ID:

dpe_303

 Coordinate:

scaffold_190:30574-30668 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-34.2 -33.8 -33.8

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
Gypsy13-I_Dpse-intLTRGypsy+
mature
  1. dpe_303  scaffold_190:30644-30667 +
  2. dpe_302  scaffold_253:5975-5998 +
star
  1. dpe_303  scaffold_190:30574-30599 +
  2. dpe_302  scaffold_253:5905-5930 +

Sense Strand Reads

GCGAGCCTAGGAAGGGCTATGTAGCGTAGCCAGAGCACAATCAAGAACAGTCCGAGATTGGGCGGGTTCTTCCGAGTGGCATCGCGAGTGATTTCATCGTCGGAAACAGTCCGATTGCGGAAGGGAAAGACCATAGAGATCGGGAAGGCAGAAATCTGCAAAAATAATATGTGGTGTTGTTAAGTGTTCAATGTT
***********************************...............(((..((((.....((((.((((.....((((((.((.((.((((......)))).)).))))).))).....)))).)))).....)))).)))..((((....))))************************************ 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 M021
embryo
 V042
embryo
 V057
head
........................................................................................................................AAGGGAAAGACCATAGAGATCGGG................................................... 24 0 2 13.50 27 25 0 2 0
........................................................................................................................AAGGGAAAGACCATAGAGATCGG.................................................... 23 0 2 9.00 18 18 0 0 0
........................................................................................................................AAGGGAAAGACCATAGAGATCGGGA.................................................. 25 0 2 8.50 17 17 0 0 0
........................................TCAAGAACAGTCCGAGATTGGGC.................................................................................................................................... 23 0 2 8.50 17 15 1 1 0
........................................TCAAGAACAGTCCGAGATTGGG..................................................................................................................................... 22 0 2 8.50 17 16 1 0 0
........................................TCAAGAACAGTCCGAGATTGGGCGG.................................................................................................................................. 25 0 2 8.00 16 16 0 0 0
........................................TCAAGAACAGTCCGAGATTGGGCG................................................................................................................................... 24 0 2 6.00 12 12 0 0 0
........................................TCAAGAACAGTCCGAGATTGG...................................................................................................................................... 21 0 2 5.00 10 9 0 1 0
..........................................................................................................................................................TCTGCAAAAATAATATGTGGTGTTGT............... 26 0 2 4.50 9 9 0 0 0
.........................................................................................................................AGGGAAAGACCATAGAGATCGG.................................................... 22 0 2 4.00 8 8 0 0 0
........................................................................................................................AAGGGAAAGACCATAGAGATCG..................................................... 22 0 2 3.50 7 6 1 0 0
.........................................................................................................................AGGGAAAGACCATAGAGATCGGGA.................................................. 24 0 2 2.50 5 5 0 0 0
........................................TCAAGAACAGTCCGAGATTGGGCGGG................................................................................................................................. 26 0 2 2.50 5 5 0 0 0
.........................................................................................................................AGGGAAAGACCATAGAGATCGGGAAG................................................ 26 0 2 2.00 4 4 0 0 0
........................................................................................................................AAGGGAAAGACCATAGAGATCGGGAAG................................................ 27 0 2 2.00 4 3 1 0 0
........................................................................................................................AAGGGAAAGACCATAGAGATCGGGAA................................................. 26 0 2 2.00 4 4 0 0 0
........................................................................................................................AAGGGAAAGACCATAGAGATC...................................................... 21 0 2 1.50 3 1 2 0 0
.........................................CAAGAACAGTCCGAGATTGGG..................................................................................................................................... 21 0 2 1.50 3 3 0 0 0
........................................TCAAGAACGGTCCGAGATTGGG..................................................................................................................................... 22 1 2 1.00 2 2 0 0 0
..................................................TCCGAGATTGGGCGGGTTCTTCCGAG....................................................................................................................... 26 0 2 1.00 2 2 0 0 0
.......................................ATCAAGAACAGTCCGAGATTGGG..................................................................................................................................... 23 0 2 1.00 2 2 0 0 0
.................TATGTAGCGTAGCCAGAGCAC............................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0
.................TATGTAGCGTAGCCAGAGCACAA........................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0
........................................TCAAGAACGGTCCGAGATTGGGC.................................................................................................................................... 23 1 2 1.00 2 2 0 0 0
..................................................................................CGCGAGTGATTTCATCGTCGGA........................................................................................... 22 0 2 1.00 2 2 0 0 0
........................................TCAAGAACAGTCCGAGATTGGGCGGGT................................................................................................................................ 27 0 2 1.00 2 2 0 0 0
.........................................................................................................................AGGGAAAGACCATAGAGATCG..................................................... 21 0 2 1.00 2 2 0 0 0
.................TATGTAGCGTAGCCAGAGCACAATC......................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0
........................................TCAAGAACAGTCCGAGATTG....................................................................................................................................... 20 0 2 0.50 1 1 0 0 0
........................................TCAAGAACATTCCGAGATTGGGCGG.................................................................................................................................. 25 1 2 0.50 1 1 0 0 0
...........................................................................................................................................................CTGCAAAAATAATATGTGGTGTTGT............... 25 0 2 0.50 1 1 0 0 0
.........................................................................................................................AGGGAAAGACCATAGAGATCGGG................................................... 23 0 2 0.50 1 1 0 0 0
..........................................................................................................................................................................GTGGTGTTGTTAAGTGTTCA..... 20 0 2 0.50 1 1 0 0 0
........................................................................................................................AAGGGAAAGACCAAAGAGATCG..................................................... 22 1 2 0.50 1 0 1 0 0
.......................................ATCAAGAACAGTCCGAGATTGGGC.................................................................................................................................... 24 0 2 0.50 1 1 0 0 0
........................................................................................................................AAGGGAAACACCATAGAGATCGG.................................................... 23 1 2 0.50 1 1 0 0 0
.........................................................................................................................AGGGAAAGACCATAGAGATCGGA................................................... 23 1 2 0.50 1 0 1 0 0
...............................................................................CATCGCGAGTGATTTCATCG................................................................................................ 20 0 2 0.50 1 0 1 0 0
........................................................................................................................AAGGGAAAAACCATAGAGATCGGGA.................................................. 25 1 2 0.50 1 1 0 0 0
.........................................CAAGAACAGTCCGAGATTGGGCGG.................................................................................................................................. 24 0 2 0.50 1 1 0 0 0
...................................................................TCTTCCGAGTGGCATCGCGAGTGAT....................................................................................................... 25 0 2 0.50 1 1 0 0 0
.......................................................................................................................................................................TATGTGGTGTTGTTAAGTGTT....... 21 0 2 0.50 1 1 0 0 0
.......................................................................................................................................................................TATGTGGTGTTGTTAAGTGTTCAATGT. 27 0 2 0.50 1 1 0 0 0
............................................................................TGGCATCGCGAGTGATTTCATCGTCG............................................................................................. 26 0 2 0.50 1 1 0 0 0
............................................................................TGGCATCGCGAGTGATTTCATCGTC.............................................................................................. 25 0 2 0.50 1 1 0 0 0
..................................GCACAATCAAGAACAGTCCGAG........................................................................................................................................... 22 0 2 0.50 1 0 0 1 0
.............................................................................................................TCCGATTGCGGAAGGGAAAGACCATA............................................................ 26 0 2 0.50 1 1 0 0 0
........................................TCAAGAACAGTCCGAGATTGGGT.................................................................................................................................... 23 1 2 0.50 1 0 0 1 0
........................................................................................................................AAGGGAAAGACCATAGAGAT....................................................... 20 0 2 0.50 1 0 1 0 0
........................................................................................................................AAGGGAAAGACCATAGAGATCCGG................................................... 24 1 2 0.50 1 1 0 0 0
........................................TCAAGAACGGTCCGAGATTGGGCGG.................................................................................................................................. 25 1 2 0.50 1 1 0 0 0
................................................................................ATCGCGAGTGATTTCATCGTCG............................................................................................. 22 0 2 0.50 1 0 1 0 0
..........................................................................................................................GGGAAAGACCATAGAGATCGG.................................................... 21 0 2 0.50 1 1 0 0 0
...........................................................................................................................................................CTGCAAAAATAATATGTGGTGTTG................ 24 0 2 0.50 1 1 0 0 0
.........................................CAAGAACAGTCCGAGATTG....................................................................................................................................... 19 0 2 0.50 1 1 0 0 0
.............................................................................GGCATCGCGAGTGATTTCATCGTCGGAA.......................................................................................... 28 0 2 0.50 1 0 1 0 0
........................................TCAAGAACAGTCCGAGATTGGGAA................................................................................................................................... 24 2 2 0.50 1 1 0 0 0
........................................................................................................................AAGGGAAATACCATAGAGATCGGG................................................... 24 1 2 0.50 1 1 0 0 0
..........................................................................................................................GGGAAAGACCATAGAGATC...................................................... 19 0 2 0.50 1 1 0 0 0
...................................................................TCTTCCGAGTGGCATCGCGAGTG......................................................................................................... 23 0 2 0.50 1 1 0 0 0
........................................................................................................................GAGGGAAAGACCATAGAGATCGGGAAG................................................ 27 1 2 0.50 1 1 0 0 0
........................................TCAAGAACAGACCGAGATTGGG..................................................................................................................................... 22 1 2 0.50 1 0 0 1 0
........................................TCAAGAACTGTCCGAGATTGGG..................................................................................................................................... 22 1 2 0.50 1 1 0 0 0
........................................TCAAGAACAGTCCGAGATTAGG..................................................................................................................................... 22 1 2 0.50 1 1 0 0 0
..........................................................................................................................................................TCTGCAAATATAATATGTGGTGTTGT............... 26 1 2 0.50 1 1 0 0 0
..........................................................TGGGCGGGTTCTTCCGAGTGGC................................................................................................................... 22 0 2 0.50 1 1 0 0 0
.........................................CAAGAACAGTCCGAGATTGGGC.................................................................................................................................... 22 0 2 0.50 1 1 0 0 0
...................................................................................GCGAGTGATTTCATCGTCGGAAAC........................................................................................ 24 0 2 0.50 1 1 0 0 0
.................................................................................TCGCGAGTGATTTCATCGTCGGAAA......................................................................................... 25 0 2 0.50 1 1 0 0 0
........................................................................................................................AAGGGAAAGACCATAGAGATCGAGAAG................................................ 27 1 2 0.50 1 1 0 0 0
.................................................................................................................................................................AAATAATATGTGGTGTTGTTAAGT.......... 24 0 2 0.50 1 1 0 0 0
............................................................................................................................................................TGCAAAAATAATATGTGGTGTTG................ 23 0 2 0.50 1 1 0 0 0
...................................................................TCTTCCGAGTGGCATCGCGAGTGA........................................................................................................ 24 0 2 0.50 1 1 0 0 0
........................................................................................................................AAGGGAAACACCATAGAGATCGGGAA................................................. 26 1 2 0.50 1 1 0 0 0
...........................................................................................TTTCATCGTCGGAAACAGTCCGAT................................................................................ 24 0 2 0.50 1 1 0 0 0
.........................................................................................................................AGGGAAAGACCATAGAGATCA..................................................... 21 1 2 0.50 1 1 0 0 0
..........................................................................................................................................................TCTGCAAAAATAATATGTGGTGTTG................ 25 0 2 0.50 1 1 0 0 0
......................................................................TCCGAGTGGCATCGCGAGTG......................................................................................................... 20 0 2 0.50 1 1 0 0 0
..................................................................................CGCGAGTGATTTCATCGTCGGAAA......................................................................................... 24 0 2 0.50 1 1 0 0 0
......................................................................................AGTGATTTCATCGTCGGAAACAGTC.................................................................................... 25 0 2 0.50 1 1 0 0 0
...................................................................TCTTCCGAGTGGCATCGCGAGT.......................................................................................................... 22 0 2 0.50 1 1 0 0 0
...................................................................TCTTCCGAGTGGCATCGCGAG........................................................................................................... 21 0 2 0.50 1 1 0 0 0
........................................................................................................................GAGGGAAAGACCATAGAGATCGGGA.................................................. 25 1 2 0.50 1 1 0 0 0
........................................................................................................................AAGGGAAAGACCATAGAGATCGGGAT................................................. 26 1 2 0.50 1 0 1 0 0
........................................TCAAGAACAGTCCGAGATTGAA..................................................................................................................................... 22 2 2 0.50 1 1 0 0 0
.........................................................................................................................AGGGAAAGACCATAGAGATCGGGAAGG............................................... 27 0 2 0.50 1 1 0 0 0
........................................TCAAGAACGGTCCGAGATTGGGCG................................................................................................................................... 24 1 2 0.50 1 1 0 0 0
..................................................TCCGAGATTGGGCGGGTTCTTCCGAGT...................................................................................................................... 27 0 2 0.50 1 1 0 0 0
..........................TAGCCAGAGCACAATCAAGAACAGTC............................................................................................................................................... 26 0 2 0.50 1 1 0 0 0
....................................................................................................CGGAAACAGTCCGATTGCGGA.......................................................................... 21 0 3 0.33 1 1 0 0 0
