCATGG.................................................. 23 1 1 1.00 1 1 0 0 0 0 0
..................................................TTGAGTTTGAAATTGAAATGTGT........................................................................................... 23 1 1 1.00 1 0 0 1 0 0 0
......................CATTCTGTCGACTCGCGT............................................................................................................................ 18 0 1 1.00 1 0 0 0 0 1 0
...........................................................................................TAAATTCGATTTATTATTCAT.................................................... 21 1 1 1.00 1 0 1 0 0 0 0
..................................................GTGAGTTTGAAATTGTAATGTCTAAA........................................................................................ 26 2 1 1.00 1 0 0 0 1 0 0
...................................................TGAGTTTGAAATTGAAATGTGTAAA........................................................................................ 25 0 1 1.00 1 0 0 1 0 0 0
..................................................GTGAGTTTGAATTCGAAATGTGT........................................................................................... 23 2 1 1.00 1 0 0 0 1 0 0
.....ATCAGCACTCTGATCCGCATTCC........................................................................................................................................ 23 1 1 1.00 1 0 0 0 0 1 0
........AGCACTCTGATCCGCATTCTGTC..................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 1 0
...........................................................................................TAAATTCGATTTCTTATTCATAGC................................................. 24 1 1 1.00 1 0 0 0 0 0 1
...............................................................................................TTCGATTTCTTATTCATAG.................................................. 19 0 1 1.00 1 1 0 0 0 0 0
............................................................................................GAATTCGATTTCTTATTCATA................................................... 21 1 1 1.00 1 1 0 0 0 0 0
.................................................................AAATGTGTAAATTGTTTGTGCCA............................................................................ 23 0 1 1.00 1 0 0 0 0 0 1
..................................................GAGAGTTTGAAATTGAAATGTC............................................................................................ 22 2 1 1.00 1 0 1 0 0 0 0
..................................................GTGAGTTTGAAATGGAAATGTGT........................................................................................... 23 1 1 1.00 1 0 0 0 1 0 0
.........GCACTCTGATCCGCATTCTGTC..................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0
................................ACTCGCGTCAACTTTCAGGTGCA............................................................................................................. 23 2 1 1.00 1 1 0 0 0 0 0
....................................................................................................................GCAATACCAGCTGATCTTCTGCCT........................ 24 0 1 1.00 1 0 0 0 0 1 0
...........................................................................................TAAATTCGATTTCTTATTAATAG.................................................. 23 1 1 1.00 1 1 0 0 0 0 0
.....ATCAGCACTCTGATCCGCATTCT........................................................................................................................................ 23 0 1 1.00 1 0 0 0 0 1 0
...........................................................................................TAAATTCGATTTCTTATTTAT.................................................... 21 1 1 1.00 1 0 0 0 1 0 0
...........................................................................................TAGATTCGATTTCTTATTCATAG.................................................. 23 1 1 1.00 1 0 0 0 1 0 0
...............................................................................................TTCGATTTGTTATTCATAGTTG............................................... 22 2 1 1.00 1 1 0 0 0 0 0
...............................................................................................TTCGATTTCTTATTCATAGCTT............................................... 22 2 1 1.00 1 1 0 0 0 0 0
...........................................................................................TAAATTCGCCTTCTTATTCATAGT................................................. 24 3 1 1.00 1 0 0 0 1 0 0
...........ACTCTGATCCGCATTCTGTCGACTCGCGT............................................................................................................................ 29 0 1 1.00 1 0 0 0 0 1 0
.............................................................................................AATTCGATTTCTTATTCATA................................................... 20 0 1 1.00 1 1 0 0 0 0 0
..............................................................................................ATTCGATTTCTTATTCATAG.................................................. 20 0 1 1.00 1 1 0 0 0 0 0
...........................................................................................TAAATTAGATTTCTTATTCAT.................................................... 21 1 1 1.00 1 0 0 0 1 0 0
...........................................................................................TAAATTCGATTTCTTATTCAG.................................................... 21 1 1 1.00 1 0 1 0 0 0 0
..................................................GTCAGTTTGAAATTGAAATGTGT........................................................................................... 23 1 1 1.00 1 0 0 1 0 0 0
............................................................................................AAATTCGATTTCTTGTTCATAG.................................................. 22 1 1 1.00 1 1 0 0 0 0 0
................................................................................................................................GATCTTCTGCCTGTGGGTGC................ 20 0 1 1.00 1 1 0 0 0 0 0
..................................................GTGAGTTTGGAATTGAAATGTG............................................................................................ 22 1 1 1.00 1 0 1 0 0 0 0
..................................................GTGAGTTTGAAATTGAAATGTGCAAA........................................................................................ 26 1 1 1.00 1 0 0 0 1 0 0
..................................................CTGAGTTTGAAATTGAAATGTGTAA......................................................................................... 25 1 1 1.00 1 0 0 1 0 0 0
...........................................................................................TAAATTCGACTTCTTATTCATAGT................................................. 24 2 1 1.00 1 0 0 0 1 0 0
..................................................GTGAGCTTGAAATTCAAATGTGTAGA........................................................................................ 26 3 1 1.00 1 0 0 0 1 0 0
............CTCTGATCCGCATTCTGTCGA................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 1
...........................................................................................TAAATTCGAATTCGTATTCATAG.................................................. 23 2 1 1.00 1 0 1 0 0 0 0
......................................................................................................................AATACCAGCTGATCTTCTGCCTGTGGGT.................. 28 0 1 1.00 1 0 0 0 0 1 0
...........................................................................................TAAATTCGCTTTCTTATTCATCG.................................................. 23 2 1 1.00 1 1 0 0 0 0 0
...........................................................................................TAAATTCGATTTCTTATTCTT.................................................... 21 1 1 1.00 1 0 1 0 0 0 0
....................CGCATTCTGTCGACTCGCGTC........................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0
..........................................................................................TTAAAGTCGATTTCTTATTCAT.................................................... 22 1 1 1.00 1 0 0 0 1 0 0
...........................................................................................TAAATTCGATTTCTTGTTCAT.................................................... 21 1 1 1.00 1 0 0 0 1 0 0
.......................................................................................AAGATAAATTCGATTTCTTATTCATAG.................................................. 27 2 1 1.00 1 1 0 0 0 0 0
................................................................................................................................GATCTTCTGCCTGTGGGT.................. 18 0 1 1.00 1 1 0 0 0 0 0
...........................................................................................TAAATTCGTTTTCTTATTCATGG.................................................. 23 2 1 1.00 1 1 0 0 0 0 0
...................CCGCATTCTGTCGACTCG............................................................................................................................... 18 0 1 1.00 1 0 0 0 0 1 0
..............................................................................................ATTCGATTTCTTATTCAT.................................................... 18 0 1 1.00 1 1 0 0 0 0 0
.............................................................................................AATTCGATTTCTTATTCA..................................................... 18 0 1 1.00 1 1 0 0 0 0 0
...........................................................................................TAAATTCGATGTCTTATTCAT.................................................... 21 1 1 1.00 1 0 0 0 1 0 0
...........................................................................................TAAATGCGATTTTTTATTCATAGT................................................. 24 3 1 1.00 1 0 1 0 0 0 0
.........GCACTCTGATCCGCATTCTGTCGACTC................................................................................................................................ 27 0 1 1.00 1 0 0 0 0 1 0
...........................................................................................TAAATTCGATTTCTTATTTATAG.................................................. 23 1 1 1.00 1 0 1 0 0 0 0
............................................................................................AAATTCGATTTCTTATTCATAAT................................................. 23 2 1 1.00 1 0 1 0 0 0 0
.........GCACTCTGATCCGCATTCTGTCGA................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0
...........................................................................ATTGTTTGTGCCAATTTAAATTCGAC............................................................... 26 1 1 1.00 1 0 0 0 0 1 0
...............................................................................................TTCGATTTCTTATTCATAGCTTT.............................................. 23 3 1 1.00 1 0 1 0 0 0 0
ATGGTATCAGCACTCTGATC................................................................................................................................................ 20 0 1 1.00 1 0 0 0 0 1 0
...................................................TGAGTTTGAAATTGAAATGTGTA.......................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0
...........................................................................................TAAATGCGATTTCTTATTCCTAGT................................................. 24 3 1 1.00 1 0 0 0 1 0 0
............................................................................................AAATTCGACTTCTTATTCATA................................................... 21 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................TTAAATTCTATTTCTTATTCATAGT................................................. 25 2 1 1.00 1 1 0 0 0 0 0
.....................................................................................................................CAATACCAGCTGATCTTCTGCCTGTGGGT.................. 29 0 1 1.00 1 0 0 0 0 1 0
.....................................................................................................................................TCTGCCTGTGGGTGCTGACCTTCAACCCC.. 29 0 1 1.00 1 0 0 0 0 1 0
..................................................GTGAGTTTGAAATTGAAATGCGT........................................................................................... 23 1 1 1.00 1 0 0 1 0 0 0
..................................................GTTAGTTTGAAATTGAAATGTG............................................................................................ 22 1 1 1.00 1 0 0 1 0 0 0
...........................................................................................AAAATTCGATTTCTTATTCATAG.................................................. 23 1 1 1.00 1 0 1 0 0 0 0
...........................................................................................TAAATTCGACTGCTTATTCATAG.................................................. 23 2 1 1.00 1 0 1 0 0 0 0
............................................................................................AAATTCGATTTCTTATTCATATT................................................. 23 2 1 1.00 1 0 0 0 1 0 0
.......CAGCACTCTGATCCGCAT........................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 1 0
..................................................GTGAGTTTGAAATTGAAATG.............................................................................................. 20 0 1 1.00 1 0 0 1 0 0 0
..........................................................................................TTAAATTCGATTTCTTATTC...................................................... 20 0 1 1.00 1 1 0 0 0 0 0
..........................................................................................................................CCAGCTGATCTTCTGCCTGTGGGTGCC............... 27 1 1 1.00 1 0 0 0 0 1 0
...........................................................................................TAAATTAGATTTCTTATTCA..................................................... 20 1 1 1.00 1 0 1 0 0 0 0
...........................................................................................TAAATTGGATTTCTCATTCATCG.................................................. 23 3 2 0.50 1 0 1 0 0 0 0
.............................................................................................TATTCGATTTCTTATTCAT.................................................... 19 1 2 0.50 1 1 0 0 0 0 0
............................................................................................AATTTCGGTTTCTTATTCATAGT................................................. 23 3 2 0.50 1 0 0 0 1 0 0
...........................................................................................TAAATTCCATTTCTCATTCAT.................................................... 21 2 2 0.50 1 0 1 0 0 0 0
...........................................................................................TAAATTCAATTTCTTATTCATAGA................................................. 24 2 2 0.50 1 1 0 0 0 0 0
...................................................................................................................................CTTCTGCCTGTGAGTGCT............... 18 1 3 0.33 1 0 0 0 0 1 0
...........................................................................................TAATTTCGATTGCTTATTCAT.................................................... 21 2 3 0.33 1 0 0 0 1 0 0
.......................................................TGTGAAATTGGAATGTGTA.......................................................................................... 19 2 4 0.25 1 0 0 0 1 0 0
...........................................................................................TAAATTCGATTTCTTCTTCC..................................................... 20 2 4 0.25 1 0 0 0 1 0 0
...........................................................................................TCAATTCGATTTCTTCTTCATAT.................................................. 23 3 4 0.25 1 0 1 0 0 0 0
...........................................................................................TAATTTCGTTTTCTTATTCAT.................................................... 21 2 4 0.25 1 0 0 0 1 0 0
...........................................................................................TAAATTAGACTTCTTATTGATA................................................... 22 3 5 0.20 1 0 0 0 1 0 0
...........................................................................................CAAAGTCGATTTCTTCTTCAT.................................................... 21 3 5 0.20 1 0 0 0 1 0 0
..........................................................GCAATTGGAATGTGTAAATCG..................................................................................... 21 3 6 0.17 1 0 0 0 1 0 0
...........................................................................................TAGATGCGTTTTCTTATTCAT.................................................... 21 3 7 0.14 1 0 0 0 1 0 0
...............................................................................................TTCGATTTCTTATTCATATCTT............................................... 22 3 8 0.13 1 0 0 0 1 0 0
...........................................................................................TAAATGAGATTTCTTATTCAG.................................................... 21 3 9 0.11 1 0 1 0 0 0 0
...........................................................................................TACGTGCGATTTCTTATTCA..................................................... 20 3 9 0.11 1 0 0 0 1 0 0
..................................................GTAAGTTTGAAATTCAAAT............................................................................................... 19 2 10 0.10 1 0 0 0 1 0 0
...............................................................................................TTCGAGTTATTATTCATAGTT................................................ 21 3 10 0.10 1 0 0 0 1 0 0
...........................................................................................TAAATTCTATTTCTTATACATAT.................................................. 23 3 13 0.08 1 0 1 0 0 0 0

Anti-sense strand reads

TACCATAGTCGTGAGACTAGGCGTAAGACAGCTGAGCGCAGTTGAAAGTCCACTCAAACTTTAACTTTACACATTTAACAAACACGGTTAAATTTAAGCTAAAGAATAAGTATCCACGTTATGGTCGACTAGAAGACGGACACCCACGACTGGAAGTTGGGGGA

**************************************************((((((..(((((((((.....(((((((.......)))))))..)))))))))..))))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droPer2 scaffold_1:4544348-4544511 + dpe_338 confident ATGGTATCAGCACTCTGATCCGCATTCTGTCGACTCGCGTCAACTTTCAGGTGAGTTTGAAATTGAAATGTGTAAATTGTTTG--TGCCAATTTAAATTCGATTTCTTATTCATAGGTGCAATACCAGCTGATCTTCTGCCTGTGGGTGCTGACCTTCAACCCCCT
dp5 4_group3:3057625-3057788 + dps-mir-1006 Known_mirbase ATGGTATCAGCACTCTGATCCGCATTCTGTCGACTCGCGTCAACTTTCAGGTGAGTTTGAAATTGAAATGTGTAAATTGTTTG--TGCCAATTTAAATTCGATTTCTTATTCATAGGTGCAATACCAGCTGATCTTCTGCCTGTGGGTGCTGACCTTCAACCCCCT
droWil2 scf2_1100000004521:1783936-1784101 + dwi_201 confident ATGGTATTAGCACATTGATTCGGATTCTGTCCACTCGTGTTAATTTCCAGGTGAGTTTGAAATTGAAATGCCTAAATTGTTTTGTGTACAATTTAAATTCGATTTCTTATTCATAGGTGCAATATCAATTAATTTTCTGCCTGTGGGTGCTCACATTCAATCCACT
droVir3 scaffold_12963:6536489-6536652 - dvi-mir-1006 Known_mirbase ATGGCATTAGCACTTTGATACGCATCCTGTCGACGCGTGTCAACTTTCAGGTGAGTTTGAAATTGAAATATGTAAATTGTTTG--GTACAATTTAAATTCGATTTCTTATTCATAGGTGCAATACCAGTTGATCTTCTGCCTGTGGGTGCTCACTTTTAATCCCTT
droMoj3 scaffold_6500:25691002-25691165 - dmo_156 confident ATGGCATCAGCACCTTGATACGCATCCTGTCGACGCGTGTCAACTTCCAGGTGAGTTTGAAATTGAAATGTGTAAATTGTTTG--GTACAATTTAAATTCGATTTCTTATTCATAGGTGCAATACCAGTTGATCTTCTGCCTGTGGGTGCTGACCTTCAATCCCCT
droGri2 scaffold_15252:9753499-9753662 - dgr_49 confident ATGGGATTAGCACGCTGACAAGGGTCCTGTCCACGCGCGTCAATTTCCAAGTGAGTTTGAAATTGAAATGTGTAAATTGTTTG--GTCCAATTTAAATTCGATTTCTTATTCATAGGTGCAATACCAGCTGATCTTCTGCCTGTGGGTGCTCACCTTTAATCCCCT
droAna3 scaffold_12943:3938290-3938453 + dan_317 confident ATGGCATTAGTACTTTGATCCGCATCCTGTCGACCCGTGTCAACTTCCAGGTGAGTTTGAAATTGAAATGCGTAAATTGTTTG--GTACAATTTAAATTCGATTTCTTATTCATAGGTCCAATACCAGCTGATCTTCTGCCTGTGGGTGCTGACCTTCAATCCCCT
droBip1 scf7180000395973:155816-155979 + ATGGCATCAGCACCCTGATCCGCATCCTGTCGACCCGTGTCAACTTCCAGGTGAGTTTGAAATTGAAATGTGTAAATTGTTTG--GTACAATTTAAATTCGATTTCTTATTCATAGGTGCAATACCAGTTGATCTTCTGCCTGTGGGTGCTGACCTTCAACCCCCT
droKik1 scf7180000302643:778995-779158 + ATGGTATCAGCACTCTGATCCGCATCCTGTCGTCGCGTGTCAACTTCCAGGTGAGTTTGAAATTGAAATGCGTAAATTGTTTG--GTACAATTTAAATTCGATTTCTTATTCATAGGTGCAATACCAGCTGGTCTTCTGCCTGTGGGTGCTGACCTTCAATCCCCT
droFic1 scf7180000454078:650932-651095 - ACGGAATCAGCACTCTGATCCGTATCCTCTCGACCCGTGTGAACTTCCAGGTGAGTTTGAAATTGAAATGCGTAAATTGTTTG--GTACAATTTAAATTCGATTTCTTATTCATAGGTGCAATACCAGTTGATCTTCTGCCTGTGGGTGCTGACCTTCAATCCCCT
droEle1 scf7180000490579:620087-620250 + ATGGAATCAGCACTCTGATTCGCATACTCTCGACCCGTGTCAACTTCCAGGTGAGTTTGAAATTGAAATGTGTAAATTGTTTG--GTACAATTTAAATTCGATTTCTTATTCATAGGTGCAATACCAGTTGATCTTCTGCCTGTGGGTGCTGACCTTCAATCCCCT
droRho1 scf7180000768553:40153-40316 - ACGGAATCAGCACTCTGATCCGCATCCTCTCGACTCGTGTTAACTTCCAGGTGAGTTTGAAATTGAAATGTGTAAATTGTTTG--GTACAATTTAAATTCGATTTCTTATTCATAGGTGCAATACCAGTTGATCTTCTGCCTATGGGTGCTGACCTTCAATCCCCT
droBia1 scf7180000301468:889328-889491 - ACGGCATCAGCACTCTGATCCGTATCCTCTCGACCCGTGTCAACTTCCAGGTGAGTTTGAAATTGAAATGCGTAAATTGTTTG--GTACAATTTAAATTCGATTTCTTATTCATAGGTGCAATACCAGCTGATCTTCTGCCTGTGGGTGCTGACCTTCAATCCCCT
droTak1 scf7180000415914:451724-451887 - ACGGCATCAGCACTCTGATCCGCATCCTCTCGACCCGCGTCAACTTCCAGGTGAGTTTGAAATTGAAATGCGTAAATTGTTTG--GTGCAATTTAAATTCGATTTCTTATTCATAGGTGCAATACCAGTTGATCTTCTGCCTGTGGGTGCTGACCTTCAATCCCCT
droEug1 scf7180000408961:299533-299696 - ATGGAATCAGCACTCTGATCCGCATCCTCTCGACCCGTGTCAACTTCCAGGTGAGTTTGAAATTGAAATATGTAAATTGTTTG--GTACAATTTAAATTCGATTTCTTATTCATAGGTGCAATACCAGTTGATCTTCTGTCTGTGGGTGCTGACCTTCAATCCCCT
dm3 chr2L:16724745-16724908 - dme-mir-1006 Known_mirbase ACGGAATCAGCACTCTGATCCGTATCTTGTCGACCCGTGTCAACTTCCAGGTGAGTTTGAAATTGAAATGCGTAAATTGTTTG--GTACAATTTAAATTCGATTTCTTATTCATAGGTGCAATACCAGTTGATCTTTTGCCTGTGGGTGCTGACCTTCAATCCCCT
droSim2 2l:16291454-16291617 - dsi-mir-1006 Known_mirbase ACGGAATCAGCACTCTGATCCGTATCCTGTCGACCCGGGTCAACTTCCAGGTGAGTTTGAAATTGAAATGCGTAAATTGTTTG--GTACAATTTAAATTCGATTTCTTATTCATAGGTGCAATACCAGTTGATCTTCTGCTTGTGGGTGCTGACCTTCAATCCCCT
droSec2 scaffold_7:371535-371698 - dse_186 confident ACGGAATCAGCACTCTGATCCGTATCCTGTCGACCCGGGTCAACTTCCAGGTGAGTTTGAAATTGAAATGCGTAAATTGTTTG--GTACAATTTAAATTCGATTTCTTATTCATAGGTGCAATACCAGTTGATATTCTGCCTGTGGGTGCTGACCTTCAATCCCCT
droYak3 2R:4378097-4378260 + dya_47 confident ACGGAATCAGCACTCTGATCCGTATCCTGTCCACTCGTGTCAACTTCCAGGTGAGTTTGAAATTGAAATGCGTAAATTGTTTG--GTACAATTTAAATTCGATTTCTTATTCATAGGTGCAATACCAGTTGATCTTCTGCCTGTGGGTGCTGACCTTCAATCCCCT
droEre2 scaffold_4845:19796310-19796473 - der_127 confident ACGGAATCAGCACTCTGATCCGTATCCTGTCGACCCGTGTCAACTTCCAGGTGAGTTTGAAATTGAAATGCGTAAATTGTTTG--GTACAATTTAAATTCGATTTCTTATTCATAGGTGCAATACCAGTTGATCTTTTGCTTGTGGGTGCTGACCTTCAATCCCCT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
ATGGTATCAGCACTCTGATCCGCATTCTGTCGACTCGCGTCAACTTTCAGGTGAGTTTGAAATTGAAATGTGTAAATTGTTTG--TGCCAATTTAAATTCGATTTCTTATTCATAGGTGCAATACCAGCTGATCTTCTGCCTGTGGGTGCTGACCTTCAACCCCCTSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
.............................................................................................TAAATTCGATTTCTTATTCATAG..................................................2311291.0012911511741870131
.............................................................................................TAAATTCGATTTCTTATTCAT....................................................211405.004050205696962
.............................................................................................TAAATTCGATTTCTTATTCATA...................................................221209.00209018611291
.............................................................................................TAAATTCGATTTCTTATTCATAGT.................................................241139.00139041143468
..................................................GTGAGTTTGAAATTGAAATGTGT.............................................................................................231136.00136040315114
..............................................................................................AAATTCGATTTCTTATTCATAG..................................................22196.00960960000
..................................................GTGAGTTTGAAATTGAAATGTGTAAA..........................................................................................26196.009601151475
.............................................................................................TAAATTCGATTTCTTATTCA.....................................................20163.006302702790
..................................................GTGAGTTTGAAATTGAAATGTGTA............................................................................................24145.00450111339
..................................................GTGAGTTTGAAATTGAAATGTGTAA...........................................................................................25122.00220100318
..............................................................................................AAATTCGATTTCTTATTCATAGT.................................................23121.00210110460
..............................................................................................AAATTCGATTTCTTATTCAT....................................................20120.00200181010
.............................................................................................TAAATTCGATTTCTTATTCATAGA.................................................24115.00150141000
..................................................GTGAGTTTGAAATTGAAATGTG..............................................................................................22113.0013020038
..................................................GTGAGTTTGAAATTGAAATGTGTAAAT.........................................................................................27112.0012000039
............................................................................................TTAAATTCGATTTCTTATTCATAG..................................................24112.00120120000
.......................ATTCTGTCGACTCGCGTC.............................................................................................................................18111.00111100000
..............................................................................................AAATTCGATTTCTTATTCATA...................................................21110.00100100000
.............................................................................................TAAATTCGATTTCTTATTCATAA..................................................2318.008080000
...............................................................................................AATTCGATTTCTTATTCATAG..................................................2117.007070000
.............................................................................................TAAATTCGATTTCTTATTCATAT..................................................2316.006030210
............................................................................................TTAAATTCGATTTCTTATTCAT....................................................2216.006040020
.....................................................................................................................................CTTCTGCCTGTGGGTGCT...............1815.005500000
............................................................................................TTAAATTCGATTTCTTATTCA.....................................................2115.005020300
...........................................................................................................................ACCAGCTGATCTTCTGCCTGTGGGTGCT...............2814.004400000
.............................................................................................TAAATTCGATTTCTTATTC......................................................1914.004000310
.......................ATTCTGTCGACTCGCGTCA............................................................................................................................1914.004400000
............CTCTGATCCGCATTCTGTCGACT...................................................................................................................................2314.004400000
.......................ATTCTGTCGACTCGCGTCAACT.........................................................................................................................2214.004400000
.............................................................................................TAAATTCGATTTCTTATTCATAAA.................................................2414.004040000
...........ACTCTGATCCGCATTCTGTCGACTCGC................................................................................................................................2713.003300000
.............TCTGATCCGCATTCTGTC.......................................................................................................................................1813.003300000
.....ATCAGCACTCTGATCCGC...............................................................................................................................................1813.003300000
...............................................................................................AATTCGATTTCTTATTCATAGT.................................................2213.003020010
.............................................................................................TAAATTCGATTTCTTATTCATATT.................................................2413.003000120
............................................................................................TTAAATTCGATTTCTTATTCATA...................................................2313.003010110
...............................................................................................AATTCGATTTCTTATTCAT....................................................1913.003020010
............................................................................................................................CCAGCTGATCTTCTGCCTGTGGGTGCT...............2713.003300000
..............................................................................................................................AGCTGATCTTCTGCCTGTGGGTGCT...............2513.003201000
..............................................................................................AAATTCGATTTCTTATTC......................................................1812.002020000
.......................ATTCTGTCGACTCGCGTCAA...........................................................................................................................2012.002200000
...........ACTCTGATCCGCATTCTGTCGACT...................................................................................................................................2412.002200000
.......CAGCACTCTGATCCGCATTCTGTCGA.....................................................................................................................................2612.002200000
............................................................................................TTAAATTCGATTTCTTATTCATAGT.................................................2512.002020000
.................................CTCGCGTCAACTTTCAGGT..................................................................................................................1912.002020000
.......CAGCACTCTGATCCGCATTCTGTCGACT...................................................................................................................................2812.002200000
..................................................GTGAGTTTGAAATTGAAATGTGTAAAA.........................................................................................2712.002000002
.......................................................................................................................CAATACCAGCTGATCTTCTGCCTGTGGGG..................2912.002200000
..................................................GTGAGTTTGAAATTGAAATGT...............................................................................................2112.002000011
...........................................................................ATTGTTTG--TGCCAATTTAAATTCGAT...............................................................2612.002200000
.............TCTGATCCGCATTCTGTCGACTCGCGT..............................................................................................................................2712.002200000
..............................................................................................AAATTCGATTTCTTATTCA.....................................................1912.002020000
.........GCACTCTGATCCGCATTCTGTCGAC....................................................................................................................................2512.002200000
............CTCTGATCCGCATTCTGTCGACTCGCGTC.............................................................................................................................2912.002200000
.......CAGCACTCTGATCCGCATTCT..........................................................................................................................................2112.002200000
.............TCTGATCCGCATTCTGTCGACT...................................................................................................................................2211.001100000
..............................................................................................AAATTCGATTTCTTATTCATAA..................................................2211.001010000
.............................................................................................TAAATTCGATTTCTTATTCATG...................................................2211.001010000
..............................................................................................AAATTCGATTTCTTATTCATAGA.................................................2311.001010000
..................................................................................................................................GATCTTCTGCCTGTGGGTGCTGACC...........2511.001010000
................................................................................................ATTCGATTTCTTATTCATAGT.................................................2111.001000010
....................................................GAGTTTGAAATTGAAATGTGTAAA..........................................................................................2411.001000100
.............................................................................................TAAATTCGATTTCTTATT.......................................................1811.001010000
............................................................................................................................CCAGCTGATCTTCTGCCTGTGGGTGCG...............2711.001100000
..................................................GTGAGTTTGAAATTGAAAT.................................................................................................1911.001000001
...................................................TGAGTTTGAAATTGAAATGTGT.............................................................................................2211.001000001
...............................................................................................................................................TGGGTGCTGACCTTCAACCC...2011.001010000
......................CATTCTGTCGACTCGCGT..............................................................................................................................1811.001100000
...................................................TGAGTTTGAAATTGAAATGTGTAAA..........................................................................................2511.001000001
.....ATCAGCACTCTGATCCGCATTCC..........................................................................................................................................2311.001100000
........AGCACTCTGATCCGCATTCTGTC.......................................................................................................................................2311.001100000
.............................................................................................TAAATTCGATTTCTTATTCATAGC.................................................2411.001001000
.................................................................................................TTCGATTTCTTATTCATAG..................................................1911.001010000
.................................................................AAATGTGTAAATTGTTTG--TGCCA............................................................................2311.001001000
.........GCACTCTGATCCGCATTCTGTC.......................................................................................................................................2211.001010000
................................ACTCGCGTCAACTTTCAGGTGCA...............................................................................................................2311.001010000
......................................................................................................................GCAATACCAGCTGATCTTCTGCCT........................2411.001100000
.....ATCAGCACTCTGATCCGCATTCT..........................................................................................................................................2311.001100000
...........ACTCTGATCCGCATTCTGTCGACTCGCGT..............................................................................................................................2911.001100000
...............................................................................................AATTCGATTTCTTATTCATA...................................................2011.001010000
................................................................................................ATTCGATTTCTTATTCATAG..................................................2011.001010000
.............................................................................................TAAATTCGATTTCTTATTCAG....................................................2111.001000100
..................................................................................................................................GATCTTCTGCCTGTGGGTGC................2011.001010000
............CTCTGATCCGCATTCTGTCGA.....................................................................................................................................2111.001001000
........................................................................................................................AATACCAGCTGATCTTCTGCCTGTGGGT..................2811.001100000
....................CGCATTCTGTCGACTCGCGTC.............................................................................................................................2111.001100000