..............................................................................................CATCGTCGGAAACAGTCCGATTGC............................................................................. 24 0 3 0.33 1 0 0 1 0
.......................................................................................................AAACAGTCCGATTGCGGAAGG....................................................................... 21 0 3 0.33 1 1 0 0 0
...................................................................................................TCGGAAACAGTCCGATTGCGGAAGGGA..................................................................... 27 0 3 0.33 1 1 0 0 0
...................................................................................................TCGGAAACAGTCCGATTGCGGAAGGGAA.................................................................... 28 0 3 0.33 1 1 0 0 0
...........................................................................................TTTCAGCGTGGTAAACAGTC.................................................................................... 20 3 11 0.09 1 0 0 0 1

Anti-sense strand reads

CGCTCGGATCCTTCCCGATACATCGCATCGGTCTCGTGTTAGTTCTTGTCAGGCTCTAACCCGCCCAAGAAGGCTCACCGTAGCGCTCACTAAAGTAGCAGCCTTTGTCAGGCTAACGCCTTCCCTTTCTGGTATCTCTAGCCCTTCCGTCTTTAGACGTTTTTATTATACACCACAACAATTCACAAGTTACAA
************************************...............(((..((((.....((((.((((.....((((((.((.((.((((......)))).)).))))).))).....)))).)))).....)))).)))..((((....))))*********************************** 		Read size # Mismatch Hit Count Total Norm Total M042
female body
 M021
embryo
 V042
embryo
 V111
male body
........................................................................................................TTGTCAGGCTAACGCCTTCCCTTTCT................................................................. 26 0 3 88.67 266 261 5 0 0
..........................................................................................................GTCAGGCTAACGCCTTCCCTTTCT................................................................. 24 0 3 46.00 138 112 24 2 0
............................CGGTCTCGTGTTAGTTCTTGTC................................................................................................................................................. 22 0 2 43.00 86 82 2 2 0
..........................ATCGGTCTCGTGTTAGTTCTTGTC................................................................................................................................................. 24 0 2 40.00 80 78 1 1 0
.........................CATCGGTCTCGTGTTAGTTCTTGTC................................................................................................................................................. 25 0 2 37.50 75 50 22 3 0
.........................................................................................................TGTCAGGCTAACGCCTTCCCTTTCT................................................................. 25 0 3 36.33 109 105 1 3 0
...........................TCGGTCTCGTGTTAGTTCTTGTC................................................................................................................................................. 23 0 2 28.00 56 39 15 2 0
........................GCATCGGTCTCGTGTTAGTTCTTGTC................................................................................................................................................. 26 0 2 21.50 43 43 0 0 0
............................................................................................................CAGGCTAACGCCTTCCCTTTCTG................................................................ 23 0 3 20.00 60 58 2 0 0
.............................GGTCTCGTGTTAGTTCTTGTC................................................................................................................................................. 21 0 2 16.00 32 32 0 0 0
........................................................................................................TTGTCAGGCTAACGCCTTCCCTTTCTG................................................................ 27 0 3 15.33 46 45 1 0 0
.......................CGCATCGGTCTCGTGTTAGTTCTTGTC................................................................................................................................................. 27 0 2 13.50 27 26 0 0 1
................................................................CCAAGAAGGCTCACCGTAGCGCTCACTA....................................................................................................... 28 0 2 12.50 25 11 14 0 0
.......................CGCATCGGTCTCGTGTTAGTTCTTGT.................................................................................................................................................. 26 0 2 12.50 25 18 7 0 0
..................................................................AAGAAGGCTCACCGTAGCGCTCACTA....................................................................................................... 26 0 2 12.50 25 20 5 0 0
.................................................................CAAGAAGGCTCACCGTAGCGCTCACTA....................................................................................................... 27 0 2 11.00 22 15 7 0 0
.....................................................................AAGGCTCACCGTAGCGCTCACTAAA..................................................................................................... 25 0 2 10.00 20 20 0 0 0
..........................................................................................................GTCAGGCTAACGCCTTCCCTTTCTG................................................................ 25 0 3 9.33 28 28 0 0 0
.................................................CAGGCTCTAACCCGCCCAAGAAGGCT........................................................................................................................ 26 0 2 9.00 18 10 8 0 0
...........................................................................................................TCAGGCTAACGCCTTCCCTTTCT................................................................. 23 0 3 8.67 26 11 15 0 0
........................................................................................................TTGTCAGGCTAACGCCTTCCCTTTC.................................................................. 25 0 3 8.33 25 25 0 0 0
............................................................................................................CAGGCTAACGCCTTCCCTTTCT................................................................. 22 0 3 8.33 25 12 13 0 0
.....................................................................AAGGCTCACCGTAGCGCTCACTA....................................................................................................... 23 0 2 8.00 16 16 0 0 0
.........................CATCGGTCTCGTGTTAGTTCTTGT.................................................................................................................................................. 24 0 2 7.50 15 11 1 3 0
........................GCATCGGTCTCGTGTTAGTTCTTGT.................................................................................................................................................. 25 0 2 7.00 14 14 0 0 0
........................................................................................................TTGTCAGGCTAACGCCTGCCCTTTCT................................................................. 26 1 3 6.67 20 20 0 0 0
................................CTCGTGTTAGTTCTTGTCAGGCTCT.......................................................................................................................................... 25 0 2 6.50 13 10 3 0 0
...................................................................AGAAGGCTCACCGTAGCGCTCACTA....................................................................................................... 25 0 2 6.00 12 10 2 0 0
....................................................................GAAGGCTCACCGTAGCGCTCACTA....................................................................................................... 24 0 2 6.00 12 8 4 0 0
....CGGATCCTTCCCGATACATCGCAT....................................................................................................................................................................... 24 0 1 5.00 5 5 0 0 0
.........................................................................................................TGTCAGGCTAACGCCTTCCCTTTCTG................................................................ 26 0 3 5.00 15 15 0 0 0
.........................................................................................................TGTCAGGCTAACGCCTTCCCTTTC.................................................................. 24 0 3 4.67 14 14 0 0 0
......................................................................AGGCTCACCGTAGCGCTCACTAAA..................................................................................................... 24 0 2 4.50 9 9 0 0 0
............................CGGTCTCGTGTTAGTTCTTGTCAGGCT............................................................................................................................................ 27 0 2 4.50 9 9 0 0 0
..............................GTCTCGTGTTAGTTCTTGTC................................................................................................................................................. 20 0 2 4.50 9 7 0 2 0
.......................................................................GGCTCACCGTAGCGCTCACTAAA..................................................................................................... 23 0 2 4.50 9 8 0 1 0
............................CGGTCTCGTGTTAGTTCTTGT.................................................................................................................................................. 21 0 2 4.50 9 9 0 0 0
.............................................................................CCGTAGCGCTCACTAAAGTAGCAGCCT........................................................................................... 27 0 2 4.00 8 8 0 0 0
.......................................TAGTTCTTGTCAGGCTCTAACCCGCCC................................................................................................................................. 27 0 2 4.00 8 0 8 0 0
..................................CGTGTTAGTTCTTGTCAGGCTCT.......................................................................................................................................... 23 0 2 4.00 8 1 7 0 0
.............CCCGATACATCGCATCGGTCTCGTGT............................................................................................................................................................ 26 0 1 4.00 4 4 0 0 0
...........................................................................CACCGTAGCGCTCACTAAAGTAGCAGCCT........................................................................................... 29 0 2 3.50 7 7 0 0 0
..........................ATCGGTCTCGTGTTAGTTCTTGT.................................................................................................................................................. 23 0 2 3.50 7 7 0 0 0
............................CGGTCTCGTGTTAGTTCTTGTCA................................................................................................................................................ 23 0 2 3.50 7 7 0 0 0
......................................................................................................................................................................TATACACCACAACAATTCACAAGT..... 24 0 2 3.50 7 5 2 0 0
..............................................................................................GTAGCAGCCTTTGTCAGGCTAACGCCT.......................................................................... 27 0 3 3.00 9 3 6 0 0
...............................................................CCCAAGAAGGCTCACCGTAGCGCTCACTA....................................................................................................... 29 0 2 3.00 6 1 5 0 0
..............................................................................CGTAGCGCTCACTAAAGTAGCAGCCT........................................................................................... 26 0 2 3.00 6 6 0 0 0
..........................................................................................................GTCAGGCTAACGCCTTCCCTTTC.................................................................. 23 0 3 2.67 8 8 0 0 0
....................................................................AAAGGCTCACCGTAGCGCTCACTAAA..................................................................................................... 26 1 2 2.50 5 5 0 0 0
...............................................................CCCAAGAAGGCTCACCGTAGCGCTCAC......................................................................................................... 27 0 2 2.50 5 1 4 0 0
..............................GTCTCGTGTTAGTTCTTGTCAGGCT............................................................................................................................................ 25 0 2 2.50 5 5 0 0 0
......................................................................AGGCTCACCGTAGCGCTCACTAAAGT................................................................................................... 26 0 2 2.50 5 5 0 0 0
.........................................................................................................TGTCAGGCTAACGCCTACCCTTTCT................................................................. 25 1 3 2.33 7 7 0 0 0
.GCTCGGATCCTTCCCGATACAT............................................................................................................................................................................ 22 0 1 2.00 2 2 0 0 0
.....................................................................AAGGCTCACCGTAGCGCTCACTAAAGT................................................................................................... 27 0 2 2.00 4 4 0 0 0
...................ACATCGCATCGGTCTCGTGTTAGT........................................................................................................................................................ 24 0 1 2.00 2 2 0 0 0
...........................TCGGTCTCGTGTTAGTTCTTGT.................................................................................................................................................. 22 0 2 2.00 4 4 0 0 0
...............................TCTCGTGTTAGTTCTTGTCAGGCTCT.......................................................................................................................................... 26 0 2 2.00 4 2 2 0 0
.......................................TAGTTCTTGTCAGGCTCTAACCCGC................................................................................................................................... 25 0 2 2.00 4 0 4 0 0
.............................GGTCTCGTGTTAGTTCTTGTCAGGCT............................................................................................................................................ 26 0 2 2.00 4 4 0 0 0
.......................................................................GGCTCACCGTAGCGCTCACTA....................................................................................................... 21 0 2 2.00 4 4 0 0 0
................................................................CCAAGAAGGCTCACCGTAGCGCTCACT........................................................................................................ 27 0 2 2.00 4 4 0 0 0
................................................ACAGGCTCTAACCCGCCCAAGAAGGCT........................................................................................................................ 27 1 2 2.00 4 1 3 0 0
..............................................................................................................GGCTAACGCCTTCCCTTTCTG................................................................ 21 0 3 1.67 5 5 0 0 0
...........................................................................................................TCAGGCTAACGCCTTCCCTTTCTG................................................................ 24 0 3 1.67 5 5 0 0 0
..........................................................................................................GTCAGGCTAACGCCTGCCCTTTCT................................................................. 24 1 3 1.67 5 5 0 0 0
.................................................................................AGCGCTCACTAAAGTAGCAGCCT........................................................................................... 23 0 2 1.50 3 3 0 0 0
......................................................................AGGCTCACCGTAGCGCTCACTA....................................................................................................... 22 0 2 1.50 3 3 0 0 0
.................................................................AAAGAAGGCTCACCGTAGCGCTCACTA....................................................................................................... 27 1 2 1.50 3 3 0 0 0
.......................................TAGTTCTTGTCAGGCTCTAACCCG.................................................................................................................................... 24 0 2 1.50 3 0 3 0 0
............................................................................ACCGTAGCGCTCACTAAAGTAGCAGCCT........................................................................................... 28 0 2 1.50 3 3 0 0 0
...............................TCTCGTGTTAGTTCTTGTCAGGCT............................................................................................................................................ 24 0 2 1.50 3 2 1 0 0
.......................CGCATCGGTCTCGTGTTAGTTCTTG................................................................................................................................................... 25 0 2 1.50 3 0 3 0 0
..................................CGTGTTAGTTCTTGTCAGGCTCTAAC....................................................................................................................................... 26 0 2 1.50 3 3 0 0 0
............................CGGTCTCGTGTTACTTCTTGTC................................................................................................................................................. 22 1 2 1.50 3 3 0 0 0
....................................................GCTCTAACCCGCCCAAGAAGGCTCACC.................................................................................................................... 27 0 2 1.50 3 0 3 0 0
.....................................GTTAGTTCTTGTCAGGCTCTAACCCGC................................................................................................................................... 27 0 2 1.50 3 0 3 0 0
...........................................................................................................TCAGGCTAACGCCTTCCCTTTCTGGTAT............................................................ 28 0 2 1.50 3 0 3 0 0
........................CCATCGGTCTCGTGTTAGTTCTTGTC................................................................................................................................................. 26 1 2 1.50 3 0 3 0 0
.....................................................................AAGGCTCACCGTAGCGCTCACTAA...................................................................................................... 24 0 2 1.50 3 3 0 0 0
........................................................................................................TTGTCAGGCTAACGCCTACCCTTTCT................................................................. 26 1 3 1.33 4 4 0 0 0
.........................................................................................................TGTCAGGCTAACGCCTGCCCTTTCT................................................................. 25 1 3 1.33 4 4 0 0 0
.........................................................................................................................................CTAGCCCTTCCGTCTTTAGACGTTTTT............................... 27 0 3 1.33 4 4 0 0 0
........................................................................................................TTGTCAGTCTAACGCCTTCCCTTTCT................................................................. 26 1 3 1.00 3 0 3 0 0
............................CGGTCTCGTGTTAGTTCTT.................................................................................................................................................... 19 0 2 1.00 2 2 0 0 0
..........................ATCGGTCTCGTGTTAGTTCTTGTCA................................................................................................................................................ 25 0 2 1.00 2 2 0 0 0
.........................AATCGGTCTCGTGTTAGTTCTTGTC................................................................................................................................................. 25 1 2 1.00 2 2 0 0 0
..................................................................................GCGCTCACTAAAGTAGCAGCCT........................................................................................... 22 0 2 1.00 2 2 0 0 0
...........................................................................................................TCAGGCTAACGCCTTCCCTT.................................................................... 20 0 3 1.00 3 0 3 0 0
...............................................................AACAAGAAGGCTCACCGTAGCGCTCACT........................................................................................................ 28 2 2 1.00 2 0 2 0 0
...............................................................................GTAGCGCTCACTAAAGTAGCAGCCT........................................................................................... 25 0 2 1.00 2 2 0 0 0
.......................................................................................................TTTGTCAGGCTAACGCCTTCCCTTTCT................................................................. 27 0 3 1.00 3 3 0 0 0
...........................TCGGTCTCGTTTTAGTTCTTGTC................................................................................................................................................. 23 1 2 1.00 2 0 2 0 0
.............................GGTCTCGTGTTAGTTCTTGT.................................................................................................................................................. 20 0 2 1.00 2 2 0 0 0
.................................TCGTGTTAGTTCTTGTCAGGCTCT.......................................................................................................................................... 24 0 2 1.00 2 1 1 0 0
...........................................TCTTGTCAGGCTCTAACCCGCCCAAG.............................................................................................................................. 26 0 2 1.00 2 2 0 0 0
.............................................TTGTCAGGCTCTAACCCGCCCAAG.............................................................................................................................. 24 0 2 1.00 2 0 2 0 0
.........................................................................................................................................CTAGCCCTTCCGTCTTTAGACGTTTT................................ 26 0 3 1.00 3 2 1 0 0
....................CATCGCATCGGTCTCGTGTTAGT........................................................................................................................................................ 23 0 1 1.00 1 1 0 0 0
.....GGATCCTTCCCGATACAT............................................................................................................................................................................ 18 0 1 1.00 1 1 0 0 0
..................TACATCGCATCGGTCTCGTGTT........................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0
...................ACATCGCATCGGTCTCGTGTTAG......................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0
...........................CCGGTCTCGTGTTAGTTCTTGTC................................................................................................................................................. 23 1 2 1.00 2 0 2 0 0
.......................................................CTAACCCGCCCAAGAAGGCTCACCGT.................................................................................................................. 26 0 2 1.00 2 2 0 0 0
......................................................................AGGCTCACCGTAGCGCTCACTAAAG.................................................................................................... 25 0 2 1.00 2 2 0 0 0
.........................................................................................................................................CTAGCCCTTCCGTCTTTAGACGTT.................................. 24 0 3 1.00 3 3 0 0 0
...............................TCTCGTGTTAGTTCTTGTC................................................................................................................................................. 19 0 2 1.00 2 2 0 0 0
........................................................................................................TTGTCAGGCTAACGCCTTCCCTTT................................................................... 24 0 3 1.00 3 3 0 0 0
.......................................................................GGCTCACCGTAGCGCTCACTAAAGT................................................................................................... 25 0 2 1.00 2 2 0 0 0
...................................................GGCTCTAACCCGCCCAAGAAGGCT........................................................................................................................ 24 0 2 1.00 2 2 0 0 0
............TCCCGATACATCGCATCGGTCTCGTGT............................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0
.................................................................CAAGAAGGCTCACCGTAGCGCTCAC......................................................................................................... 25 0 2 1.00 2 2 0 0 0
CGCTCGGATCCTTCCCGATACAT............................................................................................................................................................................ 23 0 1 1.00 1 1 0 0 0
......................................................................................................CTTTGTCAGGCTAACGCCTTCCCTTTCT................................................................. 28 0 3 1.00 3 3 0 0 0
..................................................AGGCTCTAACCCGCCCAAGAAGGCT........................................................................................................................ 25 0 2 1.00 2 0 2 0 0
.........................CATCGGTCTCGTGTTAATTCTTGTC................................................................................................................................................. 25 1 2 1.00 2 2 0 0 0
.............CCCGATACATCGCATCGGTCTCGTGTT........................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0
........................GCATCGGTCTCGTGTTCGTTCTTGT.................................................................................................................................................. 25 1 2 1.00 2 2 0 0 0
.........................................................AACCCGCCCAAGAAGGCTCAC..................................................................................................................... 21 0 2 1.00 2 2 0 0 0
............TCCCGATACATCGCATCGGTCTCGTGTT........................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0
.............................GGTCTCGTGTTAGTTCTTGTCAGGCTCT.......................................................................................................................................... 28 0 2 1.00 2 2 0 0 0
.....................................GTTAGTTCTTGTCAGGCTCTAACCC..................................................................................................................................... 25 0 2 1.00 2 2 0 0 0
....................................................GCTCTAACCCGCCCAAGAAGGCTCAC..................................................................................................................... 26 0 2 1.00 2 1 1 0 0
..........................................................................................................................................................AGACGTTTTTATTATACACCACAACAAT............. 28 0 2 1.00 2 2 0 0 0
......GATCCTTCCCGATACATCGCAT....................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0
.............................................................................................................AGGCTAACGCCTTCCCTTTCTG................................................................ 22 0 3 1.00 3 3 0 0 0
TGCTCGGATCCTTCCCGATACAT............................................................................................................................................................................ 23 1 1 1.00 1 1 0 0 0
.....................................................................TAGGCTCACCGTAGCGCTCACTAAA..................................................................................................... 25 1 2 1.00 2 2 0 0 0
............................CGGTCTCGTGTTAGTTCTTGTCAGGC............................................................................................................................................. 26 0 2 1.00 2 2 0 0 0
...........................................................................................................TCAGGCTAACGCCTTCCCTTTC.................................................................. 22 0 3 1.00 3 3 0 0 0
...........................................................................................................................................AGCCCTTCCGTCTTTAGACGTTTT................................ 24 0 3 0.67 2 2 0 0 0
........................................................................................................................................TCTAGCCCTTCCGTCTTTAGACGTT.................................. 25 0 3 0.67 2 2 0 0 0
................................................................................................AGCAGCCTTTGTCAGGCTAACGCCT.......................................................................... 25 0 3 0.67 2 1 1 0 0
......................................................................................................CTTTGTCAGGCTAACGCCTTCCCTTTCTG................................................................ 29 0 3 0.67 2 2 0 0 0
.........................................................................................................TGTCAGGCTAACGCCTTACCTTTCTG................................................................ 26 1 3 0.67 2 2 0 0 0
.................................................................................................GCAGCCTTTGTCAGGCTAACGCCTTC........................................................................ 26 0 3 0.67 2 0 2 0 0
.................................................................................................GCAGCCTTTGTCAGGCTAACGCCT.......................................................................... 24 0 3 0.67 2 2 0 0 0
..........................................................................................................GTCAGGCTAACGCCGTCCCTTTC.................................................................. 23 1 3 0.67 2 2 0 0 0
........................................................................................................................................TCTAGCCCTTCCGTCTTTAGACGT................................... 24 0 3 0.67 2 2 0 0 0
............................................................................................................CAGGCTAACGCCTTCCCTTT................................................................... 20 0 3 0.67 2 0 2 0 0
...........................................................................................................CCAGGCTAACGCCTTCCCTTT................................................................... 21 1 3 0.67 2 0 2 0 0
...........................................................................................................ACAGGCTAACGCCTTCCCTTTCTG................................................................ 24 1 3 0.67 2 2 0 0 0
.......................................................................................................................................CTCTAGCCCTTCCGTCTTTAGACGT................................... 25 0 3 0.67 2 2 0 0 0
.........................................................................................................TGTCAGGCTAACGCCTTCCCTTT................................................................... 23 0 3 0.67 2 2 0 0 0
........................................................................................................TTGTCAGGCTAACGCCTTGCCTTTCTG................................................................ 27 1 3 0.67 2 2 0 0 0
.........................................................................................................................................CTAGCCCTTCCGTCTTTAGACGTTT................................. 25 0 3 0.67 2 2 0 0 0
..........................................................................................................GTCAGGCTAACGCCTCCCCTTTCT................................................................. 24 1 3 0.67 2 2 0 0 0
...........................................................................................................TCAGGCTAACGCCTTCCCTTT................................................................... 21 0 3 0.67 2 0 2 0 0
........................................................................................................TTGTCAGGCTAACGCCTCCCCTTTCT................................................................. 26 1 3 0.67 2 2 0 0 0
.................................................CAGGCTCTAACCCGCCCAAG.............................................................................................................................. 20 0 2 0.50 1 0 1 0 0
........................................................................................................................TTCCCTTTCTGGTATCTCTAGCCCT.................................................. 25 0 2 0.50 1 1 0 0 0
................................................................CCAAGAAGGCTCACCGTAGCGCTC........................................................................................................... 24 0 2 0.50 1 0 1 0 0
.........................CATTGGTCTCGTGTTAATTCTTGTC................................................................................................................................................. 25 2 2 0.50 1 1 0 0 0
.......................................................................................................................CTTCCCTTTCTGGTATCTCTAGCCC................................................... 25 0 2 0.50 1 1 0 0 0
.............................................................................................................................................................................CACAACAATTCACAAGTTAC.. 20 0 2 0.50 1 1 0 0 0
...........................ATGGTCGCGTGTTAGTTCTTGTCAGGCT............................................................................................................................................ 28 3 2 0.50 1 1 0 0 0
........................GGATCGGTCTCGTGTTACTTCTTGTC................................................................................................................................................. 26 2 2 0.50 1 1 0 0 0
....................................................GCTCTAACCCGCCCAAGAAGGCTCA...................................................................................................................... 25 0 2 0.50 1 1 0 0 0
..........................................................................TCACCGTAGCGCTCACTAAAGT................................................................................................... 22 0 2 0.50 1 1 0 0 0
........................ATATCGGTCTCGTGTTAGTTCTTGTC................................................................................................................................................. 26 2 2 0.50 1 1 0 0 0
............................CGGTCTCGTGTTAGTTCTTGTCAGG.............................................................................................................................................. 25 0 2 0.50 1 1 0 0 0
........................................AGTTCTTGTCAGGCTCTAACCCGC................................................................................................................................... 24 0 2 0.50 1 1 0 0 0
.......................AGCATCGGTCTCGTGTTAGT........................................................................................................................................................ 20 1 2 0.50 1 1 0 0 0
...................................................................................CGCTCACTAAAGTAGCAGCCT........................................................................................... 21 0 2 0.50 1 1 0 0 0
...............................................................CCCAAGAAGGCTCACCGTCGCGCTCAC......................................................................................................... 27 1 2 0.50 1 1 0 0 0
..........................CTCGGTCTCGTGTTAGTTCTTGTC................................................................................................................................................. 24 1 2 0.50 1 1 0 0 0
............................TGGTCTCGTGTTAGTTCTTGTC................................................................................................................................................. 22 1 2 0.50 1 1 0 0 0
....................................................................AAAGGCTCACCGTAGCGCTCACTAA...................................................................................................... 25 1 2 0.50 1 1 0 0 0
.................................................AAGGCTCTAACCCGCCCAAGAAGGCTCAC..................................................................................................................... 29 1 2 0.50 1 0 1 0 0
....................................................................GAAGGCTCACCGTAGCGCTCACTAAA..................................................................................................... 26 0 2 0.50 1 1 0 0 0
..............................................................GCCCAAGAAGGCTCACCGTAGCGCTCAC......................................................................................................... 28 0 2 0.50 1 0 0 0 1
................................CTCGTGTTAGTTCTTGTC................................................................................................................................................. 18 0 2 0.50 1 0 1 0 0
.................................TCGTGTTAGTTCTTGTCAGGCTCTA......................................................................................................................................... 25 0 2 0.50 1 1 0 0 0
...........................................................................CACCGTAGCGCTCACTAAAGT................................................................................................... 21 0 2 0.50 1 1 0 0 0
.................................................................AAAGAAGGCTCACCGTAGCGCTCAC......................................................................................................... 25 1 2 0.50 1 1 0 0 0
....................................................................GAAGGCTCACCGTAGCGCTCACTAA...................................................................................................... 25 0 2 0.50 1 1 0 0 0
.......................................................................GGCTCGCCGTAGCGCTCACTAAAGTA.................................................................................................. 26 1 2 0.50 1 1 0 0 0
..........................................................................................................................CCCTTTCTTGTATCTCTAGCCCTTCCGT............................................. 28 1 2 0.50 1 1 0 0 0