..................................................................................................................................GATCTTCTGCCTGTGGGT..................1811.001010000
...................CCGCATTCTGTCGACTCG.................................................................................................................................1811.001100000
................................................................................................ATTCGATTTCTTATTCAT....................................................1811.001010000
...............................................................................................AATTCGATTTCTTATTCA.....................................................1811.001010000
.........GCACTCTGATCCGCATTCTGTCGACTC..................................................................................................................................2711.001100000
..............................................................................................AAATTCGATTTCTTATTCATAAT.................................................2311.001000100
.........GCACTCTGATCCGCATTCTGTCGA.....................................................................................................................................2411.001010000
...........................................................................ATTGTTTG--TGCCAATTTAAATTCGAC...............................................................2611.001100000
ATGGTATCAGCACTCTGATC..................................................................................................................................................2011.001100000
...................................................TGAGTTTGAAATTGAAATGTGTA............................................................................................2311.001010000
.......................................................................................................................CAATACCAGCTGATCTTCTGCCTGTGGGT..................2911.001100000
.......................................................................................................................................TCTGCCTGTGGGTGCTGACCTTCAACCCC..2911.001100000
..............................................................................................AAATTCGATTTCTTATTCATATT.................................................2311.001000010
.......CAGCACTCTGATCCGCAT.............................................................................................................................................1811.001100000
..................................................GTGAGTTTGAAATTGAAATG................................................................................................2011.001000001
............................................................................................TTAAATTCGATTTCTTATTC......................................................2011.001010000
............................................................................................................................CCAGCTGATCTTCTGCCTGTGGGTGCC...............2711.001100000
dp5
ATGGTATCAGCACTCTGATCCGCATTCTGTCGACTCGCGTCAACTTTCAGGTGAGTTTGAAATTGAAATGTGTAAATTGTTTG--TGCCAATTTAAATTCGATTTCTTATTCATAGGTGCAATACCAGCTGATCTTCTGCCTGTGGGTGCTGACCTTCAACCCCCTSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
.............................................................................................TAAATTCGATTTCTTATTCATAG..................................................2314656.004656242909644506112175826
.............................................................................................TAAATTCGATTTCTTATTCAT....................................................211965.009650735314215112101136
.............................................................................................TAAATTCGATTTCTTATTCATA...................................................221723.007230611352515282340
..............................................................................................AAATTCGATTTCTTATTCATAG..................................................221373.00373037300000000
.............................................................................................TAAATTCGATTTCTTATTCA.....................................................201306.0030612294123514020
.............................................................................................TAAATTCGATTTCTTATTCATAGT.................................................241300.003000168321124038351
.............................................................................................TAAATTCGATTTCTTATTCATAGA.................................................24197.009718165011020
..............................................................................................AAATTCGATTTCTTATTCAT....................................................20180.008008000000000
..................................................GTGAGTTTGAAATTGAAATGTGT.............................................................................................23171.00710283201226000
..................................................GTGAGTTTGAAATTGAAATGTGTAAA..........................................................................................26158.00580171304321000
..............................................................................................AAATTCGATTTCTTATTCATA...................................................21156.005605500010000
..............................................................................................AAATTCGATTTCTTATTCATAGT.................................................23145.004503032064000
............................................................................................TTAAATTCGATTTCTTATTCATAG..................................................24136.003603600000000
.............................................................................................TAAATTCGATTTCTTATTCATAA..................................................23130.003002901000000
............................................................................................TTAAATTCGATTTCTTATTCAT....................................................22127.002702013120000
..................................................GTGAGTTTGAAATTGAAATGTGTA............................................................................................24120.00200540326000
.............................................................................................TAAATTCGATTTCTTATTC......................................................19120.002001304030000
..............................................................................................AAATTCGATTTCTTATTCA.....................................................19119.001901900000000
...............................................................................................AATTCGATTTCTTATTCATAG..................................................21119.001901800010000
............................................................................................TTAAATTCGATTTCTTATTCA.....................................................21116.001601400020000
..................................................GTGAGTTTGAAATTGAAATGTGTAA...........................................................................................25115.00150810006000
..............................................................................................AAATTCGATTTCTTATTCATAGA.................................................23113.001301210000000
..................................................GTGAGTTTGAAATTGAAATGTG..............................................................................................22112.00120800220000
..................................................................................................TCGATTTCTTATTCATAG..................................................18111.001101100000000
............................................................................................TTAAATTCGATTTCTTATTCATA...................................................23111.00110911000000
..................................................GTGAGTTTGAAATTGAAATGTGTAAAT.........................................................................................2719.0090221004000
..................................................................................................................................GATCTTCTGCCTGTGGGTGCT...............2118.0080800000000
.............................................................................................TAAATTCGATTTCTTATTCATAGAA................................................2518.0080611000000
.............................................................................................TAAATTCGATTTCTTATTCAC....................................................2118.0080025010000
.................................................................................................TTCGATTTCTTATTCATAG..................................................1918.0080710000000
................................................................................................ATTCGATTTCTTATTCATAG..................................................2017.0070700000000
............................................................................................TTAAATTCGATTTCTTATTC......................................................2017.0070511000000
.............................................................................................TAAATTCGATTTCTTATTCATAGC.................................................2417.0070061000000
...............................................................................................AATTCGATTTCTTATTCATA...................................................2017.0070601000000
.............................................................................................TAAATTCGATTTCTTATTCATAAA.................................................2415.0050500000000
.............................................................................................TAAATTCGATTTCTTATTCATAT..................................................2315.0050202100000
...................................................TGAGTTTGAAATTGAAATGTGTA............................................................................................2314.0040300001000
.....................................................................................................................................CTTCTGCCTGTGGGTGCTGACCTT.........2414.0040310000000
.............................................................................................TAAATTCGATTTCTTATTCATAC..................................................2314.0040301000000
.............................................................................................TAAATTCGATTTCTTATT.......................................................1813.0030300000000
.................................................................................................TTCGATTTCTTATTCATA...................................................1813.0030300000000
..................................................................................................................................GATCTTCTGCCTGTGGGTGC................2013.0030300000000
................................................................................................ATTCGATTTCTTATTCATAGT.................................................2113.0030200010000
...............................................................................................AATTCGATTTCTTATTCAT....................................................1913.0030300000000
.............................................................................................TAAATTCGATTTCTTATTCATT...................................................2213.0030300000000
.............................................................................................TAAATTCGATTTCTTATTCAA....................................................2112.0020200000000
.........GCACTCTGATCCGCATTCTGTCGACT...................................................................................................................................2612.0020200000000
..............................................................................................AAATTCGATTTCTTATTCATT...................................................2112.0020200000000
...................................................TGAGTTTGAAATTGAAATGTGTAAA..........................................................................................2512.0020200000000
....................................................................................................................................TCTTCTGCCTGTGGGTGCT...............1912.0020200000000
................................................................................................................................CTGATCTTCTGCCTGTGGGTGCT...............2312.0020200000000
.........................................................................................................................ATACCAGCTGATCTTCTGCCTGTG.....................2412.0020200000000
...................................................TGAGTTTGAAATTGAAATGTGTAA...........................................................................................2412.0020100001000
..............................................................................................AAATTCGATTTCTTATTCATAGC.................................................2312.0020020000000
...............................................................................................AATTCGATTTCTTATTCATAGT.................................................2212.0020200000000
...................................................TGAGTTTGAAATTGAAATGTGTAAAT.........................................................................................2612.0020110000000
............................................................................................TTAAATTCGATTTCTTATTCATAT..................................................2412.0020100010000
..................................................GTGAGTTTGAAATTGAAATG................................................................................................2012.0020200000000
..................................................GTGAGTTTGAAATTGAAATGTGC.............................................................................................2312.0020011000000
................................................................................................ATTCGATTTCTTATTCATAGA.................................................2112.0020200000000
.............................................................................................TAAATTCGATTTCTTATTCATC...................................................2212.0020200000000
.................................................................................................TTCGATTTCTTATTCATAGT.................................................2012.0020200000000
..........................................................................................ATTTAAATTCGATTTCTTATTC......................................................2212.0020200000000
......................................................................................................................................TTCTGCCTGTGGGTGCTGACCTT.........2312.0020100100000
.............................................................................................TAAATTCGATTTCTTATTCATAGTA................................................2512.0020200000000
............................................................................................TTAAATTCGATTTCTTATTCATAGT.................................................2512.0020200000000
................................................................................................ATTCGATTTCTTATTCAT....................................................1812.0020200000000
.............................................................................................TAAATTCGATTTCTTATTCATAGAAA...............................................2621.5030300000000
............CTCTGATCCGCATTCTGTC.......................................................................................................................................1911.0010100000000
...............TGATCCGCATTCTGTCGACTCGCGT..............................................................................................................................2511.0010100000000
..................TCCGCATTCTGTCGACTCGC................................................................................................................................2011.0010100000000
.....................GCATTCTGTCGACTCGCGT..............................................................................................................................1911.0010100000000
.....ATCAGCACTCTGATCCGCA..............................................................................................................................................1911.0010100000000
.............TCTGATCCGCATTCTGTCGACTC..................................................................................................................................2311.0010100000000
................................................................................................................................CTGATCTTCTGCCTGTGGGTGC................2211.0010100000000
................................................................................................ATTCGATTTCTTATTCATA...................................................1911.0010100000000
............CTCTGATCCGCATTCTGTCGACT...................................................................................................................................2311.0010000100000
.............................................................................................TAAATTCGATTTCTTATTCATG...................................................2211.0010100000000
..................................................................................................................................GATCTTCTGCCTGTGGGTGCTGACCTT.........2711.0010100000000
.......................ATTCTGTCGACTCGCGTCAACT.........................................................................................................................2211.0010100000000
...............................GACTCGCGTCAACTTTCAGGT..................................................................................................................2111.0010100000000
..............................................................................................................................AGCTGATCTTCTGCCTGTGGGTGC................2411.0010100000000
..................................................................................................................................GATCTTCTGCCTGTGGGTGCTG..............2211.0010100000000
...............................................................................................AATTCGATTTCTTATTCATAGA.................................................2211.0010100000000
.................................................................................................................................TGATCTTCTGCCTGTGGGTGC................2111.0010100000000
...................................................TGAGTTTGAAATTGAAATGTG..............................................................................................2111.0010100000000
..............................CGACTCGCGTCAACTTTCAGGTGCA...............................................................................................................2511.0010100000000
..............................................................................................AAATTCGATTTCTTATTCATAAA.................................................2311.0010100000000
..............................................................................................AAATTCGATTTCTTATTC......................................................1811.0010100000000
................GATCCGCATTCTGTCGACT...................................................................................................................................1911.0010100000000
...................................................TGAGTTTGAAATTGAAATGTGTAAAA.........................................................................................2611.0010000001000
............................................................................................TTAAATTCGATTTCTTATTCATAC..................................................2411.0010100000000
.........................................................................................................................ATACCAGCTGATCTTCTGCCT........................2111.0010000100000
.............................................................................................TAAATTCGATTTCTTATTCATACC.................................................2411.0010100000000
...........ACTCTGATCCGCATTCTGTC.......................................................................................................................................2011.0010100000000
........AGCACTCTGATCCGCATTCTGTCGACT...................................................................................................................................2711.0010010000000
.............................................................................................TAAATTCGATTTCTTATTCATCTT.................................................2411.0010000010000
.................................................................................................TTCGATTTCTTATTCATAGAA................................................2111.0010100000000
...........................................................................................TTTAAATTCGATTTCTTATTC......................................................2111.0010010000000
........................................................TTGAAATTGAAATGTGTAAA..........................................................................................2011.0010100000000
..................................................GTGAGTTTGAAATTGAAAT.................................................................................................1911.0010000010000
.............................................................................................TAAATTCGATTTCTTATTCATACT.................................................2411.0010000010000
...................................................TGAGTTTGAAATTGAAATGTGT.............................................................................................2211.0010100000000
.............................................................ATTGAAATGTGTAAATTGTTTG--TGCCAAT..........................................................................2911.0010010000000
...................................................................................................................GGTGCAATACCAGCTGATC................................1911.0010100000000
............................................................................TTGTTTG--TGCCAATTTAAATTCG.................................................................2311.0010000010000
...GTATCAGCACTCTGATCCGCATTC...........................................................................................................................................2411.0010010000000
.................ATCCGCATTCTGTCGACTC..................................................................................................................................1911.0010100000000
........AGCACTCTGATCCGCATTCTGT........................................................................................................................................2211.0010010000000
...............................................................................................AATTCGATTTCTTATTCATAGTA................................................2311.0010100000000
................................................................GAAATGTGTAAATTGTTTG--TGCCA............................................................................2411.0010000100000
.......................................................................................................................CAATACCAGCTGATCTTCTG...........................2011.0010100000000
................GATCCGCATTCTGTCGACTCGC................................................................................................................................2211.0010100000000
....................CGCATTCTGTCGACTCGCGTC.............................................................................................................................2111.0010100000000
..............................CGACTCGCGTCAACTTTCAGGT..................................................................................................................2211.0010100000000
..................................................................................................................................GATCTTCTGCCTGTGGGT..................1811.0010100000000
.............................................................................................TAAATTCGATTTCTTATTCATAAAA................................................2511.0010100000000
.....ATCAGCACTCTGATCCGCATTCTGTCG......................................................................................................................................2711.0010100000000
.............................................................................................TAAATTCGATTTCTTATTCATAGG.................................................2411.0010100000000
...............................................................................................AATTCGATTTCTTATTCA.....................................................1811.0010100000000
......................................................................................................................GCAATACCAGCTGATCTTCTGCCTGTGG....................2811.0010010000000
..................................................GTGAGTTTGAAATTGAAATGTGTAAAC.........................................................................................2711.0010010000000
......................................................................................................................GCAATACCAGCTGATCTTCTGCC.........................2311.0010010000000
..................................................GTGAGTTTGAAATTGAAATGT...............................................................................................2111.0010000001000
................GATCCGCATTCTGTCGACTCG.................................................................................................................................2111.0010100000000
...............................................................................................................................GCTGATCTTCTGCCTGTGGGTGCT...............2411.0010100000000
............................................................................................TTAAATTCGATTTCTTATTCATAGA.................................................2511.0010100000000
..............................................................................................AAATTCGATTTCTTATTCATAA..................................................2211.0010100000000
.......................ATTCTGTCGACTCGCGTC.............................................................................................................................1811.0011000000000
..................................................................................................................................................GTGCTGACCTTCAACCCCCT2011.0010100000000
..................................................................................................TCGATTTCTTATTCATAGT.................................................1920.5010100000000
droWil2
ATGGTATTAGCACATTGATTCGGATTCTGTCCACTCGTGTTAATTTCCAGGTGAGTTTGAAATTGAAATGCCTAAATTGTTTTGTGTACAATTTAAATTCGATTTCTTATTCATAGGTGCAATATCAATTAATTTTCTGCCTGTGGGTGCTCACATTCAATCCACTSizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
.............................................................................................TAAATTCGATTTCTTATTCATAG..................................................2313053.00305317522986305269
.............................................................................................TAAATTCGATTTCTTATTCAT....................................................211995.0099536419644490
.............................................................................................TAAATTCGATTTCTTATTCATAGT.................................................241728.007282315415286250
.............................................................................................TAAATTCGATTTCTTATTCATA...................................................221407.004071128714464
..................................................GTGAGTTTGAAATTGAAATGCCTAAA..........................................................................................261347.003471176200123
..............................................................................................AAATTCGATTTCTTATTCATAG..................................................221216.002160216000
..................................................GTGAGTTTGAAATTGAAATGCCT.............................................................................................231195.00195219649110
.............................................................................................TAAATTCGATTTCTTATTCA.....................................................201165.0016521861057
..................................................GTGAGTTTGAAATTGAAATGCCTA............................................................................................24169.0069047499
.............................................................................................TAAATTCGATTTCTTATTCATAGA.................................................24163.00632380716
..................................................GTGAGTTTGAAATTGAAATGCCTAA...........................................................................................25150.0050033377
..............................................................................................AAATTCGATTTCTTATTCAT....................................................20142.0042038013
..................................................GTGAGTTTGAAATTGAAATGCCTAAAT.........................................................................................27139.00390173127
..............................................................................................AAATTCGATTTCTTATTCATA...................................................21135.0035035000
..................................................GTGAGTTTGAAATTGAAATGCCTAAAA.........................................................................................27134.00340002410
............................................................................................TTAAATTCGATTTCTTATTCATAG..................................................24127.0027420012
..................................................GTGAGTTTGAAATTGAAATGCC..............................................................................................22126.0026820412
............................................................................................TTAAATTCGATTTCTTATTCAT....................................................22124.0024010059
.............................................................................................TAAATTCGATTTCTTATTC......................................................19122.0022310009
...............................................................................................AATTCGATTTCTTATTCATAG..................................................21119.0019018100
..............................................................................................AAATTCGATTTCTTATTCATAGT.................................................23118.0018013032
.............................................................................................TAAATTCGATTTCTTATTCATAA..................................................23111.0011011000
............................................................................................TTAAATTCGATTTCTTATTCATAGT.................................................25110.001015022
............................................................................................TTAAATTCGATTTCTTATTCATA...................................................23110.001004042
..................................................GTGAGTTTGAAATTGAAATGC...............................................................................................2119.00900315
.................................................................................................TTCGATTTCTTATTCATAGT.................................................2018.00802015
..................................................GTGAGTTTGAAATTGAAATGCCTAAATT........................................................................................2817.00704300
.....ATTAGCACATTGATTCGGATTCTGTC.......................................................................................................................................2617.00750110
.................................................................................................TTCGATTTCTTATTCATAG..................................................1917.00707000
..............................................................................................AAATTCGATTTCTTATTCA.....................................................1917.00716000
................................................................................................ATTCGATTTCTTATTCATAG..................................................2017.00707000
..................................................................................................TCGATTTCTTATTCATAG..................................................1817.00707000
.............................................................................................TAAATTCGATTTCTTATTCATAT..................................................2316.00606000
...............................................................................................AATTCGATTTCTTATTCATAGT.................................................2216.00600033
............................................................................................TTAAATTCGATTTCTTATTCA.....................................................2116.00604002
................................................................................................ATTCGATTTCTTATTCATAGT.................................................2116.00604110
.........GCACATTGATTCGGATTCTGTCCACT...................................................................................................................................2615.00511201
..................................................GTGAGTTTGAAATTGAAA..................................................................................................1815.00500041
...............................................................................................AATTCGATTTCTTATTCAT....................................................1914.00403001
..................................................GTGAGTTTGAAATTGAAATGCCC.............................................................................................2314.00440000
.............ATTGATTCGGATTCTGTC.......................................................................................................................................1814.00440000
.................................................................................................TTCGATTTCTTATTCATA...................................................1813.00303000
.................................................................................................TTCGATTTCTTATTCATAGA.................................................2013.00302010
.............................................................................................TAAATTCGATTTCTTATTCATAGTA................................................2513.00320010
............CATTGATTCGGATTCTGTCCACT...................................................................................................................................2313.00302010
............................................................................................TTAAATTCGATTTCTTATTC......................................................2013.00301002
...............................................................................................AATTCGATTTCTTATTCA.....................................................1812.00201001
...............................................................................................................................ATTAATTTTCTGCCTGTGGGT..................2112.00200110
.........GCACATTGATTCGGATTCTGTCCACTCGT................................................................................................................................2912.00220000
...................................................TGAGTTTGAAATTGAAATGCCT.............................................................................................2212.00202000
............................................................................TTGTTTTGTGTACAATTTAAATTCGAT...............................................................2712.00220000
...............................CACTCGTGTTAATTTCCAGGTGCA...............................................................................................................2412.00201010
.............................................................................................TAAATTCGATTTCTTATTCATAGG.................................................2412.00211000
...................................................TGAGTTTGAAATTGAAATGCCTAA...........................................................................................2412.00202000
...................................................TGAGTTTGAAATTGAAATGCCTAAA..........................................................................................2512.00201100
.....ATTAGCACATTGATTCGG...............................................................................................................................................1812.00202000
............................................................................................TTAAATTCGATTTCTTATTCATAGA.................................................2512.00202000
.................................................................................................................................TAATTTTCTGCCTGTGGGT..................1912.00201010
.............................................................................................TAAATTCGATTTCTTATTCATAGC.................................................2412.00201001
.................................................................................................TTCGATTTCTTATTCATAGAGT...............................................2212.00200002
.............................................................................................TAAATTCGATTTCTTATT.......................................................1812.00211000
..............................................................................................AAATTCGATTTCTTATTCATAAA.................................................2312.00202000
..................................................GTGAGTTTGAAATTGAAATGCCTAAC..........................................................................................2612.00200002
............................................................................................TTAAATTCGATTTCTTATT.......................................................1912.00202000
..............................................................................................................................AATTAATTTTCTGCCTGTGG....................2012.00201010
.............................................................................................TAAATTCGATTTCTTATTCATAC..................................................2312.00202000
.............ATTGATTCGGATTCTGTCCACT...................................................................................................................................2212.00210100
...................................................TGAGTTTGAAATTGAAATGCCTA............................................................................................2312.00200020
.............................................................................................TAAATTCGATTTCTTATTCATAAA.................................................2412.00201010
.................................................................................................TTCGATTTCTTATTCATAGAA................................................2112.00200020
.........GCACATTGATTCGGATTCTGTC.......................................................................................................................................2212.00220000
.............................................................................................................................CAATTAATTTTCTGCCTGTGGGTGCT...............2612.00202000
.........................TCTGTCCACTCGTGTTAATTTCCAGGTG.................................................................................................................2811.00101000
..........CACATTGATTCGGATTCTGTCCACTCGT................................................................................................................................2811.00101000
..........CACATTGATTCGGATTCT..........................................................................................................................................1811.00100010
....................................................GAGTTTGAAATTGAAATGC...............................................................................................1911.00100010
.........GCACATTGATTCGGATTCTGG........................................................................................................................................2111.00110000
.............................................................................................TAAATTCGATTTCTTATTCC.....................................................2011.00101000
............CATTGATTCGGATTCTGTC.......................................................................................................................................1911.00101000
............CATTGATTCGGATTCTGT........................................................................................................................................1811.00100010
..................................................GTGAGTTTGAAATTGAAATGCCTT............................................................................................2411.00101000
...........ACATTGATTCGGATTCTGTCCACTCGT................................................................................................................................2711.00100100
.................ATTCGGATTCTGTCCACTCGTGT..............................................................................................................................2311.00100010
.........................................................................................AATTTAAATTCGATTTCTTATTC......................................................2311.00101000
...........................................................................................TTTAAATTCGATTTCTTATT.......................................................2011.00100010
........................................................................................................................................CTGCCTGTGGGTGCTCACATTCAAT.....2511.00100010
.......................................................................CTAAATTGTTTTGTGTACA............................................................................1911.00100001
.............................................................................................................................CAATTAATTTTCTGCCTGTGGGT..................2311.00100100
..................................................GTGAGTTTGAAATTGAAATGCCTAAATTG.......................................................................................2911.00100100
............................................................................................TTAAATTCGATTTCTTATTCATAT..................................................2411.00101000
.....................................................................................................................................TTTCTGCCTGTGGGTGCTCAC............2111.00101000
.........GCACATTGATTCGGATTCTG.........................................................................................................................................2011.00100010
...............................................................................................................................ATTAATTTTCTGCCTGTGG....................1911.00101000
.....................................................................GCCTAAATTGTTTTGTGTA..............................................................................1911.00100010
.................................................................................................TTCGATTTCTTATTCATAGGT................................................2111.00100001
..................................................GTGAGTTTGAAATTGAAAT.................................................................................................1911.00100010
............................................................................TTGTTTTGTGTACAATTTAAATTCG.................................................................2511.00101000
...........................TGTCCACTCGTGTTAATTTCCA.....................................................................................................................2211.00101000
........................................................................................................................AATATCAATTAATTTTCTGCCTGTG.....................2511.00101000
.......................................................................................................................................TCTGCCTGTGGGTGCTCACATTCAATC....2711.00101000
..................................................GTGAGTTTGAAATTGAAATGCCTAAAC.........................................................................................2711.00100010
..............................................................................................AAATTCGATTTCTTATTCATAGA.................................................2311.00101000
...........................................................................................................................ATCAATTAATTTTCTGCCTGTGG....................2311.00101000
.............................................................................................TAAATTCGATTTCTTATTCAA....................................................2111.00101000
...........ACATTGATTCGGATTCTGTCCACC...................................................................................................................................2411.00110000
.....ATTAGCACATTGATTCGGATT............................................................................................................................................2111.00110000
..................................................GTGAGTTTGAAATTGAAATG................................................................................................2011.00100100
..........................CTGTCCACTCGTGTTAATTTCCA.....................................................................................................................2311.00100010
.........................................................................................AATTTAAATTCGATTTCTTA.........................................................2011.00101000
..................................................GTGAGTTTGAAATTGAAATGCCG.............................................................................................2311.00110000
..................TTCGGATTCTGTCCACTCGTGTT.............................................................................................................................2311.00101000
.................ATTCGGATTCTGTCCACT...................................................................................................................................1811.00110000
.....ATTAGCACATTGATTCGGATTCT..........................................................................................................................................2311.00101000
................................ACTCGTGTTAATTTCCAGGT..................................................................................................................2011.00100010
.........................TCTGTCCACTCGTGTTAAT..........................................................................................................................1911.00101000
...........................................................................................TTTAAATTCGATTTCTTATTC......................................................2111.00101000
............CATTGATTCGGATTCTGTCC......................................................................................................................................2011.00110000
................................................................................TTTGTGTACAATTTAAATTCGATT..............................................................2411.00100010
..............................................................................................................................AATTAATTTTCTGCCTGTGGGT..................2211.00100010
...GTATTAGCACATTGATTCGGA..............................................................................................................................................2111.00100100
..........CACATTGATTCGGATTCTGTCCACT...................................................................................................................................2511.00101000
.......................................................................CTAAATTGTTTTGTGTAC.............................................................................1811.00100010
...................................................TGAGTTTGAAATTGAAATGCCTAAAT.........................................................................................2611.00100010
..............................................................................................AAATTCGATTTCTTATTCATG...................................................2111.00101000
................................................................................................ATTCGATTTCTTATTCAT....................................................1811.00101000
...................................CGTGTTAATTTCCAGGTGCA...............................................................................................................2011.00100010
............................GTCCACTCGTGTTAATTTCC......................................................................................................................2011.00100010
...................................................................................................................................ATTTTCTGCCTGTGGGTGCTCACA...........2411.00110000
.........................TCTGTCCACTCGTGTTAATTTCCAGG...................................................................................................................2611.00100010
...............................................................................................................................ATTAATTTTCTGCCTGTGGGTGCT...............2411.00100010
.........................................................................................................................ATATCAATTAATTTTCTGCCTG.......................2211.00110000
...........ACATTGATTCGGATTCTGTC.......................................................................................................................................2011.00110000
.......................ATTCTGTCCACTCGTGTTA............................................................................................................................1911.00100010
.................................CTCGTGTTAATTTCCAGGTGCA...............................................................................................................2211.00100010
.....................................................................................GTACAATTTAAATTCGATTTCTTATT.......................................................2611.00100010
..........CACATTGATTCGGATTCTGTCC......................................................................................................................................2211.00100010
.................................................................................................TTCGATTTCTTATTCATAGTA................................................2111.00101000
..............................................................................................AAATTCGATTTCTTATTCATAA..................................................2211.00101000
...............................CACTCGTGTTAATTTCCAGG...................................................................................................................2011.00100010
..............................................................................................................................AATTAATTTTCTGCCTGTGGGTGCT...............2511.00100010
.........GCACATTGATTCGGATTCTGTCCACTC..................................................................................................................................2711.00100100
......................................................GTTTGAAATTGAAATGCCTAAAT.........................................................................................2311.00101000
.................................CTCGTGTTAATTTCCAGGTG.................................................................................................................2011.00100010
.TGGTATTAGCACATTGATTCGGATTCT..........................................................................................................................................2711.00100100
................GATTCGGATTCTGTCCACTCGTGT..............................................................................................................................2411.00101000
.....ATTAGCACATTGATTCGGATTC...........................................................................................................................................2211.00100010
...............TGATTCGGATTCTGTCCACTCGTGTT.............................................................................................................................2611.00110000
........AGCACATTGATTCGGATT............................................................................................................................................1811.00110000
.............ATTGATTCGGATTCTGTCCACTCGTGT..............................................................................................................................2711.00100010
.........GCACATTGATTCGGATTCTGTCCA.....................................................................................................................................2411.00100010
..........CACATTGATTCGGATTCTGTCCAC....................................................................................................................................2411.00100100
...............................................................................................AATTCGATTTCTTATTCATA...................................................2011.00101000
..............................CCACTCGTGTTAATTTCCAGGTGCA...............................................................................................................2511.00100100
............................GTCCACTCGTGTTAATTTCCA.....................................................................................................................2111.00100010
droVir3
ATGGCATTAGCACTTTGATACGCATCCTGTCGACGCGTGTCAACTTTCAGGTGAGTTTGAAATTGAAATATGTAAATTGTTTG--GTACAATTTAAATTCGATTTCTTATTCATAGGTGCAATACCAGTTGATCTTCTGCCTGTGGGTGCTCACTTTTAATCCCTTSizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
.............................................................................................TAAATTCGATTTCTTATTCATAG..................................................2316716.00671610204609163100000102933213354422348531572993851121575523816317151486100001000000000001105434126118662066781276958888502026
.............................................................................................TAAATTCGATTTCTTATTCAT....................................................2114784.004784149100452000000046522415131544721724522701263448372122218902145137161369570000000010000002000116336015900111012100001
.............................................................................................TAAATTCGATTTCTTATTCATA...................................................2211660.00166001767455000000008937193646265382944230453565861768613682170000000000000000100028130164633053005220000
.............................................................................................TAAATTCGATTTCTTATTCATAGT.................................................2411364.00136403168127430000001672715344115328442134216670355822751119914681943000000010000011110245844725911228392232423611101
.............................................................................................TAAATTCGATTTCTTATTCA.....................................................201698.0069804259100000000003622142825200291913343912690000100100000000000001030020767005000212712426500000
..............................................................................................AAATTCGATTTCTTATTCATAG..................................................221450.00450004470000000000000000000000000110100000000000000000000000000000000000000000000000
.............................................................................................TAAATTCGATTTCTTATTCATC...................................................221277.002770012610100000000223118010201023402192601000008000000000000000000002300100000101100000
.............................................................................................TAAATTCGATTTCTTATTCATAGA.................................................241136.0013600675000000000040102000103124472300011100000000000000000000000115410223402000002
.............................................................................................TAAATTCGATTTCTTATTCATAGTC................................................251135.0013500920200000000010000322221102419322040000014000000000000011000000450100000253000000
..............................................................................................AAATTCGATTTCTTATTCAT....................................................20195.009500840000000000020012100200000101000100000000000000000000000000000000000000000000
.............................................................................................TAAATTCGATTTCTTATTC......................................................19186.008603340000000000071125704300010131200000000000000000000000000008000000001200000000
..............................................................................................AAATTCGATTTCTTATTCATA...................................................21168.006800680000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................TTAAATTCGATTTCTTATTCAT....................................................22167.0067121700000000000632110404201021310200011002000000000000000000001000000000000000000
..............................................................................................AAATTCGATTTCTTATTCATAGT.................................................23154.005402220000000000000011004200022210100001020000000000000000000000304000002101000000
.............................................................................................TAAATTCGATTTCTTATTCATAA..................................................23154.005400360000000000020000000002101020220200000000000000000000000000002000000010010000
..................................................GTGAGTTTGAAATTGAAATATGTAAA..........................................................................................26152.005200112030000000000241200200000000000000011000010010012010001210500200140000010000
.............................................................................................TAAATTCGATTTCTTATTCATAT..................................................23150.00500080000000000071328308300001010200000000000000000000000000001002000000000000000
..................................................GTGAGTTTGAAATTGAAATATGT.............................................................................................23136.003600301000000000012104101400000000000000010000000000000000000001700000000000000000
...............................................................................................AATTCGATTTCTTATTCATAG..................................................21136.003600330000000000010000000000001000000010000000000000000000000000000000000000000000
.............................................................................................TAAATTCGATTTCTTATTCATATT.................................................24131.00310000000000000071035214220000000000000011000000000000000000020000000000000000000
............................................................................................TTAAATTCGATTTCTTATTCATAG..................................................24129.002900240000000000000000000000000200100000000000000000000000000001001000000000000000
.............................................................................................TAAATTCGATTTCTTATTCATAAA.................................................24123.00230021000000000000000000001140000000212200000000000000000000000002110030000000000
..............................................................................................AAATTCGATTTCTTATTCA.....................................................19122.002200210000000000000000000000000000000000000000000000000000000001000000000000000000
..................................................GTGAGTTTGAAATTGAAATATGTAA...........................................................................................25122.002200100000000000000031400000000000000000000000000000000000000000100000020000000001
..................................................................................................TCGATTTCTTATTCATAG..................................................18121.002100190000000000000000000001000010000000000000000000000000000000000000000000000000
..................................................GTGAGTTTGAAATTGAAATATG..............................................................................................22119.00190141000000000000151000200000000000000001000000000000000000002100000000000000000
.............................................................................................TAAATTCGATTTCTTATT.......................................................18119.00190020000000000040103000300001210000000000000000000000000000002000000000000000000
.................................................................................................TTCGATTTCTTATTCATAG..................................................19118.001800150000000000000000000000010000001000000000000000000000000000010000000000000000
.............................................................................................TAAATTCGATTTCTTATTCATT...................................................22117.00170060000000000010101000100000201100000000000000000000000000000002100000000000000
.............................................................................................TAAATTCGATTTCTTATTCATAGAA................................................25117.00170041000000001010000000000000000020011000000000000000000000000000011000000000112
.............................................................................................TAAATTCGATTTCTTATTCATAGAAA...............................................26116.00160021000000000000000000000030000000011000000000000000000000000001032100000000001
............................................................................................TTAAATTCGATTTCTTATTCATA...................................................23115.001500120000000000010001000000100000000000000000000000000000000000000000000000000000
................................................................................................ATTCGATTTCTTATTCATAG..................................................20114.001400120000000000000000000001010000000000000000000000000000000000000000000000000000
............................................................................................TTAAATTCGATTTCTTATTCA.....................................................21112.00120050000000000010010000100000100100000000000000000000000000002000000000000000000
..................................................GTGAGTTTGAAATTGAAATATGTA............................................................................................24112.00120060000000000000100000100000000000000010000000000000000000000300000000000000000
..............................................................................................AAATTCGATTTCTTATTCATC...................................................21111.001100110000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................TAAATTCGATTTCTTATTCATAGC.................................................24111.00110024000000000030000000000000100000010000000000000000000000000000000000000000000
.............................................................................................TAAATTCGATTTCTTATTCATAGTA................................................25110.00100010000000000000001000000011000000001000000000000000000000000000000102000100001
..................................................GTGAGTTTGAAATTGAAATATGTAAAT.........................................................................................2719.0090051000000000000000000100000000000000000000000000000000000000200000000000000000
..................................................GTGAGTTTGAAATTGAAATAT...............................................................................................2119.0090000000000000000201001300000000001000000000000000000000000001000000000000000000
.......................ATCCTGTCGACGCGTGTC.............................................................................................................................1819.0092000000000000000000001000000000001000000000000000000000000000100000010012000000
.............................................................................................TAAATTCGATTTCTTATTCATAGTCC...............................................2619.0090000000000000001000000000000110500000001000000000000000000000000000000000000000
..............................................................................................AAATTCGATTTCTTATTCATAGA.................................................2319.0090080000000000000001000000000000000000000000000000000000000000000000000000000000
.....................GCATCCTGTCGACGCGTGT..............................................................................................................................1918.0080051000000000001000000000000000000000000000000000000000000010000000000000000000
..............................................................................................AAATTCGATTTCTTATTCATAGTC................................................2417.0070030000000000000000000000000100000000001000000000000000000000000000000002000000
.................................................................................................TTCGATTTCTTATTCATA...................................................1817.0070050000000000000010000000000010000000000000000000000000000000000000000000000000
............................................................................................TTAAATTCGATTTCTTATTCATC...................................................2317.0070060000000000000000000000000000000000000000000000000000000000000100000000000000
.........................................................................................................................ATACCAGTTGATCTTCTGCCT........................2117.0070000000000000000000000000000000000000000000000000000000001000000000002220000000
.............................................................................................TAAATTCGATTTCTTATTCAA....................................................2117.0070050000000000020000000000000000000000000000000000000000000000000000000000000000
...............................................................................................AATTCGATTTCTTATTCAT....................................................1917.0070050000000000010000000000000100000000000000000000000000000000000000000000000000
..................................................GTGAGTTTGAAATTGAAATG................................................................................................2016.0060000000002000000000000000000110000000000000000000000000000000000000002000000000
.........................................................................................................................ATACCAGTTGATCTTCTGCCTGTGGGT..................2716.0060010000000000000000000100000000000000000000000000000000000000000000002001100000
..................................................GTGAGTTTGAAATTGAAATATGTAAAA.........................................................................................2716.0060010000000000000000200100000000000000000000001001000000000000000000000000000000
.............................................................................................TAAATTCGATTTCTTATTCATAGTAA...............................................2616.0060010000000000000000000000002000000000000000000000000000000000000011000000000001
.............................................................................................TAAATTCGATTTCTTATTCATCC..................................................2316.0060010010000000000100000000000110100000000000000000000000000000000000000000000000
.............................................................................................TAAATTCGATTTCTTATTCATAGTCA...............................................2616.0060000000000000000000100000000210100000001000000000000000000000000000000000000000
...............................................................................................AATTCGATTTCTTATTCATA...................................................2015.0050040000000000000000000000001000000000000000000000000000000000000000000000000000
.............................................................................................TAAATTCGATTTCTTATTCC.....................................................2015.0050010000000000000000000100010000100000000000000000000000000001000000000000000000
.......................ATCCTGTCGACGCGTGTCA............................................................................................................................1915.0050000000000000000000000000000000000000000000000000000000000020100000001100000000
.................................................................................................TTCGATTTCTTATTCATAGT.................................................2015.0050010100000000010000000000000000000000000000000000000000000000000000010100000000
.....................GCATCCTGTCGACGCGTGTC.............................................................................................................................2015.0050022000000000000001000000000000000000000000000000000000000000000000000000000000
...............................................................................................AATTCGATTTCTTATTCATAGT.................................................2215.0050010000000000010000000001000000000000000000000000000000000001000010000000000000
.................................................................................................TTCGATTTCTTATTCATAGTCC...............................................2215.0050000000000000001000000000010100200000000000000000000000000000000000000000000000
..................................................GTGAGTTTGAAATTGAAA..................................................................................................1815.0050000000000000000010000000000000000000000000000000000000000000004000000000000000
..................................................GTGAGTTTGAAATTGAAATATGTAAATT........................................................................................2814.0040020000000000000010100000000000000000000000000000000000000000000000000000000000
..................................................GTGAGTTTGAAATTGAAATATGTAAATTGTTTG--GTACAATT.........................................................................4114.0040000000000000000000000000000000000000000000000100000000002100000000000000000000
..............................................................................................................................AGTTGATCTTCTGCCTGTGGGTGCT...............2514.0040010000000000000000000000000000000000000000000000000000000000000010001100000000
.............................................................................................TAAATTCGATTTCTTATTCATAC..................................................2314.0040020000000000000000000000000010000000000000000000000000000000100000000000000000
............................................................................................TTAAATTCGATTTCTTATTCATAGT.................................................2514.0040010000000000000001000000000000000000000000000000000000000000000000000200000000
......................CATCCTGTCGACGCGTGT..............................................................................................................................1814.0040000000000000000110000000000000000000000000000000000000000000100000000001000000
................................................................................................ATTCGATTTCTTATTCAT....................................................1814.0040010000000000000001101000000000000000000000000000000000000000000000000000000000
................................................................................................ATTCGATTTCTTATTCATA...................................................1914.0040030000000000000000000000010000000000000000000000000000000000000000000000000000
.........................................................................................................................ATACCAGTTGATCTTCTGCC.........................2014.0040200000000000000000000000000000000000000000000000000000000000000000000020000000
............................................................................................TTAAATTCGATTTCTTATTC......................................................2013.0030020000000000000000100000000000000000000000000000000000000000000000000000000000
.....ATTAGCACTTTGATACGC...............................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000003000000000
...............................................................................................AATTCGATTTCTTATTCA.....................................................1813.0030030000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................GATCTTCTGCCTGTGGGT..................1813.0030010000000000000000000000000000000000000000000000000000000010000000000100000000
.............................................................................................TAAATTCGATTTCTTATTCATATA.................................................2413.0030000000000000010000100100000000000000000000000000000000000000000000000000000000
.........................................................................................................................ATACCAGTTGATCTTCTGC..........................1913.0030010000000000000000000000000010000000000000000000000000000000000000001000000000
..................................................GTGAGTTTGAAATTGAAATA................................................................................................2013.0030020000000000000001000000000000000000000000000000000000000000000000000000000000
.............................................................................................TAAATTCGATTTCTTATTCATAGG.................................................2413.0030010000000000000000000010000000000000000000000000000000000001000000000000000000
.................................................................................................TTCGATTTCTTATTCATAGTC................................................2113.0030010000000000001000000000000000100000000000000000000000000000000000000000000000
......................CATCCTGTCGACGCGTGTC.............................................................................................................................1913.0030010000000000001000000000000000000000000000000000000000000000100000000000000000
...................................................TGAGTTTGAAATTGAAATATGTAAA..........................................................................................2513.0030020000000000000000000000000000000000000000000000000000000001000000000000000000
.............................................................................................TAAATTCGATTTCTTATTCATCA..................................................2313.0030000000000000000010000000000001000000000000000000000000000000000100000000000000