.........................................GTTCTTGTCAGGCTCTAACCCGCCC................................................................................................................................. 25 0 2 0.50 1 1 0 0 0
..................................................................................................................................GGTATCTCTAGCCCTTCCGTCTT.......................................... 23 0 2 0.50 1 1 0 0 0
......................................................................................................................................................................TATACACCACAACAATTCACAAG...... 23 0 2 0.50 1 1 0 0 0
.........................CATCGGTCTCGTGTTAGTTCTTG................................................................................................................................................... 23 0 2 0.50 1 1 0 0 0
........................GCATCGGTCTCGTGTTACTTCTTGTC................................................................................................................................................. 26 1 2 0.50 1 1 0 0 0
.......................................................................GGCTCACCGTAGCGCTCACTAAAG.................................................................................................... 24 0 2 0.50 1 1 0 0 0
........................ACATCGGTCTCGTGTTAGTTCTTGTC................................................................................................................................................. 26 1 2 0.50 1 1 0 0 0
..................................................................AAGAAGGCTCACCGTAGCGCTCACT........................................................................................................ 25 0 2 0.50 1 1 0 0 0
.....................................................CTCTAACCCGCCCAAGAAGGCTCACC.................................................................................................................... 26 0 2 0.50 1 1 0 0 0
...........................AAGGTCTCGTGTTAGTTCTTGT.................................................................................................................................................. 22 2 2 0.50 1 1 0 0 0
............................CGGTCTCGTTTTAGTTCTTGTC................................................................................................................................................. 22 1 2 0.50 1 1 0 0 0
............................AGGTCTCGTGTTAGTTCTTGTC................................................................................................................................................. 22 1 2 0.50 1 1 0 0 0
.................................................................CAAGAAGGCTCACCGTAGCGCTCACT........................................................................................................ 26 0 2 0.50 1 1 0 0 0
.........................CATCGGTCTCGTGTTAGTTCTTGTA................................................................................................................................................. 25 1 2 0.50 1 0 0 1 0
...........................................................................................................GCAGGCTAACGCCTTCCCTTTCTGGTAT............................................................ 28 1 2 0.50 1 0 1 0 0
........................................................................GCTCACCGTAGCGCTCACCAAAGT................................................................................................... 24 1 2 0.50 1 1 0 0 0
....................................................................GATGGCTCACCGTAGCGCTCACTA....................................................................................................... 24 1 2 0.50 1 1 0 0 0
...................................................................AGAAGGCTCACCGTAGCGCTCAC......................................................................................................... 23 0 2 0.50 1 1 0 0 0
...................................................................AGGAGGCTCACCGTAGCGCTCACTA....................................................................................................... 25 1 2 0.50 1 0 0 1 0
.........................CATCTGTCTCGTGTTAGTTCTTGTA................................................................................................................................................. 25 2 2 0.50 1 0 0 1 0
.....................ATCGCATCGGTCTCGTGTTAGTTCTTGT.................................................................................................................................................. 28 0 2 0.50 1 1 0 0 0
........................................................TAACCCGCCCAAGAAGGCTCACCGT.................................................................................................................. 25 0 2 0.50 1 1 0 0 0
.......................CGCATCGGTCTCGTGTTAATTCTTGTC................................................................................................................................................. 27 1 2 0.50 1 1 0 0 0
...............................AATCGTGTTAGTTCTTGTC................................................................................................................................................. 19 2 2 0.50 1 1 0 0 0
.............................GGTCTCGTGTTAGTTCTTTT.................................................................................................................................................. 20 1 2 0.50 1 1 0 0 0
............................CGGTCTCGAGTTAGTTCTTGTC................................................................................................................................................. 22 1 2 0.50 1 1 0 0 0
.........................TTTCGGTCTCGTGTTAGTTCTTGTC................................................................................................................................................. 25 2 2 0.50 1 1 0 0 0
............................CGGTCTCGTGTTAGTTGTTGTCAGG.............................................................................................................................................. 25 1 2 0.50 1 1 0 0 0
.........................AATCGGTCTCGTGTTAGTTCTTGT.................................................................................................................................................. 24 1 2 0.50 1 1 0 0 0
....................................................................GAAGGCTCACCATAGCGCTCACTA....................................................................................................... 24 1 2 0.50 1 0 1 0 0
........................GCATCGGTCTCGTGTTAATTCTTGTC................................................................................................................................................. 26 1 2 0.50 1 1 0 0 0
...........................TCGGTCTCGTGCTAGTTCTTGTC................................................................................................................................................. 23 1 2 0.50 1 0 0 1 0
..........................................AACTTGTCAGGCTCTAACCCGCCCAA............................................................................................................................... 26 2 2 0.50 1 1 0 0 0
.......................................................................GGCTCACCGTAGCGCTCACT........................................................................................................ 20 0 2 0.50 1 1 0 0 0
...........................ACGGTCTCGTGTTAGTTCTTGT.................................................................................................................................................. 22 1 2 0.50 1 1 0 0 0
................................................TCAGGCTCTAACCCGCCCAAGAAGGCT........................................................................................................................ 27 0 2 0.50 1 0 1 0 0
.................................................CAGGCTCTAACCCGCCCAAGGAGGCT........................................................................................................................ 26 1 2 0.50 1 0 1 0 0
..........................................................................................................................CCCTTTCTGGTATCTCTAGCCCTTCCG.............................................. 27 0 2 0.50 1 1 0 0 0
.................................................CAGGCTCTAACCCGCCCAAGAAGGCTCAG..................................................................................................................... 29 1 2 0.50 1 0 1 0 0
.......................................TAGTTCTTGTCAGGCTCTAACCCGCC.................................................................................................................................. 26 0 2 0.50 1 1 0 0 0
............................................................................ACCGTAGCGCTCACTAAAGTAGCAGC............................................................................................. 26 0 2 0.50 1 1 0 0 0
..........................ATCGGTCTCGTGTTGGTTCTTGT.................................................................................................................................................. 23 1 2 0.50 1 1 0 0 0
................................................................CCAAGCAGGCTCACCGTAGCGCTCACTA....................................................................................................... 28 1 2 0.50 1 0 1 0 0
.................................................................................AGCGCTCACTAAAGTAACAGCCTTT......................................................................................... 25 1 2 0.50 1 1 0 0 0
.................................................CAGGCTCTAATCCGCCCAAGAAGGCT........................................................................................................................ 26 1 2 0.50 1 0 1 0 0
...............................................................................GTAGCGCTCACTAAAGTAGCAGCC............................................................................................ 24 0 2 0.50 1 1 0 0 0
...........................TCGGTCTCGTGTTAGTTCTT.................................................................................................................................................... 20 0 2 0.50 1 1 0 0 0
.............................GGTCTCGTGTTAGTTCTTGTCAGGC............................................................................................................................................. 25 0 2 0.50 1 1 0 0 0
.............................................................................................................................................................CGTTTTTATTATACACCACAACAATT............ 26 0 2 0.50 1 1 0 0 0
.....................................GTTAGTTCTTGTCAGGCTCT.......................................................................................................................................... 20 0 2 0.50 1 1 0 0 0
.......................AGCATCGGTCTCGTGTTAGTTCTTGT.................................................................................................................................................. 26 1 2 0.50 1 1 0 0 0
......................................................................AGGCTCACCGTAGCGCTCACT........................................................................................................ 21 0 2 0.50 1 1 0 0 0
.....................ATCGCATCGGTCTCGTGTTAGTT....................................................................................................................................................... 23 0 2 0.50 1 1 0 0 0
.....................................................................AAGGCTCACCGTAGCGCTCACT........................................................................................................ 22 0 2 0.50 1 1 0 0 0
............................................................................................................CAGGCTAACGCCTTCCCTTTCTGG............................................................... 24 0 2 0.50 1 1 0 0 0
.............................................................CGCCCAAGAAGGCTCACCGTA................................................................................................................. 21 0 2 0.50 1 0 0 1 0
.........................CATCGGTCTCGCGTTAGTTCTTGTC................................................................................................................................................. 25 1 2 0.50 1 1 0 0 0
.................................................CAGGCTCTAACCCGCCCAAGAAGGC......................................................................................................................... 25 0 2 0.50 1 1 0 0 0
..................................................................................................................................GGTATCTCTAGCCCTTCCGT............................................. 20 0 2 0.50 1 1 0 0 0
.........................................................AACCCGCCCAAGAAGGCTCACCGT.................................................................................................................. 24 0 2 0.50 1 1 0 0 0
.........................................................................CTCACCGTAGCGCTCACTAAAGT................................................................................................... 23 0 2 0.50 1 1 0 0 0
........................................................................GCTCACCGTAGCGCTCACTAAA..................................................................................................... 22 0 2 0.50 1 1 0 0 0
.................................................................................AGCGCTCACTAAAGTAGCAGCCTT.......................................................................................... 24 0 2 0.50 1 1 0 0 0
......................................................................................................................................................CTTTAGACGTTTTTATTATACACCAC................... 26 0 2 0.50 1 1 0 0 0
.................................................................CAAGAAGGCTCACCGTAGAGCTCACTA....................................................................................................... 27 1 2 0.50 1 1 0 0 0
............................................................CCGCCCAAGAAGGCTCACCGTAGCGCTC........................................................................................................... 28 0 2 0.50 1 1 0 0 0
.........................................GTTCTTGTCAGGCTCTAACCCGCC.................................................................................................................................. 24 0 2 0.50 1 1 0 0 0
.....................................GGTAGTTCTTGTCAGGCTCTAACCC..................................................................................................................................... 25 1 2 0.50 1 0 1 0 0
................................................................CCAAGAAGGCTCACCGTAGCG.............................................................................................................. 21 0 2 0.50 1 1 0 0 0
..............................GTCTCGTGTTAGTTCTTGTCAGGCTCTAA........................................................................................................................................ 29 0 2 0.50 1 1 0 0 0
.........................CAGCGGTCTCGTGTTAGTTCTTGTC................................................................................................................................................. 25 1 2 0.50 1 0 1 0 0
..................................CGTGTTAGTTCTTGTCAGGCTCTA......................................................................................................................................... 24 0 2 0.50 1 1 0 0 0
..............................................................................................................................TTCTGGTATCTCTAGCCCTTCCGTCT........................................... 26 0 2 0.50 1 1 0 0 0
......................TCGCATCGGTCTCGTGTTAGTT....................................................................................................................................................... 22 0 2 0.50 1 1 0 0 0
...........................................................................................................................................................AACGTTTTTATTATACACCACAACAATT............ 28 1 2 0.50 1 1 0 0 0
........................GCATCGGTCTCGTGTTAGTTCTTTC.................................................................................................................................................. 25 2 2 0.50 1 1 0 0 0
..........................ATCGGTCTCGTGTTACTTCTTGTC................................................................................................................................................. 24 1 2 0.50 1 1 0 0 0
.....................ATCGCATCGGTCTCGTGTGAGTTCTTG................................................................................................................................................... 27 1 2 0.50 1 1 0 0 0
..........................ATCGGTCTCGTGTTATTTCTTGTC................................................................................................................................................. 24 1 2 0.50 1 1 0 0 0
...........................TCGGTCTCGTGTTAATTCTTGTC................................................................................................................................................. 23 1 2 0.50 1 1 0 0 0
.................................................CAGGCTCTAACCCGCCCAAGAAGGCTCAC..................................................................................................................... 29 0 2 0.50 1 0 1 0 0
...................................................................AGAAGGCTCACCGTAGCGGTCACTAAA..................................................................................................... 27 1 2 0.50 1 1 0 0 0
............................CGGTCTCGTGTTAGTTCTTGTCG................................................................................................................................................ 23 1 2 0.50 1 1 0 0 0
..........................ATCGGTCTCGTGTTCGTTCTTGT.................................................................................................................................................. 23 1 2 0.50 1 1 0 0 0
.....................................GTTAGTTCTTGTCAGGCTGTAACCCGC................................................................................................................................... 27 1 2 0.50 1 1 0 0 0
............................................CTTTTCAGGCTCTAACCCGCCCAAG.............................................................................................................................. 25 1 2 0.50 1 1 0 0 0
.................................................CAGGCTCTAACCCGCCCTAGAAGGCT........................................................................................................................ 26 1 2 0.50 1 1 0 0 0
................................CTCGTGTTAGTTCTTGACAGGCTCT.......................................................................................................................................... 25 1 2 0.50 1 1 0 0 0
..................................................................................................................................GGTATCTCTAGCCCTTCCGTCT........................................... 22 0 2 0.50 1 1 0 0 0
.......................CGCATCGGTCTCGTGTGAGTTCTTG................................................................................................................................................... 25 1 2 0.50 1 1 0 0 0
................................................................CCAAGAGGGCTCACCGTAGCGCTCACTA....................................................................................................... 28 1 2 0.50 1 1 0 0 0
............................................CTTGTCAGGCTCTAACCCGCCCAAG.............................................................................................................................. 25 0 2 0.50 1 1 0 0 0
......................................................................AGGCTCACCGTAGCGCTCACTAAAC.................................................................................................... 25 1 2 0.50 1 1 0 0 0