..............................................................................................AAATTCGATTTCTTATTC......................................................1812.0020020000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................ACCAGTTGATCTTCTGCCTGTGGGTGCT...............2812.0020000000000000000000000000000000000000000000000000000000000000000000000000200000
..............................................................................................AAATTCGATTTCTTATTCATCC..................................................2212.0020020000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................AGTTGATCTTCTGCCTGTGG....................2012.0020000000000000000000000000000000000000000000000000000000000000000000020000000000
.............................................................................................TAAATTCGATTTCTTATTCT.....................................................2012.0020020000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................TTAAATTCGATTTCTTATTCATAA..................................................2412.0020010000000000000000000000000000000010000000000000000000000000000000000000000000
.................................................................................................TTCGATTTCTTATTCATAGAA................................................2112.0020000000000000000000000000001000000000000000000000000000000000000000000010000000
...............................................................................................................................GTTGATCTTCTGCCTGTGGGT..................2112.0020000000000000010000000000000000000000000000000000000000000010000000000000000000
........................................................................................................................AATACCAGTTGATCTTCTGCC.........................2112.0020010000000000000000000000000000000000000000000000000000000000000000000001000000
...................................................TGAGTTTGAAATTGAAATATG..............................................................................................2112.0020020000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................ACCAGTTGATCTTCTGCCT........................1912.0020000000000000000000000000000000000000000000000000000000000000000000001100000000
.....................................................................................................................................CTTCTGCCTGTGGGTGCT...............1812.0020000000000000000000000000000000000000000000000000000000000000000000000020000000
..............................................................................................AAATTCGATTTCTTATTCATAA..................................................2212.0020020000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................TAAATTCGATTTCTTATTCATAGTAT...............................................2612.0020000000000000000000000000000000000010000000000000000000000000000000001000000000
............................................................................TTGTTTG--GTACAATTTAAATTCGATT..............................................................2612.0020010000000000000000000000000000100000000000000000000000000000000000000000000000
...................................................TGAGTTTGAAATTGAAATATGTAAAT.........................................................................................2612.0020010000000000000000000000000000000000000000000000000000000000100000000000000000
...............................................................................................................................GTTGATCTTCTGCCTGTGGGTGCT...............2412.0020002000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................ACCAGTTGATCTTCTGCCTGTGGGT..................2512.0020000000000000000000000000000000000000000000000000000000000000000000001010000000
.............................................................................................TAAATTCGATTTCTTATTCATAGCC................................................2512.0020000000000000000000000000000100100000000000000000000000000000000000000000000000
..............................................................................................AAATTCGATTTCTTATTCATAGTA................................................2412.0020000000000000000000000000000000000000000000000000000000000000000010000000000010
...........................................................................................................................ACCAGTTGATCTTCTGCCTGTGGGTGC................2712.0020002000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................ATTTAAATTCGATTTCTTATTC......................................................2212.0020020000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................TGAGTTTGAAATTGAAATATGTA............................................................................................2312.0020020000000000000000000000000000000000000000000000000000000000000000000000000000
......................CATCCTGTCGACGCGTGTCAACT.........................................................................................................................2312.0020000000000000001000000000000000000000000000000000000000000000000000010000000000
................................................................................................ATTCGATTTCTTATTCATAGT.................................................2112.0020000000000000010000000000000000100000000000000000000000000000000000000000000000
..................................................GTGAGTTTGAAATTGAAAT.................................................................................................1912.0020000020000000000000000000000000000000000000000000000000000000000000000000000000
.....................GCATCCTGTCGACGCGTGTCA............................................................................................................................2112.0020001000000000000000001000000000000000000000000000000000000000000000000000000000
..................................................................................................TCGATTTCTTATTCATAGT.................................................1912.0020010000000000010000000000000000000000000000000000000000000000000000000000000000
.............................................................................................TAAATTCGATTTCTTATTCATAAAA................................................2531.3340040000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................TTCGATTTCTTATTCATAGTCT...............................................2291.22110120000000000000001000000010001302000000000000000000000000000000000000000000000
.............................................................................................TAAATTCGATTTCTTATTCATG...................................................2211.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................AAATTCGATTTCTTATTCATAGTCC...............................................2511.0010000000000000000000000000000010000000000000000000000000000000000000000000000000
..............................................................................................AAATTCGATTTCTTATTCATAGAAA...............................................2511.0010000000000000000000000000000000000001000000000000000000000000000000000000000000
.........GCACTTTGATACGCATCCTGTCGACG...................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000001000000000
.............................................................................................TAAATTCGATTTCTTATTCATTT..................................................2311.0010000000000000000000000000000000000000000000000000000000000000000100000000000000
.............................................................................TGTTTG--GTACAATTTAAATTCGATT..............................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000010
.....................GCATCCTGTCGACGCGTGC..............................................................................................................................1911.0010001000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................TTCTGCCTGTGGGTGCTCACTT..........2211.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
..................TACGCATCCTGTCGACGCGT................................................................................................................................2011.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTGAGTTTGAAATTGAAATATGTC............................................................................................2411.0010000000000000000001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................TGATCTTCTGCCTGTGGGTGCTCACT...........2611.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
............CTTTGATACGCATCCTGTCGACGCGTGT..............................................................................................................................2811.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................TAAATTCGATTTCTTATTCATAGCAA...............................................2611.0010000000000000000000000000000000000000100000000000000000000000000000000000000000
.............................................................................................TAAATTCGATTTCTTATTCAC....................................................2111.0010000000000000000010000000000000000000000000000000000000000000000000000000000000
............................................................................................TTAAATTCGATTTCTTATTCATAAA.................................................2511.0010000000000000000000000000000000000100000000000000000000000000000000000000000000
.........................................................................................AATTTAAATTCGATTTCTTATT.......................................................2211.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
droMoj3
ATGGCATCAGCACCTTGATACGCATCCTGTCGACGCGTGTCAACTTCCAGGTGAGTTTGAAATTGAAATGTGTAAATTGTTTG--GTACAATTTAAATTCGATTTCTTATTCATAGGTGCAATACCAGTTGATCTTCTGCCTGTGGGTGCTGACCTTCAATCCCCTSizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
.............................................................................................TAAATTCGATTTCTTATTCATAG..................................................2314764.004764441342112126710
.............................................................................................TAAATTCGATTTCTTATTCAT....................................................211972.009727745501022219
.............................................................................................TAAATTCGATTTCTTATTCATAGT.................................................241819.0081933821359626069
.............................................................................................TAAATTCGATTTCTTATTCATA...................................................221705.007055954418813
..............................................................................................AAATTCGATTTCTTATTCATAG..................................................221469.0046946800010
.............................................................................................TAAATTCGATTTCTTATTCA.....................................................201178.00178146241187
.............................................................................................TAAATTCGATTTCTTATTCATC...................................................221174.0017416103334
.............................................................................................TAAATTCGATTTCTTATTCATAGA.................................................241117.0011795221170
..................................................GTGAGTTTGAAATTGAAATGTGTAAA..........................................................................................261117.00117194261670
..............................................................................................AAATTCGATTTCTTATTCAT....................................................20183.00838300000
..............................................................................................AAATTCGATTTCTTATTCATA...................................................21176.00767400020
..................................................GTGAGTTTGAAATTGAAATGTGT.............................................................................................23155.005551511033
.............................................................................................TAAATTCGATTTCTTATTCATAGTC................................................25147.004722021166
.............................................................................................TAAATTCGATTTCTTATTCATAGC.................................................24142.00423000390
..............................................................................................AAATTCGATTTCTTATTCATAGT.................................................23138.00382701091
..................................................GTGAGTTTGAAATTGAAATGTGTA............................................................................................24134.00345302024
..............................................................................................AAATTCGATTTCTTATTCATC...................................................21128.00282800000
...............................................................................................AATTCGATTTCTTATTCATAG..................................................21128.00282700010
.............................................................................................TAAATTCGATTTCTTATTCATAA..................................................23128.00282800000
..................................................GTGAGTTTGAAATTGAAATGTGTAA...........................................................................................25127.00275111118
............................................................................................TTAAATTCGATTTCTTATTCAT....................................................22118.00181500120
..............................................................................................AAATTCGATTTCTTATTCA.....................................................19117.00171700000
..............................................................................................AAATTCGATTTCTTATTCATAGA.................................................23115.00151500000
..................................................GTGAGTTTGAAATTGAAATGTGTAAAT.........................................................................................27115.00151000014
............................................................................................TTAAATTCGATTTCTTATTCATAG..................................................24115.00151500000
.............................................................................................TAAATTCGATTTCTTATTC......................................................19114.0014801410
..................................................................................................TCGATTTCTTATTCATAG..................................................18111.0011900020
..................................................GTGAGTTTGAAATTGAAATGTGTAAATT........................................................................................28111.0011500006
.................................................................................................TTCGATTTCTTATTCATAG..................................................1919.009810000
.............................................................................................TAAATTCGATTTCTTATTCATAAA.................................................2418.008700010
................................................................................................ATTCGATTTCTTATTCATAG..................................................2017.007700000
..................................................GTGAGTTTGAAATTGAAATGT...............................................................................................2116.006400002
...............................................................................................AATTCGATTTCTTATTCAT....................................................1916.006600000
...............................................................................................AATTCGATTTCTTATTCATA...................................................2016.006500010
..............................................................................................AAATTCGATTTCTTATTCATAA..................................................2216.006600000
............................................................................................TTAAATTCGATTTCTTATTCATC...................................................2316.006600000
..................................................GTGAGTTTGAAATTGAAATGTG..............................................................................................2216.006300111
.............................................................................................TAAATTCGATTTCTTATTCATAGAA................................................2516.006300030
...............................................................................................AATTCGATTTCTTATTCATAGT.................................................2216.006500010
..................................................................................................TCGATTTCTTATTCATAGT.................................................1915.005200030
.............................................................................................TAAATTCGATTTCTTATTCATT...................................................2215.005500000
.............................................................................................TAAATTCGATTTCTTATTCATAC..................................................2315.005100040
..............................................................................................AAATTCGATTTCTTATTCATAGTC................................................2415.005500000
............................................................................................TTAAATTCGATTTCTTATTCATA...................................................2314.004300010
.............................................................................................TAAATTCGATTTCTTATTCATAGTAA...............................................2614.004300010
.............................................................................................TAAATTCGATTTCTTATTCATATT.................................................2414.004002200
.............................................................................................TAAATTCGATTTCTTATTCAC....................................................2114.004000040
.............................................................................................TAAATTCGATTTCTTATTCATAT..................................................2314.004301000
.................................................................................................TTCGATTTCTTATTCATAGT.................................................2014.004100120
.....................GCATCCTGTCGACGCGTGT..............................................................................................................................1913.003300000
.................................................................................................TTCGATTTCTTATTCATAGA.................................................2013.003210000
.............................................................................................TAAATTCGATTTCTTATTCATCC..................................................2313.003300000
................................................................................................ATTCGATTTCTTATTCATAGT.................................................2113.003200100
.............................................................................................TAAATTCGATTTCTTATTCATAGTA................................................2513.003100110
...................................................TGAGTTTGAAATTGAAATGTGTAAA..........................................................................................2513.003300000
............................................................................................TTAAATTCGATTTCTTATTCA.....................................................2113.003300000
............................................................................................TTAAATTCGATTTCTTATTC......................................................2013.003300000
.................................................................................................TTCGATTTCTTATTCATAGTC................................................2132.006201120
.........................................................................................AATTTAAATTCGATTTCTTATT.......................................................2212.002200000
..............................................................................................AAATTCGATTTCTTATTCATAAA.................................................2312.002200000
.............................................................................................TAAATTCGATTTCTTATTCATAAAA................................................2512.002200000
............................................................................TTGTTTG--GTACAATTTAAATTCGATT..............................................................2612.002100001
.............................................................................................TAAATTCGATTTCTTATTCATAGAAA...............................................2612.002200000
..................................................GTGAGTTTGAAATTGAAATGTGTC............................................................................................2412.002000002
................................................................................................ATTCGATTTCTTATTCATAGTC................................................2212.002000020
.............................................................................................TAAATTCGATTTCTTATTCAA....................................................2121.503300000
.............................................................................................TAAATTCGATTTCTTATTCATCA..................................................2321.503300000
.....................GCATCCTGTCGACGCGTGTC.............................................................................................................................2011.001100000
..................................................GTGAGTTTGAAATTGAAATGTGC.............................................................................................2311.001000010
...................................................TGAGTTTGAAATTGAAATGTGT.............................................................................................2211.001100000
.................................................................................................TTCGATTTCTTATTCATA...................................................1811.001100000
..................................................GTGAGTTTGAAATTGAAAT.................................................................................................1911.001100000
..................................................................AATGTGTAAATTGTTTG--GTA..............................................................................2011.001000001
.............................................................................................TAAATTCGATTTCTTATTCATAGG.................................................2411.001000010
...........................................................................................TTTAAATTCGATTTCTTATT.......................................................2011.001100000
.............................................................................................TAAATTCGATTTCTTATTCATACT.................................................2411.001001000
........................................................................................CAATTTAAATTCGATTTCTTATTCATAG..................................................2811.001100000
................................................................................................ATTCGATTTCTTATTCATAGA.................................................2111.001000010
..................................................GTGAGTTTGAAATTGAAATGTGTAAAG.........................................................................................2711.001100000
...............................................................................................AATTCGATTTCTTATTCATAGTA................................................2311.001100000
..............................................................TTGAAATGTGTAAATTGTTTG--GTACAAT..........................................................................2811.001100000
...................................................................................................CGATTTCTTATTCATAGC.................................................1811.001000010
............................................................................................TTAAATTCGATTTCTTATT.......................................................1911.001100000
.....................GCATCCTGTCGACGCGTGTCA............................................................................................................................2111.001100000
.............................................................................................TAAATTCGATTTCTTATTCATAGAC................................................2511.001000010
....................................................GAGTTTGAAATTGAAATGTGTAAATT........................................................................................2611.001100000
............................................................................................TTAAATTCGATTTCTTATTCATAGA.................................................2511.001100000
................................................................................................ATTCGATTTCTTATTCAT....................................................1811.001000010
..................................................GTGAGTTTGAAATTGAAATGTGTAAAC.........................................................................................2711.001000010
....................................................................................................................................TCTTCTGCCTGTGGGTGCTGACCTTC........2611.001100000
..............................................................................................AAATTCGATTTCTTATTCATAGC.................................................2311.001000010
.....................................................AGTTTGAAATTGAAATGTGT.............................................................................................2011.001000001
..............................................................................................................................AGTTGATCTTCTGCCTGTGGG...................2111.001100000
.............................................................................................TAAATTCGATTTCTTATTCATATC.................................................2411.001000010
.............................................................................................TAAATTCGATTTCTTATTCATAGTCC...............................................2611.001100000
..............................................................................................AAATTCGATTTCTTATTCATAAT.................................................2311.001000010
..................................................................................................................................GATCTTCTGCCTGTGGGTGCTGACC...........2511.001100000
...................................................TGAGTTTGAAATTGAAATGTGTAA...........................................................................................2411.001100000
...................................................................................................................GGTGCAATACCAGTTGATCTTCTGCCTGT......................2911.001100000
.............................................................................................TAAATTCGATTTCTTATTCATG...................................................2211.001000010
......................CATCCTGTCGACGCGTGTCAACT.........................................................................................................................2311.001100000
...............................................................................................AATTCGATTTCTTATTCATAGA.................................................2211.001100000
.....................................................................................................................................CTTCTGCCTGTGGGTGCTGAC............2111.001100000
..................................................GTGAGTTTGAAATTGAAATGTGTAAATC........................................................................................2811.001000001
....................................................................................................................GTGCAATACCAGTTGATC................................1811.001100000
......................................................................TGTAAATTGTTTG--GTACA............................................................................1811.001100000
...............................................................................................AATTCGATTTCTTATTCATAT..................................................2111.001100000
..........................................................................................ATTTAAATTCGATTTCTTAT........................................................2011.001100000
........................TCCTGTCGACGCGTGTCA............................................................................................................................1811.001100000
...................................................TGAGTTTGAAATTGAAATGTGTAAAT.........................................................................................2611.001100000
.................................................................................................TTCGATTTCTTATTCATAGC.................................................2011.001000010
..................................................GTGAGTTTGAAATTGAAA..................................................................................................1811.001000010
...................................................................ATGTGTAAATTGTTTG--GTACAATT.........................................................................2411.001000001
..........................................................................................ATTTAAATTCGATTTCTTATTCATAG..................................................2611.001100000
................................................................GAAATGTGTAAATTGTTTG--GTACAA...........................................................................2511.001100000
droGri2
ATGGGATTAGCACGCTGACAAGGGTCCTGTCCACGCGCGTCAATTTCCAAGTGAGTTTGAAATTGAAATGTGTAAATTGTTTG--GTCCAATTTAAATTCGATTTCTTATTCATAGGTGCAATACCAGCTGATCTTCTGCCTGTGGGTGCTCACCTTTAATCCCCTSizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
.............................................................................................TAAATTCGATTTCTTATTCATAG..................................................231850.008508473
.............................................................................................TAAATTCGATTTCTTATTCATA...................................................221113.001131112
.............................................................................................TAAATTCGATTTCTTATTCAT....................................................211101.001011001
..............................................................................................AAATTCGATTTCTTATTCATAG..................................................22184.0084840
.............................................................................................TAAATTCGATTTCTTATTCATAGT.................................................24162.00624814
..............................................................................................AAATTCGATTTCTTATTCATA...................................................21121.0021210
..................................................GTGAGTTTGAAATTGAAATGTGTAAA..........................................................................................26114.001459
.............................................................................................TAAATTCGATTTCTTATTCATAGA.................................................24114.0014140
.............................................................................................TAAATTCGATTTCTTATTCA.....................................................20111.0011110
..................................................GTGAGTTTGAAATTGAAATGTGT.............................................................................................2319.00927
..............................................................................................AAATTCGATTTCTTATTCAT....................................................2019.00990
...............................................................................................AATTCGATTTCTTATTCATAG..................................................2115.00550
..............................................................................................AAATTCGATTTCTTATTCATAGT.................................................2315.00550
.............................................................................................TAAATTCGATTTCTTATTC......................................................1914.00440
...................................................TGAGTTTGAAATTGAAATGTGTAAA..........................................................................................2513.00330
..................................................GTGAGTTTGAAATTGAAATGTG..............................................................................................2213.00321
..................................................GTGAGTTTGAAATTGAAATGTGTAAAT.........................................................................................2713.00303
..................................................................................................TCGATTTCTTATTCATAG..................................................1813.00330
............................................................................................TTAAATTCGATTTCTTATTCATAG..................................................2413.00330
..................................................GTGAGTTTGAAATTGAAATGTGTAA...........................................................................................2513.00321
..................................................GTGAGTTTGAAATTGAAATGTGTAAAA.........................................................................................2712.00202
................................................................................................ATTCGATTTCTTATTCATAG..................................................2012.00220
.............................................................................................TAAATTCGATTTCTTATTCATAGTA................................................2512.00220
.............................................................................................TAAATTCGATTTCTTATTCATAA..................................................2312.00220
........AGCACGCTGACAAGGGTCCTGT........................................................................................................................................2211.00101
.............................................................................................TAAATTCGATTTCTTATTCATAT..................................................2311.00110
.............................................................................................TAAATTCGATTTCTTATT.......................................................1811.00110
.............................................................................................TAAATTCGATTTCTTATTCATAGC.................................................2411.00110
................................................................................................ATTCGATTTCTTATTCATA...................................................1911.00110
...................................................TGAGTTTGAAATTGAAATGTGT.............................................................................................2211.00101
..............................................................................................AAATTCGATTTCTTATTCATAGA.................................................2311.00110
..............................................................TTGAAATGTGTAAATTGTTTG--.................................................................................2111.00101
.............................................................................................TAAATTCGATTTCTTATTCATAC..................................................2311.00110
.............................................................................................TAAATTCGATTTCTTATTCATAGAA................................................2511.00110
.................................................................................................TTCGATTTCTTATTCATAGT.................................................2011.00110
.............................................................................................TAAATTCGATTTCTTATTCATAGCC................................................2511.00110
..................................................GTGAGTTTGAAATTGAAATGT...............................................................................................2111.00101
.................................................................................................TTCGATTTCTTATTCATAG..................................................1911.00110
.................................................................................................TTCGATTTCTTATTCATAGAA................................................2111.00110
..................................................GTGAGTTTGAAATTGAAATGTGTA............................................................................................2411.00101
.............................................................................................TAAATTCGATTTCTTATTCATAGAC................................................2511.00110
...............................................................................................AATTCGATTTCTTATTCATA...................................................2011.00110
.............................................................................................TAAATTCGATTTCTTATTCT.....................................................2011.00110