......................AAACATCGGTCTCGTGTTAGTTCTTGTC................................................................................................................................................. 28 3 2 0.50 1 1 0 0 0
........................................................................TCTCACCGTAGCGCTCACTAAA..................................................................................................... 22 1 2 0.50 1 1 0 0 0
..................................................GGGCTCTAACCCGCCCAAGAAGGCT........................................................................................................................ 25 1 2 0.50 1 0 1 0 0
............................................................................................................CAGGCTAACGCCTTCCCTTTCTGGT.............................................................. 25 0 2 0.50 1 1 0 0 0
.................................................................TAAGAAGGCTCACCGTAGCGCTCACTA....................................................................................................... 27 1 2 0.50 1 1 0 0 0
.......................TGCATCGGTCTCGTGTTAGTTCTTGT.................................................................................................................................................. 26 1 2 0.50 1 0 0 1 0
.........................................................................CTCACCGTAGCGCTCACTAAAGTAG................................................................................................. 25 0 2 0.50 1 1 0 0 0
...............................................................CCCAAGAAGGCTCACCGTAGCGCTCACT........................................................................................................ 28 0 2 0.50 1 1 0 0 0
..................................................AGGCTCTAACCCGCCCAA............................................................................................................................... 18 0 2 0.50 1 1 0 0 0
.................................TCGTGTTAGTTCCTGTCAGGCTCTA......................................................................................................................................... 25 1 2 0.50 1 0 1 0 0
............................CGGTCTCGTGTTATTTCTTGTC................................................................................................................................................. 22 1 2 0.50 1 1 0 0 0
........................................................................ACTCACCGTAGCGCTCACTAAAGT................................................................................................... 24 1 2 0.50 1 1 0 0 0
..................................................................AAGAAGGCTCACCGTAGCGCTCAC......................................................................................................... 24 0 2 0.50 1 1 0 0 0
.....................................................................AAGGCTCACCGTAGCGATCACTAAA..................................................................................................... 25 1 2 0.50 1 1 0 0 0
......................................................................................................................................................................TATACACCACAACAATTCACAAGTT.... 25 0 2 0.50 1 1 0 0 0
........................................................................GCTCACCGTAGCGCTCACTAAAGT................................................................................................... 24 0 2 0.50 1 1 0 0 0
.......................................................CTAACCCGCCCAAGAAGGCTCAC..................................................................................................................... 23 0 2 0.50 1 1 0 0 0
...................................................................................................................................................................TATTATACACCACAACAATTCACAAGT..... 27 0 2 0.50 1 1 0 0 0
.........................................................................................................................TCCCTTTCTGGTATCTCTAGCCCTT................................................. 25 0 2 0.50 1 1 0 0 0
..................................................................................................................................GGTATCTCTAGCCCTTCCGTC............................................ 21 0 2 0.50 1 1 0 0 0
..........................ATCGGTCTCGTGTTAGTT....................................................................................................................................................... 18 0 2 0.50 1 1 0 0 0
.................................................CAGGCTCTAACCCGCCCGAGAAGGCTCAC..................................................................................................................... 29 1 2 0.50 1 0 1 0 0
...........................................................................CACCGTAGCGCTCACTAAAGTAGCAGCC............................................................................................ 28 0 2 0.50 1 1 0 0 0
.......................CGCATCGGTCTCGTGTTGGTTCTTGT.................................................................................................................................................. 26 1 2 0.50 1 1 0 0 0
...................................................................AGAAGGCTCACCGTAGCGATCACT........................................................................................................ 24 1 2 0.50 1 1 0 0 0
.............................GGTCTCGTGTTAGTTCTTGTCAGGCTC........................................................................................................................................... 27 0 2 0.50 1 1 0 0 0
.......................................................................GGCTCACCGTAGAGCTCACTA....................................................................................................... 21 1 2 0.50 1 1 0 0 0
...........................................................................................................TCAGGCTAACGCCTTCCCTTTCTGGT.............................................................. 26 0 2 0.50 1 1 0 0 0
..................................................................................................................................GGTATCTCTAGCCCTTCCGTCTTT......................................... 24 0 2 0.50 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droPer2 scaffold_190:30524-30718 + dpe_303 GCGAGCCTAGGAAGGGCTATGTAGCGTAGCCAGAGCACAATCAAGAACAGTCCGAGATTGGGCGGGTTCTTCCGAGTGGCATCGCGAGTGATTTCATCGTCGGAAACAGTCCGATTGCGGAAGGGAAAGACCATAGAGATCGGGAAGGCAGAAATCTGCAAAAATAATATGTGGTGTTGTTAAGTGTTCAATGTT
dp5 Unknown_group_249:16155-16349 - GCGAGCCTAGGAAGGGCTATATAGCGTGGCCAGAGCACAATCAAGAACAGTCCGAGATTGGGCGGGTTCTTCCGAGTGGCATCGCGAGTGATTTCATCGTCGGAAACAGTCCGATTGCGGAAGGGAAAGACCATAGAGATCGGGAAGGCAGAAATCTGCAAAAATAATATGTGGTGTTGTTAAGTGTTCAATGTT
droWil2 scf2_1100000004820:37080-37088 - T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAATTTT
droGri2 scaffold_3383:303-318 + T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAATTTTTAATTTT
droEre2 scaffold_1373:3474-3517 + A--------------------------------------------------------------------------------------------------------------------------------AAGACAGAAAGGCGGAAGGGAGATATTTGCCAAAATAATATGT-----------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droPer2
GCGAGCCTAGGAAGGGCTATGTAGCGTAGCCAGAGCACAATCAAGAACAGTCCGAGATTGGGCGGGTTCTTCCGAGTGGCATCGCGAGTGATTTCATCGTCGGAAACAGTCCGATTGCGGAAGGGAAAGACCATAGAGATCGGGAAGGCAGAAATCTGCAAAAATAATATGTGGTGTTGTTAAGTGTTCAATGTTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................................................................................AAGGGAAAGACCATAGAGATCGGG...................................................24213.50270252000
........................................................................................................................AAGGGAAAGACCATAGAGATCGG....................................................2329.00180180000
........................................................................................................................AAGGGAAAGACCATAGAGATCGGGA..................................................2528.50170170000
........................................TCAAGAACAGTCCGAGATTGGGC....................................................................................................................................2328.50171151000
........................................TCAAGAACAGTCCGAGATTGGG.....................................................................................................................................2228.50171160000
........................................TCAAGAACAGTCCGAGATTGGGCGG..................................................................................................................................2528.00160160000
........................................TCAAGAACAGTCCGAGATTGGGCG...................................................................................................................................2426.00120120000
........................................TCAAGAACAGTCCGAGATTGG......................................................................................................................................2125.0010091000
..........................................................................................................................................................TCTGCAAAAATAATATGTGGTGTTGT...............2624.509090000
.........................................................................................................................AGGGAAAGACCATAGAGATCGG....................................................2224.008080000
........................................................................................................................AAGGGAAAGACCATAGAGATCG.....................................................2223.507160000
.........................................................................................................................AGGGAAAGACCATAGAGATCGGGA..................................................2422.505050000
........................................TCAAGAACAGTCCGAGATTGGGCGGG.................................................................................................................................2622.505050000
.........................................................................................................................AGGGAAAGACCATAGAGATCGGGAAG................................................2622.004040000
........................................................................................................................AAGGGAAAGACCATAGAGATCGGGAAG................................................2722.004130000
........................................................................................................................AAGGGAAAGACCATAGAGATCGGGAA.................................................2622.004040000
........................................................................................................................AAGGGAAAGACCATAGAGATC......................................................2121.503210000
.........................................CAAGAACAGTCCGAGATTGGG.....................................................................................................................................2121.503030000
..................................................TCCGAGATTGGGCGGGTTCTTCCGAG.......................................................................................................................2621.002020000
.......................................ATCAAGAACAGTCCGAGATTGGG.....................................................................................................................................2321.002020000
.................TATGTAGCGTAGCCAGAGCAC.............................................................................................................................................................2111.001010000
.................TATGTAGCGTAGCCAGAGCACAA...........................................................................................................................................................2311.001010000
..................................................................................CGCGAGTGATTTCATCGTCGGA...........................................................................................2221.002020000
........................................TCAAGAACAGTCCGAGATTGGGCGGGT................................................................................................................................2721.002020000
.........................................................................................................................AGGGAAAGACCATAGAGATCG.....................................................2121.002020000
.................TATGTAGCGTAGCCAGAGCACAATC.........................................................................................................................................................2511.001010000
........................................TCAAGAACAGTCCGAGATTG.......................................................................................................................................2020.501010000
...........................................................................................................................................................CTGCAAAAATAATATGTGGTGTTGT...............2520.501010000
.........................................................................................................................AGGGAAAGACCATAGAGATCGGG...................................................2320.501010000
..........................................................................................................................................................................GTGGTGTTGTTAAGTGTTCA.....2020.501010000
.......................................ATCAAGAACAGTCCGAGATTGGGC....................................................................................................................................2420.501010000
.........................................................................................................................AGGGAAAGACCATAGAGATCGGA...................................................2320.501100000
...............................................................................CATCGCGAGTGATTTCATCG................................................................................................2020.501100000
.........................................CAAGAACAGTCCGAGATTGGGCGG..................................................................................................................................2420.501010000
...................................................................TCTTCCGAGTGGCATCGCGAGTGAT.......................................................................................................2520.501010000
.......................................................................................................................................................................TATGTGGTGTTGTTAAGTGTT.......2120.501010000
.......................................................................................................................................................................TATGTGGTGTTGTTAAGTGTTCAATGT.2720.501010000
............................................................................TGGCATCGCGAGTGATTTCATCGTCG.............................................................................................2620.501010000
............................................................................TGGCATCGCGAGTGATTTCATCGTC..............................................................................................2520.501010000
..................................GCACAATCAAGAACAGTCCGAG...........................................................................................................................................2220.501001000
.............................................................................................................TCCGATTGCGGAAGGGAAAGACCATA............................................................2620.501010000
........................................TCAAGAACAGTCCGAGATTGGGT....................................................................................................................................2320.501001000
........................................................................................................................AAGGGAAAGACCATAGAGAT.......................................................2020.501100000
................................................................................ATCGCGAGTGATTTCATCGTCG.............................................................................................2220.501100000
..........................................................................................................................GGGAAAGACCATAGAGATCGG....................................................2120.501010000
...........................................................................................................................................................CTGCAAAAATAATATGTGGTGTTG................2420.501010000
.........................................CAAGAACAGTCCGAGATTG.......................................................................................................................................1920.501010000
.............................................................................GGCATCGCGAGTGATTTCATCGTCGGAA..........................................................................................2820.501100000
........................................TCAAGAACAGTCCGAGATTGGGAA...................................................................................................................................2420.501010000
..........................................................................................................................GGGAAAGACCATAGAGATC......................................................1920.501010000
...................................................................TCTTCCGAGTGGCATCGCGAGTG.........................................................................................................2320.501010000
..........................................................TGGGCGGGTTCTTCCGAGTGGC...................................................................................................................2220.501010000
.........................................CAAGAACAGTCCGAGATTGGGC....................................................................................................................................2220.501010000
...................................................................................GCGAGTGATTTCATCGTCGGAAAC........................................................................................2420.501010000
.................................................................................TCGCGAGTGATTTCATCGTCGGAAA.........................................................................................2520.501010000
.................................................................................................................................................................AAATAATATGTGGTGTTGTTAAGT..........2420.501010000
............................................................................................................................................................TGCAAAAATAATATGTGGTGTTG................2320.501010000
...................................................................TCTTCCGAGTGGCATCGCGAGTGA........................................................................................................2420.501010000
...........................................................................................TTTCATCGTCGGAAACAGTCCGAT................................................................................2420.501010000
.........................................................................................................................AGGGAAAGACCATAGAGATCA.....................................................2120.501010000
..........................................................................................................................................................TCTGCAAAAATAATATGTGGTGTTG................2520.501010000
......................................................................TCCGAGTGGCATCGCGAGTG.........................................................................................................2020.501010000
..................................................................................CGCGAGTGATTTCATCGTCGGAAA.........................................................................................2420.501010000
......................................................................................AGTGATTTCATCGTCGGAAACAGTC....................................................................................2520.501010000
...................................................................TCTTCCGAGTGGCATCGCGAGT..........................................................................................................2220.501010000
...................................................................TCTTCCGAGTGGCATCGCGAG...........................................................................................................2120.501010000
........................................................................................................................AAGGGAAAGACCATAGAGATCGGGAT.................................................2620.501100000
........................................TCAAGAACAGTCCGAGATTGAA.....................................................................................................................................2220.501010000
.........................................................................................................................AGGGAAAGACCATAGAGATCGGGAAGG...............................................2720.501010000
..................................................TCCGAGATTGGGCGGGTTCTTCCGAGT......................................................................................................................2720.501010000
..........................TAGCCAGAGCACAATCAAGAACAGTC...............................................................................................................................................2620.501010000
....................................................................................................CGGAAACAGTCCGATTGCGGA..........................................................................2130.331010000
..............................................................................................CATCGTCGGAAACAGTCCGATTGC.............................................................................2430.331001000
.......................................................................................................AAACAGTCCGATTGCGGAAGG.......................................................................2130.331010000
...................................................................................................TCGGAAACAGTCCGATTGCGGAAGGGA.....................................................................2730.331010000
...................................................................................................TCGGAAACAGTCCGATTGCGGAAGGGAA....................................................................2830.331010000
dp5
GCGAGCCTAGGAAGGGCTATATAGCGTGGCCAGAGCACAATCAAGAACAGTCCGAGATTGGGCGGGTTCTTCCGAGTGGCATCGCGAGTGATTTCATCGTCGGAAACAGTCCGATTGCGGAAGGGAAAGACCATAGAGATCGGGAAGGCAGAAATCTGCAAAAATAATATGTGGTGTTGTTAAGTGTTCAATGTTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............................................................................................................................AAAGACCATAGAGATCGGGAAGG...............................................231237.00237022380303000
.............................................................................................................................AAAGACCATAGAGATCGGGAAGGC..............................................241104.0010418580107200
.............................................................................................................................AAAGACCATAGAGATCGGGAAG................................................22182.008208000200000
.........................................................................................................................AGGGAAAGACCATAGAGATCGG....................................................22147.0047031001001500
.........................................................................................................................AGGGAAAGACCATAGAGATCGGG...................................................23143.0043033000001000
..................................GCACAATCAAGAACAGTCCGAGA..........................................................................................................................................23239.507907610100100
.........................................................................................................................AGGGAAAGACCATAGAGATCGGGA..................................................24133.0033018000001500
..................................GCACAATCAAGAACAGTCCGAGAT.........................................................................................................................................24232.006406030100000
.........................................................................................................................AGGGAAAGACCATAGAGATCGGGAA.................................................25123.0023013000001000
.............................................................................................................................AAAGACCATAGAGATCGGGAAGGCA.............................................25122.002202200000000
.............................................................................................................................AAAGACCATAGAGATCGGGAA.................................................21119.001901810000000
.........................................................................................................................AGGGAAAGACCATAGAGATCGGGAAG................................................26117.001701500000200
..........................................................................................................................GGGAAAGACCATAGAGATCGGGAA.................................................24117.001701410000200
..........................................................................................................................GGGAAAGACCATAGAGATCGGGA..................................................23116.001601500000100
.................................................................................TCGCGAGTGATTTCATCGTCGGA...........................................................................................23215.503102110101700
..............................................................................................................................AAGACCATAGAGATCGGGAAGG...............................................22112.001201200000000
..........................................................................................................................GGGAAAGACCATAGAGATCGG....................................................21110.001001000000000
..........................................................................................................................GGGAAAGACCATAGAGATCGGG...................................................22110.001001000000000
.......................................ATCAAGAACAGTCCGAGATTGGG.....................................................................................................................................2329.501901200100600
.............................................................................................................................AAAGACCATAGAGATCGGGA..................................................2019.0090900000000
..................................GCACAATCAAGAACAGTCCGA............................................................................................................................................2129.001801500201000
..................................................................................CGCGAGTGATTTCATCGTCGGA...........................................................................................2228.501701700000000
..........................................................................................................................GGGAAAGACCATAGAGATCGGGAAG................................................2517.0070700000000
..................................GCACAATCAAGAACAGTCCGAGAA.........................................................................................................................................2426.501301210000000
.................................................................................TCGCGAGTGATTTCATCGTCGG............................................................................................2236.331901700100100
..............................................................................................................................AAGACCATAGAGATCGGGAAGGC..............................................2316.0060500000100
.............................................................................................................................AAAGACCATAGAGATCGGG...................................................1916.0060600000000
...........................................................................................................................GGAAAGACCATAGAGATCGGGAAGG...............................................2516.0060600000000
..................................................................................CGCGAGTGATTTCATCGTCGG............................................................................................2135.671701700000000
..................................GCACAATCAAGAACAGTCCG.............................................................................................................................................2025.501101000100000
.........................................................................................................................AGGGAAAGACCATAGAGATCG.....................................................2115.0050500000000
...........AAGGGCTATATAGCGTGG......................................................................................................................................................................1815.0050500000000
.......................................ATCAAGAACAGTCCGAGATTGGGC....................................................................................................................................2425.00100900100000
.................................................................GTTCTTCCGAGTGGCATCGCGA............................................................................................................2215.0050500000000
...................................................................TCTTCCGAGTGGCATCGCGAG...........................................................................................................2115.0050410000000
..................................GCACAATCAAGAACAGTCCGAG...........................................................................................................................................2225.001001000000000
.............................................................................................................................AAAGACCATAGAGATCGGGAAGGCAG............................................2615.0050500000000
........................................TCAAGAACAGTCCGAGATTGGGCGGGT................................................................................................................................2724.0080800000000
..................................................................................CGCGAGTGATTTCATCGTCGGAAACAG......................................................................................2724.0080800000000
........................................................................................................................AAGGGAAAGACCATAGAGATCGG....................................................2314.0040400000000
..................................................................................................................................CCATAGAGATCGGGAAGGCAGAAAT........................................2514.0040000000400
..............................................................................................................................AAGACCATAGAGATCGGGAAG................................................2114.0040400000000
...........................................................................................................................................TCGGGAAGGCAGAAATCTGCAAAA................................2414.0040000000400
...........................................................................................................................GGAAAGACCATAGAGATCGGGAAG................................................2414.0040400000000
..............................................................................................................................AAGACCATAGAGATCGGGAAGGCA.............................................2414.0040400000000
.......................................ATCAAGAACAGTCCGAGATTGG......................................................................................................................................2223.5070700000000
..................................................................................CGCGAGTGATTTCATCGTCGGAAAC........................................................................................2523.5070700000000
..................................................................................CGCGAGTGATTTCATCGTCGGAAACA.......................................................................................2623.5070700000000
..................................................................................CGCGAGTGATTTCATCGTCGGAAA.........................................................................................2423.5070700000000
........................................TCAAGAACAGTCCGAGATTGGG.....................................................................................................................................2223.0060500100000
...........AAGGGCTATATAGCGTGGC.....................................................................................................................................................................1913.0030300000000
..........................................................................................................................GGGAAAGACCATAGAGATCGGGAAA................................................2513.0030300000000
..................................................................................CGCGAGTGATTTCATCGTCGGAA..........................................................................................2323.0060500000100
..............................CAGAGCACAATCAAGAACAGTCC..............................................................................................................................................2323.0060600000000
...........................................................................................................................................TCGGGAAGGCAGAAATCTGCAAAAA...............................2513.0030000000300
.......................................................................................................................................GAGATCGGGAAGGCAGAAATCTG.....................................2313.0030300000000
...........................................................................................................................GGAAAGACCATAGAGATCGGGAA.................................................2313.0030300000000
...................................CACAATCAAGAACAGTCCGAGA..........................................................................................................................................2223.0060600000000
...................................................................TCTTCCGAGTGGCATCGCGA............................................................................................................2013.0030300000000
........................................TCAAGAACAGTCCGAGATTGGGC....................................................................................................................................2323.0060600000000
..........................................................TGGGCGGGTTCTTCCGAGTGGCAT.................................................................................................................2413.0030100000200
.................................................................................TCGCGAGTGATTTCATCGTCG.............................................................................................2132.6780600100100
..........................................................................................................................................................TCTGCAAAAATAATATGTGGTGTTGT...............2622.5050300000200
.......................................ATCAAGAACAGTCCGAGATTGGGCGG..................................................................................................................................2622.5050500000000
.................................................................................TCGCGAGTGATTTCATCGTCGGAA..........................................................................................2422.5050000000500
...................................................................................GCGAGTGATTTCATCGTCGGAAAC........................................................................................2422.5050300000200
..................................................................................CGCGAGTGATTTCATCGTCG.............................................................................................2032.3370600001000
..........................................................................................................................GGGAAAGACCATAGAGATCG.....................................................2012.0020200000000
............................................................................................................................................................TGCAAAAATAATATGTGGTGTTGT...............2422.0040300000100
..................................................TCCGAGATTGGGCGGGTTCTTCCGAG.......................................................................................................................2612.0020110000000
.........................................................................................................................AGGGAAAGACCATAGAGATCGGGAAA................................................2612.0020200000000
.............................................................................................................................AAAGACCATAGAGATCGGGAAA................................................2212.0020110000000
...................................CACAATCAAGAACAGTCCGAGAT.........................................................................................................................................2322.0040400000000
.......................................................................................................................................GAGATCGGGAAGGCAGAAATCTGC....................................2412.0020200000000
...........AAGGGCTATATAGCGTGGCCAGA.................................................................................................................................................................2312.0020200000000
..................................GCACAATCAAGAACAGTCCGAGATT........................................................................................................................................2522.0040400000000