droAna3
ATGGCATTAGTACTTTGATCCGCATCCTGTCGACCCGTGTCAACTTCCAGGTGAGTTTGAAATTGAAATGCGTAAATTGTTTG--GTACAATTTAAATTCGATTTCTTATTCATAGGTCCAATACCAGCTGATCTTCTGCCTGTGGGTGCTGACCTTCAATCCCCTSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
.............................................................................................TAAATTCGATTTCTTATTCATAG..................................................231477.004773682956465
.............................................................................................TAAATTCGATTTCTTATTCAT....................................................211311.0031173102424180
.............................................................................................TAAATTCGATTTCTTATTCATAGT.................................................241177.0017726170292877
..................................................GTGAGTTTGAAATTGAAATGCGTAAA..........................................................................................26181.008121021264
.............................................................................................TAAATTCGATTTCTTATTCATA...................................................22179.007949827112
.............................................................................................TAAATTCGATTTCTTATTCA.....................................................20150.005010009031
..............................................................................................AAATTCGATTTCTTATTCATAG..................................................22140.00403910000
..................................................GTGAGTTTGAAATTGAAATGCGTAA...........................................................................................25124.00241122135
..................................................GTGAGTTTGAAATTGAAATGCGT.............................................................................................23123.00231102118
..............................................................................................AAATTCGATTTCTTATTCATAGT.................................................23119.0019800416
..................................................GTGAGTTTGAAATTGAAATGCGTA............................................................................................24117.00170101510
.............................................................................................TAAATTCGATTTCTTATTCATAGA.................................................24117.0017360107
..................................................GTGAGTTTGAAATTGAAATGCG..............................................................................................22116.00161000114
..............................................................................................AAATTCGATTTCTTATTCAT....................................................20114.0014810104
..................................................GTGAGTTTGAAATTGAAATGCGTAAAT.........................................................................................27113.0013100183
..................................................GTGAGTTTGAAATTGAAATGC...............................................................................................21113.00130100111
.............................................................................................TAAATTCGATTTCTTATTC......................................................1918.008100106
.............................................................................................TAAATTCGATTTCTTATTCAC....................................................2117.007060001
..............................................................................................AAATTCGATTTCTTATTCATA...................................................2117.007700000
...............................................................................................AATTCGATTTCTTATTCATAG..................................................2117.007700000
.............................................................................................TAAATTCGATTTCTTATTCATAGC.................................................2415.005050000
..................................................GTGAGTTTGAAATTGAAATGCGTAAAA.........................................................................................2715.005000005
..................................................................................................................................GATCTTCTGCCTGTGGGTGCT...............2114.004030010
..................................................................................................................................GATCTTCTGCCTGTGGGTGC................2014.004300010
.............................................................................................TAAATTCGATTTCTTATTCAA....................................................2113.003000003
..................................................GTGAGTTTGAAATTGAAA..................................................................................................1813.003010002
.................................................................................................TTCGATTTCTTATTCATAGT.................................................2013.003100101
.........GTACTTTGATCCGCATCCTGTC.......................................................................................................................................2213.003010020
...............................................................................................................................GCTGATCTTCTGCCTGTGGGT..................2112.002110000
............................................................................................TTAAATTCGATTTCTTATTCA.....................................................2112.002001001
............................................................................................TTAAATTCGATTTCTTATTCATAG..................................................2412.002100001
.....................................................................................................................................CTTCTGCCTGTGGGTGCTGACCTT.........2412.002200000
.....................GCATCCTGTCGACCCGTG...............................................................................................................................1812.002000002
..............................................................................................AAATTCGATTTCTTATTCA.....................................................1912.002100001
............................................................................................TTAAATTCGATTTCTTATTCAT....................................................2212.002100001
..............................................................................................AAATTCGATTTCTTATTC......................................................1812.002110000
.............................................................................................TAAATTCGATTTCTTATTCATAT..................................................2312.002000101
.....ATTAGTACTTTGATCCGCA..............................................................................................................................................1912.002200000
.............TTTGATCCGCATCCTGTC.......................................................................................................................................1811.001010000
............................GTCGACCCGTGTCAACTTCCAGGT..................................................................................................................2411.001100000
..............................................................................................AAATTCGATTTCTTATTCATATA.................................................2311.001100000
......................CATCCTGTCGACCCGTGT..............................................................................................................................1811.001001000
...................................................................................................................................ATCTTCTGCCTGTGGGTGCT...............2011.001010000
....CATTAGTACTTTGATCCGCATCCT..........................................................................................................................................2411.001010000
..GGCATTAGTACTTTGATCCGCATCCT..........................................................................................................................................2611.001000010
.................................................................................................................................TGATCTTCTGCCTGTGGGTGC................2111.001100000
.........................................................................................................................................TGCCTGTGGGTGCTGACCTTCAATC....2511.001010000
................................................................................................................................CTGATCTTCTGCCTGTGGGT..................2011.001001000
....................................................................................................................................TCTTCTGCCTGTGGGTGC................1811.001100000
............................................................................TTGTTTG--GTACAATTTAAATTCGATTT.............................................................2711.001000001
.............................................................................................TAAATTCGATTTCTTATTCATG...................................................2211.001100000
.........GTACTTTGATCCGCATCCTGTCGACCCGC................................................................................................................................2911.001010000
..........................................................................................................................TACCAGCTGATCTTCTGCCTGTGGGTGC................2811.001100000
.......................................................................................................................................TCTGCCTGTGGGTGCTGACC...........2011.001010000
..............................................................................................................................AGCTGATCTTCTGCCTGTGG....................2011.001100000
....................................................................................................................................TCTTCTGCCTGTGGGTGCTGACCC..........2411.001010000
.....ATTAGTACTTTGATCCGCAT.............................................................................................................................................2011.001100000
...........ACTTTGATCCGCATCCTGTCGA.....................................................................................................................................2211.001000010
..................................................GTGAGTTTGAAATTGAAATGCGTAAT..........................................................................................2611.001000100
............CTTTGATCCGCATCCTGTC.......................................................................................................................................1911.001010000
...............................................................TGAAATGCGTAAATTGTTTG--GTACAAT..........................................................................2711.001000010
..............................................................TTGAAATGCGTAAATTGTTTG--GT...............................................................................2311.001000010
....................................................................................................................................TCTTCTGCCTGTGGGTGCTGACC...........2311.001100000
.................ATCCGCATCCTGTCGACCCGTGTCA............................................................................................................................2511.001100000
.................................CCCGTGTCAACTTCCAGGT..................................................................................................................1911.001100000
................GATCCGCATCCTGTCGACCCGTGTC.............................................................................................................................2511.001010000
...............................................................................................AATTCGATTTCTTATTCATAGT.................................................2211.001000100
...GCATTAGTACTTTGATCCGCATCCT..........................................................................................................................................2511.001000010
.....ATTAGTACTTTGATCCGC...............................................................................................................................................1811.001100000
.............................................................................................TAAATTCGATTTCTTATTCATCT..................................................2311.001001000
...........ACTTTGATCCGCATCCTGTC.......................................................................................................................................2011.001100000
...GCATTAGTACTTTGATCCGCATCCTGTC.......................................................................................................................................2811.001100000
.............................................................................................TAAATTCGATTTCTTATTCATAGAAA...............................................2631.003030000
..............................................................................................AAATTCGATTTCTTATTCATAGA.................................................2311.001010000
..................................................GTGAGTTTGAAATTGAAATGCGTT............................................................................................2411.001000010
..............................................................................................AAATTCGATTTCTTATTCATAGAA................................................2411.001010000
.......................ATCCTGTCGACCCGTGTCAACTTCCA.....................................................................................................................2611.001010000
.........................................................................................................................ATACCAGCTGATCTTCTGCCTGTGGGT..................2711.001000010
...............................................................................................................................GCTGATCTTCTGCCTGTGGGTGCTGAC............2711.001100000
.....................................................................GCGTAAATTGTTTG--GTACAA...........................................................................2011.001100000
.............................................................................................TAAATTCGATTTCTTATTCATAC..................................................2311.001100000
....CATTAGTACTTTGATCCGCATCCTGTC.......................................................................................................................................2711.001100000
.....ATTAGTACTTTGATCCGCATC............................................................................................................................................2111.001100000
............................................................................................TTAAATTCGATTTCTTATTCATA...................................................2311.001100000
...............TGATCCGCATCCTGTCGACCCGTGTC.............................................................................................................................2611.001100000
..................................................GTGAGTTTGAAATTGAAATGCGTAAATT........................................................................................2811.001000010
............CTTTGATCCGCATCCTGTCGACCC..................................................................................................................................2411.001010000
..............................................................TTGAAATGCGTAAATTGTTTG--GTACA............................................................................2611.001000010
.........................................................................................................................ATACCAGCTGATCTTCTGC..........................1911.001100000
.............................................................................................TAAATTCGATTTCTTATTCAG....................................................2111.001000001
..GGCATTAGTACTTTGATCCGCATCC...........................................................................................................................................2511.001010000
...............................................................................................AATTCGATTTCTTATTCATA...................................................2011.001100000
............................................................................................TTAAATTCGATTTCTTATTCATAGT.................................................2511.001000010
.....................GCATCCTGTCGACCCGTGT..............................................................................................................................1911.001100000
.........GTACTTTGATCCGCATCCTGTCGACCC..................................................................................................................................2711.001010000
.............................................................................................TAAATTCGATTTCTTATTCATAGG.................................................2411.001100000
............................................................................................TTAAATTCGATTTCTTATTCATAGA.................................................2511.001100000
.............................................................................................TAAATTCGATTTCTTATTCATAGAA................................................2511.001010000
......................................................................................................................................TTCTGCCTGTGGGTGCTGA.............1911.001100000
.................................................................................................................................TGATCTTCTGCCTGTGGGTGCTGA.............2411.001100000
.............................................................................................TAAATTCGATTTCTTATTCATATT.................................................2430.672001001
..................................................................................................TCGATTTCTTATTCATAGT.................................................1920.501010000
..............................................................................................AAATTCGATTTCTTATTCATAA..................................................2230.331100000
.............................................................................................TAAATTCGATTTCTTATTCATAAA.................................................2430.331010000
.............................................................................................TAAATTCGATTTCTTATTCATAA..................................................2330.331010000
.................................................................................................TTCGATTTCTTATTCATAGTAT...............................................22110.091000001
droBip1
ATGGCATCAGCACCCTGATCCGCATCCTGTCGACCCGTGTCAACTTCCAGGTGAGTTTGAAATTGAAATGTGTAAATTGTTTG--GTACAATTTAAATTCGATTTCTTATTCATAGGTGCAATACCAGTTGATCTTCTGCCTGTGGGTGCTGACCTTCAACCCCCTSizeHit CountTotal NormTotal
No Reads
droKik1
ATGGTATCAGCACTCTGATCCGCATCCTGTCGTCGCGTGTCAACTTCCAGGTGAGTTTGAAATTGAAATGCGTAAATTGTTTG--GTACAATTTAAATTCGATTTCTTATTCATAGGTGCAATACCAGCTGGTCTTCTGCCTGTGGGTGCTGACCTTCAATCCCCTSizeHit CountTotal NormTotal
No Reads
droFic1
ACGGAATCAGCACTCTGATCCGTATCCTCTCGACCCGTGTGAACTTCCAGGTGAGTTTGAAATTGAAATGCGTAAATTGTTTG--GTACAATTTAAATTCGATTTCTTATTCATAGGTGCAATACCAGTTGATCTTCTGCCTGTGGGTGCTGACCTTCAATCCCCTSizeHit CountTotal NormTotal
No Reads
droEle1
ATGGAATCAGCACTCTGATTCGCATACTCTCGACCCGTGTCAACTTCCAGGTGAGTTTGAAATTGAAATGTGTAAATTGTTTG--GTACAATTTAAATTCGATTTCTTATTCATAGGTGCAATACCAGTTGATCTTCTGCCTGTGGGTGCTGACCTTCAATCCCCTSizeHit CountTotal NormTotal
No Reads
droRho1
ACGGAATCAGCACTCTGATCCGCATCCTCTCGACTCGTGTTAACTTCCAGGTGAGTTTGAAATTGAAATGTGTAAATTGTTTG--GTACAATTTAAATTCGATTTCTTATTCATAGGTGCAATACCAGTTGATCTTCTGCCTATGGGTGCTGACCTTCAATCCCCTSizeHit CountTotal NormTotal
No Reads
droBia1
ACGGCATCAGCACTCTGATCCGTATCCTCTCGACCCGTGTCAACTTCCAGGTGAGTTTGAAATTGAAATGCGTAAATTGTTTG--GTACAATTTAAATTCGATTTCTTATTCATAGGTGCAATACCAGCTGATCTTCTGCCTGTGGGTGCTGACCTTCAATCCCCTSizeHit CountTotal NormTotal
No Reads
droTak1
ACGGCATCAGCACTCTGATCCGCATCCTCTCGACCCGCGTCAACTTCCAGGTGAGTTTGAAATTGAAATGCGTAAATTGTTTG--GTGCAATTTAAATTCGATTTCTTATTCATAGGTGCAATACCAGTTGATCTTCTGCCTGTGGGTGCTGACCTTCAATCCCCTSizeHit CountTotal NormTotal
No Reads
droEug1
ATGGAATCAGCACTCTGATCCGCATCCTCTCGACCCGTGTCAACTTCCAGGTGAGTTTGAAATTGAAATATGTAAATTGTTTG--GTACAATTTAAATTCGATTTCTTATTCATAGGTGCAATACCAGTTGATCTTCTGTCTGTGGGTGCTGACCTTCAATCCCCTSizeHit CountTotal NormTotal
No Reads
dm3
ACGGAATCAGCACTCTGATCCGTATCTTGTCGACCCGTGTCAACTTCCAGGTGAGTTTGAAATTGAAATGCGTAAATTGTTTG--GTACAATTTAAATTCGATTTCTTATTCATAGGTGCAATACCAGTTGATCTTTTGCCTGTGGGTGCTGACCTTCAATCCCCTSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
.............................................................................................TAAATTCGATTTCTTATTCATAG..................................................23124306.00243060000180033303322002000116001192731846921011235521922533461019347300000100000000000000000145145108106623821216314551163701250224020196321194045825622467121612836101106111172522166223027234132000041041330121730828102115433720160110035000606781184011084120528283371113911105057005515340003027000001800000000671941124941818842952103620999149573521240000112017103434423419377241859331942431434444476012548834133351434122718211383228719813247775192114129320282551134895820674229076716143334138414010890616
.............................................................................................TAAATTCGATTTCTTATTCAT....................................................21116818.0016818000073000000112002001100600142101948851521122543327133580411253444000010000000000000000001091118794810100011282068134816140058110717202361183000206121203742333259291277234183160000000002006018161441865128400000578921408161580087942229561215181186611063130331005822927620002703000000090000001048260142742052805015443981050012600009102263705969183210115622615332518419383219701214229598830111141103520759472224271554932515415517623221301023122623691010131614135123313924816150762194114613702421101040
.............................................................................................TAAATTCGATTTCTTATTCATAGT.................................................2417875.0078750000000001001300000002100013000000006106050193451131411311352115000000000000000000000001919131302051005104201334102430527141400321007202042401411580000000000067061637144996017272913000002300205245504100527027125138706430515956000504000000716001000401983732171902194041392967419693091000016205511111214437411212815416218364191031091171114452410124561136199578531956154159371354855334351433732351753921239261925727211408291192271011533445426463155825134725212138153981510
.............................................................................................TAAATTCGATTTCTTATTCATA...................................................2217863.00786300004001000003200000011300004712517602102301011111181251415520000000000000000000000040341832310430101420411062381310318533229221841202501212333703502883639317105670000020010011002123551323030010080909022439703991055195101325218227313006009524630004010000005300000036355301678254673126437127875970192100010046322225121717319993161821321226327385474490351111664371765215423531873253549273101415763102223022506153921030602190213311545195037230
..................................................GTGAGTTTGAAATTGAAATGCGTAAA..........................................................................................2613520.003520000000000000000000001110000000000000201101010001012200001400000000000000000000220450100000300030100010000100000100003202010106010200000101000211100124746321140000000000024260190001021402301830000013276000011600000020113000001003418342961446311431331008000011313143131434331398275411636415919209619633133473133023203301017171224758983574220830137247324107182411796648192436295413320687376827154474625162573160
.............................................................................................TAAATTCGATTTCTTATTCA.....................................................2012577.0025770000100000000020000010100000127283121000010120000001200000000000000000000000001919116400000270121005250012180415150000000322012010061504448943000000000000000010003000000000400140141300014210269327612340205300400870200000000000000000000001001010113122332118250018000010025133731162240221409026012724317161610070002011833383225664901115701002100210011700001000004171002039192080
.............................................................................................TAAATTCGATTTCTTATTCATAGA.................................................2411161.001161000010000001000000000000000000000000101000010010010000000000000000000000000043231000000200100120000006002330000000008100000201317150000000000000000000000400000000000002143022001312201130140000003000000000000000000000000000020071347023057222622913001314800000110230131201011000020000103110021501150130113012301001011000000000006000001011004102100610720
..................................................GTGAGTTTGAAATTGAAATGCGTAA...........................................................................................251899.008990000000000000000000011000000100000000000001200102000100045000000000000000000002120002000001101111000100111000011010000000000010210000200000021701323161001000000000005908001101413163010102102000000440000010500000030449141119173251500021000210002220000110011032221211642743072423218051472742537213736371862142272154303371150105722336160916657366321540
..................................................GTGAGTTTGAAATTGAAATGCGT.............................................................................................231745.00745000000000000000000000000004020000000100001100000202000000310000000000000000031411001000000100101300002000100001000004000020303042000000000000100040133003000000005300111607104715310016100021064221010002000000020000007062226547101443500010000000011161300140001141214413436132211012260153309375106135120421239455801082820532543111913491811145949718180
..................................................GTGAGTTTGAAATTGAAATGCGTA............................................................................................241642.0064200000000000000000000000000003001000000000001001000000000100000000000000000001002006002010011000000000000110001200010110000000010400000010000100015233400000000000110002705102100320230200001123000035000000310000001052221170117916400020000210000121010030001021024121131031001700080206223143351125014441321734210081225298427233279311010921647543730
..............................................................................................AAATTCGATTTCTTATTCATAGT.................................................231403.0040300000000000000000000000000100000000020000021001040200000000000000000000000002103000000000000000000000000000000000000100000000100000000000000010001111300360000000000025040004080304000000200000000000000000200000000001001221223811183004000020000131011101012106021102070794110221343006102615330364323022023300020181028400121300010131111550
.............................................................................................TAAATTCGATTTCTTATTC......................................................191370.003700000000000000000000000000000324930000000000000000000000000000000000000000000741030000000100000010000000000000000000006201000007201370136000001000000000000000000001000002251018103102432112010400050010000000000000000000000000110001100003001000000002200012001201101032000040322101000010002003411590000010000000001000000000000000310000224000
..................................................GTGAGTTTGAAATTGAAATGCG..............................................................................................221323.0032300000000000000000000000000002000000000000000000000000000000000000000000000000000020000000000000100000001010030000100000000010101000000010000000000000000200000000000034030062102000000020200400100120000000100010070500000104000210010000000001010020000011000001100358111100180500010263455413125261000303404272121141128202071561663112140
............................................................................................TTAAATTCGATTTCTTATTCAT....................................................221273.00273000000000000000003000000000000105100000000000000100100000000000000000000000002452000001000000000000000500000020000000200200010001030000000000000001110000000000000000001217024003601009012000000500000000000000000000000000000002241400111200300000000102100200001001110000001024110170009011040532530011010000000001000101000000000200000001220
.............................................................................................TAAATTCGATTTCTTATTCATAT..................................................231258.00258000000000000000000000000001000000000000003000000001000000000000000000000000010110161203010400020100010003120100000008100000102121516000000000002100100212000000000300000161701800070101000001001000000000000000010000000000000001510014000001000002131411202000760909102002023100010005000000200010000000000000000000000000010000000000000000
..............................................................................................AAATTCGATTTCTTATTCATAG..................................................221242.0024200000000000100000000000000000000000000000000000100000000000000000000000000005342000000000000001000001100000100000000120201000001200000000000000001000000000000000000026240270001113060200000000000000000000000000000000000100821016621050000000000000010000000100000000000000000000010000010010000010000100000000000000000000000000000000000000
..............................................................................................AAATTCGATTTCTTATTCAT....................................................201225.0022500000000000000000000000000001000000000000000000000000000000000000000000000001123000000100000000000000000000000000000500000010103700000000000000000000000000000000000014350190031101211903400000012101000000000000000000000000000000110002000200000001001100100000110100001011200300310001000000212010000100000000000000000000000000000000021100
.............................................................................................TAAATTCGATTTCTTATTCATAA..................................................231198.00198000010000000002000000000000000000000000000000000000000000000000000000000000002000200002000130200000000005600100100700000000101032000000000000000000000000000000000000715011000402040000000010000000000000000000000000000000511182020035000112000000000000000000010000001001001000100000100020200000002000000100000002000000000000000000001100
..................................................GTGAGTTTGAAATTGAAATGCGTAAAT.........................................................................................271159.00159000000000000000000000010000000000000100000100000100000000000000000000000000000000000000000000000000000031000000000000100000000000000000102002100000100103000000000000320000010101000000001000001000100000000000000000000083741059600000000200000000000001000000000000100000004000001100000100001002111112000010911025101210201122000200300
............................................................................................TTAAATTCGATTTCTTATTCATAG..................................................241154.00154000000000000000000000000000000000000000100000000100000000000000000000000000001110000000000000010000000000000000000000000000000021000000000000000000000200000000000000110020003010000000000000000000000000000000000000001001241829110737000000000000000000000000000000000000000010000000010010000110000000000000000000000000000000000000011000
...............................................................................................AATTCGATTTCTTATTCATAGT.................................................221108.001080000000000000000000001000000000000000000000000010110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000300000001001000000000000300000000100000002210007100200000000001000000100020200100002003110180217011051301000301100001010100002201002011101000000011310
..................................................GTGAGTTTGAAATTGAAATGCGTAAAA.........................................................................................271107.00107000000000000000000000000000000000000000000010000201000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000210100020001010000000001000000000000041000000000100001011110000000000000000000000100110010012002004000020002000011000108000002225010000016509000150400111003110200
............................................................................................TTAAATTCGATTTCTTATTCATA...................................................231102.0010200000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000010000000000000000100001100000000000000000000000000000000000063050012230405000000200000000000000000000000000000005031322214100300000000210011001100010000000000000000120000001000001100000000101000000001100000000000000000000000
..................................................GTGAGTTTGAAATTGAAATGC...............................................................................................21193.0093000000000000000000000000000020000000000000000000000000000000000000000000000001000000000000000000100000000000000000000000011000000000000100000000000000000000000000000110000000022061000100200000000000000000000000121000110110001002000001000020110101100011000123000020021020001000102020200010100000010111002210000121001502100012100
...................................................TGAGTTTGAAATTGAAATGCGTAAA..........................................................................................25187.0087000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000001000000000000000000000000001100000000000000000000200000000000000100030021015012000000000000010100000000100020011003000000120011113020010001100000213102001122125401200101200210110100
..............................................................................................AAATTCGATTTCTTATTCATA...................................................21183.0083000000000000000000000000000000000000000000000000000000000000000000000000000020030000000000000000000000000000000000000101000001001000000000000000010000000000000000000590900050306080000000000000000000000000000000000000001561104000200000000010000000000000000000000002000110000000000100000000000000000000000000000000000000000002000
..................................................GTGAGTTTGAAATTGAAATG................................................................................................20180.008000000000000000000000000000000000007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000010000000000000000000000000036010100001000000000000000000100000000001010003000021000000100010000100000100001602601001120000020020200010000000000000
.............................................................................................TAAATTCGATTTCTTATTCATAAA.................................................24176.0076000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000100000000040000000000000000000000000000000000000013141064325000000000000000000010000000000000000000000020000000000000000000000000000000000000000000000000000000000
.............................................................................................TAAATTCGATTTCTTATT.......................................................18168.0068000000000000000000000000000132220000000000000000000000000000000000000000000000120000000100000000000000000000000000000000000000433002200000000000000000000000000000000050211022243103000002000000000000000000000000000000000100000200000000000000000000000000000000001002000000000000010000310000000000000000000100000000000000000000000
..................................................GTGAGTTTGAAATTGAAAT.................................................................................................19164.00640000000000000000000001000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000001000000000000000000000000000000005100300070001060001000100000000000000000000000000000100010001000000000000001000000000000000000001122100000010010000000001000010101001010200010010100000010200000000
............................................................................................TTAAATTCGATTTCTTATTCA.....................................................21161.00610000000000000000000000000000003100000000000000000100000000000000000000000000000100000000000000000000000000200000000000000000001000000000000000000000000000000001000005205001103020200011001000000000000000000000000000000000010002000000000000000001000000000000000000021000100000020000000220000000000000000000100000000000000001011000
.............................................................................................TAAATTCGATTTCTTATTCATAGC.................................................24154.00540000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000010200000000000000000001000000000000000001000000001000000000000000000000000000000000000000000002711010001000000000000100000000000000000000010000110002001030320000100001000110000101000100010100000000001000
.................................................................................................TTCGATTTCTTATTCATAGT.................................................20153.0053000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012000000000000000100000000000020000000000000000000000000000000000000000000000200300001000000100000000100000100002104100030001022000010000000000001401000001004100020110000010002020
...................................................TGAGTTTGAAATTGAAATGCGTA............................................................................................23151.0051000000000000000000000000000000000000000000000010000000000000000000000000000000000000002000000000000000001100000000000000000000000000000000000000000000020000000000000000000000000000010000000000000000000001000000300030010000010100000000000010000000100000010000000001001010101010100010000100111121010100111012100000000000010210010