...........................................................................................................................GGAAAGACCATAGAGATCGGG...................................................2112.0020200000000
.............................................................................................................................AAAGACCATAGAGATCGGGAAGGT..............................................2412.0020110000000
...................................................................................................................TGCGGAAGGGAAAGACCATAGAGA........................................................2422.0040300100000
...........................................................................................................................GGAAAGACCATAGAGATCGGGA..................................................2212.0020200000000
.........................................................................................................................AGGGAAAGACCATAGAGATCGGGAAGG...............................................2712.0020200000000
.................................................................................................................................ACCATAGAGATCGGGAAGGCAGA...........................................2312.0020000000200
..........................................................................................................................GGGAAAGACCATAGAGATCGGGAAGG...............................................2612.0020200000000
..............................CAGAGCACAATCAAGAACAGTCCGA............................................................................................................................................2521.5030300000000
........................................TCAAGAACAGTCCGAGATTGGGCGG..................................................................................................................................2521.5030300000000
.............................CCAGAGCACAATCAAGAACAGTCCG.............................................................................................................................................2521.5030300000000
................................................................................ATCGCGAGTGATTTCATCGTCGG............................................................................................2321.5030300000000
.......................................ATCAAGAACAGTCCGAGATTG.......................................................................................................................................2121.5030300000000
.................................................................................TCGCGAGTGATTTCATCGTCGGAAACA.......................................................................................2721.5030210000000
...........................................................................................................................................................CTGCAAAAATAATATGTGGTGTTGT...............2521.5030300000000
.............................CCAGAGCACAATCAAGAACAGTC...............................................................................................................................................2321.5030300000000
.............................................................................................TCATCGTCGGAAACAGTCCGATT...............................................................................2321.5030200000100
......................................................................................AGTGATTTCATCGTCGGAAACAGTC....................................................................................2521.5030200000100
.................................................................................TCGCGAGTGATTTCATCGTCGGAAAC........................................................................................2621.5030200000100
...............................AGAGCACAATCAAGAACAGTCC..............................................................................................................................................2221.5030300000000
......................................................................................AGTGATTTCATCGTCGGAAA.........................................................................................2021.5030000000300
......................................................................................AGTGATTTCATCGTCGGAAACAGT.....................................................................................2421.5030000000300
..................................GCACAATCAAGAACAGTCCGAGATTG.......................................................................................................................................2621.5030300000000
..................................GCACAATCAAGAACAGTCC..............................................................................................................................................1921.5030200100000
.....................................................................................GAGTGATTTCATCGTCGGAAACAG......................................................................................2421.5030100000200
..................................GCACAATCAAGAACAGTCCGAGATA........................................................................................................................................2521.5030000000300
.............................................................................GGCATCGCGAGTGATTTCATCGTC..............................................................................................2421.5030200000100
..............................CAGAGCACAATCAAGAACAGTCCGAG...........................................................................................................................................2621.5030300000000
...............................................CAGTCCGAGATTGGGCGGGTTCTTC...........................................................................................................................2511.0010100000000
..........................................................................................................................GGGAAAGACCATAGAGATCGGGAC.................................................2411.0010100000000
..........................................................................................................................GGGAAAGACCATAGAGATCGAAT..................................................2311.0010010000000
...................................................................TCTTCCGAGTGGCATCGCG.............................................................................................................1911.0010100000000
...............................................................................................................................AGACCATAGAGATCGGGAAGGC..............................................2211.0010100000000
.........................................................TTGGGCGGGTTCTTCCGAGTG.....................................................................................................................2111.0010100000000
..............................CAGAGCACAATCAAGAACAGTC...............................................................................................................................................2221.0020200000000
.........................................CAAGAACAGTCCGAGATTGGGC....................................................................................................................................2221.0020110000000
..................................................................................................................................CCATAGAGATCGGGAAGGC..............................................1911.0010010000000
..................................................TCCGAGATTGGGCGGGTTCTT............................................................................................................................2111.0010100000000
...........AAGGGCTATATAGCGTGGCCAGAGCAC.............................................................................................................................................................2711.0010100000000
...........AAGGGCTATATAGCGTGGCCAGAG................................................................................................................................................................2411.0010100000000
............................................................................................................................GAAAGACCATAGAGATCGGGAAGGCA.............................................2611.0010100000000
..........................................................TGGGCGGGTTCTTCCGAGTGA....................................................................................................................2111.0010100000000
............................................................................................................................GAAAGACCATAGAGATCGGGAAGG...............................................2411.0010100000000
.................................................................GTTCTTCCGAGTGGCATCGCGAGTGA........................................................................................................2611.0010100000000
.................................................................................................................................ACCATAGAGATCGGGAAGG...............................................1911.0010000100000
........................................TCAAGAACAGTCCGAGATTGG......................................................................................................................................2121.0020100100000
.................................AGCACAATCAAGAACAGTCC..............................................................................................................................................2021.0020110000000
......................................................................................................................GGAAGGGAAAGACCATAGAGATC......................................................2311.0010100000000
.........................................................TTGGGCGGGTTCTTCCGAGTGGC...................................................................................................................2311.0010100000000
......................................................................................AGTGATTTCATCGTCGGAAAC........................................................................................2121.0020200000000
...............................................................................................................................AGACCATAGAGATCGGGA..................................................1811.0010100000000
..........................................................................................................................GGGAAAGACCATAGAGATCGGA...................................................2211.0010100000000
.......................................................................................................................................GAGATCGGGAAGGCAGAAATCT......................................2211.0010100000000
.........................................................................................................................AGGGAAAGACCATAGAGATCGGGAAC................................................2611.0010100000000
................................................................................ATCGCGAGTGATTTCATCGTCGGA...........................................................................................2421.0020200000000
............................................................................................................................GAAAGACCATAGAGATCGG....................................................1911.0010100000000
..................................................................TTCTTCCGAGTGGCATCGCGA............................................................................................................2111.0010100000000
..........................................................................................................................................ATCGGGAAGGCAGAAATCTGC....................................2111.0010100000000
............AGGGCTATATAGCGTGGCCAGA.................................................................................................................................................................2211.0010100000000
..............................................................................................................................AAGACCATAGAGATCGGGAAGGA..............................................2311.0010100000000
........................................................................................TGATTTCATCGTCGGAAACAGTCCG..................................................................................2521.0020100000100
.................................................................GTTCTTCCGAGTGGCATCGCGAGTAT........................................................................................................2611.0010100000000
................................................................................................................................GACCATAGAGATCGGGAA.................................................1811.0010100000000
.............................................................................................................................AAAGACCATAGAGATCGGGAAGGCAGA...........................................2711.0010100000000
...............................................................................................................................AGACCATAGAGATCGGGAAGGCAGAAAT........................................2811.0010100000000
.................TATATAGCGTGGCCAGAGCACAAT..........................................................................................................................................................2411.0010000000100
...........AAGGGCTATATAGCGTGGCC....................................................................................................................................................................2011.0010100000000
...................................................................................................................TGCGGAAGGGAAAGACCATAGAG.........................................................2321.0020200000000
...................................................................TCTTCCGAGTGGCATCGCGAGT..........................................................................................................2211.0010000100000
........................................................................................................................AAGGGAAAGACCATAGAGATCGGGAAG................................................2711.0010100000000
...........................................................................................................................GGAAAGACCATAGAGATCGG....................................................2011.0010100000000
.......TAGGAAGGGCTATATAGCGTG.......................................................................................................................................................................2111.0010100000000
........................................................................................................................................AGATCGGGAAGGCAGAAATCTG.....................................2211.0010100000000
..............................CAGAGCACAATCAAGAACAGTCCG.............................................................................................................................................2421.0020200000000
................................................................................ATCGCGAGTGATTTCATCGTCGGAA..........................................................................................2521.0020000000200
.................................................GTCCGAGATTGGGCGGGTTCTTC...........................................................................................................................2311.0010100000000
...................................................................................GCGAGTGATTTCATCGTCGGAA..........................................................................................2221.0020000000200
.................................................................................................................................ACCATAGAGATCGGGAAGGC..............................................2011.0010100000000
.............................................................................................................................AAAGACCATAGAGATCGGGAAGT...............................................2311.0010100000000
................................................................................ATCGCGAGTGATTTCATCGTCG.............................................................................................2221.0020200000000
..................................................TCCGAGATTGGGCGGGTTCTTCCGAGT......................................................................................................................2711.0010100000000
..........................................................................................................................GGGAAAGACCATAGAGATCGGGAAGGC..............................................2711.0010100000000
........................................................................................................................................AGATCGGGAAGGCAGAAATCTGC....................................2311.0010100000000
......................AGCGTGGCCAGAGCACAATCAAGAA....................................................................................................................................................2511.0010100000000
..................................GCACAATCAAGAACAGTCCGAGAC.........................................................................................................................................2421.0020020000000
...........AAGGGCTATATAGCGTGGCCAGAGC...............................................................................................................................................................2511.0010100000000
....................................ACAATCAAGAACAGTCCGAGAT.........................................................................................................................................2221.0020200000000
...........................................................................................................................................TCGGGAAGGCAGAAATCTGCAAA.................................2311.0010100000000
........................................................................................................................AAGGGAAAGACCATAGAGATCGGGAA.................................................2611.0010100000000
.............................CCAGAGCACAATCAAGAACAGTCCGAG...........................................................................................................................................2721.0020200000000
.....................TAGCGTGGCCAGAGCACAATCAAGAAC...................................................................................................................................................2711.0010000000100
................CTATATAGCGTGGCCAGAGCACAAT..........................................................................................................................................................2511.0010100000000
...............................................CAGTCCGAGATTGGGCGGGTTCTT............................................................................................................................2411.0010100000000
..............................................................................................................................AAGACCATAGAGATCGGGAA.................................................2011.0010100000000
...............................................................................................................................AGACCATAGAGATCGGGAAG................................................2011.0010100000000
.........................................................................................................................................GATCGGGAAGGCAGAAATCTGCAA..................................2411.0010000000100
.....................................................................TTCCGAGTGGCATCGCGAGTG.........................................................................................................2111.0010100000000
...............................................................................................................................AGACCATAGAGATCGGGAAGG...............................................2111.0010100000000
..............GGCTATATAGCGTGGCCAGAGCA..............................................................................................................................................................2311.0010100000000
.............................................................................GGCATCGCGAGTGATTTCATCGTCGGA...........................................................................................2721.0020200000000
.......................................ATCAAGAACAGTCCGAGATTGGGCG...................................................................................................................................2521.0020200000000
........................................................................................................................AAGGGAAAGACCATAGAGATCG.....................................................2211.0010100000000
.....................................................................................................................................TAGAGATCGGGAAGGCAGAAA.........................................2111.0010000000100
.........................................CAAGAACAGTCCGAGATTGGGCGGGT................................................................................................................................2621.0020200000000
........................................................................................................................AAGGGAAAGACCATAGAGATCGGG...................................................2411.0010100000000
.............................................................................................................................AAAGACCATAGAGATCGGGAAGA...............................................2311.0010100000000
.............................................................................................................TCCGATTGCGGAAGGGAAAGAC................................................................2240.7530210000000
..................................................................................CGCGAGTGATTTCATCGTC..............................................................................................1930.6720200000000
.................................................................................TCGCGAGTGATTTCATCGTC..............................................................................................2030.6720200000000
...................................................................................GCGAGTGATTTCATCGTCGG............................................................................................2030.6720200000000
.................................AGCACAATCAAGAACAGTCCGAGATT........................................................................................................................................2620.5010010000000
..................................GCACAATCAAGAACAGTCCGAGT..........................................................................................................................................2320.5010100000000
..............................................ACAGTCCGAGATTGGGCGGGTT...............................................................................................................................2220.5010100000000
.............................................AACAGTCCGAGATTGGGCGGGTT...............................................................................................................................2320.5010100000000
..............................................................................................................................................................CAAAAATAATATGTGGTGTTG................2120.5010100000000
..................................................................................................GTCGGAAACAGTCCGATTGCGG...........................................................................2240.5020200000000
...................................................................................GCGAGTGATTTCATCGTCGGAAACAG......................................................................................2620.5010100000000
......................................................................TCCGAGTGGCATCGCGAGTGA........................................................................................................2120.5010100000000
...................................................................................................................TGCGGAAGGGAAAGACCATAGAGAT.......................................................2520.5010100000000
.......................................................................................................................................................................TATGTGGTGTTGTTAAGTGTTCAATG..2620.5010100000000
....................................................................................CGAGTGATTTCATCGTCGGAAACAGTCC...................................................................................2820.5010100000000
..................................................................................CGCGAGTGATTTCATCGTCGGAAAA........................................................................................2520.5010100000000
...............................................................................CATCGCGAGTGATTTCATCGTCG.............................................................................................2320.5010100000000
.................................AGCACAATCAAGAACAGTCCGAGAT.........................................................................................................................................2520.5010100000000
...................................................................................GCGAGTGATTTCATCGTCGGA...........................................................................................2120.5010100000000
.................................AGCACAATCAAGAACAGTCCG.............................................................................................................................................2120.5010010000000
..................................................................................CGCGAGTGATTTCATCGTCGGAAACAA......................................................................................2720.5010100000000
............................................................................................TTCATCGTCGGAAACAGTCCGATT...............................................................................2420.5010100000000
........................................TCAAGAACAGTCCGAGATTGGGCG...................................................................................................................................2420.5010100000000
.................................................................................TCGCGAGTGATTTCATCGTCGGAAAA........................................................................................2620.5010100000000
..............................................................................GCATCGCGAGTGATTTCATCG................................................................................................2120.5010100000000
............................GCCAGAGCACAATCAAGAACAGTCCGA............................................................................................................................................2720.5010100000000
........................................TCAAGAACAGTCCGAGATTGGGCAA..................................................................................................................................2520.5010100000000
................................GAGCACAATCAAGAACAGTCCGAG...........................................................................................................................................2420.5010100000000
.............................................................................................TCATCGTCGGAAACAGTCCGAT................................................................................2220.5010100000000
.........................................CAAGAACAGTCCGAGATTGGGCGGG.................................................................................................................................2520.5010100000000
...........................................................................................................AGTCCGATTGCGGAAGGG......................................................................1840.5020200000000
............................................................................................................................................................................GGTGTTGTTAAGTGTTCAATGT.2220.5010100000000
.............................CCAGAGCACAATCAAGAACAGTCCGAGA..........................................................................................................................................2820.5010001000000
...............................................CAGTCCGAGATTGGGCGGGTT...............................................................................................................................2120.5010100000000
..................................................................................CGCGAGTGATTTCATCGTCGGAAACAGT.....................................................................................2820.5010100000000
....................................................................................CGAGTGATTTCATCGTCGGAAACAG......................................................................................2520.5010000000100
........................................TCAAGAACAGTCCGAGATTGGGCGGGC................................................................................................................................2720.5010010000000
...................................................................................GCGAGTGATTTCATCGTCGGAAACAAA.....................................................................................2720.5010100000000
.............................................................................................................TCCGATTGCGGAAGGGAAAGACCATA............................................................2620.5010100000000
...................................................................................................................TGCGGAAGGGAAAGACCATAGAGATA......................................................2620.5010100000000
.......................................................................................GTGATTTCATCGTCGGAAACAGTC....................................................................................2420.5010100000000
.......................................ATCAAGAACAGTCCGAGATTGGGCGGGT................................................................................................................................2820.5010100000000
........................................TCAAGAACAGTCCGAGATTGGGA....................................................................................................................................2320.5010100000000
.................................................................................TCGCGAGTGATTTCATCGTCGGAAA.........................................................................................2520.5010100000000
............................................................................................................................................................TGCAAAAATAATATGTGGTGTTGTT..............2520.5010100000000
............................................................................................................................................................................GGTGTTGTTAAGTGTTCAATG..2120.5010100000000
....................................................................................CGAGTGATTTCATCGTCGGAAACA.......................................................................................2420.5010100000000
.........................................................................................GATTTCATCGTCGGAAACAGTCCG..................................................................................2420.5010000000100
.............................................................................................................................................................GCAAAAATAATATGTGGTGTTGT...............2320.5010100000000
..................................GCACAATCAAGAACAGTCCGAGAAA........................................................................................................................................2520.5010100000000
........................................................................................................................AAGGGAAAGACCATAGAG.........................................................1820.5010100000000
...........................................AGAACAGTCCGAGATTGGGC....................................................................................................................................2020.5010100000000
........................................TCAAGAACAGTCCGAGATT........................................................................................................................................1920.5010100000000
.............................CCAGAGCACAATCAAGAACAGTCC..............................................................................................................................................2420.5010100000000
......................................................................................................................GGAAGGGAAAGACCATAGAGAT.......................................................2220.5010100000000
.............................CCAGAGCACAATCAAGAACAG.................................................................................................................................................2120.5010100000000
................................GAGCACAATCAAGAACAGTCCGAGAT.........................................................................................................................................2620.5010000100000
...........................................AGAACAGTCCGAGATTGGGCGGGT................................................................................................................................2420.5010100000000
.........................................CAAGAACAGTCCGAGATTGGG.....................................................................................................................................2120.5010100000000
........................................................................................................................AAGGGAAAGACCATAGAGAA.......................................................2020.5010100000000
..................................GCACAATCAAGAACAGTCA..............................................................................................................................................1920.5010000100000
.................................AGCACAATCAAGAACAGTCCGA............................................................................................................................................2220.5010100000000
..............................................................................GCATCGCGAGTGATTTCATCGT...............................................................................................2220.5010100000000
...............................AGAGCACAATCAAGAACAGTCCG.............................................................................................................................................2320.5010100000000
............................................................................TGGCATCGCGAGTGATTTCATCGTCG.............................................................................................2620.5010100000000
...................................................................................................TCGGAAACAGTCCGATTGCGGAAGGG......................................................................2640.5020000000200
..........................................................................................................................................................TCTGCAAAAATAATATGTGGTGTTG................2520.5010100000000
.................................................................................................................................................................AAATAATATGTGGTGTTGTTAAG...........2320.5010000100000
...........................................................................................................................................................................TGGTGTTGTTAAGTGTTCAA....2020.5010000100000
.............................CCAGAGCACAATCAAGAACAGT................................................................................................................................................2220.5010100000000
.......................................ATCAAGAACAGTCCGAGATTGGGCGGG.................................................................................................................................2720.5010100000000
.....................................CAATCAAGAACAGTCCGAGA..........................................................................................................................................2020.5010100000000
...................................CACAATCAAGAACAGTCCGAG...........................................................................................................................................2120.5010100000000
..............................................................................................CATCGTCGGAAACAGTCCGATTGCG............................................................................2540.5020200000000
..............................................................................................................CCGATTGCGGAAGGGAAAGACCAT.............................................................2420.5010100000000
.............................................................................................................TCCGATTGCGGAAGGGAAAGACC...............................................................2320.5010100000000
.....CCTAGGAAGGGCTATATAGCA.........................................................................................................................................................................2120.5010000100000
........................................................................................................................................................................ATGTGGTGTTGTTAAGTGTTC......2120.5010000100000
..............................CAGAGCACAATCAAGAACAGT................................................................................................................................................2120.5010100000000
..................................................................................................GTCGGAAACAGTCCGATTGCGGAAGG.......................................................................2640.5020200000000
....................................................................................................................................................................TAATATGTGGTGTTGTTAAGTA.........2220.5010100000000
droWil2
T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAATTTTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droGri2
T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAATTTTTAATTTTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droEre2
A--------------------------------------------------------------------------------------------------------------------------------AAGACAGAAAGGCGGAAGGGAGATATTTGCCAAAATAATATGT-----------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/15/2015 at 03:11 PM