.............................................................................................TAAATTCGATTTCTTATTCATATT.................................................24248.50970000000000000000000000000010000000000000040001301010200000000000000000000000000001000000002000000000000001000000100000000000000100000000000000011352010010000000300001000100000000000012000100000000200000030000000010000000000000300100000000000110000000250613000002013000001000000020700000000000000000000000000000010000000000000000
.............................................................................................TAAATTCGATTTCTTATTCATAGAA................................................25148.0048000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000001000000001112000000000000000000000000000000000000210000120301010000000000000000000000000000000000000000481027400011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200
.............................................................................................TAAATTCGATTTCTTATTCATAGG.................................................24146.0046000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000020000000001040000000000000000000000000000000000000000000001000000000000000000000000000000000001000000120001103088600110000000000010000000000000000000000000000030
................................................................................................ATTCGATTTCTTATTCATAGT.................................................21143.0043000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000100040000000000000000000000000000000100000000000000100200000000000000100000000001001000000000040025001010410000110001001001000003101000100000000000000100
.............................................................................................TAAATTCGATTTCTTATTCAG....................................................21140.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000002000001000130140000002000000000000000000000000000000000100000000000000000000000000000100000000000000000100010000100101000000000000000000000000000000000000000000000
.............................................................................................TAAATTCGATTTCTTATTCATAC..................................................23139.0039000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000000000000460300020000000000000000000000000000000000000000000000320013100000000000000000100000030100000000000000000001000010010100001000000000000000000000000000000000001000
.............................................................................................TAAATTCGATTTCTTATTCATC...................................................22134.0034000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004100010005076000000000000000000000000000000000000200000000000010000002000000000000000000000000000000000000010000000000000010000000000010000001000000000000000000000000000000000000000000000000000000000000000001000
...................................................TGAGTTTGAAATTGAAATGCGTAAAT.........................................................................................26133.0033000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000010112000000000000000000000000000000000000000100000000000000000000000000020322110000000000000000000000000000000000000000000020003020000100000000000002000000101000000100000000000200000
..............................................................................................AAATTCGATTTCTTATTCA.....................................................19132.0032000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000001000000000000000000000000000000000000360200031203070000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000001010000000000000000000000000000000000000000000
...................................................TGAGTTTGAAATTGAAATGCGTAA...........................................................................................24131.0031000000000000000000000000000000000000000000000000002000000000000000000000000001000000000000000000000000000000000001100000000000000000000000000000000000000000000000030000000000000000004000000000000100000001000000000010000011100000000000000000000000000100000000000000000000100010000000000000000000200000000003000110000200000000100
..............................................................................................AAATTCGATTTCTTATTCATAGA.................................................23131.00310000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102000100000000000000000000000000000000000000000000304103114000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................AATTCGATTTCTTATTCATAG..................................................21130.0030000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000001000000000000000000000000000000000000000000000030100000200000000000000000000000000000000000000000010350119000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................TAAATTCGATTTCTTATTCAC....................................................21127.0027000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011000000000000000000000000000000001000030300020002011000002000000000000000000000000000000000000000000010000001000000000000000000000000001000000002000000001000000010000000000000100000000000000000001000
............................................................................................TTAAATTCGATTTCTTATTCATAGT.................................................25127.0027000000000000000000000000000000000000000000000000100000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000001000000000000000000000000000000000000000031110002100000000000000000000000000000100000010000110004010010000000000000000000000000000000000100100000000100
................................................................................................ATTCGATTTCTTATTCATAG..................................................20122.0022000000000000000000000000000010000000000000000000000000000000000000000000000011010000000000000000000000000000000000000001000000000000000000000000000000000000000000000010100020210000000000000000000000000000000000000000010110010000000000000000000000000000000000000001100000002000000000000000000000000000000000000100000000100000000
...............................................................................................AATTCGATTTCTTATTCATA...................................................20120.0020000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100210000000000002000000000000000000000000000000010111002200000000000000000000000000000000000000000000000000201000000010000000000000000000000000000000000000000
............................................................................TTGTTTG--GTACAATTTAAATTCGATT..............................................................26120.0020000000000000000000000000000010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000010030000001000000000000000000000000000000000400101000000000000000100100000000000000000000000000000000000001011000000000000000000000000000000000000000100
.................................................................................................TTCGATTTCTTATTCATAG..................................................19120.0020000000000000000000000100000000000000000000000000000000000000000000000000000041300000000000000000000000010000000000000000000000000000000000000000000000000000000000000030100010100000000000000000000000000000000000000000000000000000100000000000000000000000000000000000010020000000000000000000000000000000000000000000000000000000000
.................................................................................................TTCGATTTCTTATTCATAGA.................................................20119.0019000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000500400000000000101010100100000000000010000000000000010000000000000000000000000000000000000000000000000
.............................................................................................TAAATTCGATTTCTTATTCATAGTA................................................25119.0019000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000100000000000110001000000000000000000000000000000000000000000000030131000000102000000000000000000000000000000000000000010010000000000000000000000000001000000000000000000000000
............................................................................................TTAAATTCGATTTCTTATTC......................................................20119.0019000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000001000000000002000000000000000000000000000000000000030200010100000000001000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000001040000000000000000000000000000000000000000000
.............................................................................................TAAATTCGATTTCTTATTCATAGAAA...............................................26119.0019000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000010420006000010000000000000000000010000000000000000000001000000000000000000000000000000000000000000000000000010
..................................................GTGAGTTTGAAATTGAAA..................................................................................................18119.0019000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000010000000000000000000010100010000000000000000000000000000000000000000000000000000000000001000000000000000001000000000041000000000000001000000100000100000100110000000000000000001000000
..................................................GTGAGTTTGAAATTGAAATGCGTAAATT........................................................................................28118.0018000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000001000000000000000000100000000000001000000000000000010010000000201000000000000000100000000000000000000000110001000000000000000000000000000000000000000000000000000000000000000000100000000100000000010100000100000000
............................................................................TTGTTTG--GTACAATTTAAATTCGATTTCT...........................................................29116.0016000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000010000000000000000000000000000000000000020100000004010000000000000000000000000000000000000010001101000000000000000000000000000000000000000000000000000000000100000000000000000000000010000000000000000000
..................................................GTGAGTTTGAAATTGAAATGCGTAAC..........................................................................................26116.0016000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000001000000002100004010001101010000000000000000000000000
...............................................................................................AATTCGATTTCTTATTCAT....................................................19115.0015000000000000000000000000000000000000000000000100000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120100030001000000000000000000000000000000000000000000000000100000000000000000000000000000000000010000000000000100100000000000000000000000000000000000000000001000
.............................................................................................TAAATTCGATTTCTTATTCATT...................................................22215.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000101020000000000000000000000000000000000000020000000001000000000000000000000000000000000000000000101103300100000000020100000000000100000002010000000000000001000000000000000000000000000000000000000000021000
.............................................................................TGTTTG--GTACAATTTAAATTCGATTTCT...........................................................28114.0014000000000000000000000000000000000000000000000000000000000000000000000000000001000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000070001110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................TTGAAATTGAAATGCGTAAA..........................................................................................20113.0013000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021300000000000000000000000000000000000000001000000300000000000000000000001000100000000100000000000000000000000000
.............................................................................................TAAATTCGATTTCTTATTCATACT.................................................24113.0013000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000100000000000001000000000000000000000000130001000000000000010001001100000000000001000000000000000000000000000000000000
.............................................................................................TAAATTCGATTTCTTATTCATATC.................................................24113.0013000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000056000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................TAAATTCGATTTCTTATTCC.....................................................20113.0013000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000063000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000100000000000
................................................................................................ATTCGATTTCTTATTCAT....................................................18112.0012000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000002002000000000000000000000000000000000000110100020100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
....................................................GAGTTTGAAATTGAAATGCGTAAA..........................................................................................24112.0012000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000001000100000000000000000000000000111000000000011000110000000000000000
.............................................................................................TAAATTCGATTTCTTATTCATAGTAA...............................................26111.0011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021110105000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
ACGGAATCAGCACTCTGATCCGTATCCTGTCGACCCGGGTCAACTTCCAGGTGAGTTTGAAATTGAAATGCGTAAATTGTTTG--GTACAATTTAAATTCGATTTCTTATTCATAGGTGCAATACCAGTTGATCTTCTGCTTGTGGGTGCTGACCTTCAATCCCCTSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
.............................................................................................TAAATTCGATTTCTTATTCATAG..................................................2311021.00102116127335071964514021274201532000
.............................................................................................TAAATTCGATTTCTTATTCATAGA.................................................241831.0083130013002542911371270114000
.............................................................................................TAAATTCGATTTCTTATTCATA...................................................221595.00595101251183617815458753225000
.............................................................................................TAAATTCGATTTCTTATTCAT....................................................211335.0033535316327100232820223631000
.............................................................................................TAAATTCGATTTCTTATTCATAGT.................................................241198.00198147230002935322791111000
.............................................................................................TAAATTCGATTTCTTATTCA.....................................................20196.00962833783137140100000
..............................................................................................AAATTCGATTTCTTATTCATAG..................................................22183.0083000790100000012000
..................................................GTGAGTTTGAAATTGAAATGCGTAAA..........................................................................................26173.007351232186111017700000
..................................................GTGAGTTTGAAATTGAAATGCGTAA...........................................................................................25164.00640003666716910100000
..................................................GTGAGTTTGAAATTGAAATGCGTA............................................................................................24138.003800021059676101000
.............................................................................................TAAATTCGATTTCTTATTC......................................................19137.0037203034520000000000
............................................................................................TTAAATTCGATTTCTTATTCATA...................................................23134.0034000200614840000000
..................................................GTGAGTTTGAAATTGAAATGCGT.............................................................................................23133.003340105710159000000
.............................................................................................TAAATTCGATTTCTTATTCATAAA.................................................24130.0030000200136160002000
..............................................................................................AAATTCGATTTCTTATTCATA...................................................21122.002200031618210000000
.............................................................................................TAAATTCGATTTCTTATTCATAGAA................................................25120.0020000000305100002000
..............................................................................................AAATTCGATTTCTTATTCAT....................................................20116.001600064500010000000
..................................................GTGAGTTTGAAATTGAAATGCG..............................................................................................22115.001541012400102000000
..............................................................................................AAATTCGATTTCTTATTCATAGT.................................................23113.001310030011312100000
............................................................................................TTAAATTCGATTTCTTATTCATAGA.................................................25113.001300000007600000000
.............................................................................................TAAATTCGATTTCTTATTCATAA..................................................23113.001300060011410000000
.............................................................................................TAAATTCGATTTCTTATT.......................................................18112.001200005700000000000
..................................................GTGAGTTTGAAATTGAAA..................................................................................................18112.001200011800002000000
..............................................................................................AAATTCGATTTCTTATTCATAGA.................................................23111.001100040033010000000
..................................................GTGAGTTTGAAATTGAAATGC...............................................................................................21111.001100003500003000000
...............................................................................................AATTCGATTTCTTATTCATAG..................................................21111.001100080020100000000
.............................................................................................TAAATTCGATTTCTTATTCATAGTA................................................25111.001110000012430000000
.......CAGCACTCTGATCCGTATCCTGTC.......................................................................................................................................24110.001002800000000000000
............................................................................................TTAAATTCGATTTCTTATTCATAG..................................................24110.001010040022000100000
..................................................GTGAGTTTGAAATTGAAATGCGTAAAT.........................................................................................27110.001002040000102001000
..................................................GTGAGTTTGAAATTGAAAT.................................................................................................1918.00800014200001000000
.............................................................................................TAAATTCGATTTCTTATTCATAGTAA...............................................2618.00800000011240000000
..............................................................................................AAATTCGATTTCTTATTCA.....................................................1918.00820004200000000000
.................................................................................................TTCGATTTCTTATTCATAGA.................................................2017.00700000041020000000
.................................................................................................TTCGATTTCTTATTCATAG..................................................1916.00610101300000000000
............................................................................................TTAAATTCGATTTCTTATTCAT....................................................2216.00600000011201100000
...............................................................................................AATTCGATTTCTTATTCATA...................................................2015.00500012200000000000
.............................................................................................TAAATTCGATTTCTTATTCATAGG.................................................2415.00501001000210000000
.................................................................................................TTCGATTTCTTATTCATAGTA................................................2115.00500000032000000000
...............................................................................................AATTCGATTTCTTATTCA.....................................................1815.00500002300000000000
.............................................................................................TAAATTCGATTTCTTATTCATAGAAA...............................................2615.00500000000310010000
..................................................GTGAGTTTGAAATTGAAATGCGTAAATT........................................................................................2814.00400040000000000000
.............................................................................................TAAATTCGATTTCTTATTCATAGC.................................................2414.00410010001000100000
.............................................................................................TAAATTCGATTTCTTATTCATT...................................................2214.00410020001000000000
.............................................................................................TAAATTCGATTTCTTATTCATAT..................................................2314.00410000000010200000
..................................................GTGAGTTTGAAATTGAAATG................................................................................................2014.00400001200001000000
............................................................................TTGTTTG--GTACAATTTAAATTCGATTTCT...........................................................2914.00400000022000000000
.................ATCCGTATCCTGTCGACCCG.................................................................................................................................2013.00300300000000000000
........................................................................................................................AATACCAGTTGATCTTCTGCT.........................2113.00300300000000000000
.................ATCCGTATCCTGTCGACCC..................................................................................................................................1913.00330000000000000000
............................................................................TTGTTTG--GTACAATTTAAATTCGAT...............................................................2513.00320010000000000000
.CGGAATCAGCACTCTGATC..................................................................................................................................................1912.00202000000000000000
.......................................................TTTGAAATTGAAATGCGTAAA..........................................................................................2112.00200000000101000000
.....................................................AGTTTGAAATTGAAATGCGT.............................................................................................2012.00200000000002000000
.....ATCAGCACTCTGATCCGTATCCTGTC.......................................................................................................................................2612.00201100000000000000
..............................................................................................................................AGTTGATCTTCTGCTTGTGGGTGCT...............2512.00201100000000000000
....................................................................TGCGTAAATTGTTTG--GTAC.............................................................................1912.00202000000000000000
........AGCACTCTGATCCGTATCCTGT........................................................................................................................................2212.00200200000000000000
............................................................................................TTAAATTCGATTTCTTATTC......................................................2012.00210100000000000000
.................................................................................................TTCGATTTCTTATTCATAGT.................................................2012.00210000001000000000
............................................................................................TTAAATTCGATTTCTTATTCATAGT.................................................2512.00200020000000000000
...................................................................ATGCGTAAATTGTTTG--GTAC.............................................................................2012.00220000000000000000
....................................................................TGCGTAAATTGTTTG--GTACAATT.........................................................................2312.00210010000000000000
.....................................................................GCGTAAATTGTTTG--GTACAATT.........................................................................2212.00220000000000000000
.................................................................................TG--GTACAATTTAAATTCGATTTCTTA.........................................................2612.00200000000200000000
......................................................GTTTGAAATTGAAATGCGTAAA..........................................................................................2212.00200000010001000000
................................................................................................ATTCGATTTCTTATTCATAG..................................................2012.00210001000000000000
..............................................................................................AAATTCGATTTCTTATTC......................................................1812.00201000100000000000
.........GCACTCTGATCCGTATCCTGTC.......................................................................................................................................2212.00200200000000000000
.....................................................................GCGTAAATTGTTTG--GTACA............................................................................1912.00202000000000000000
.................................................................................................TTCGATTTCTTATTCATAGAA................................................2122.00400100002100000000
....................................................GAGTTTGAAATTGAAATGCGTA............................................................................................2212.00200000000002000000
.........GCACTCTGATCCGTATCCT..........................................................................................................................................1912.00202000000000000000
........AGCACTCTGATCCGTATCCTGTCGACCC..................................................................................................................................2812.00200110000000000000
........AGCACTCTGATCCGTATCCTGTC.......................................................................................................................................2312.00201100000000000000
.............................................................................................TAAATTCGATTTCTTAT........................................................1712.00200000000011000000
.............................................................................................TAAATTCGATTTCTTATTCATAAAA................................................2531.33400000000210001000
.............................................................................................TAAATTCGATTTCTTATTCATAGGT................................................2511.00100001000000000000
..................................................................................................TCGATTTCTTATTCATA...................................................1711.00100000001000000000
............................................................................TTGTTTG--GTACAATTTAAATTCGATTTC............................................................2811.00100000010000000000
..................................................GTGAGTTTGAAATTGAAATGCGTAC...........................................................................................2511.00100000000100000000
...............................................................................................AATTCGATTTCTTATTCAT....................................................1911.00100010000000000000
..................................................GTGAGTTTGAAATTGAAATGCGTAAG..........................................................................................2611.00100000000000100000
..........................................................GAAATTGAAATGCGTAAA..........................................................................................1811.00100000000001000000
..................................................................AATGCGTAAATTGTTTG--GTA..............................................................................2011.00100000001000000000
.........................................................................AAATTGTTTG--GTACAATT.........................................................................1811.00110000000000000000
............CTCTGATCCGTATCCTGTCGACCC..................................................................................................................................2411.00100100000000000000
.................................................................................................................................TGATCTTCTGCTTGTGGGTGCTGACCT..........2711.00101000000000000000
........AGCACTCTGATCCGTATCCTGTCG......................................................................................................................................2411.00101000000000000000
......................................................................CGTAAATTGTTTG--GTACAATT.........................................................................2111.00110000000000000000
..................................................................AATGCGTAAATTGTTTG--GTACAAT..........................................................................2411.00101000000000000000
...................................................................................................................GGTGCAATACCAGTTGATCTT..............................2111.00100010000000000000
ACGGAATCAGCACTCTGATC..................................................................................................................................................2011.00100100000000000000
.....................................................AGTTTGAAATTGAAATGCGTAAA..........................................................................................2311.00100000000001000000
...................................................TGAGTTTGAAATTGAAATGCGTAAATT........................................................................................2711.00100010000000000000
.....................................................AGTTTGAAATTGAAATGC...............................................................................................1811.00101000000000000000
......................................................GTTTGAAATTGAAATGCGTAA...........................................................................................2111.00100000000001000000
..................................................................................................................................GATCTTCTGCTTGTGGGTGCTGA.............2311.00100010000000000000
............................................................................TTGTTTG--GTACAATTTAAATTCGATT..............................................................2611.00110000000000000000
................................................................................................ATTCGATTTCTTATTCATA...................................................1911.00100000001000000000
..........................................................................................ATTTAAATTCGATTTCTTATTCATA...................................................2511.00100010000000000000
...............................................................................................AATTCGATTTCTTATTCATAGTA................................................2311.00100000000100000000
..............................................................................................AAATTCGATTTCTTATTCATAGAA................................................2411.00100000001000000000
....................CGTATCCTGTCGACC...................................................................................................................................1511.00100000010000000000
.....................GTATCCTGTCGACCCGGGTC.............................................................................................................................2011.00100000000000100000
.............TCTGATCCGTATCCTGTCGACCCGGGTC.............................................................................................................................2811.00100100000000000000
..........................................................................................ATTTAAATTCGATTTCTTATTCATAGT.................................................2711.00100010000000000000
.................................................................................................................................TGATCTTCTGCTTGTGGGTGCTG..............2311.00100000000000100000
..................................................GTGAGTTTGAAATTGAAATGCGTAAAA.........................................................................................2711.00100000000000100000
.......................ATCCTGTCGACCCGGGTC.............................................................................................................................1811.00100010000000000000
............................................................................................TTAAATTCGATTTCTTATTCA.....................................................2111.00100010000000000000
.....................................................................................................................................CTTCTGCTTGTGGGTGCC...............1811.00100100000000000000
..................................................................................................................................GATCTTCTGCTTGTGGGTGCT...............2111.00100010000000000000
.......CAGCACTCTGATCCGTATCCTGT........................................................................................................................................2311.00100100000000000000
..................................................................AATGCGTAAATTGTTTG--GTACAATT.........................................................................2511.00101000000000000000
...................................................................................................CGATTTCTTATTCATAGA.................................................1811.00100000000010000000
...................................................TGAGTTTGAAATTGAAATGCGTAAAT.........................................................................................2611.00100010000000000000
.........GCACTCTGATCCGTATCCTGTCGACC...................................................................................................................................2611.00100100000000000000
......................................................................................................................GCAATACCAGTTGATCTTCTGCTTGT......................2611.00101000000000000000
................................ACCCGGGTCAACTTCCAGGT..................................................................................................................2011.00100000000000100000
............................................................................................TTAAATTCGATTTCTTATTCATAA..................................................2411.00100010000000000000
........................................................................................................................AATACCAGTTGATCTTCTGCTTGT......................2411.00100100000000000000
.............................................................ATTGAAATGCGTAAATTGTTTG--GTACAAT..........................................................................2911.00101000000000000000
...........................................................................................TTTAAATTCGATTTCTTA.........................................................1811.00100000000001000000
................................................................................TTG--GTACAATTTAAATTCGATTTCTTA.........................................................2711.00100000000010000000
.......................ATCCTGTCGACCCGGGTCAACTTCCAG....................................................................................................................2711.00101000000000000000
...............TGATCCGTATCCTGTCGA.....................................................................................................................................1811.00100000100000000000
..................................................................................................................................GATCTTCTGCTTGTGGGT..................1811.00100000000000100000
.............................................................................TGTTTG--GTACAATTTAAATTCGATTTC............................................................2711.00100000010000000000
........................................................TTGAAATTGAAATGCGTAAAT.........................................................................................2111.00100010000000000000
...................................................TGAGTTTGAAATTGAAATGCGTAAA..........................................................................................2511.00100000010000000000
...........................................................................................TTTAAATTCGATTTCTTATTC......................................................2111.00100010000000000000
.......CAGCACTCTGATCCGTATCCTGTCG......................................................................................................................................2511.00101000000000000000
...............................................................................................AATTCGATTTCTTATTCATAGT.................................................2211.00100000010000000000
.................................................................................................TTCGATTTCTTATTCATAGCA................................................2111.00100000010000000000
.......CAGCACTCTGATCCGTATCCTGC........................................................................................................................................2311.00100100000000000000
........................................................................................................................................CTGCTTGTGGGTGCTGACCTT.........2111.00101000000000000000
.......CAGCACTCTGATCCGTATCCT..........................................................................................................................................2111.00100100000000000000
.....ATCAGCACTCTGATCCGC...............................................................................................................................................1811.00100100000000000000
............................................................................................TTAAATTCGATTTCTTATTCATAAA.................................................2511.00100000000010000000
.......................ATCCTGTCGACCCGGGTCAACTTCCAGGT..................................................................................................................2911.00100100000000000000
...............................................................................................................................GTTGATCTTCTGCTTGTGGGTGCT...............2411.00100100000000000000
...................................................................................................................GGTGCAATACCAGTTGATCTTC.............................2211.00100010000000000000
..........CACTCTGATCCGTATCCTGTCGACCCGG................................................................................................................................2811.00100100000000000000
....................CGTATCCTGTCGACCG..................................................................................................................................1611.00100000001000000000
..............................................................................................AAATTCGATTTCTTATTCATAGTA................................................2411.00100000001000000000
.........GCACTCTGATCCGTATCCTGT........................................................................................................................................2111.00101000000000000000
............................................................................TTGTTTG--GTACAATTTAAATTCGATTTCTT..........................................................3011.00100000001000000000
............................................................................................TTAAATTCGATTTCTTATTCATAAAA................................................2630.67200000000200000000
.............................................................................................TAAATTCGATTTCTTA.........................................................1620.50100000000100000000
..............................................................................................AAATTCGATTTCTTATTCATAAAA................................................2450.40200010000010000000
..............................................................................................AAATTCGATTTCTTATTCATAAA.................................................2330.33100010000000000000
.................................................................................................TTCGATTTCTTATTCATAGAAA...............................................2250.20100000010000000000
droSec2
ACGGAATCAGCACTCTGATCCGTATCCTGTCGACCCGGGTCAACTTCCAGGTGAGTTTGAAATTGAAATGCGTAAATTGTTTG--GTACAATTTAAATTCGATTTCTTATTCATAGGTGCAATACCAGTTGATATTCTGCCTGTGGGTGCTGACCTTCAATCCCCTSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
.............................................................................................TAAATTCGATTTCTTATTCATAG..................................................2312972.00297227791861114
.............................................................................................TAAATTCGATTTCTTATTCAT....................................................211720.007203984713262
.............................................................................................TAAATTCGATTTCTTATTCATA...................................................221480.0048040861947
.............................................................................................TAAATTCGATTTCTTATTCATAGT.................................................241470.00470196878899
..............................................................................................AAATTCGATTTCTTATTCATAG..................................................221346.00346345001
.............................................................................................TAAATTCGATTTCTTATTCA.....................................................201112.00112593050
..................................................GTGAGTTTGAAATTGAAATGCGTAAA..........................................................................................261100.00100329626
.............................................................................................TAAATTCGATTTCTTATTCATAGA.................................................24184.008471229
...............................................................................................AATTCGATTTCTTATTCATAG..................................................21177.007775002
..............................................................................................AAATTCGATTTCTTATTCAT....................................................20169.0069571011
..............................................................................................AAATTCGATTTCTTATTCATA...................................................21154.005453001
..............................................................................................AAATTCGATTTCTTATTCATAGT.................................................23151.00512551110
..................................................GTGAGTTTGAAATTGAAATGCGT.............................................................................................23138.003881875
..................................................GTGAGTTTGAAATTGAAATGCGTAA...........................................................................................25130.0030216111
..................................................GTGAGTTTGAAATTGAAATGCGTA............................................................................................24125.00254984
..................................................GTGAGTTTGAAATTGAAATGCGTAAAT.........................................................................................27121.002151330
..................................................GTGAGTTTGAAATTGAAATGCG..............................................................................................22121.00215826
..................................................GTGAGTTTGAAATTGAAATGC...............................................................................................21118.00180729
............................................................................................TTAAATTCGATTTCTTATTCATAG..................................................24118.001814013
.............................................................................................TAAATTCGATTTCTTATTC......................................................19118.00188019
.............................................................................................TAAATTCGATTTCTTATTCATAA..................................................23115.001514001
............................................................................................TTAAATTCGATTTCTTATTCAT....................................................22112.00129003
..............................................................................................AAATTCGATTTCTTATTCATAGA.................................................23110.001010000
............................................................................................TTAAATTCGATTTCTTATTCATA...................................................2319.0097002
.............................................................................................TAAATTCGATTTCTTATTCATAT..................................................2318.0088000
..................................................GTGAGTTTGAAATTGAAATGCGTAAAA.........................................................................................2717.0070160
...............................................................................................AATTCGATTTCTTATTCATAGT.................................................2217.0075011
..............................................................................................AAATTCGATTTCTTATTCA.....................................................1916.0065001
...............................................................................................AATTCGATTTCTTATTCATA...................................................2016.0066000
................................................................................................ATTCGATTTCTTATTCATAG..................................................2016.0066000
...................................................TGAGTTTGAAATTGAAATGCGTAAA..........................................................................................2515.0050221
...............................................................................................AATTCGATTTCTTATTCAT....................................................1915.0053002
.............................................................................................TAAATTCGATTTCTTATTCATT...................................................2214.0044000
.....ATCAGCACTCTGATCCGTATCCTGTC.......................................................................................................................................2614.0041030
.....................................................................................................................................ATTCTGCCTGTGGGTGCT...............1813.0030030
.................................................................................................TTCGATTTCTTATTCATAG..................................................1913.0032001
...............................................................................................AATTCGATTTCTTATTCATAA..................................................2113.0033000
..................................................GTGAGTTTGAAATTGAAATGCGTAAATT........................................................................................2813.0031200
.............................................................................................TAAATTCGATTTCTTATTCAG....................................................2113.0033000
..................................................GTGAGTTTGAAATTGAAA..................................................................................................1813.0030021
..............................................................TTGAAATGCGTAAATTGTTTG--GTAC.............................................................................2512.0021100
.............................................................................................TAAATTCGATTTCTTATTCATAGG.................................................2412.0022000
...................................................TGAGTTTGAAATTGAAATGCGTAAAT.........................................................................................2612.0021010
...................................................TGAGTTTGAAATTGAAATGCGTAA...........................................................................................2412.0021100
.............................................................................................TAAATTCGATTTCTTATTCATAGC.................................................2412.0022000
.............................................................................................TAAATTCGATTTCTTATT.......................................................1812.0022000
............................................................................................TTAAATTCGATTTCTTATTCA.....................................................2112.0021001
..................................................................................................................................GATATTCTGCCTGTGGGT..................1812.0020020
................................................................................................ATTCGATTTCTTATTCATAGT.................................................2112.0021100
..................................................GTGAGTTTGAAATTGAAAT.................................................................................................1912.0020110
...........................................................................................TTTAAATTCGATTTCTTATTCATA...................................................2412.0022000
.......CAGCACTCTGATCCGTATCCTGTC.......................................................................................................................................2412.0021010
..................................................GTGAGTTTGAAATTGAAATGCGTG............................................................................................2412.0020002
.....................................................................................................................................ATTCTGCCTGTGGGTGCTGAC............2112.0020020
...................................................................ATGCGTAAATTGTTTG--GTACAAT..........................................................................2312.0020110
.............................................................................................TAAATTCGATTTCTTATTCAA....................................................2112.0020002
.................................................................................................TTCGATTTCTTATTCATAGAA................................................2112.0020110
............................................................................TTGTTTG--GTACAATTTAAATTCGAT...............................................................2512.0020002
.............................................................................................TAAATTCGATTTCTTATTCATAGAA................................................2512.0021001
....................................................................................................................................TATTCTGCCTGTGGGTGCT...............1912.0020020
.............................................................................................TAAATTCGATTTCTTATTCATAC..................................................2311.0011000
...................................................................ATGCGTAAATTGTTTG--GTACAATT.........................................................................2411.0010100
....................................................................TGCGTAAATTGTTTG--GTACAAT..........................................................................2211.0010010
.......................ATCCTGTCGACCCGGGTCAACTTCCA.....................................................................................................................2611.0011000
...................................................TGAGTTTGAAATTGAAATGCGTAAAAA........................................................................................2711.0010100
...................................................TGAGTTTGAAATTGAAATGCGTA............................................................................................2311.0011000
.................................................................................................TTCGATTTCTTATTCATA...................................................1811.0011000
.....................GTATCCTGTCGACCCGGGTC.............................................................................................................................2011.0010010
...................................................................ATGCGTAAATTGTTTG--GT...............................................................................1811.0010010
..................................................................AATGCGTAAATTGTTTG--GTACA............................................................................2211.0010100
.................................................................................................TTCGATTTCTTATTCATAGA.................................................2011.0011000
.................................................................................................................................TGATATTCTGCCTGTGGGTGCT...............2211.0011000
.............................................................................................TAAATTCGATTTCTTATTCATACT.................................................2411.0011000
.................................................................................................TTCGATTTCTTATTCATAGT.................................................2011.0011000
.............................................................................................TAAATTCGATTTCTTATTCATG...................................................2211.0011000
........AGCACTCTGATCCGTATCCTGTCGA.....................................................................................................................................2511.0010100
....................................................................TGCGTAAATTGTTTG--GTA..............................................................................1811.0011000
.........................................................................................................................ATACCAGTTGATATTCTGCCTGTGGGT..................2711.0010010
..............................................................TTGAAATGCGTAAATTGTTTG--GTACA............................................................................2611.0010100
...................................................................ATGCGTAAATTGTTTG--GTACAATTT........................................................................2511.0010010
................................................................................................ATTCGATTTCTTATTCATA...................................................1911.0011000
..............................................................................................AAATTCGATTTCTTATTCATAT..................................................2211.0011000
..GGAATCAGCACTCTGATCCGT...............................................................................................................................................2111.0011000
...................................................TGAGTTTGAAATTGAAATGCGT.............................................................................................2211.0010001
.............................................................................................TAAATTCGATTTCTTATTCG.....................................................2011.0010001
..................................................................AATGCGTAAATTGTTTG--GTACAATT.........................................................................2511.0010100
..........CACTCTGATCCGTATCCTGTCG......................................................................................................................................2211.0011000
.....................................................................................................................................ATTCTGCCTGTGGGTGCTGACCTTCA.......2611.0011000
.................................................................................................TTCGATTTCTTATTCATAGTA................................................2111.0010010
.............................................................................................TAAATTCGATTTCTTATTCATAAA.................................................2411.0011000
..................................................GTGAGTTTGAAATTGAAATGCGTAC...........................................................................................2511.0010100
.........GCACTCTGATCCGTATCCTGTC.......................................................................................................................................2211.0010010
......................TATCCTGTCGACCCGGGTC.............................................................................................................................1911.0010010
..........................................................................................ATTTAAATTCGATTTCTTATTC......................................................2211.0011000
..................................................GTGAGTTTGAAATTGAAATGCGG.............................................................................................2311.0011000
................................................................................................ATTCGATTTCTTATTCATAGA.................................................2111.0011000
..................................................................................................TCGATTTCTTATTCATAG..................................................1811.0011000
.............................................................................................................................CAGTTGATATTCTGCCTGTGGGTGCT...............2611.0011000
...............................................................................................AATTCGATTTCTTATTCATAGA.................................................2211.0011000
.............................................................................TGTTTG--GTACAATTTAAATTCGATT..............................................................2511.0011000
..................................................GTGAGTTTGAAATTGAAATGCGTAAATTG.......................................................................................2911.0010100
.................................................................AAATGCGTAAATTGTTTG--GTACAATT.........................................................................2611.0010100
.............................................................................................TAAATTCGATTTCTTATTCATAGTA................................................2511.0011000
.......CAGCACTCTGATCCGTATCCTGTCGAC....................................................................................................................................2711.0011000
.......................................................................................ACAATTTAAATTCGATTTCTT..........................................................2111.0011000
...................................................................................................................................ATATTCTGCCTGTGGGTGCT...............2011.0011000
....................................................................TGCGTAAATTGTTTG--GTACAATT.........................................................................2311.0010100
................GATCCGTATCCTGTCGACCCGGGT..............................................................................................................................2411.0010010
...................................................TGAGTTTGAAATTGAAATGCGTAAAA.........................................................................................2611.0010010
..................................................................AATGCGTAAATTGTTTG--GTACAA...........................................................................2311.0010100
..............................................................................................AAATTCGATTTCTTATTCATAA..................................................2211.0011000
.................ATCCGTATCCTGTCGACCCGGGT..............................................................................................................................2311.0010010
.....................................................AGTTTGAAATTGAAATGCGTAAA..........................................................................................2311.0010001
..................................................GTGAGTTTGAAATTGAAATG................................................................................................2011.0010001
............................................................................................TTAAATTCGATTTCTTATTC......................................................2011.0011000
.................................................................AAATGCGTAAATTGTTTG--GTACAAT..........................................................................2511.0010010
.............................................................................................TAAATTCGATTTCTTATTCATAGTG................................................2511.0011000
...................................................................................................................................ATATTCTGCCTGTGGGTGCTGA.............2211.0010010
..................................................................AATGCGTAAATTGTTTG--GTACAATTT........................................................................2611.0010100
.......................ATCCTGTCGACCCGGGTC.............................................................................................................................1811.0010010
..............................................................................................AAATTCGATTTCTTATTCATAAA.................................................2330.3311000
droYak3
ACGGAATCAGCACTCTGATCCGTATCCTGTCCACTCGTGTCAACTTCCAGGTGAGTTTGAAATTGAAATGCGTAAATTGTTTG--GTACAATTTAAATTCGATTTCTTATTCATAGGTGCAATACCAGTTGATCTTCTGCCTGTGGGTGCTGACCTTCAATCCCCTSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
.............................................................................................TAAATTCGATTTCTTATTCATAG..................................................2314088.0040884739444618111290010
.............................................................................................TAAATTCGATTTCTTATTCATAGT.................................................241530.005301735048191344390000
.............................................................................................TAAATTCGATTTCTTATTCATA...................................................221500.00500545312751170000
.............................................................................................TAAATTCGATTTCTTATTCAT....................................................211477.00477240455154240000
..............................................................................................AAATTCGATTTCTTATTCATAG..................................................221385.003850385000000000
.............................................................................................TAAATTCGATTTCTTATTCA.....................................................201100.00100784103500000
.............................................................................................TAAATTCGATTTCTTATTCATAGA.................................................24159.0059056101100000
..............................................................................................AAATTCGATTTCTTATTCATAGT.................................................23154.0054046300410000
..................................................GTGAGTTTGAAATTGAAATGCGTAAA..........................................................................................26153.00531133011250000
..............................................................................................AAATTCGATTTCTTATTCATA...................................................21145.0045045000000000
..............................................................................................AAATTCGATTTCTTATTCAT....................................................20139.0039039000000000
............................................................................................TTAAATTCGATTTCTTATTCATAG..................................................24137.0037037000000000
...............................................................................................AATTCGATTTCTTATTCATAG..................................................21122.0022021100000000
..................................................GTGAGTTTGAAATTGAAATGCGTAA...........................................................................................25120.002009420050000
..................................................GTGAGTTTGAAATTGAAATGCGTA............................................................................................24119.001906420160000
..................................................GTGAGTTTGAAATTGAAATGCGT.............................................................................................23119.001911901430000
.............................................................................................TAAATTCGATTTCTTATTCATAA..................................................23118.0018017000100000
..................................................................................................................................GATCTTCTGCCTGTGGGTGCT...............21116.001604200280000
.............................................................................................TAAATTCGATTTCTTATTCATAGC.................................................24111.001111900000000
.............................................................................................TAAATTCGATTTCTTATTC......................................................19111.001137000100000
..................................................................................................TCGATTTCTTATTCATAG..................................................18111.0011011000000000
............................................................................................TTAAATTCGATTTCTTATTCAT....................................................22111.001109000110000
...............................................................................................AATTCGATTTCTTATTCATAGT.................................................22110.001005022100000
..................................................GTGAGTTTGAAATTGAAATGCGTAAAT.........................................................................................27110.001004100050000
..................................................GTGAGTTTGAAATTGAAATGCG..............................................................................................2219.00902200140000
..............................................................................................AAATTCGATTTCTTATTCA.....................................................1919.00908000100000
..............................................................................................AAATTCGATTTCTTATTCATAGA.................................................2318.00807100000000
................................................................................................ATTCGATTTCTTATTCATAG..................................................2017.00707000000000
..................................................GTGAGTTTGAAATTGAAATGCGTAAATT........................................................................................2817.00703100030000
............................................................................................TTAAATTCGATTTCTTATTC......................................................2017.00706100000000
.................................................................................................TTCGATTTCTTATTCATAG..................................................1917.00707000000000
............................................................................................TTAAATTCGATTTCTTATTCATA...................................................2317.00707000000000
............................................................................................TTAAATTCGATTTCTTATTCATAGT.................................................2516.00604000020000
...................................................................................................................................ATCTTCTGCCTGTGGGTGCT...............2015.00500200210000
...............................................................................................AATTCGATTTCTTATTCATA...................................................2015.00505000000000
..................................................GTGAGTTTGAAATTGAAATGC...............................................................................................2115.00501000040000
................................................................................................ATTCGATTTCTTATTCATA...................................................1914.00404000000000
.......CAGCACTCTGATCCGTATCCTGTCCACT...................................................................................................................................2814.00431000000000
................................................................................................ATTCGATTTCTTATTCATAGT.................................................2114.00401000120000
..................................................................................................................................GATCTTCTGCCTGTGGGTGC................2014.00402200000000
.............................................................................................TAAATTCGATTTCTTATTCATAGG.................................................2414.00403001000000
.............................................................................................TAAATTCGATTTCTTATTCATAGAA................................................2513.00303000000000
.............................................................................................TAAATTCGATTTCTTATTCATAC..................................................2313.00311100000000
.................................................................................................TTCGATTTCTTATTCATAGT.................................................2013.00302001000000
........AGCACTCTGATCCGTATCCT..........................................................................................................................................2013.00302100000000
...............................CACTCGTGTCAACTTCCAGGT..................................................................................................................2113.00300200010000
.......CAGCACTCTGATCCGTATCCTGTC.......................................................................................................................................2413.00310000020000
..................................................................AATGCGTAAATTGTTTG--GTAC.............................................................................2113.00310200000000
........AGCACTCTGATCCGTATCCTGTCCACT...................................................................................................................................2713.00321000000000
..................................................GTGAGTTTGAAATTGAAAT.................................................................................................1913.00300020100000
........AGCACTCTGATCCGTATCCTGTCCACTC..................................................................................................................................2813.00330000000000
........AGCACTCTGATCCGTATCCTGTCC......................................................................................................................................2412.00202000000000
.....................GTATCCTGTCCACTCGTGT..............................................................................................................................1912.00201100000000
.............................................................ATTGAAATGCGTAAATTGTTTG--GTACAAT..........................................................................2912.00200000020000
........AGCACTCTGATCCGTATCCTGT........................................................................................................................................2212.00201100000000
..................................................................................................TCGATTTCTTATTCATAGA.................................................1912.00201100000000
...............................................................................................................................GTTGATCTTCTGCCTGTGGGT..................2112.00201000010000
.................................................................................................................................TGATCTTCTGCCTGTGGGTGCT...............2212.00201000010000
............................................................AATTGAAATGCGTAAATTGTTTG--GTACA............................................................................2812.00200100010000
..............................CCACTCGTGTCAACTTCCAGGTGCA...............................................................................................................2512.00201000010000
.......CAGCACTCTGATCCGTATCCTGT........................................................................................................................................2312.00210000010000
...................................................TGAGTTTGAAATTGAAATGCGTAAAT.........................................................................................2612.00202000000000
................................ACTCGTGTCAACTTCCAGGTGCA...............................................................................................................2312.00201000010000
.......................ATCCTGTCCACTCGTGTCAACTTCCA.....................................................................................................................2612.00202000000000
...............................................................................................AATTCGATTTCTTATTCAT....................................................1912.00202000000000
.............................................................................................TAAATTCGATTTCTTATTCAC....................................................2112.00200200000000
.................................................................AAATGCGTAAATTGTTTG--GTACAAT..........................................................................2512.00201000010000
.............................................................................................TAAATTCGATTTCTTATTCATT...................................................2212.00202000000000
..............................................................TTGAAATGCGTAAATTGTTTG--GTACAAT..........................................................................2812.00201000010000
....................................................................TGCGTAAATTGTTTG--GTACAATT.........................................................................2312.00202000000000
.............................................................................................TAAATTCGATTTCTTATTCATATT.................................................2422.00400001300000
.......CAGCACTCTGATCCGTATCCT..........................................................................................................................................2112.00211000000000
.....................GTATCCTGTCCACTCGTGTCAAC..........................................................................................................................2311.00101000000000
........AGCACTCTGATCCGTATCCTGTC.......................................................................................................................................2311.00100000010000
.................................................................AAATGCGTAAATTGTTTG--GTACAATT.........................................................................2611.00100100000000
.............................................................ATTGAAATGCGTAAATTGTTTG--GTA..............................................................................2511.00100000010000
...................................................................ATGCGTAAATTGTTTG--GTAC.............................................................................2011.00101000000000
...............................................................TGAAATGCGTAAATTGTTTG--GTAC.............................................................................2411.00100100000000
...................................................TGAGTTTGAAATTGAAATGCGTAA...........................................................................................2411.00101000000000
............................................................................................TTAAATTCGATTTCTTATTCATAGA.................................................2511.00101000000000
....................CGTATCCTGTCCACTCGTGTCAACT.........................................................................................................................2511.00101000000000
.....................................................................................................................................CTTCTGCCTGTGGGTGCTGACCTTC........2511.00101000000000
..................................................GTGAGTTTGAAATTGAAA..................................................................................................1811.00101000000000
...................................................................ATGCGTAAATTGTTTG--GTACAAT..........................................................................2311.00100010000000
................................................................GAAATGCGTAAATTGTTTG--GTACAAT..........................................................................2611.00100100000000
...........................................................................ATTGTTTG--GTACAATTTACG.....................................................................2011.00101000000000
.................................................................................................TTCGATTTCTTATTCATAGTC................................................2111.00100100000000
.............................................................ATTGAAATGCGTAAATTGTTTG--GTAC.............................................................................2611.00100100000000
.............................................................................................TAAATTCGATTTCTTATTCATAAT.................................................2411.00100000100000
..............................CCACTCGTGTCAACTTCCAG....................................................................................................................2011.00100000010000
.......................ATCCTGTCCACTCGTGTCAACTTCCAGGC..................................................................................................................2911.00100100000000
.......CAGCACTCTGATCCGTATCCTGC........................................................................................................................................2311.00110000000000
.................................................................................................TTCGATTTCTTATTCATAGA.................................................2011.00101000000000
.............................................................ATTGAAATGCGTAAATTGTTT....................................................................................2111.00100000010000
..........................................................................................ATTTAAATTCGATTTCTTATTCATAGT.................................................2711.00100000010000
.........GCACTCTGATCCGTATCCTGTC.......................................................................................................................................2211.00100000010000
..................................................GTGAGTTTGAAATTGAAATGCGTAAC..........................................................................................2611.00100000100000
....................................................GAGTTTGAAATTGAAATGCGTAAA..........................................................................................2411.00101000000000
.......................ATCCTGTCCACTCGTGTCAA...........................................................................................................................2011.00100000010000
...........................................................................................TTTAAATTCGATTTCTTATTC......................................................2111.00101000000000
..............................................................................GTTTG--GTACAATTTAAATTCGAT...............................................................2311.00100000010000
.............TCTGATCCGTATCCTGTCCACTCGTGT..............................................................................................................................2711.00100000010000
.....................GTATCCTGTCCACTCGTGTC.............................................................................................................................2011.00100100000000
............................................................................................TTAAATTCGATTTCTTATTCA.....................................................2111.00101000000000
.................................................................AAATGCGTAAATTGTTTG--GTA..............................................................................2111.00100100000000
....................CGTATCCTGTCCACTCGTGTC.............................................................................................................................2111.00100100000000
.............................................................................................TAAATTCGATTTCTTATTCATAAAA................................................2511.00101000000000
..........................................................................................ATTTAAATTCGATTTCTTATTCATA...................................................2511.00101000000000
..................................................................AATGCGTAAATTGTTTG--GTACA............................................................................2211.00100000010000
........AGCACTCTGATCCGTATCCTGTCCACTCGT................................................................................................................................3011.00100000010000
..............................................................................................AAATTCGATTTCTTATTCATT...................................................2111.00101000000000
..............................................................................................AAATTCGATTTCTTATTCATAGTA................................................2411.00101000000000
...............................CACTCGTGTCAACTTCCAGGTGC................................................................................................................2311.00101000000000
.....................................................AGTTTGAAATTGAAATGCGTAAAT.........................................................................................2411.00100000100000
.................................................................................................................................TGATCTTCTGCCTGTGGGTGCC...............2211.00100000010000
.....................................................................................................................................CTTCTGCCTGTGGGTGCTGACCTC.........2411.00100100000000
............................GTCCACTCGTGTCAACTTCCAG....................................................................................................................2211.00100000010000
.................................................................................................TTCGATTTCTTATTCATA...................................................1811.00101000000000
.....................................................................................................................................CTTCTGCCTGTGGGTGCTGAC............2111.00101000000000
.........GCACTCTGATCCGTATCCTGTCCACTCGT................................................................................................................................2911.00110000000000
....................................................GAGTTTGAAATTGAAATGCGTA............................................................................................2211.00100100000000
......................................................GTTTGAAATTGAAATGCGTAA...........................................................................................2111.00100000010000
......................................................................................TACAATTTAAATTCGATTTCTTATT.......................................................2511.00101000000000
........................................................................................................................................CTGCCTGTGGGTGCTGACCTTCAATC....2611.00101000000000
..............................................................................................AAATTCGATTTCTTATTCATAGC.................................................2311.00100100000000
..........CACTCTGATCCGTATCCTGTCC......................................................................................................................................2211.00101000000000
............CTCTGATCCGTATCCTGTCCA.....................................................................................................................................2111.00101000000000
..............................................................................................AAATTCGATTTCTTATTCATAGG.................................................2311.00101000000000
.......................ATCCTGTCCACTCGTGTCAACTTCCAGG...................................................................................................................2811.00101000000000
..............................................................................................AAATTCGATTTCTTATTC......................................................1811.00101000000000
...............................CACTCGTGTCAACTTCCAG....................................................................................................................1911.00101000000000
..........................................................................................ATTTAAATTCGATTTCTTATTCATAG..................................................2611.00101000000000
.......................ATCCTGTCCACTCGTGTCAACTTCC......................................................................................................................2511.00100010000000
...................................................................................................................................ATCTTCTGCCTGTGGGTGCTG..............2111.00100010000000
.................................................................................................................................TGATCTTCTGCCTGTGGGT..................1911.00100100000000
........................................................................................................................AATACCAGTTGATCTTCTGCCTGTG.....................2511.00100000010000
..........................................................................................................................TACCAGTTGATCTTCTGCCTGTGG....................2411.00101000000000
.....................................................................................................................................CTTCTGCCTGTGGGTGCT...............1811.00110000000000
.............................................................................................TAAATTCGATTTCTTATTCATG...................................................2211.00101000000000
..................................................................................................................................GATCTTCTGCCTGTGGGT..................1811.00100001000000
...................................................................................................CGATTTCTTATTCATAGT.................................................1811.00101000000000
..GGAATCAGCACTCTGATCC.................................................................................................................................................1911.00101000000000
.........................................................................................................................ATACCAGTTGATCTTCTGC..........................1911.00101000000000
.............................................................................................TAAATTCGATTTCTTATTCATAAA.................................................2411.00100100000000
....................................................................TGCGTAAATTGTTTG--GTACA............................................................................2011.00100010000000
...........................................................................................TTTAAATTCGATTTCTTATTCATAGT.................................................2611.00101000000000
....................CGTATCCTGTCCACTCGTGTCAA...........................................................................................................................2311.00100000010000
..................................................................................................TCGATTTCTTATTCATAGT.................................................1911.00101000000000
...................................................................................................................................ATCTTCTGCCTGTGGGTGC................1911.00101000000000
.............................................................ATTGAAATGCGTAAATTGTTTG--GTACAA...........................................................................2811.00101000000000
..........CACTCTGATCCGTATCCT..........................................................................................................................................1811.00110000000000
....................................................................TGCGTAAATTGTTTG--GTAC.............................................................................1911.00101000000000
..............................................................................................AAATTCGATTTCTTATTCATAA..................................................2211.00101000000000
droEre2
ACGGAATCAGCACTCTGATCCGTATCCTGTCGACCCGTGTCAACTTCCAGGTGAGTTTGAAATTGAAATGCGTAAATTGTTTG--GTACAATTTAAATTCGATTTCTTATTCATAGGTGCAATACCAGTTGATCTTTTGCTTGTGGGTGCTGACCTTCAATCCCCTSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
.............................................................................................TAAATTCGATTTCTTATTCATAG..................................................2316199.0061995772161873034610
.............................................................................................TAAATTCGATTTCTTATTCAT....................................................2111157.0011575964462224870
.............................................................................................TAAATTCGATTTCTTATTCATAGT.................................................241868.008682741232517330864
.............................................................................................TAAATTCGATTTCTTATTCATA...................................................221744.00744609176610960
..............................................................................................AAATTCGATTTCTTATTCATAG..................................................221503.00503502100000
..................................................GTGAGTTTGAAATTGAAATGCGTAAA..........................................................................................261169.001691430293570
.............................................................................................TAAATTCGATTTCTTATTCA.....................................................201136.00136892202410
.............................................................................................TAAATTCGATTTCTTATTCATAGA.................................................241111.00111903001170
..............................................................................................AAATTCGATTTCTTATTCATA...................................................21176.007674000110
..............................................................................................AAATTCGATTTCTTATTCATAGT.................................................23166.0066303219210
..............................................................................................AAATTCGATTTCTTATTCAT....................................................20162.006254010160
..................................................GTGAGTTTGAAATTGAAATGCGTAA...........................................................................................25152.005272003670
............................................................................................TTAAATTCGATTTCTTATTCATAG..................................................24140.004035010040
..................................................GTGAGTTTGAAATTGAAATGCGT.............................................................................................23138.003880002541
...............................................................................................AATTCGATTTCTTATTCATAG..................................................21137.003737000000
..................................................GTGAGTTTGAAATTGAAATGCG..............................................................................................22132.0032700013120
..................................................GTGAGTTTGAAATTGAAATGCGTA............................................................................................24129.0029201016100
.............................................................................................TAAATTCGATTTCTTATTCATAA..................................................23128.002824000040
............................................................................................TTAAATTCGATTTCTTATTCAT....................................................22125.002513030360
..................................................GTGAGTTTGAAATTGAAATGCGTAAAT.........................................................................................27120.002050101040
............................................................................................TTAAATTCGATTTCTTATTCATA...................................................23113.001311000020
...............................................................................................AATTCGATTTCTTATTCATAGT.................................................22113.00137010230
.............................................................................................TAAATTCGATTTCTTATTCATAT..................................................23112.00126011040
..................................................GTGAGTTTGAAATTGAAATGC...............................................................................................21112.00121000560
...................................................TGAGTTTGAAATTGAAATGCGTAAA..........................................................................................25111.00115000330
.............................................................................................TAAATTCGATTTCTTATTC......................................................19111.00116100040
...................................................TGAGTTTGAAATTGAAATGCGTAAAT.........................................................................................2619.0091000530
................................................................................................ATTCGATTTCTTATTCATAG..................................................2019.0099000000
.............................................................................................TAAATTCGATTTCTTATTCATT...................................................2219.0099000000
..................................................................................................................................GATCTTTTGCTTGTGGGTGCT...............2119.0090102060
.............................................................................................TAAATTCGATTTCTTATTCATATT.................................................2418.0080031040
.............................................................................................TAAATTCGATTTCTTATTCATAGAA................................................2517.0074000030
...................................................TGAGTTTGAAATTGAAATGCGTA............................................................................................2317.0073000310
.............................................................................................TAAATTCGATTTCTTATTCATAGG.................................................2415.0054000001
............................................................................................TTAAATTCGATTTCTTATTCA.....................................................2115.0053010100
.............................................................................................TAAATTCGATTTCTTATTCATAC..................................................2315.0051000040
..................................................GTGAGTTTGAAATTGAAA..................................................................................................1815.0050000140
................................................................................................ATTCGATTTCTTATTCATAGT.................................................2114.0041000210
...............................................................................................AATTCGATTTCTTATTCAT....................................................1914.0044000000
............................................................................................TTAAATTCGATTTCTTATTCATAGT.................................................2514.0042000200
.......CAGCACTCTGATCCGTATCCTGTC.......................................................................................................................................2414.0042100100
..................................................GTGAGTTTGAAATTGAAATGCGTAAAA.........................................................................................2714.0040000220
.............................................................................................TAAATTCGATTTCTTATTCATAAT.................................................2414.0040000040
..............................................................................................AAATTCGATTTCTTATTCATAGA.................................................2314.0044000000
.........GCACTCTGATCCGTATCCTGTC.......................................................................................................................................2213.0030000210
..................................................................................................TCGATTTCTTATTCATAG..................................................1813.0033000000
.........................................................................................................................ATACCAGTTGATCTTTTGCTT........................2113.0030000030
........AGCACTCTGATCCGTATCCTGT........................................................................................................................................2213.0030000300
.............................................................................................TAAATTCGATTTCTTATTCAC....................................................2113.0030000030
..................................................GTGAGTTTGAAATTGAAATGCGTAAATT........................................................................................2813.0031000200
........AGCACTCTGATCCGTATCCTGTC.......................................................................................................................................2313.0032000100
..............................................................................................AAATTCGATTTCTTATTCATAA..................................................2213.0033000000
.............................................................................................TAAATTCGATTTCTTATTCATAAA.................................................2413.0032000010
.............................................................................................TAAATTCGATTTCTTATTCATC...................................................2213.0031110000
..................................................GTGAGTTTGAAATTGAAATG................................................................................................2013.0031000200
........AGCACTCTGATCCGTATCCT..........................................................................................................................................2013.0031002000
...............................................................................................AATTCGATTTCTTATTCATA...................................................2013.0033000000
.............................................................................................TAAATTCGATTTCTTATTCATAGC.................................................2412.0021100000
......................................................GTTTGAAATTGAAATGCGTAAA..........................................................................................2212.0021000010
......................................................................................................................................TTTTGCTTGTGGGTGCTGACCT..........2212.0022000000
....................................................GAGTTTGAAATTGAAATGCGTAA...........................................................................................2312.0022000000
.......CAGCACTCTGATCCGTATCCT..........................................................................................................................................2112.0020000110
...............................GACCCGTGTCAACTTCCAGGTGCA...............................................................................................................2412.0020001100
.....ATCAGCACTCTGATCCGTATCCTGTC.......................................................................................................................................2612.0021000100
.............................................................................................TAAATTCGATTTCTTATT.......................................................1812.0020000110
............................................................................................TTAAATTCGATTTCTTATTCATAA..................................................2412.0021000010
..............................................................................................AAATTCGATTTCTTATTCA.....................................................1912.0022000000
.............................................................................................TAAATTCGATTTCTTATTCAG....................................................2112.0022000000
.............................................................................................TAAATTCGATTTCTTATTCAA....................................................2112.0021000010
...................................................TGAGTTTGAAATTGAAATGCGT.............................................................................................2212.0021000100
.................................................................................................TTCGATTTCTTATTCATAG..................................................1912.0022000000
............................................................................................TTAAATTCGATTTCTTATTC......................................................2012.0022000000
.............................................................................................TAAATTCGATTTCTTATTCATAGAAA...............................................2612.0022000000
...................................................................ATGCGTAAATTGTTTG--GTAC.............................................................................2011.0010000100
..................................................................................................................................GATCTTTTGCTTGTGGGTGCTGAC............2411.0010000010
...............................................................TGAAATGCGTAAATTGTTTG--GTACAAT..........................................................................2711.0010000010
............................................................AATTGAAATGCGTAAATTGTTTG--GTACA............................................................................2811.0010000100
...........ACTCTGATCCGTATCCTGTC.......................................................................................................................................2011.0011000000
...............................................................................................................................GTTGATCTTTTGCTTGTGG....................1911.0011000000
....................................................GAGTTTGAAATTGAAATGCGTAAA..........................................................................................2411.0011000000
.................................................................................................TTCGATTTCTTATTCATAGAA................................................2111.0010000010
.........................................................................................................................ATACCAGTTGATCTTTTGCT.........................2011.0010100000
..............................................................................................................................AGTTGATCTTTTGCTTGTGGGT..................2211.0010000010
............CTCTGATCCGTATCCTGT........................................................................................................................................1811.0010000010
.............................................................................................TAAATTCGATTTCTTATTCATATA.................................................2411.0011000000
............CTCTGATCCGTATCCTGTCGACCCGT................................................................................................................................2611.0010100000
.............TCTGATCCGTATCCTGTCGACCCGTGT..............................................................................................................................2711.0010000100
.CGGAATCAGCACTCTGATCC.................................................................................................................................................2011.0010100000
..........CACTCTGATCCGTATCCTGT........................................................................................................................................2011.0010001000
............CTCTGATCCGTATCCTGTC.......................................................................................................................................1911.0010100000
.......................ATCCTGTCGACCCGTGTCAA...........................................................................................................................2011.0010000100
.............................................................................................TAAATTCGATTTCTTATTCATAGTA................................................2511.0010000010
..............................................................................GTTTG--GTACAATTTAAATTCGATT..............................................................2411.0011000000
................GATCCGTATCCTGTCGACCCGT................................................................................................................................2211.0010100000
...............................GACCCGTGTCAACTTCCAG....................................................................................................................1911.0011000000
.............................................................................................TAAATTCGATTTCTTATTCATAGTAA...............................................2611.0011000000
..................................................GTGAGTTTGAAATTGAAATGT...............................................................................................2111.0010000100
.............................................................................................TAAATTCGATTTCTTATTCATCT..................................................2311.0010010000
.......................................................TTTGAAATTGAAATGCGTAAA..........................................................................................2111.0010000010
...................................................TGAGTTTGAAATTGAAATGCGTAAATA........................................................................................2711.0010000100
................GATCCGTATCCTGTCGACCCGTGT..............................................................................................................................2411.0011000000
..........................................................................................................................TACCAGTTGATCTTTTGCTTGTGGGT..................2611.0011000000
......TCAGCACTCTGATCCGTATCCTGTC.......................................................................................................................................2511.0010000100
.....................GTATCCTGTCGACCCGTGT..............................................................................................................................1911.0011000000
.............................................................ATTGAAATGCGTAAATTGTTTG--GTAC.............................................................................2611.0010000100
.......................................................................GTAAATTGTTTG--GTACAAT..........................................................................1911.0011000000
................................................................................................ATTCGATTTCTTATTCATA...................................................1911.0011000000
.............................................................ATTGAAATGCGTAAATTGTTTG--G................................................................................2311.0010000100
...............................GACCCGTGTCAACTTCCAGGTGC................................................................................................................2311.0010001000
...............................................................................................................................GTTGATCTTTTGCTTGTGGGTGCT...............2411.0010000100
.............................................................................................TAAATTCGATTTCTTATTCATG...................................................2211.0011000000
............................................................................TTGTTTG--GTACAATTTAAATTCGATTT.............................................................2711.0011000000
.............................................................................................................................CAGTTGATCTTTTGCTTGTGGGTGCT...............2611.0010000010
........AGCACTCTGATCCGTATCCTGTCGACCC..................................................................................................................................2811.0011000000
.........................................................................................................................ATACCAGTTGATCTTTTGCTTGT......................2311.0010010000
..................................................GTGAGTTTGAAATTGAAATGCGTAAAC.........................................................................................2711.0010010000

Generated: 10/20/2015 at 10:28 PM